ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags34d17 |
|---|---|
| Clone Library Name | barley_pub |
>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3| Length = 244 Score = 309 bits (792), Expect = 5e-84 Identities = 145/190 (76%), Positives = 168/190 (88%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y +++EL+QLKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIF Sbjct: 55 KEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIF 114 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NGVFLKVNKATINMLRRVEPYV YGYPNLKSV+ELIYKRG+GKLN QR LT+N ++++G Sbjct: 115 NGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQG 174 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRED 170 LGKH IIC+ED++HEI+TVGPHFKEANNFLWPF KRNHYVEGGDAGNRE+ Sbjct: 175 LGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNREN 234 Query: 169 YINQLVRRMN 140 +IN+LVRRMN Sbjct: 235 FINELVRRMN 244
>RL72_ARATH (P60039) 60S ribosomal protein L7-2| Length = 242 Score = 308 bits (790), Expect = 9e-84 Identities = 145/190 (76%), Positives = 167/190 (87%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y +D EL++LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIF Sbjct: 53 KEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIF 112 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NGVFLKVNKAT+NMLRRVEPYV YGYPNLKSV+ELIYKRGYGKLN QRI LT+N ++++ Sbjct: 113 NGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQA 172 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRED 170 LGKH IIC+ED++HEI+TVGPHFKEANNFLWPF KRNHYVEGGDAGNRE+ Sbjct: 173 LGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNREN 232 Query: 169 YINQLVRRMN 140 +IN+LVRRMN Sbjct: 233 FINELVRRMN 242
>RL71_ARATH (P60040) 60S ribosomal protein L7-1| Length = 242 Score = 306 bits (784), Expect = 4e-83 Identities = 145/190 (76%), Positives = 166/190 (87%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y ++KEL+ LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIF Sbjct: 53 KEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIF 112 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NGVFLKVNKAT+NMLRRVEPYV YG+PNLKSV+ELIYKRGYGKLN QRI LT+N ++E+ Sbjct: 113 NGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQA 172 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRED 170 LGKH IIC ED++HEILTVGPHFKEANNFLWPF KRNHYVEGGDAGNRE+ Sbjct: 173 LGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNREN 232 Query: 169 YINQLVRRMN 140 +IN+L+RRMN Sbjct: 233 FINELIRRMN 242
>RL7_HUMAN (P18124) 60S ribosomal protein L7| Length = 248 Score = 249 bits (636), Expect = 6e-66 Identities = 121/190 (63%), Positives = 145/190 (76%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y + +++ R AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIF Sbjct: 59 KEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIF 118 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I Sbjct: 119 NGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARS 178 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRED 170 LGK+ IIC+ED++HEI TVG FKEANNFLWPF K H+VEGGDAGNRED Sbjct: 179 LGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNRED 238 Query: 169 YINQLVRRMN 140 IN+L+RRMN Sbjct: 239 QINRLIRRMN 248
>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7| Length = 248 Score = 249 bits (636), Expect = 6e-66 Identities = 121/190 (63%), Positives = 145/190 (76%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y + +++ R AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIF Sbjct: 59 KEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIF 118 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I Sbjct: 119 NGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARS 178 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRED 170 LGK+ IIC+ED++HEI TVG FKEANNFLWPF K H+VEGGDAGNRED Sbjct: 179 LGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNRED 238 Query: 169 YINQLVRRMN 140 IN+L+RRMN Sbjct: 239 QINRLIRRMN 248
>RL7_MOUSE (P14148) 60S ribosomal protein L7| Length = 270 Score = 248 bits (634), Expect = 1e-65 Identities = 121/190 (63%), Positives = 144/190 (75%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y + +++ R AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIF Sbjct: 81 KEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIF 140 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I Sbjct: 141 NGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARS 200 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRED 170 LGK IIC+ED++HEI TVG FKEANNFLWPF K H+VEGGDAGNRED Sbjct: 201 LGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNRED 260 Query: 169 YINQLVRRMN 140 IN+L+RRMN Sbjct: 261 QINRLIRRMN 270
