ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33n12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482519.1| Oryza sativa (japonica cultivar-group), mRNA 412 e-112
2ref|XM_507237.1| PREDICTED Oryza sativa (japonica cultivar-group... 412 e-112
3dbj|AK101681.1| Oryza sativa (japonica cultivar-group) cDNA clon... 412 e-112
4dbj|AK102785.1| Oryza sativa (japonica cultivar-group) cDNA clon... 404 e-109
5gb|AY109250.1| Zea mays PCO087848 mRNA sequence 212 1e-51
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 147 6e-32
7dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic D... 147 6e-32
8ref|NM_121609.2| Arabidopsis thaliana Ran GTPase binding / chrom... 82 3e-12
9emb|BX830402.1|CNS0A1C5 Arabidopsis thaliana Full-length cDNA Co... 82 3e-12
10gb|AY085145.1| Arabidopsis thaliana clone 13316 mRNA, complete s... 82 3e-12
11ref|NM_111118.3| Arabidopsis thaliana Ran GTPase binding / chrom... 66 2e-07
12ref|NM_001035546.1| Arabidopsis thaliana Ran GTPase binding / ch... 62 3e-06
13emb|BX823346.1|CNS0A6KE Arabidopsis thaliana Full-length cDNA Co... 62 3e-06
14emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BA... 60 1e-05
15emb|BX824696.1|CNS0A6SX Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
16gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 58 4e-05
17emb|BX822851.1|CNS0A7AJ Arabidopsis thaliana Full-length cDNA Co... 52 0.003
18gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC... 48 0.042
19ref|XM_948911.1| Theileria annulata strain Ankara hypothetical p... 42 2.6
20emb|AL161723.12| Human DNA sequence from clone RP13-172P13 on ch... 42 2.6
21emb|AL663045.7| Mouse DNA sequence from clone RP23-219K7 on chro... 42 2.6
22gb|AC105918.5| Homo sapiens BAC clone RP11-395M19 from 4, comple... 42 2.6
23emb|BX569800.8| Zebrafish DNA sequence from clone DKEY-106C24 in... 42 2.6
24dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 42 2.6
25gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-43... 42 2.6
26gb|AC009479.4|AC009479 Homo sapiens BAC clone RP11-278L6 from Y,... 42 2.6
27emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C ... 42 2.6
28emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 42 2.6
29emb|BX294167.5| Zebrafish DNA sequence from clone CH211-244O18 i... 42 2.6
30emb|AL953866.5| Zebrafish DNA sequence from clone DKEY-60I9 in l... 42 2.6
31emb|AL603864.8| Mouse DNA sequence from clone RP23-478N15 on chr... 42 2.6
32emb|AL844531.6| Mouse DNA sequence from clone RP23-211J18 on chr... 42 2.6 
>ref|XM_482519.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1454

 Score =  412 bits (208), Expect = e-112
 Identities = 388/448 (86%)
 Strand = Plus / Minus

                                                                        
Query: 275  atgggcacttccattgggtgacccgtagtcaccttcctaccgtcgcctagacggccatga 334
            ||||| |||||||| ||||| ||||| || |||||||| |||| ||| ||||||||||| 
Sbjct: 1192 atggggacttccatcgggtggcccgtcgtgaccttcctgccgtagcccagacggccatgg 1133

                                                                        
Query: 335  tcgcccctcccgtaagagaatatccggccgtcactggttagcacaactgaatgggtccct 394
            || || || |||||||| || || || || ||||  |||||| ||||||||||||| |||
Sbjct: 1132 tcacctctaccgtaagaaaacattcgtccatcacgagttagcgcaactgaatgggttcct 1073

                                                                        
Query: 395  ccacatgatacctgaacaatatcctctccagctagaagctgaacctgtagtggcaccatg 454
            |||||||||||||||| ||||||||||||||| ||||||| ||||| | | || ||||||
Sbjct: 1072 ccacatgatacctgaataatatcctctccagcaagaagctcaaccttttggggaaccatg 1013

                                                                        
Query: 455  tggctgctcttatcatccccaaagccgagcctcccatgttctcctcttccccaagcatat 514
            || || || |||||||| ||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 1012 tgactacttttatcatctccaaatccaagcctcccatgctctcctctcccccaagcatac 953

