ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33n09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473602.1| Oryza sativa (japonica cultivar-group), predic... 202 1e-48
2gb|AY105875.1| Zea mays PCO125270 mRNA sequence 200 4e-48
3dbj|AK073711.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 3e-46
4emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4,... 161 4e-36
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
6dbj|AK119957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 4e-36
7gb|DQ191648.1| Solanum tuberosum unknown mRNA 90 1e-14
8gb|BT012760.1| Lycopersicon esculentum clone 113704F, mRNA sequence 90 1e-14
9gb|DQ235202.1| Solanum tuberosum clone 171H05 ubiquitin fusion-d... 84 7e-13
10gb|AY535070.1| Beta vulgaris SNP marker MP0001 genomic sequence 78 4e-11
11ref|NM_201828.1| Arabidopsis thaliana unknown protein AT2G29070 ... 70 1e-08
12ref|NM_128464.2| Arabidopsis thaliana unknown protein AT2G29070 ... 70 1e-08
13gb|BT011682.1| Arabidopsis thaliana At2g29070 gene, complete cds 70 1e-08
14gb|BT012260.1| Arabidopsis thaliana At2g29070 gene, complete cds 70 1e-08
15gb|AC005315.3| Arabidopsis thaliana chromosome 2 clone T9I4 map ... 70 1e-08
16gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete se... 64 6e-07
17ref|XM_464339.1| Oryza sativa (japonica cultivar-group), mRNA 62 3e-06
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
19dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
20dbj|AK121784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-06
21gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 56 2e-04
22gb|BT016689.1| Zea mays clone Contig522 mRNA sequence 54 6e-04
23gb|AY112612.1| Zea mays CL14668_1 mRNA sequence 54 6e-04
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
25dbj|AK120576.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
26dbj|AK099770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
27emb|BX571771.5| Zebrafish DNA sequence from clone CH211-160F8 in... 46 0.15
28ref|XM_627931.1| Cryptosporidium parvum Iowa II DHHC family palm... 46 0.15
29ref|XM_660972.1| Cryptosporidium hominis TU502 binding protein (... 46 0.15
30emb|BX640583.7| Zebrafish DNA sequence from clone CH211-186C22 i... 46 0.15
31gb|DQ270212.1| Pristionchus pacificus EGL-17 (egl-17) mRNA, egl-... 44 0.59
32gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosom... 42 2.3
33gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, co... 42 2.3
34gb|AY190954.1| Drosophila virilis clone DVIF01_17_B21 (D1423) ge... 42 2.3
35gb|AC139512.20| Mus musculus chromosome 6, clone RP24-540G13, co... 42 2.3
36gb|U09989.1|ZMU09989 Zea mays D3L H(+)-transporting ATPase (Mha1... 42 2.3
37gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome... 42 2.3
38emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in... 42 2.3
39gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, com... 42 2.3
40emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 42 2.3
41gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, co... 42 2.3
42gb|AC153740.3| Colobus guereza clone CH272-157M1, complete sequence 40 9.3
43gb|AC158412.4| Cercopithecus aethiops clone CH252-436N4, complet... 40 9.3
44ref|NM_001036307.1| Arabidopsis thaliana unknown protein AT2G212... 40 9.3
45ref|NM_127699.2| Arabidopsis thaliana unknown protein AT2G21270 ... 40 9.3
46gb|AY587885.1| Triticum aestivum ubiquitin fusion degradation pr... 40 9.3
47gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 40 9.3
48gb|AC147187.2| Pan troglodytes clone CH251-116A11, complete sequ... 40 9.3
49gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.3
50emb|BX927362.10| Zebrafish DNA sequence from clone CH211-170N20 ... 40 9.3
51gb|AC146115.2| Pan troglodytes BAC clone RP43-38M17 from 7, comp... 40 9.3
52ref|XM_816528.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.3
53emb|AL954816.21| Zebrafish DNA sequence from clone DKEY-38P6 in ... 40 9.3
54gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, comple... 40 9.3
55gb|AC073130.3| Homo sapiens BAC clone RP11-667F14 from 7, comple... 40 9.3
56gb|AC006024.1| Homo sapiens PAC clone RP5-1166G19 from 7, comple... 40 9.3
57gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, com... 40 9.3
58gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.3
59emb|AL662882.13| Mouse DNA sequence from clone RP23-187N13 on ch... 40 9.3
60emb|BX324181.26| Zebrafish DNA sequence from clone CH211-203O8 i... 40 9.3
61emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 i... 40 9.3
62gb|AC171744.3| Nomascus leucogenys leucogenys clone CH271-119I21... 40 9.3
63gb|AC166002.3| Nomascus leucogenys leucogenys clone CH271-400K18... 40 9.3
64gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map... 40 9.3
65gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chrom... 40 9.3
66gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 40 9.3
67dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
68emb|BX819179.1|CNS0AA8E Arabidopsis thaliana Full-length cDNA Co... 40 9.3
69gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 9.3
70gb|AC098872.5| Homo sapiens BAC clone RP11-773P9 from 2, complet... 40 9.3
71gb|AC023827.7| Homo sapiens chromosome 16 clone RP11-42I10, comp... 40 9.3
72gb|AC007611.5|AC007611 Homo sapiens chromosome 16 clone RP11-452... 40 9.3
73gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, comple... 40 9.3
74gb|AF260225.1|AF260225 Homo sapiens TESTIN 2 and TESTIN 3 genes,... 40 9.3
75ref|XM_573634.1| PREDICTED: Rattus norvegicus Huntington disease... 40 9.3
76gb|AY087347.1| Arabidopsis thaliana clone 34470 mRNA, complete s... 40 9.3
77emb|BX004868.9| Zebrafish DNA sequence from clone DKEY-209F8, co... 40 9.3
78emb|BX004870.13| Zebrafish DNA sequence from clone CH211-168H9 i... 40 9.3
79dbj|AK108428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
80gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, co... 40 9.3
81gb|AC151364.3| Macaca mulatta clone CH250-142M15, complete sequence 40 9.3
82emb|CR385053.17| Zebrafish DNA sequence from clone DKEY-273G18 i... 40 9.3
83gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromoso... 40 9.3
84gb|U18650.1|RNU18650 Rattus norvegicus Huntington gene product m... 40 9.3
85emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chr... 40 9.3
86gb|AY067340.1| Schmidtea mediterranea clone H.40.10h unknown mRN... 40 9.3 
>ref|XM_473602.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 963