>RL7_RAT (P05426) 60S ribosomal protein L7| Length = 260 Score = 248 bits (632), Expect = 2e-65 Identities = 119/190 (62%), Positives = 144/190 (75%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y + +++ R AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIF Sbjct: 71 KEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIF 130 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NG F+K+NKA++NMLR VEPY+A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N ++ Sbjct: 131 NGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLVARS 190 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRED 170 LGK IIC+ED++HEI TVG FKEANNFLWPF K H+VEGGDAGNRED Sbjct: 191 LGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNRED 250 Query: 169 YINQLVRRMN 140 IN+L+RRMN Sbjct: 251 QINRLIRRMN 260
>RL7_CAEEL (O01802) 60S ribosomal protein L7| Length = 244 Score = 241 bits (615), Expect = 2e-63 Identities = 114/187 (60%), Positives = 143/187 (76%) Frame = -1 Query: 703 YDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNG 524 Y KE ++LKREA KG FYV E K+ FVVRIRGIN +HPK +K LQ+LRLRQI NG Sbjct: 57 YRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNG 116 Query: 523 VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLG 344 VF+K+NKAT+ +LR +EPYVA+GYPN K++ +L+YKRGY K++ R+P+T+N ++E+ LG Sbjct: 117 VFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLG 176 Query: 343 KHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYI 164 K NIIC+ED+ HEI TVGPHFKEA NFLWPF K NH+VEGGD GNRED I Sbjct: 177 KFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQI 236 Query: 163 NQLVRRM 143 N L+R+M Sbjct: 237 NNLLRKM 243
>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7| Length = 248 Score = 239 bits (611), Expect = 5e-63 Identities = 112/191 (58%), Positives = 151/191 (79%), Gaps = 1/191 (0%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y ++E ++L+R A+ G F++ EAKL+F++RI+GIN + PK +KILQLLRL QI Sbjct: 58 KEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQIN 117 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NGVF++V KAT M++ VEP+VAYGYPNLKSV+ELIYKRGYGK+NKQR+ LT+N +IEE Sbjct: 118 NGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEEN 177 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNRE 173 LGK+ IIC+ED++HEI TVGP+FK+A+NFLWPF ++ H++EGGD GNRE Sbjct: 178 LGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNRE 237 Query: 172 DYINQLVRRMN 140 ++IN L+R+MN Sbjct: 238 EHINALIRQMN 248
>RL7_YARLI (Q6C603) 60S ribosomal protein L7| Length = 250 Score = 237 bits (604), Expect = 3e-62 Identities = 111/192 (57%), Positives = 147/192 (76%), Gaps = 2/192 (1%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y ++E ++L+REA++ G FYV E KL+FV+RI+GI+ M PK +K+LQLLRL QI Sbjct: 59 KEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQIN 118 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 NGVF+++ KAT +LR VEPY+A+GYPNL SVR+L+YKRGYGK+NKQRIPL++N +IEE Sbjct: 119 NGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEA 178 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNR 176 LGK+ IIC+ED++HEI TVGP FK+A+NFLWPF +R HY+EGG GNR Sbjct: 179 LGKYGIICMEDLIHEIYTVGPAFKQASNFLWPFKLSNPSGGWGVRRKFKHYIEGGSTGNR 238 Query: 175 EDYINQLVRRMN 140 E+ IN L++ N Sbjct: 239 EENINALIKAQN 250
>RL7_ASHGO (Q755A7) 60S ribosomal protein L7| Length = 243 Score = 231 bits (589), Expect = 2e-60 Identities = 105/192 (54%), Positives = 145/192 (75%), Gaps = 2/192 (1%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y+ ++ ++Q KREA+ G +YV + KL+FV+RI+GIN + PK +K+LQLLRL QI Sbjct: 52 KEYETAERAVIQAKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPRKVLQLLRLNQIN 111 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 +GVF+KV KAT +LR VEPYVAYGYP+ ++R+L+YKRGYGK+NKQRI L+ N ++E Sbjct: 112 SGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQLVYKRGYGKINKQRIALSENSIVEAN 171 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNR 176 LGK+ II ++D++HEI+TVGPHFK+ANNFLWPF R H+++GG GNR Sbjct: 172 LGKYGIISVDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNR 231 Query: 175 EDYINQLVRRMN 140 E++IN+LV+ MN Sbjct: 232 EEFINKLVKSMN 243
