ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33n15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming... 108 2e-23
2UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-formi... 105 2e-22
3UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-form... 97 3e-20
4UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-form... 95 2e-19
5CBP2_WHEAT (P08819) Serine carboxypeptidase 2 (EC 3.4.16.6) (Ser... 30 8.3

>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Reversibly glycosylated polypeptide)
          Length = 364

 Score =  108 bits (269), Expect = 2e-23
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = -1

Query: 660 EDIIPFFQAAKLTKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLNS 481
           E+IIPFFQAA L+K+C +VQKCYI LS+QVKEKLG IDPYF+KLADAMVTW+EAWD +N+
Sbjct: 287 EEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEINN 346

Query: 480 KDSKE 466
             S+E
Sbjct: 347 NKSEE 351



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>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Amylogenin) (Golgi-associated protein se-wap41)
          Length = 364

 Score =  105 bits (261), Expect = 2e-22
 Identities = 53/70 (75%), Positives = 55/70 (78%)
 Frame = -1

Query: 660 EDIIPFFQAAKLTKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLNS 481
           EDIIPFFQ   + K+CDTVQKCYI LS QVKEKLG IDPYFVKL DAMVTWIEAWD LN 
Sbjct: 294 EDIIPFFQNVTIPKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELN- 352

Query: 480 KDSKEADANG 451
             S  A ANG
Sbjct: 353 -PSTPAAANG 361



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>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 1)
           (UPTG 1)
          Length = 365

 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = -1

Query: 660 EDIIPFFQAAKLTKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLN 484
           E+IIPFFQAA L KEC TVQ+CY+ LS+QVK+KL  IDPYF KL +AMVTWIEAWD LN
Sbjct: 284 EEIIPFFQAATLPKECTTVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELN 342



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>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 2)
           (UPTG 2)
          Length = 366

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 43/59 (72%), Positives = 50/59 (84%)
 Frame = -1

Query: 660 EDIIPFFQAAKLTKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLN 484
           E+IIPF Q+A L K+C +VQ+CY+ LS+QVKEKL  IDPYF KLADAMVTWIEAWD LN
Sbjct: 288 EEIIPFSQSATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELN 346



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>CBP2_WHEAT (P08819) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine|
           carboxypeptidase II) (Carboxypeptidase D) (CPDW-II)
           (CP-WII) [Contains: Serine carboxypeptidase 2 chain A
           (Serine carboxypeptidase II chain A); Serine
           carboxypeptidase 2 chain B (Serine
          Length = 423

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 58  RSTVLLYTRTVAMFIQQPFILTFQCTQDYTETLAATSITVGVLNLDKTTS---WFDNNEI 228
           RS + +Y   +A  ++   I  F    D    L AT  ++G L L  TTS   W+D+ E+
Sbjct: 316 RSMLPIYRELIAAGLR---IWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEV 372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,313,301
Number of Sequences: 219361
Number of extensions: 1094812
Number of successful extensions: 2935
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2935
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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