                                                                        
Query: 515  acctctccttctttagttaatgcggctgaatgccaacctccagcagcaatgtcaaccaat 574
            |||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 952  acctctccctctttagttaatgcagttgaatgccaacctccagcagcaatgtcaaccaat 893

                                                                        
Query: 575  gaaaggttagatagcccttcaacacggattggttgtgatctcggttgggtatctccaatc 634
            ||||||| |||||  |||||||||||||||||||| ||||| ||||| ||||||||| | 
Sbjct: 892  gaaaggtcagataatccttcaacacggattggttgcgatcttggttgagtatctccagtg 833

                                                                        
Query: 635  cccagctggccatattcattattaccccatgcccacaagattctgtctactgacagtgcc 694
            ||||| || ||||| ||||| ||||||||||||||||| ||||  ||| |||  || |||
Sbjct: 832  cccagttgaccatactcattgttaccccatgcccacaaaattccatcttctgttagagcc 773

                                        
Query: 695  aaattatggaatgcccctacagcaatca 722
            |||||||||||||| |||||||||||||
Sbjct: 772  aaattatggaatgcacctacagcaatca 745
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>ref|XM_507237.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_B05.9 mRNA
          Length = 1643

 Score =  412 bits (208), Expect = e-112
 Identities = 388/448 (86%)
 Strand = Plus / Minus

                                                                        
Query: 275  atgggcacttccattgggtgacccgtagtcaccttcctaccgtcgcctagacggccatga 334
            ||||| |||||||| ||||| ||||| || |||||||| |||| ||| ||||||||||| 
Sbjct: 1145 atggggacttccatcgggtggcccgtcgtgaccttcctgccgtagcccagacggccatgg 1086

                                                                        
Query: 335  tcgcccctcccgtaagagaatatccggccgtcactggttagcacaactgaatgggtccct 394
            || || || |||||||| || || || || ||||  |||||| ||||||||||||| |||
Sbjct: 1085 tcacctctaccgtaagaaaacattcgtccatcacgagttagcgcaactgaatgggttcct 1026

                                                                        
Query: 395  ccacatgatacctgaacaatatcctctccagctagaagctgaacctgtagtggcaccatg 454
            |||||||||||||||| ||||||||||||||| ||||||| ||||| | | || ||||||
Sbjct: 1025 ccacatgatacctgaataatatcctctccagcaagaagctcaaccttttggggaaccatg 966

                                                                        
Query: 455  tggctgctcttatcatccccaaagccgagcctcccatgttctcctcttccccaagcatat 514
            || || || |||||||| ||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 965  tgactacttttatcatctccaaatccaagcctcccatgctctcctctcccccaagcatac 906

                                                                        
Query: 515  acctctccttctttagttaatgcggctgaatgccaacctccagcagcaatgtcaaccaat 574
            |||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 905  acctctccctctttagttaatgcagttgaatgccaacctccagcagcaatgtcaaccaat 846

                                                                        
Query: 575  gaaaggttagatagcccttcaacacggattggttgtgatctcggttgggtatctccaatc 634
            ||||||| |||||  |||||||||||||||||||| ||||| ||||| ||||||||| | 
Sbjct: 845  gaaaggtcagataatccttcaacacggattggttgcgatcttggttgagtatctccagtg 786

                                                                        
Query: 635  cccagctggccatattcattattaccccatgcccacaagattctgtctactgacagtgcc 694
            ||||| || ||||| ||||| ||||||||||||||||| ||||  ||| |||  || |||
Sbjct: 785  cccagttgaccatactcattgttaccccatgcccacaaaattccatcttctgttagagcc 726

                                        
Query: 695  aaattatggaatgcccctacagcaatca 722
            |||||||||||||| |||||||||||||
Sbjct: 725  aaattatggaatgcacctacagcaatca 698
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>dbj|AK101681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058K22, full
            insert sequence
          Length = 1643

 Score =  412 bits (208), Expect = e-112
 Identities = 388/448 (86%)
 Strand = Plus / Minus