>RL7_DROME (P32100) 60S ribosomal protein L7| Length = 252 Score = 229 bits (584), Expect = 7e-60 Identities = 115/188 (61%), Positives = 142/188 (75%), Gaps = 1/188 (0%) Frame = -1 Query: 703 YDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNG 524 Y ++ ++L+R A+ + FYV EAKL FVVRIRGIN + PK +K+LQL RLRQI NG Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123 Query: 523 VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLG 344 VF+K+NKATINMLR EPY+ +GYPNLKSVRELIYKRG+ K N+QR+P+T+N VIE L Sbjct: 124 VFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLR 183 Query: 343 K-HNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDY 167 + H I C+ED+VHEI TVGP+FK A+NFLWPF K NHYV GGD GNRED Sbjct: 184 QAHQIQCVEDLVHEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQ 243 Query: 166 INQLVRRM 143 IN+L+R+M Sbjct: 244 INRLLRKM 251
>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)| Length = 243 Score = 228 bits (582), Expect = 1e-59 Identities = 101/192 (52%), Positives = 147/192 (76%), Gaps = 2/192 (1%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y+ ++ ++Q KR+A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL +I Sbjct: 52 KEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRIN 111 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 +G F+KV KAT+ +L+ +EPYVAYGYP+ ++R+L+YKRG+GK+NKQR+PL++N +IE Sbjct: 112 SGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEAN 171 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNR 176 LGK+ I+ I+D++HEI+TVGPHFK+ANNFLWPF R H+++GG GNR Sbjct: 172 LGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNR 231 Query: 175 EDYINQLVRRMN 140 E++IN+LV+ MN Sbjct: 232 EEFINKLVKAMN 243
>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)| Length = 243 Score = 228 bits (582), Expect = 1e-59 Identities = 101/192 (52%), Positives = 147/192 (76%), Gaps = 2/192 (1%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y+ ++ ++Q KR+A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL +I Sbjct: 52 KEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRIN 111 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 +G F+KV KAT+ +L+ +EPYVAYGYP+ ++R+L+YKRG+GK+NKQR+PL++N +IE Sbjct: 112 SGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEAN 171 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNR 176 LGK+ I+ I+D++HEI+TVGPHFK+ANNFLWPF R H+++GG GNR Sbjct: 172 LGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNR 231 Query: 175 EDYINQLVRRMN 140 E++IN+LV+ MN Sbjct: 232 EEFINKLVKSMN 243
>RL7_DICDI (P11874) 60S ribosomal protein L7| Length = 245 Score = 226 bits (577), Expect = 4e-59 Identities = 107/188 (56%), Positives = 142/188 (75%) Frame = -1 Query: 703 YDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNG 524 Y ++E ++L R A+ G FYV P AK+ FV+RIRGIN + PK +K+L+LLRL Q+ NG Sbjct: 58 YHKTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNG 117 Query: 523 VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLG 344 VF+K+NKA+INML+ VEPYVAYG+PNLKS++ELIYKRG+ K++ QRIPLT+N ++E+ LG Sbjct: 118 VFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLG 177 Query: 343 KHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYI 164 K IIC+ED++HEI T G HFK+ NN LWPF K+ +++GGDAGNRE I Sbjct: 178 KFGIICVEDIIHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLI 237 Query: 163 NQLVRRMN 140 N L+ RMN Sbjct: 238 NNLIHRMN 245
>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C| Length = 251 Score = 225 bits (574), Expect = 1e-58 Identities = 110/194 (56%), Positives = 149/194 (76%), Gaps = 5/194 (2%) Frame = -1 Query: 709 KXYDAQ----DKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRL 542 + YDA+ ++E ++L R+AR +G +YV E KL+FV+RIRGIN + PK +KI+QLLRL Sbjct: 57 ESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRL 116 Query: 541 RQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKV 362 QI NGVF+K NKAT ML+ VEPYV YG PNLK+VREL+YKRG+GK+NKQRI L++N + Sbjct: 117 IQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAI 176 Query: 361 IEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDA 185 IE LGK++I+ IED++HEI TVGP+FK+A NF+WPF ++ H++EGGDA Sbjct: 177 IEAALGKYSILSIEDLIHEIYTVGPNFKQAANFIWPFQLSSPLGGWRDRKFKHFIEGGDA 236 Query: 184 GNREDYINQLVRRM 143 G R+++IN LVR+M Sbjct: 237 GKRDEHINSLVRKM 250
>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7| Length = 244 Score = 223 bits (568), Expect = 5e-58 Identities = 103/192 (53%), Positives = 143/192 (74%), Gaps = 2/192 (1%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y+A ++ ++ KREA+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL QI Sbjct: 53 KEYEAAERAVIDAKREAKASGSYYVEAQPKLVFVVRIKGINKIPPKPRKVLQLLRLTQIN 112 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 +G F+KV KAT +L+ +EPYVAYGYP+ +VR+L+YKRG+GK+NKQRI L++N ++E Sbjct: 113 SGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYKRGHGKINKQRIALSDNAIVEAN 172 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNR 176 LGK I+ I+D++HEI+TVGPHFK+ANNFLWPF R H+++GG GNR Sbjct: 173 LGKFGILSIDDLIHEIVTVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNR 232 Query: 175 EDYINQLVRRMN 140 E +IN+LV+ MN Sbjct: 233 EQFINKLVKAMN 244
