| Clone Name | rbags33n15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming... | 108 | 2e-23 | 2 | UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-formi... | 105 | 2e-22 | 3 | UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-form... | 97 | 3e-20 | 4 | UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-form... | 95 | 2e-19 | 5 | CBP2_WHEAT (P08819) Serine carboxypeptidase 2 (EC 3.4.16.6) (Ser... | 30 | 8.3 |
|---|
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 108 bits (269), Expect = 2e-23 Identities = 48/65 (73%), Positives = 58/65 (89%) Frame = -1 Query: 660 EDIIPFFQAAKLTKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLNS 481 E+IIPFFQAA L+K+C +VQKCYI LS+QVKEKLG IDPYF+KLADAMVTW+EAWD +N+ Sbjct: 287 EEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEINN 346 Query: 480 KDSKE 466 S+E Sbjct: 347 NKSEE 351
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 105 bits (261), Expect = 2e-22 Identities = 53/70 (75%), Positives = 55/70 (78%) Frame = -1 Query: 660 EDIIPFFQAAKLTKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLNS 481 EDIIPFFQ + K+CDTVQKCYI LS QVKEKLG IDPYFVKL DAMVTWIEAWD LN Sbjct: 294 EDIIPFFQNVTIPKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELN- 352 Query: 480 KDSKEADANG 451 S A ANG Sbjct: 353 -PSTPAAANG 361
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 97.4 bits (241), Expect = 3e-20 Identities = 44/59 (74%), Positives = 50/59 (84%) Frame = -1 Query: 660 EDIIPFFQAAKLTKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLN 484 E+IIPFFQAA L KEC TVQ+CY+ LS+QVK+KL IDPYF KL +AMVTWIEAWD LN Sbjct: 284 EEIIPFFQAATLPKECTTVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELN 342
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 94.7 bits (234), Expect = 2e-19 Identities = 43/59 (72%), Positives = 50/59 (84%) Frame = -1 Query: 660 EDIIPFFQAAKLTKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLN 484 E+IIPF Q+A L K+C +VQ+CY+ LS+QVKEKL IDPYF KLADAMVTWIEAWD LN Sbjct: 288 EEIIPFSQSATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELN 346
>CBP2_WHEAT (P08819) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine| carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine Length = 423 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = +1 Query: 58 RSTVLLYTRTVAMFIQQPFILTFQCTQDYTETLAATSITVGVLNLDKTTS---WFDNNEI 228 RS + +Y +A ++ I F D L AT ++G L L TTS W+D+ E+ Sbjct: 316 RSMLPIYRELIAAGLR---IWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEV 372 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,313,301 Number of Sequences: 219361 Number of extensions: 1094812 Number of successful extensions: 2935 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2881 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2935 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)