                                                                        
Query: 275  atgggcacttccattgggtgacccgtagtcaccttcctaccgtcgcctagacggccatga 334
            ||||| |||||||| ||||| ||||| || |||||||| |||| ||| ||||||||||| 
Sbjct: 1145 atggggacttccatcgggtggcccgtcgtgaccttcctgccgtagcccagacggccatgg 1086

                                                                        
Query: 335  tcgcccctcccgtaagagaatatccggccgtcactggttagcacaactgaatgggtccct 394
            || || || |||||||| || || || || ||||  |||||| ||||||||||||| |||
Sbjct: 1085 tcacctctaccgtaagaaaacattcgtccatcacgagttagcgcaactgaatgggttcct 1026

                                                                        
Query: 395  ccacatgatacctgaacaatatcctctccagctagaagctgaacctgtagtggcaccatg 454
            |||||||||||||||| ||||||||||||||| ||||||| ||||| | | || ||||||
Sbjct: 1025 ccacatgatacctgaataatatcctctccagcaagaagctcaaccttttggggaaccatg 966

                                                                        
Query: 455  tggctgctcttatcatccccaaagccgagcctcccatgttctcctcttccccaagcatat 514
            || || || |||||||| ||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 965  tgactacttttatcatctccaaatccaagcctcccatgctctcctctcccccaagcatac 906

                                                                        
Query: 515  acctctccttctttagttaatgcggctgaatgccaacctccagcagcaatgtcaaccaat 574
            |||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 905  acctctccctctttagttaatgcagttgaatgccaacctccagcagcaatgtcaaccaat 846

                                                                        
Query: 575  gaaaggttagatagcccttcaacacggattggttgtgatctcggttgggtatctccaatc 634
            ||||||| |||||  |||||||||||||||||||| ||||| ||||| ||||||||| | 
Sbjct: 845  gaaaggtcagataatccttcaacacggattggttgcgatcttggttgagtatctccagtg 786

                                                                        
Query: 635  cccagctggccatattcattattaccccatgcccacaagattctgtctactgacagtgcc 694
            ||||| || ||||| ||||| ||||||||||||||||| ||||  ||| |||  || |||
Sbjct: 785  cccagttgaccatactcattgttaccccatgcccacaaaattccatcttctgttagagcc 726

                                        
Query: 695  aaattatggaatgcccctacagcaatca 722
            |||||||||||||| |||||||||||||
Sbjct: 725  aaattatggaatgcacctacagcaatca 698
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>dbj|AK102785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107K23, full
            insert sequence
          Length = 1454

 Score =  404 bits (204), Expect = e-109
 Identities = 387/448 (86%)
 Strand = Plus / Minus

                                                                        
Query: 275  atgggcacttccattgggtgacccgtagtcaccttcctaccgtcgcctagacggccatga 334
            ||||| |||||||| ||||| ||||| || |||||||| |||| ||| ||||||||||| 
Sbjct: 1192 atggggacttccatcgggtggcccgtcgtgaccttcctgccgtagcccagacggccatgg 1133

                                                                        
Query: 335  tcgcccctcccgtaagagaatatccggccgtcactggttagcacaactgaatgggtccct 394
            || || || |||||||| || || || || ||||  |||||| ||||||||||||| |||
Sbjct: 1132 tcacctctaccgtaagaaaacattcgtccatcacgagttagcgcaactgaatgggttcct 1073

                                                                        
Query: 395  ccacatgatacctgaacaatatcctctccagctagaagctgaacctgtagtggcaccatg 454
            ||||| |||||||||| ||||||||||||||| ||||||| ||||| | | || ||||||
Sbjct: 1072 ccacacgatacctgaataatatcctctccagcaagaagctcaaccttttggggaaccatg 1013

                                                                        
Query: 455  tggctgctcttatcatccccaaagccgagcctcccatgttctcctcttccccaagcatat 514
            || || || |||||||| ||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 1012 tgactacttttatcatctccaaatccaagcctcccatgctctcctctcccccaagcatac 953

                                                                        
Query: 515  acctctccttctttagttaatgcggctgaatgccaacctccagcagcaatgtcaaccaat 574
            |||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 952  acctctccctctttagttaatgcagttgaatgccaacctccagcagcaatgtcaaccaat 893