>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B| Length = 250 Score = 222 bits (566), Expect = 8e-58 Identities = 107/188 (56%), Positives = 145/188 (77%), Gaps = 1/188 (0%) Frame = -1 Query: 703 YDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNG 524 Y A ++E ++L R+AR +G ++V E KL+FVVRIRGIN + PK +KI+QLLRL QI NG Sbjct: 62 YRAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNG 121 Query: 523 VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLG 344 +F+K NKA ML+ VEPYV YG PN K+VRELIYKRG+GK+NKQRIPL++N +IE LG Sbjct: 122 IFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALG 181 Query: 343 KHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDY 167 K++I+ +ED++HEI TVGP+FK+A NFLWPF ++ H++EGGDAG R+++ Sbjct: 182 KYSILSVEDLIHEIYTVGPNFKQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEH 241 Query: 166 INQLVRRM 143 IN LV++M Sbjct: 242 INGLVQKM 249
>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7| Length = 241 Score = 220 bits (561), Expect = 3e-57 Identities = 101/191 (52%), Positives = 144/191 (75%), Gaps = 1/191 (0%) Frame = -1 Query: 709 KXYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIF 530 K Y ++ +++ KR+A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL QI Sbjct: 51 KEYTDAERAVIKAKRDAKAAGSYYVDAQPKLVFVVRIKGINKIAPKPRKVLQLLRLTQIN 110 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEG 350 GVF+++ KAT +L+ EPY+AYGYPNL ++R L+YKRG+GK+NKQRI L++N +IE Sbjct: 111 AGVFVRLTKATSELLKLAEPYIAYGYPNLSTIRHLVYKRGHGKINKQRIALSDNAIIEAN 170 Query: 349 LGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNRE 173 LGK+ I+ IED++HEI TVGP+FK+ANNFLWPF ++ H+++GGD GNRE Sbjct: 171 LGKYGILSIEDLIHEIYTVGPNFKQANNFLWPFKLSNPNGGFRTRKFFHFIQGGDTGNRE 230 Query: 172 DYINQLVRRMN 140 ++IN LV++MN Sbjct: 231 EFINALVKQMN 241
>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A| Length = 249 Score = 193 bits (490), Expect = 5e-49 Identities = 97/187 (51%), Positives = 129/187 (68%), Gaps = 1/187 (0%) Frame = -1 Query: 703 YDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNG 524 Y +++E ++L R A+ KG +V E KLLFV+RI G+ M PK +K+L+LLRL +I N Sbjct: 61 YRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNA 120 Query: 523 VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLG 344 VF++ NKA MLR VEPYV YG PNL SVRELIYKRG+GK+N QRI L++N +IEE LG Sbjct: 121 VFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEALG 180 Query: 343 KHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDY 167 K+++I IED++HEI VG HFKE FLWPF K+ H+ EG AG + Sbjct: 181 KYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEE 240 Query: 166 INQLVRR 146 IN+L+++ Sbjct: 241 INELIKK 247
>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1| Length = 246 Score = 152 bits (384), Expect = 1e-36 Identities = 81/185 (43%), Positives = 114/185 (61%) Frame = -1 Query: 694 QDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFL 515 Q +++V+L+R + + L FVVRI I+ + ++ + LRL++IF+GVF+ Sbjct: 62 QKRDMVRLRRLEMKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFV 121 Query: 514 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHN 335 KV + MLR VEPYV +G+PNLKSVRELI KRG K+ + IPLT+N VIEE LGK Sbjct: 122 KVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFG 181 Query: 334 IICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQL 155 +IC+ED++HEI G HF+E + FL PF + E G G R + INQL Sbjct: 182 VICLEDLIHEIAFPGKHFQEISWFLRPFHLSVARHATKNRVGFLKEMGTPGYRGERINQL 241 Query: 154 VRRMN 140 +R++N Sbjct: 242 IRQLN 246
>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1| Length = 246 Score = 150 bits (379), Expect = 4e-36 Identities = 81/185 (43%), Positives = 113/185 (61%) Frame = -1 Query: 694 QDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFL 515 Q ++ V+L+R + + L FVVRI I+ + ++ + LRL++IF+GVF+ Sbjct: 62 QKRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFV 121 Query: 514 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHN 335 KV + MLR VEPYV +G+PNLKSVRELI KRG K+ + IPLT+N VIEE LGK Sbjct: 122 KVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFG 181 Query: 334 IICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQL 155 +IC+ED++HEI G HF+E + FL PF + E G G R + INQL Sbjct: 182 VICLEDLIHEIAFPGKHFQEISWFLCPFHLSVARHATKNRVGFLKEMGTPGYRGERINQL 241 Query: 154 VRRMN 140 +R++N Sbjct: 242 IRQLN 246