 Score =  202 bits (102), Expect = 1e-48
 Identities = 189/218 (86%)
 Strand = Plus / Minus

                                                                       
Query: 454 ttaccatccaaccgttttcctgaaccagtgaatggtttgaactttggttcatcttcaaca 513
           |||||||||| ||| ||||| |||||||| || || ||||| ||  ||||||||||||| 
Sbjct: 692 ttaccatccagccgctttccagaaccagtaaacggcttgaatttcagttcatcttcaact 633

                                                                       
Query: 514 ttagcctcttgatcttcagcaggtgccttgcctgcaggaactatgggacgctgtggtttt 573
           ||||| | || ||||||||||| |||||  | ||||||||||   ||  |||| || |||
Sbjct: 632 ttagcattttcatcttcagcagttgcctcacttgcaggaactgatggttgctgcggattt 573

                                                                       
Query: 574 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataatg 633
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 572 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtccgtctcaataata 513

                                                 
Query: 634 ctaactgcagaagcaggttttgcttcaacaatatcaat 671
           |||||||| ||||||||||||| ||||||||| |||||
Sbjct: 512 ctaactgcggaagcaggttttgtttcaacaatgtcaat 475



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 277 tctttcttgctgcttgcacttgaaccaaacacaagctttcctgttttctggcg 329
           ||||| ||| || ||||||||||||| || ||||||||||||| |||||||||
Sbjct: 866 tctttgttgttgtttgcacttgaaccgaaaacaagctttcctgatttctggcg 814