                                                                        
Query: 575  gaaaggttagatagcccttcaacacggattggttgtgatctcggttgggtatctccaatc 634
            ||||||| |||||  |||||||||||||||||||| ||||| ||||| ||||||||| | 
Sbjct: 892  gaaaggtcagataatccttcaacacggattggttgcgatcttggttgagtatctccagtg 833

                                                                        
Query: 635  cccagctggccatattcattattaccccatgcccacaagattctgtctactgacagtgcc 694
            ||||| || ||||| ||||| ||||||||||||||||| ||||  ||| |||  || |||
Sbjct: 832  cccagttgaccatactcattgttaccccatgcccacaaaattccatcttctgttagagcc 773

                                        
Query: 695  aaattatggaatgcccctacagcaatca 722
            |||||||||||||| |||||||||||||
Sbjct: 772  aaattatggaatgcacctacagcaatca 745
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>gb|AY109250.1| Zea mays PCO087848 mRNA sequence
          Length = 677

 Score =  212 bits (107), Expect = 1e-51
 Identities = 182/207 (87%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcggcaagtttatgggcacttccattgggtgacccgtagtcaccttcctaccgtcgcct 322
           ||||||| ||| ||||||| |||||| ||||| ||||| ||||||||||| |||| ||||
Sbjct: 218 ggcggcaggttgatgggcaattccatggggtggcccgtcgtcaccttcctgccgtagcct 159

                                                                       
Query: 323 agacggccatgatcgcccctcccgtaagagaatatccggccgtcactggttagcacaact 382
           ||||||||||| ||||||||||||||||| || || ||||| || |  | |||| |||||
Sbjct: 158 agacggccatggtcgcccctcccgtaagaaaacattcggccatctcgagctagcgcaact 99

                                                                       
Query: 383 gaatgggtccctccacatgatacctgaacaatatcctctccagctagaagctgaacctgt 442
           ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 98  gaatgtgttcctccacatgatacctgaacaatatcctctccagctagaagctcaaccttt 39

                                      
Query: 443 agtggcaccatgtggctgctcttatca 469
           || ||||||||||| || |||||||||
Sbjct: 38  aggggcaccatgtgactactcttatca 12
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  147 bits (74), Expect = 6e-32
 Identities = 134/154 (87%)
 Strand = Plus / Plus

                                                                            
Query: 569      accaatgaaaggttagatagcccttcaacacggattggttgtgatctcggttgggtatct 628
                ||||||||||||| |||||  |||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 20815729 accaatgaaaggtcagataatccttcaacacggattggttgcgatcttggttgagtatct 20815788

                                                                            
Query: 629      ccaatccccagctggccatattcattattaccccatgcccacaagattctgtctactgac 688
                ||| | ||||| || ||||| ||||| ||||||||||||||||| ||||  ||| |||  
Sbjct: 20815789 ccagtgcccagttgaccatactcattgttaccccatgcccacaaaattccatcttctgtt 20815848

                                                  
Query: 689      agtgccaaattatggaatgcccctacagcaatca 722
                || ||||||||||||||||| |||||||||||||
Sbjct: 20815849 agagccaaattatggaatgcacctacagcaatca 20815882



 Score =  103 bits (52), Expect = 8e-19
 Identities = 100/116 (86%)
 Strand = Plus / Plus

                                                                            
Query: 403      tacctgaacaatatcctctccagctagaagctgaacctgtagtggcaccatgtggctgct 462
                |||||||| ||||||||||||||| ||||||| ||||| | | || |||||||| || ||
Sbjct: 20815044 tacctgaataatatcctctccagcaagaagctcaaccttttggggaaccatgtgactact 20815103

                                                                        
Query: 463      cttatcatccccaaagccgagcctcccatgttctcctcttccccaagcatatacct 518
                 |||||||| ||||| || ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 20815104 tttatcatctccaaatccaagcctcccatgctctcctctcccccaagcatacacct 20815159



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                           
Query: 513      atacctctccttctttagttaatgcggctgaatgccaacctccagcagcaatgtcaacc 571
                |||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 20815287 atacctctccctctttagttaatgcagttgaatgccaacctccagcagcaatgtcaacc 20815345