>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7| Length = 239 Score = 112 bits (280), Expect = 1e-24 Identities = 65/188 (34%), Positives = 111/188 (59%), Gaps = 1/188 (0%) Frame = -1 Query: 703 YDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNG 524 Y Q++E+ L++++ MK GFYV EA+ V+ IR PK +K+L+L RL++I Sbjct: 55 YYEQEREI--LEKKSSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTC 112 Query: 523 VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLG 344 V ++ NK+T ML+ ++ +VA+G ++ +R+L+Y +G G+ R+ LTN + + G Sbjct: 113 VLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDG 172 Query: 343 KHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN-HYVEGGDAGNREDY 167 K I CIE++VH I FK+ N+FL+PF +++ + +GG GN +D Sbjct: 173 K--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDL 230 Query: 166 INQLVRRM 143 ++ L+ RM Sbjct: 231 LSNLLERM 238
>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein| L7-like) Length = 322 Score = 107 bits (266), Expect = 5e-23 Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 8/131 (6%) Frame = -1 Query: 619 LLFVVRIRGINAMHPKTK--KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPN 446 LLF+VR+RG A++ K KIL LLRL + GVF+K+ K +L+ + PYV G P+ Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPS 200 Query: 445 LKSVRELIYKRGY------GKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPH 284 L S+R LI KRG + I L +N ++EE LG H IIC+ED++HEI T+G Sbjct: 201 LSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGES 260 Query: 283 FKEANNFLWPF 251 F N FL PF Sbjct: 261 FSVCNFFLQPF 271
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7| Length = 318 Score = 104 bits (259), Expect = 3e-22 Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 8/158 (5%) Frame = -1 Query: 700 DAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMH--PKTKKILQLLRLRQIFN 527 D +D+E L RE + G E LLFV+R++G A+ K K+L LLRL ++ Sbjct: 115 DEEDEEDDGLIREKIVYDG-----EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNT 169 Query: 526 GVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNK------QRIPLTNNK 365 GVF+K+ K +L+ V PY+ G P+L S+R LI KR + + I L +N Sbjct: 170 GVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNN 229 Query: 364 VIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 251 ++EE LG +ICIED++HEI T+G +F + FL PF Sbjct: 230 IVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267
>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7| Length = 317 Score = 102 bits (253), Expect = 2e-21 Identities = 56/134 (41%), Positives = 87/134 (64%), Gaps = 8/134 (5%) Frame = -1 Query: 628 EAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 455 E +LLFV+R++G + A P K +IL LRL ++ VF+K+ + T ++L+ + PYV G Sbjct: 133 EEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVG 192 Query: 454 YPNLKSVRELIYKRG---YGKLNKQR---IPLTNNKVIEEGLGKHNIICIEDVVHEILTV 293 P+LKS+R LI KR Y + +++ I L +N ++EE LG +ICI+D++HEI T+ Sbjct: 193 KPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATL 252 Query: 292 GPHFKEANNFLWPF 251 G +F + N FL PF Sbjct: 253 GENFTKCNFFLQPF 266
>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7| Length = 293 Score = 98.6 bits (244), Expect = 2e-20 Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 8/133 (6%) Frame = -1 Query: 625 AKLLFVVRIRGINA--MHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGY 452 A LLFVVR+RG A + K ++L LLRL ++ GVF+++ +L+ V PYV G Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGR 169 Query: 451 PNLKSVRELIYKRGY------GKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVG 290 P+L S+R L+ KR G+ + L +N V+EE LG +IC+ED++HEI T+G Sbjct: 170 PSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMG 229 Query: 289 PHFKEANNFLWPF 251 F + N FL PF Sbjct: 230 EAFAKCNFFLLPF 242
>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7| Length = 275 Score = 95.5 bits (236), Expect = 1e-19 Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 11/136 (8%) Frame = -1 Query: 625 AKLLFVVRI----RGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAY 458 AKLLF++RI +G+ + K +K+L LLRL + GVF+K+ AT+ +L+ + PY+ Sbjct: 92 AKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVA 150 Query: 457 GYPNLKSVRELIYKRGY-----GKLNKQRI-PLTNNKVIEEGLGKH-NIICIEDVVHEIL 299 G P+L S+R+L KR + + RI L NN V+E+ G ICIED++HE+ Sbjct: 151 GKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELA 210 Query: 298 TVGPHFKEANNFLWPF 251 T+G HFK +N++ PF Sbjct: 211 TLGEHFKTVSNWILPF 226