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 174 ctaacgcttcaaggagtagctcttcccagtgaacgcgttgaacttcggttcttccttctt 233
           |||||| ||||||||||||||||||||| | || || | |||||| || || ||||||||
Sbjct: 963 ctaacgtttcaaggagtagctcttcccactaaatgcttggaacttgggctcgtccttctt 904

                
Query: 234 cggag 238
            ||||
Sbjct: 903 tggag 899
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>gb|AY105875.1| Zea mays PCO125270 mRNA sequence
          Length = 1555

 Score =  200 bits (101), Expect = 4e-48
 Identities = 140/153 (91%)
 Strand = Plus / Minus

                                                                        
Query: 525  atcttcagcaggtgccttgcctgcaggaactatgggacgctgtggtttttcaggttcttt 584
            |||||||||||||||||||| |||||||||| | ||  |  ||||||| |||||||||||
Sbjct: 1016 atcttcagcaggtgccttgcttgcaggaactgttggttgtcgtggtttctcaggttcttt 957

                                                                        
Query: 585  gtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataatgctaactgcaga 644
             |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 956  ataatcaagaggaggcgcaaagtccacttcacagtctgtctcaataatgctaaccgcaga 897

                                             
Query: 645  agcaggttttgcttcaacaatatcaatataata 677
            |||||| |||| |||||||||||||||||||||
Sbjct: 896  agcaggctttgtttcaacaatatcaatataata 864



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 457  ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttcatc 506
            ||||||||||| |||||  ||||||| ||||||||||| |||||||||||
Sbjct: 1084 ccatccaaccgctttccaaaaccagtaaatggtttgaattttggttcatc 1035



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 169  agcagctaacgcttcaaggagtagctcttcccagtgaacgc 209
            ||||||||||| ||||| ||||||||||||||  |||||||
Sbjct: 1366 agcagctaacgtttcaatgagtagctcttcccgctgaacgc 1326



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 287  tgcttgcacttgaaccaaacacaagctttcctgttttctg 326
            ||||||||||||||||||| ||||| || || ||||||||
Sbjct: 1251 tgcttgcacttgaaccaaaaacaagtttcccagttttctg 1212



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 362  tttgctggtttgcccttttgtttgtgtctgaaggtgcaga 401
            ||||||| ||||| ||||||||||  ||||||||||||||
Sbjct: 1170 tttgctgatttgctcttttgtttgaatctgaaggtgcaga 1131
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>dbj|AK073711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061G23, full
           insert sequence
          Length = 1306

 Score =  194 bits (98), Expect = 3e-46
 Identities = 188/218 (86%)
 Strand = Plus / Minus

                                                                       
Query: 454 ttaccatccaaccgttttcctgaaccagtgaatggtttgaactttggttcatcttcaaca 513
           |||||||||| ||  ||||| |||||||| || || ||||| ||  ||||||||||||| 
Sbjct: 847 ttaccatccagccactttccagaaccagtaaacggcttgaatttcagttcatcttcaact 788

                                                                       
Query: 514 ttagcctcttgatcttcagcaggtgccttgcctgcaggaactatgggacgctgtggtttt 573
           ||||| | || ||||||||||| |||||  | ||||||||||   ||  |||| || |||
Sbjct: 787 ttagcattttcatcttcagcagttgcctcacttgcaggaactgatggttgctgcggattt 728

                                                                       
Query: 574 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataatg 633
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 727 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtccgtctcaataata 668

                                                 
Query: 634 ctaactgcagaagcaggttttgcttcaacaatatcaat 671
           |||||||| ||||||||||||| ||||||||| |||||
Sbjct: 667 ctaactgcggaagcaggttttgtttcaacaatgtcaat 630