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 371      gttagcacaactgaatgggtccctccacatgatacctg 408
                |||||| ||||||||||||| |||||||||||||||||
Sbjct: 20814931 gttagcgcaactgaatgggttcctccacatgatacctg 20814968



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                           
Query: 275      atgggcacttccattgggtgacccgtagtcaccttcctaccgtcgcctagacggccatg 333
                ||||| |||||||| ||||| ||||| || |||||||| |||| ||| |||||||||||
Sbjct: 20814195 atggggacttccatcgggtggcccgtcgtgaccttcctgccgtagcccagacggccatg 20814253
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>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1124_B05
          Length = 109917

 Score =  147 bits (74), Expect = 6e-32
 Identities = 134/154 (87%)
 Strand = Plus / Plus

                                                                         
Query: 569   accaatgaaaggttagatagcccttcaacacggattggttgtgatctcggttgggtatct 628
             ||||||||||||| |||||  |||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 46862 accaatgaaaggtcagataatccttcaacacggattggttgcgatcttggttgagtatct 46921

                                                                         
Query: 629   ccaatccccagctggccatattcattattaccccatgcccacaagattctgtctactgac 688
             ||| | ||||| || ||||| ||||| ||||||||||||||||| ||||  ||| |||  
Sbjct: 46922 ccagtgcccagttgaccatactcattgttaccccatgcccacaaaattccatcttctgtt 46981

                                               
Query: 689   agtgccaaattatggaatgcccctacagcaatca 722
             || ||||||||||||||||| |||||||||||||
Sbjct: 46982 agagccaaattatggaatgcacctacagcaatca 47015



 Score =  103 bits (52), Expect = 8e-19
 Identities = 100/116 (86%)
 Strand = Plus / Plus

                                                                         
Query: 403   tacctgaacaatatcctctccagctagaagctgaacctgtagtggcaccatgtggctgct 462
             |||||||| ||||||||||||||| ||||||| ||||| | | || |||||||| || ||
Sbjct: 46177 tacctgaataatatcctctccagcaagaagctcaaccttttggggaaccatgtgactact 46236

                                                                     
Query: 463   cttatcatccccaaagccgagcctcccatgttctcctcttccccaagcatatacct 518
              |||||||| ||||| || ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 46237 tttatcatctccaaatccaagcctcccatgctctcctctcccccaagcatacacct 46292



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 513   atacctctccttctttagttaatgcggctgaatgccaacctccagcagcaatgtcaacc 571
             |||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 46420 atacctctccctctttagttaatgcagttgaatgccaacctccagcagcaatgtcaacc 46478



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 371   gttagcacaactgaatgggtccctccacatgatacctg 408
             |||||| ||||||||||||| |||||||||||||||||
Sbjct: 46064 gttagcgcaactgaatgggttcctccacatgatacctg 46101



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 275   atgggcacttccattgggtgacccgtagtcaccttcctaccgtcgcctagacggccatg 333
             ||||| |||||||| ||||| ||||| || |||||||| |||| ||| |||||||||||
Sbjct: 45328 atggggacttccatcgggtggcccgtcgtgaccttcctgccgtagcccagacggccatg 45386
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>ref|NM_121609.2| Arabidopsis thaliana Ran GTPase binding / chromatin binding
           AT5G16040 mRNA, complete cds
          Length = 1745

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 473 ccaaagccgagcctcccatgttctcctcttccccaagcatatacctctccttctttagtt 532
           ||||| |||||||| ||||| ||||||||||||||| |||| ||||||||||| || |||
Sbjct: 867 ccaaacccgagccttccatgctctcctcttccccaaccataaacctctccttcattggtt 808

                                                    
Query: 533 aatgcggctgaatgccaacctccagcagcaatgtcaaccaa 573
           || || | ||||||||| || || ||||| || ||||||||
Sbjct: 807 aaagctgttgaatgccatccacccgcagcgatatcaaccaa 767



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 611 gatctcggttgggtatctccaatccccagctggccatattcattattaccccatgcccac 670
           ||||||||||| || |||||| | || || || |||||||||||||||||||| ||||||
Sbjct: 729 gatctcggttgtgtgtctccagttccaagttgtccatattcattattaccccaagcccac 670