>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)| Length = 212 Score = 87.4 bits (215), Expect = 4e-17 Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 8/136 (5%) Frame = -1 Query: 634 SPEAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 461 S + L +VR G + A P K +K+LQLLRL +I +GVF+K+ + +L+ + PY Sbjct: 27 SGKPTLYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTV 86 Query: 460 YGYPNLKSVRELIYKRGYGKL------NKQRIPLTNNKVIEEGLGKHNIICIEDVVHEIL 299 P+L++VR+L+ KR + +++ L +N ++EE LG IICIED++HE Sbjct: 87 IXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETS 146 Query: 298 TVGPHFKEANNFLWPF 251 + FK +FL PF Sbjct: 147 HLATTFKTVTHFLDPF 162
>RL30_PYRHO (O59440) 50S ribosomal protein L30P| Length = 155 Score = 52.8 bits (125), Expect = 1e-06 Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 2/160 (1%) Frame = -1 Query: 616 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 440 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 439 SVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFL 260 ++ +LI KRG NK P+T ++ ++E LG + IE+ +++ K+ N Sbjct: 63 TLAKLIRKRGKLIGNK---PVT-DEYVKEKLG----MTIEEFAQKVINGEMSLKDLPNLK 114 Query: 259 WPFXXX-XXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 F K+ + EGG G R + IN+L+ RM Sbjct: 115 PVFRLHPPRGGFKGSKKRSFQEGGALGYRGEKINELIERM 154
>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)| Length = 155 Score = 52.4 bits (124), Expect = 1e-06 Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 2/160 (1%) Frame = -1 Query: 616 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 440 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 439 SVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFL 260 ++ +LI KRG NK P+T ++ ++E LG + IE+ +++ K+ N Sbjct: 63 TLAKLIRKRGRLIGNK---PVT-DEYVKEKLG----MTIEEFAQKVVNGEMSLKDLPNLK 114 Query: 259 WPFXXX-XXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 F K+ + EGG G R + IN+L+ RM Sbjct: 115 PVFRLHPPRGGFRGSKKRSFKEGGALGYRGEKINELIERM 154
>RL30_PYRAB (Q9V1V6) 50S ribosomal protein L30P| Length = 155 Score = 52.0 bits (123), Expect = 2e-06 Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 2/160 (1%) Frame = -1 Query: 616 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 440 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 439 SVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFL 260 ++ +LI KRG NK P+T ++ ++E LG + IE+ +++ K+ N Sbjct: 63 TLAKLIRKRGRLIGNK---PVT-DEYVKEKLG----MTIEEFAQKVINGEMSLKDLPNLK 114 Query: 259 WPFXXX-XXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 F K+ + EGG G R + IN L+ RM Sbjct: 115 PVFRLHPPRGGFRGSKKRSFKEGGALGYRGEKINDLIERM 154
>RL30_AERPE (Q9YF96) 50S ribosomal protein L30P| Length = 162 Score = 46.2 bits (108), Expect = 1e-04 Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 4/163 (2%) Frame = -1 Query: 619 LLFVVRIRGINAMHPKTKKILQLLRLRQIFNG-VFLKVNKATINMLRRVEPYVAYGYPNL 443 L V+RIRG + P K L LLRLR+ + ++ +MLR VE + YG Sbjct: 6 LYAVIRIRGTVDVPPDIDKTLYLLRLRRRYTASIYHDSLPGLRDMLRTVEAWTTYGEIEE 65 Query: 442 KSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHF-KEANN 266 + + EL+ KRG +K PLT +K +EE LG + + ++ ++++ H+ + Sbjct: 66 RVLEELLRKRGRIVGDK---PLT-DKWVEENLG---LSGLGELAEKLVSGELHYHRLEEK 118 Query: 265 FLWPFXXXX--XXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 + PF + + +GG+ G R IN+L+ +M Sbjct: 119 GVKPFFRLHPPRGGFKKSIKRMFRDGGELGYRGSAINELILKM 161
>RL30_ARCFU (O28375) 50S ribosomal protein L30P| Length = 152 Score = 44.3 bits (103), Expect = 4e-04 Identities = 43/156 (27%), Positives = 73/156 (46%) Frame = -1 Query: 610 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 431 VVR+RG +H K K+ L++LRL + ++ V + + ML+ V+ YVAYG N +++ Sbjct: 4 VVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLA 63 Query: 430 ELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 251 L+ RG N++ LT+ V E K IE+ ++ K+ + F Sbjct: 64 LLLRLRGRLTGNRK---LTDEYVKE----KTGYETIEEFAKAVVEGKASLKDLPDLKPVF 116 Query: 250 XXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 + HY G+ G + IN+L+ +M Sbjct: 117 RLHPPRKGIKNIKWHYPR-GNLGYHGEEINRLLYKM 151
>RL30_SULSO (Q9UX86) 50S ribosomal protein L30P| Length = 158 Score = 43.9 bits (102), Expect = 5e-04 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 4/164 (2%) Frame = -1 Query: 622 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 443 +LL ++RIRG + L +LRLR FN + + ML +V PY+ +G + Sbjct: 3 ELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDP 62 Query: 442 KSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHE----ILTVGPHFKE 275 +++ LI R L + ++ ++E L NI + ++E + + +FK Sbjct: 63 DTLKLLIINR----LETVKGDKVSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKL 118 Query: 274 ANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 P + Y G+ G R D IN+L+RRM Sbjct: 119 PIRLHPP-----RGGFKGSVKRPYKNKGEFGYRGDKINELMRRM 157
