ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33p05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1F10A1_RAT (P50503) Hsc70-interacting protein (Hip) (Protein ST13... 55 2e-07
2F10A1_CHICK (Q5ZLF0) Hsc70-interacting protein (Hip) (Protein ST... 54 4e-07
3F10A1_PONPY (Q5RF31) Hsc70-interacting protein (Hip) (Protein ST... 52 1e-06
4F10A1_HUMAN (P50502) Hsc70-interacting protein (Hip) (Suppressio... 52 1e-06
5F10A1_MOUSE (Q99L47) Hsc70-interacting protein (Hip) (Protein ST... 52 2e-06
6F10A5_HUMAN (Q8NFI4) Protein FAM10A5 51 4e-06
7STI1_YEAST (P15705) Heat shock protein STI1 40 0.005
8STI1_SCHPO (Q9USI5) Heat shock protein sti1 homolog 32 1.7
9UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoske... 30 4.9

>F10A1_RAT (P50503) Hsc70-interacting protein (Hip) (Protein ST13 homolog)|
           (Protein FAM10A1)
          Length = 368

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 25/63 (39%), Positives = 41/63 (65%)
 Frame = -3

Query: 634 AQVGMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKIS 455
           A  GM     +++I+++PEV  A Q+P++  A  D +QNP N+ KYQN+ +VM++  K+S
Sbjct: 302 AMPGMAGMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLS 361

Query: 454 QIF 446
             F
Sbjct: 362 AKF 364



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>F10A1_CHICK (Q5ZLF0) Hsc70-interacting protein (Hip) (Protein ST13 homolog)|
           (Protein FAM10A1)
          Length = 361

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 24/60 (40%), Positives = 39/60 (65%)
 Frame = -3

Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446
           GM     +++I+++PEV  A Q+P++  A  D +QNP N+ KYQN+ +VM +  K+S  F
Sbjct: 298 GMAGMPGLNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAKF 357



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>F10A1_PONPY (Q5RF31) Hsc70-interacting protein (Hip) (Protein ST13 homolog)|
           (Protein FAM10A1)
          Length = 369

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 23/60 (38%), Positives = 40/60 (66%)
 Frame = -3

Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446
           GM     +++I+++PEV  A Q+P++  A  D +QNP N+ KYQ++ +VM++  K+S  F
Sbjct: 306 GMAGMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKF 365



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>F10A1_HUMAN (P50502) Hsc70-interacting protein (Hip) (Suppression of|
           tumorigenicity protein 13) (Putative tumor suppressor
           ST13) (Protein FAM10A1) (Progesterone
           receptor-associated p48 protein) (NY-REN-33 antigen)
          Length = 369

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 23/60 (38%), Positives = 40/60 (66%)
 Frame = -3

Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446
           GM     +++I+++PEV  A Q+P++  A  D +QNP N+ KYQ++ +VM++  K+S  F
Sbjct: 306 GMAGMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKF 365



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>F10A1_MOUSE (Q99L47) Hsc70-interacting protein (Hip) (Protein ST13 homolog)|
           (Protein FAM10A1)
          Length = 371

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 40/60 (66%)
 Frame = -3

Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446
           GM     +++I+++PEV  A Q+P++  A  D +QNP N+ KYQ++ +VM++  K+S  F
Sbjct: 308 GMAGMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKF 367



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>F10A5_HUMAN (Q8NFI4) Protein FAM10A5|
          Length = 369

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 22/60 (36%), Positives = 39/60 (65%)
 Frame = -3

Query: 625 GMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQIF 446
           GM     +++I+++PE   A Q+P++  A  D +QNP N+ KYQ++ +VM++  K+S  F
Sbjct: 306 GMAGMPGLNEILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKF 365



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>STI1_YEAST (P15705) Heat shock protein STI1|
          Length = 589

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = -3

Query: 619 TPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKISQI 449
           TPEE   + M +PEVA   Q+P +Q+ +    QNP  + ++  + E   VF KI  +
Sbjct: 526 TPEETYQRAMKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPE---VFKKIQTL 579



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>STI1_SCHPO (Q9USI5) Heat shock protein sti1 homolog|
          Length = 591

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = -3

Query: 619 TPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDVFMKI 458
           T EE +++I  +PEV    Q+P +Q  +    +NP  ++++  +  V     K+
Sbjct: 529 TEEETMARIQKDPEVLGILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKL 582



 Score = 29.6 bits (65), Expect = 8.4
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -3

Query: 637 FAQVG--MTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQEVMDV 470
           FA++G  ++  + + K+ +NPE A    +      +    QNP +I+   ND  +M V
Sbjct: 130 FAKLGSQLSDPKFMEKLASNPETASLLADSAFMAKLQKIQQNPGSIMAELNDPRMMKV 187



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>UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)|
           (PLIC-1)
          Length = 582

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/60 (21%), Positives = 31/60 (51%)
 Frame = -3

Query: 661 SSPEVRQQFAQVGMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDQE 482
           S+P++ +Q        ++++ +   NPE++    NP I    ++ ++NP  + +   +QE
Sbjct: 191 SNPDLMRQLIMANPQMQQLIQR---NPEISHMLNNPNIMRQTLELARNPAMMQEMMRNQE 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,017,257
Number of Sequences: 219361
Number of extensions: 2068000
Number of successful extensions: 5588
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5586
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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