             
Query: 671 aa 672
           ||
Sbjct: 669 aa 668
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>emb|BX830402.1|CNS0A1C5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB78ZE02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1348

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 473 ccaaagccgagcctcccatgttctcctcttccccaagcatatacctctccttctttagtt 532
           ||||| |||||||| ||||| ||||||||||||||| |||| ||||||||||| || |||
Sbjct: 849 ccaaacccgagccttccatgctctcctcttccccaaccataaacctctccttcattggtt 790

                                                    
Query: 533 aatgcggctgaatgccaacctccagcagcaatgtcaaccaa 573
           || || | ||||||||| || || ||||| || ||||||||
Sbjct: 789 aaagctgttgaatgccatccacccgcagcgatatcaaccaa 749



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 644 ccatattcattattaccccatgcccacaa 672
           |||||||||||| ||||||| ||||||||
Sbjct: 676 ccatattcattactaccccaagcccacaa 648
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>gb|AY085145.1| Arabidopsis thaliana clone 13316 mRNA, complete sequence
          Length = 1389

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 473 ccaaagccgagcctcccatgttctcctcttccccaagcatatacctctccttctttagtt 532
           ||||| |||||||| ||||| ||||||||||||||| |||| ||||||||||| || |||
Sbjct: 867 ccaaacccgagccttccatgctctcctcttccccaaccatacacctctccttcattggtt 808

                                                    
Query: 533 aatgcggctgaatgccaacctccagcagcaatgtcaaccaa 573
           || || | ||||||||| || || ||||| || ||||||||
Sbjct: 807 aaagctgttgaatgccatccacccgcagcgatatcaaccaa 767



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 611 gatctcggttgggtatctccaatccccagctggccatattcattattaccccatgcccac 670
           ||||||||||| || |||||| | || || || |||||||||||||||||||| ||||||
Sbjct: 729 gatctcggttgtgtgtctccagttccaagttgtccatattcattattaccccaagcccac 670

             
Query: 671 aa 672
           ||
Sbjct: 669 aa 668
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>ref|NM_111118.3| Arabidopsis thaliana Ran GTPase binding / chromatin binding AT3G02510
            transcript variant AT3G02510.1 mRNA, complete cds
          Length = 1554

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 158/199 (79%), Gaps = 3/199 (1%)
 Strand = Plus / Minus

                                                                        
Query: 378  caactgaatgggtccctccacatgatacctgaacaatatcctctccagctagaagctgaa 437
            |||||||||| || || ||||| || |||||||  ||||| ||| |||||||||| | ||
Sbjct: 1026 caactgaatgtgttccgccacaagaaacctgaattatatcttcttcagctagaagattaa 967

                                                                        
Query: 438  cctgtagtggcaccatgtggctgctcttatcat---ccccaaagccgagcctcccatgtt 494
            | |   |||| ||||| | ||||||||| ||||   | ||||  ||||| || |||||||
Sbjct: 966  ctttctgtggaaccattttgctgctcttgtcattgtcaccaagcccgagtcttccatgtt 907

                                                                        
Query: 495  ctcctcttccccaagcatatacctctccttctttagttaatgcggctgaatgccaacctc 554
            |||||||||||||| |||| ||||||||||  | |||||  || | ||||||||| || |
Sbjct: 906  ctcctcttccccaaccatacacctctcctttatcagttagagccgttgaatgccatccac 847

                               
Query: 555  cagcagcaatgtcaaccaa 573
            | |||||||| || |||||
Sbjct: 846  ccgcagcaatatcgaccaa 828
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>ref|NM_001035546.1| Arabidopsis thaliana Ran GTPase binding / chromatin binding
           AT3G02510 transcript variant AT3G02510.2 mRNA, complete
           cds
          Length = 1727

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 479 ccgagcctcccatgttctcctcttccccaagcatatacctctccttctttagttaatgcg 538
           ||||| || ||||||||||||||||||||| |||| ||||||||||  | |||||  || 
Sbjct: 937 ccgagtcttccatgttctcctcttccccaaccatacacctctcctttatcagttagagcc 878