>RL30_SULAC (O05642) 50S ribosomal protein L30P| Length = 156 Score = 42.7 bits (99), Expect = 0.001 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 1/161 (0%) Frame = -1 Query: 622 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 443 +L+ V+RIRG A + L +LRL+ FN + + + ML V YV +G N Sbjct: 3 ELIGVIRIRGWAATPWYIQDTLSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELND 62 Query: 442 KSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNF 263 + +R L+ KL R N + +++ L +E + L + K F Sbjct: 63 EGLRLLV-----SKLEISRGKKVNEEYVKDKLNVDFQSFVESIKDGKLRLN---KLDEIF 114 Query: 262 LWPFXXX-XXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 P + GG+ G R D IN+L+RRM Sbjct: 115 SLPIRLHPPKGGFKGKVSRPFRAGGEFGYRGDKINELIRRM 155
>RL30_METJA (P54046) 50S ribosomal protein L30P| Length = 154 Score = 42.4 bits (98), Expect = 0.001 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 1/157 (0%) Frame = -1 Query: 610 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 431 V+RIRG + L++LRL ++ + V + + ML++V+ YV +G + ++ Sbjct: 5 VIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLV 64 Query: 430 ELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEAN-NFLWP 254 +LI KRG NK+ N ++I+E G + +E++ +I+ KE ++ Sbjct: 65 KLILKRGRLPGNKK----VNPEIIKELTG----MDVEELAEKIINGEIKLKETPLKPVFR 116 Query: 253 FXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 + + GG G R + IN+L+ +M Sbjct: 117 LHPPRKGFERGGIKKPFSVGGALGYRGEKINELLEKM 153
>RL30_METTH (O26132) 50S ribosomal protein L30P| Length = 152 Score = 41.6 bits (96), Expect = 0.003 Identities = 34/156 (21%), Positives = 69/156 (44%) Frame = -1 Query: 610 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 431 VVR+RG + +++LRL +I + V ++ + + ML++ + Y+ +G + +++ Sbjct: 4 VVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLT 63 Query: 430 ELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 251 +I KRG R+ + +++ +E + + D + G E F Sbjct: 64 AMIRKRG-------RL-IGGDRITDEYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVF 115 Query: 250 XXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 143 + + EGG G R + IN L++RM Sbjct: 116 RLHPPRKGYEGIKKAFNEGGSLGYRGEKINDLLKRM 151
>RL30_METVA (P14035) 50S ribosomal protein L30P| Length = 154 Score = 41.2 bits (95), Expect = 0.003 Identities = 30/107 (28%), Positives = 51/107 (47%) Frame = -1 Query: 610 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 431 VVR+RG + +++LRL ++ + V + N M+++V+ YV YG + +++ Sbjct: 5 VVRVRGSVGVRGDIADTMKMLRLHRVNHCVVIPENDHYTGMIKKVKDYVTYGEIDKETLV 64 Query: 430 ELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVG 290 LI KRG L NK + E L K + D + E + G Sbjct: 65 SLILKRG---------RLAGNKRLSEELLKELVELPVDALAEKVLAG 102
>HCP_SALTY (Q8ZQE8) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 30.4 bits (67), Expect(2) = 0.038 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -1 Query: 544 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 380 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 379 ----LTNNKVIEEGLGKHN 335 +T+N +I+ +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGSYD 327 Score = 26.2 bits (56), Expect(2) = 0.038 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%) Frame = -3 Query: 308 RDLDGWPS---LQGGQQLPVAIQAQGAAGRPQEE 216 R + GWP L+G PV QAQ AG P E Sbjct: 333 RSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSE 366
>HCP_SALTI (Q8Z829) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 30.4 bits (67), Expect(2) = 0.038 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -1 Query: 544 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 380 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 379 ----LTNNKVIEEGLGKHN 335 +T+N +I+ +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGSYD 327 Score = 26.2 bits (56), Expect(2) = 0.038 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%) Frame = -3 Query: 308 RDLDGWPS---LQGGQQLPVAIQAQGAAGRPQEE 216 R + GWP L+G PV QAQ AG P E Sbjct: 333 RSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSE 366
