| Clone Name | rbags33p05 |
|---|---|
| Clone Library Name | barley_pub |
>F10A1_RAT (P50503) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 368 Score = 54.7 bits (130), Expect = 2e-07 Identities = 25/63 (39%), Positives = 41/63 (65%) Frame = -3 Query: 634 AQVGMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKIS 455 A GM +++I+++PEV A Q+P++ A D +QNP N+ KYQN+ +VM++ K+S Sbjct: 302 AMPGMAGMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLS 361 Query: 454 QIF 446 F Sbjct: 362 AKF 364
>F10A1_CHICK (Q5ZLF0) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 361 Score = 53.9 bits (128), Expect = 4e-07 Identities = 24/60 (40%), Positives = 39/60 (65%) Frame = -3 Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446 GM +++I+++PEV A Q+P++ A D +QNP N+ KYQN+ +VM + K+S F Sbjct: 298 GMAGMPGLNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAKF 357
>F10A1_PONPY (Q5RF31) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 369 Score = 52.4 bits (124), Expect = 1e-06 Identities = 23/60 (38%), Positives = 40/60 (66%) Frame = -3 Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446 GM +++I+++PEV A Q+P++ A D +QNP N+ KYQ++ +VM++ K+S F Sbjct: 306 GMAGMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKF 365
>F10A1_HUMAN (P50502) Hsc70-interacting protein (Hip) (Suppression of| tumorigenicity protein 13) (Putative tumor suppressor ST13) (Protein FAM10A1) (Progesterone receptor-associated p48 protein) (NY-REN-33 antigen) Length = 369 Score = 52.4 bits (124), Expect = 1e-06 Identities = 23/60 (38%), Positives = 40/60 (66%) Frame = -3 Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446 GM +++I+++PEV A Q+P++ A D +QNP N+ KYQ++ +VM++ K+S F Sbjct: 306 GMAGMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKF 365
>F10A1_MOUSE (Q99L47) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 371 Score = 52.0 bits (123), Expect = 2e-06 Identities = 23/60 (38%), Positives = 40/60 (66%) Frame = -3 Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446 GM +++I+++PEV A Q+P++ A D +QNP N+ KYQ++ +VM++ K+S F Sbjct: 308 GMAGMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKF 367
>F10A5_HUMAN (Q8NFI4) Protein FAM10A5| Length = 369 Score = 50.8 bits (120), Expect = 4e-06 Identities = 22/60 (36%), Positives = 39/60 (65%) Frame = -3 Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446 GM +++I+++PE A Q+P++ A D +QNP N+ KYQ++ +VM++ K+S F Sbjct: 306 GMAGMPGLNEILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKF 365
>STI1_YEAST (P15705) Heat shock protein STI1| Length = 589 Score = 40.4 bits (93), Expect = 0.005 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -3 Query: 619 TPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQI 449 TPEE + M +PEVA Q+P +Q+ + QNP + ++ + E VF KI + Sbjct: 526 TPEETYQRAMKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPE---VFKKIQTL 579
>STI1_SCHPO (Q9USI5) Heat shock protein sti1 homolog| Length = 591 Score = 32.0 bits (71), Expect = 1.7 Identities = 14/54 (25%), Positives = 28/54 (51%) Frame = -3 Query: 619 TPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKI 458 T EE +++I +PEV Q+P +Q + +NP ++++ + V K+ Sbjct: 529 TEEETMARIQKDPEVLGILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKL 582 Score = 29.6 bits (65), Expect = 8.4 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -3 Query: 637 FAQVG--MTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDV 470 FA++G ++ + + K+ +NPE A + + QNP +I+ ND +M V Sbjct: 130 FAKLGSQLSDPKFMEKLASNPETASLLADSAFMAKLQKIQQNPGSIMAELNDPRMMKV 187
>UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/60 (21%), Positives = 31/60 (51%) Frame = -3 Query: 661 SSPEVRQQFAQVGMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQE 482 S+P++ +Q ++++ + NPE++ NP I ++ ++NP + + +QE Sbjct: 191 SNPDLMRQLIMANPQMQQLIQR---NPEISHMLNNPNIMRQTLELARNPAMMQEMMRNQE 247 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,017,257 Number of Sequences: 219361 Number of extensions: 2068000 Number of successful extensions: 5588 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5387 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5586 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)