                                              
Query: 539 gctgaatgccaacctccagcagcaatgtcaaccaa 573
           | ||||||||| || || |||||||| || |||||
Sbjct: 877 gttgaatgccatccacccgcagcaatatcgaccaa 843
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>emb|BX823346.1|CNS0A6KE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS25ZD09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1445

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 479 ccgagcctcccatgttctcctcttccccaagcatatacctctccttctttagttaatgcg 538
           ||||| || ||||||||||||||||||||| |||| ||||||||||  | |||||  || 
Sbjct: 843 ccgagtcttccatgttctcctcttccccaaccatacacctctcctttatcagttagagcc 784

                                              
Query: 539 gctgaatgccaacctccagcagcaatgtcaaccaa 573
           | ||||||||| || || |||||||| || |||||
Sbjct: 783 gttgaatgccatccacccgcagcaatatcgaccaa 749
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>emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BAC clone F1N13 (ESSA project)
          Length = 74687

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                         
Query: 611   gatctcggttgggtatctccaatccccagctggccatattcattattaccccatgcccac 670
             ||||||||||| || |||||| | || || || |||||||||||||||||||| ||||||
Sbjct: 60476 gatctcggttgtgtgtctccagttccaagttgtccatattcattattaccccaagcccac 60535

               
Query: 671   aa 672
             ||
Sbjct: 60536 aa 60537



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 473   ccaaagccgagcctcccatgttctcctcttccccaagcatatacct 518
             ||||| |||||||| ||||| ||||||||||||||| |||| ||||
Sbjct: 60077 ccaaacccgagccttccatgctctcctcttccccaaccataaacct 60122
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>emb|BX824696.1|CNS0A6SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH65ZB02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1457

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 488 ccatgttctcctcttccccaagcatatacctctccttctttagttaatgcggctgaatgc 547
           ||||||||||||||||||||| |||| ||||||||||  | |||||  || | |||||||
Sbjct: 913 ccatgttctcctcttccccaaccatacacctctcctttatcagttagagccgttgaatgc 854

                                     
Query: 548 caacctccagcagcaatgtcaaccaa 573
           || || || |||||||| || |||||
Sbjct: 853 catccacccgcagcaatatcgaccaa 828
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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                               
Query: 470    tccccaaagccgagcctcccatgttctcctcttccccaagcatatacct 518
              |||||||| ||||||||||||||||| ||||| |||||| |||| ||||
Sbjct: 125400 tccccaaacccgagcctcccatgttcccctctcccccaaccatacacct 125448



 Score = 46.1 bits (23), Expect = 0.17
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                          
Query: 602    attggttgtgatctcggttgggtatctccaatccccagctggccatattcattattaccc 661
              ||||| || ||||| |||||||| |||||  | || || || |||||||| ||||| |||
Sbjct: 126028 attggctgggatcttggttgggtgtctcccgttccaagttgtccatattcgttattgccc 126087

                         
Query: 662    catgcccacaa 672
              |||||||||||
Sbjct: 126088 catgcccacaa 126098



 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 545    tgccaacctccagcagcaatgtcaacc 571
              ||||| |||||||||||||||||||||
Sbjct: 125885 tgccatcctccagcagcaatgtcaacc 125911
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>emb|BX822851.1|CNS0A7AJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB69ZB10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1333

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 ccatgttctcctcttccccaagcatatacctctccttctttagttaatgcggctgaatgc 547
           ||||||||||||||||||||| |||| |||||| |||  | |||||  || | |||||||
Sbjct: 867 ccatgttctcctcttccccaaccatacacctcttctttatcagttagagccgttgaatgc 808

                                     
Query: 548 caacctccagcagcaatgtcaaccaa 573
           || || || |||||||| || |||||
Sbjct: 807 catccacccgcagcaatatcgaccaa 782
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>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence,
             complete sequence
          Length = 103904

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 479   ccgagcctcccatgttctcctcttccccaagcatatacct 518
             ||||| || ||||||||||||||||||||| |||| ||||
Sbjct: 38256 ccgagtcttccatgttctcctcttccccaaccatacacct 38295
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>ref|XM_948911.1| Theileria annulata strain Ankara hypothetical protein (TA06955)
           partial mRNA
          Length = 1653