>MUKF_PASMU (Q9CN38) Chromosome partition protein mukF| Length = 441 Score = 32.3 bits (72), Expect = 1.5 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = +2 Query: 281 EVRANRQDLVDNVFNADDVVLSKTL-LDDLVVGQRNPLLVELSITSLVDQLPHTLQVRVP 457 E N ++L D + A D + ++ L + D V+GQ N VE IT L +L + Sbjct: 210 ETSGNLRELQDTLNAAGDKLQAQLLRIQDCVIGQENLAFVEQLITDLQAKLDRIISWGQQ 269 Query: 458 ICNIWLDPAEHV 493 ++W+ HV Sbjct: 270 AIDLWIGYDRHV 281
>DPOL_NPVLD (P30318) DNA polymerase (EC 2.7.7.7)| Length = 1014 Score = 31.6 bits (70), Expect = 2.6 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%) Frame = -1 Query: 598 RGINAMHPKTKKILQLLRLRQ-------IFNGVFLKVNKATINMLRRVEPYVAYGYPNL- 443 + +NA++PK K L +R+R +N + K+ N L+R+ + YGY + Sbjct: 579 KNVNAVNPKLLKTLSEMRVRYKGLRDQCEYNSFYYKLYDKIQNALKRIANSI-YGYYGIF 637 Query: 442 -KSVRELIYKRGYGKLNK 392 K + I K G GKL + Sbjct: 638 FKPLANYITKMGRGKLKE 655
>MUTH_YERPE (Q8ZHU5) DNA mismatch repair protein mutH (Methyl-directed mismatch| repair protein) Length = 228 Score = 31.2 bits (69), Expect = 3.5 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = -3 Query: 365 GHRGGSWKAQHHLH*RRCPRDLDGWPSLQGGQQLPVAIQAQGAA---GRPQEEEEPLRRG 195 G+ G +W++ H H + R L W ++G + +P+A + GA EEEE LRR Sbjct: 102 GNSGVTWESSHVRH--KLARVL--WVPVEGERHIPLAERRVGAPLLWSPNVEEEELLRRD 157 Query: 194 W 192 W Sbjct: 158 W 158
>RL30_HALMA (P14121) 50S ribosomal protein L30P (Hmal30) (Hl20) (Hl16)| Length = 154 Score = 31.2 bits (69), Expect = 3.5 Identities = 15/66 (22%), Positives = 35/66 (53%) Frame = -1 Query: 610 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 431 +V++RG MH + L++L + + + + A M+ +V +VA+G P+ +++ Sbjct: 4 LVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLE 63 Query: 430 ELIYKR 413 ++ R Sbjct: 64 TVLATR 69
>AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic acid-induced| protein ARG4) Length = 196 Score = 30.8 bits (68), Expect = 4.5 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -1 Query: 529 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 389 +G+F+KV+ LR+V+ V GYP L E ++K G+ +++ Sbjct: 98 DGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIGEYSER 144
>HCP_ECOLI (P75825) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 30.0 bits (66), Expect = 7.7 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -1 Query: 544 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 380 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 379 ----LTNNKVIEEGLGKHN 335 +T+N +I+ +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327
>HCP_ECOL6 (Q8FJE0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 30.0 bits (66), Expect = 7.7 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -1 Query: 544 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 380 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 379 ----LTNNKVIEEGLGKHN 335 +T+N +I+ +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327
>HCP_ECO57 (Q8X6L0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 550 Score = 30.0 bits (66), Expect = 7.7 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -1 Query: 544 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 380 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308 Query: 379 ----LTNNKVIEEGLGKHN 335 +T+N +I+ +G ++ Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327
>END3_SYNY3 (P73715) Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or| apyrimidinic site) lyase) Length = 219 Score = 30.0 bits (66), Expect = 7.7 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = -1 Query: 514 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHN 335 +VNK T + +R A Y + + + ELI+ G+ + + I K++EE G+ Sbjct: 55 RVNKVTPALFQRYPDANALAYGDRQEIEELIHSTGFFRNKAKNIQGACRKIVEEFDGE-- 112 Query: 334 IICIEDVVHEILTV-GPHFKEAN 269 + + E+LT+ G K AN Sbjct: 113 ---VPQRMEELLTLPGVARKTAN 132
>HCP_SHIFL (Q83S05) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster| protein) (HCP) Length = 552 Score = 30.0 bits (66), Expect = 7.7 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -1 Query: 544 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 380 L+ ++N L+ + T +N+ E A+GYP L+ + L+ G G N+Q R P Sbjct: 253 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 310 Query: 379 ----LTNNKVIEEGLGKHN 335 +T+N +I+ +G ++ Sbjct: 311 GPIVMTSNCIIDPTVGAYD 329 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,141,293 Number of Sequences: 219361 Number of extensions: 2118660 Number of successful extensions: 5496 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 5293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5468 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7592921998 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