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 246 tggtgctggtctttggtggcg 266
           |||||||||||||||||||||
Sbjct: 317 tggtgctggtctttggtggcg 297
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>emb|AL161723.12| Human DNA sequence from clone RP13-172P13 on chromosome X, complete
              sequence
          Length = 155725

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      tgtttttgaaattattttctt 23
              |||||||||||||||||||||
Sbjct: 132287 tgtttttgaaattattttctt 132307
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>emb|AL663045.7| Mouse DNA sequence from clone RP23-219K7 on chromosome 11 Contains the
             Elac2 gene for elaC homolog 2 (E. coli), a novel gene, a
             peroxiredoxin 6 (Prdx6) pseudogene, a novel gene
             (1700086D15Rik), a novel pseudogene, and two CpG islands,
             complete sequence
          Length = 196566

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   ggagctggtgctggtctttggtggc 265
             |||||||||||||||| ||||||||
Sbjct: 58151 ggagctggtgctggtcattggtggc 58175
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>gb|AC105918.5| Homo sapiens BAC clone RP11-395M19 from 4, complete sequence
          Length = 53838

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 432   gctgaacctgtagtggcacca 452
             |||||||||||||||||||||
Sbjct: 44111 gctgaacctgtagtggcacca 44131
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>emb|BX569800.8| Zebrafish DNA sequence from clone DKEY-106C24 in linkage group 21,
             complete sequence
          Length = 188915

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 126   cacaatttcatttcatacact 146
             |||||||||||||||||||||
Sbjct: 97255 cacaatttcatttcatacact 97235
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    actgttaccacaatttcattt 138
              |||||||||||||||||||||
Sbjct: 983135 actgttaccacaatttcattt 983155
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>gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-439M19, complete sequence
          Length = 165843

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 623   gtatctccaatccccagctgg 643
             |||||||||||||||||||||
Sbjct: 71611 gtatctccaatccccagctgg 71631
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>gb|AC009479.4|AC009479 Homo sapiens BAC clone RP11-278L6 from Y, complete sequence
          Length = 155299

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      tgtttttgaaattattttctt 23
              |||||||||||||||||||||
Sbjct: 138504 tgtttttgaaattattttctt 138524
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>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5)
          Length = 893329

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 641    tggccatattcattattaccccatgccca 669
              ||||||||||| ||||| |||||||||||
Sbjct: 714982 tggccatattcgttatttccccatgccca 714954
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 635    cccagctggccatattcattattaccccatgcccaca 671
              ||||| ||||||||| ||||||  |||||||||||||
Sbjct: 163946 cccagttggccatatccattatatccccatgcccaca 163910
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>emb|BX294167.5| Zebrafish DNA sequence from clone CH211-244O18 in linkage group 5,
             complete sequence
          Length = 191302

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 719   atcatgctcacttgctcaagc 739
             |||||||||||||||||||||
Sbjct: 74312 atcatgctcacttgctcaagc 74332
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>emb|AL953866.5| Zebrafish DNA sequence from clone DKEY-60I9 in linkage group 21,
             complete sequence
          Length = 198925

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 126   cacaatttcatttcatacact 146
             |||||||||||||||||||||
Sbjct: 87939 cacaatttcatttcatacact 87919
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>emb|AL603864.8| Mouse DNA sequence from clone RP23-478N15 on chromosome 15, complete
              sequence
          Length = 178412

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 498    ctcttccccaagcatatacct 518
              |||||||||||||||||||||
Sbjct: 157200 ctcttccccaagcatatacct 157220
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>emb|AL844531.6| Mouse DNA sequence from clone RP23-211J18 on chromosome 2, complete
              sequence
          Length = 181194

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 8      ttgaaattattttcttcgccttgac 32
              |||||||||||||||| ||||||||
Sbjct: 130458 ttgaaattattttcttggccttgac 130434


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,567,108
Number of Sequences: 3902068
Number of extensions: 6567108
Number of successful extensions: 124912
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124773
Number of HSP's gapped (non-prelim): 139
length of query: 752
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 729
effective length of database: 17,143,297,704
effective search space: 12497464026216
effective search space used: 12497464026216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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