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 277  tctttcttgctgcttgcacttgaaccaaacacaagctttcctgttttctggcg 329
            ||||| ||| || ||||||||||||| || ||||||||||||| |||||||||
Sbjct: 1021 tctttgttgttgtttgcacttgaaccgaaaacaagctttcctgatttctggcg 969



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 171  cagctaacgcttcaaggagtagctcttcccagtgaacgcgttgaacttcggttcttcctt 230
            ||||||||| ||||||||||||||||||||| | || || | |||||| || || |||||
Sbjct: 1121 cagctaacgtttcaaggagtagctcttcccactaaatgcttggaacttgggctcgtcctt 1062

                    
Query: 231  cttcggag 238
            ||| ||||
Sbjct: 1061 ctttggag 1054
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>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04,
              complete sequence
          Length = 164567

 Score =  161 bits (81), Expect = 4e-36
 Identities = 96/101 (95%)
 Strand = Plus / Minus

                                                                          
Query: 571    ttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaata 630
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131078 ttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtccgtctcaata 131019

                                                       
Query: 631    atgctaactgcagaagcaggttttgcttcaacaatatcaat 671
              || |||||||| ||||||||||||| ||||||||| |||||
Sbjct: 131018 atactaactgcggaagcaggttttgtttcaacaatgtcaat 130978



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 277    tctttcttgctgcttgcacttgaaccaaacacaagctttcctgttttctggcg 329
              ||||| ||| || ||||||||||||| || ||||||||||||| |||||||||
Sbjct: 132075 tctttgttgttgtttgcacttgaaccgaaaacaagctttcctgatttctggcg 132023



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                          
Query: 171    cagctaacgcttcaaggagtagctcttcccagtgaacgcgttgaacttcggttcttcctt 230
              ||||||||| ||||||||||||||||||||| | || || | |||||| || || |||||
Sbjct: 132602 cagctaacgtttcaaggagtagctcttcccactaaatgcttggaacttgggctcgtcctt 132543

                      
Query: 231    cttcggag 238
              ||| ||||
Sbjct: 132542 ctttggag 132535



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                          
Query: 454    ttaccatccaaccgttttcctgaaccagtgaatggtttgaactttggttcatcttcaaca 513
              |||||||||| ||| ||||| |||||||| || || ||||| ||  ||||||||||||| 
Sbjct: 131901 ttaccatccagccgctttccagaaccagtaaacggcttgaatttcagttcatcttcaact 131842

                   
Query: 514    ttagc 518
              |||||
Sbjct: 131841 ttagc 131837
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  161 bits (81), Expect = 4e-36
 Identities = 96/101 (95%)
 Strand = Plus / Minus

                                                                            
Query: 571      ttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaata 630
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 29064424 ttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtccgtctcaata 29064365

                                                         
Query: 631      atgctaactgcagaagcaggttttgcttcaacaatatcaat 671
                || |||||||| ||||||||||||| ||||||||| |||||
Sbjct: 29064364 atactaactgcggaagcaggttttgtttcaacaatgtcaat 29064324



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 277      tctttcttgctgcttgcacttgaaccaaacacaagctttcctgttttctggcg 329
                ||||| ||| || ||||||||||||| || ||||||||||||| |||||||||
Sbjct: 29065421 tctttgttgttgtttgcacttgaaccgaaaacaagctttcctgatttctggcg 29065369



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                            
Query: 171      cagctaacgcttcaaggagtagctcttcccagtgaacgcgttgaacttcggttcttcctt 230
                ||||||||| ||||||||||||||||||||| | || || | |||||| || || |||||
Sbjct: 29065948 cagctaacgtttcaaggagtagctcttcccactaaatgcttggaacttgggctcgtcctt 29065889

                        
Query: 231      cttcggag 238
                ||| ||||
Sbjct: 29065888 ctttggag 29065881



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 454      ttaccatccaaccgttttcctgaaccagtgaatggtttgaactttggttcatcttcaaca 513
                |||||||||| ||| ||||| |||||||| || || ||||| ||  ||||||||||||| 
Sbjct: 29065247 ttaccatccagccgctttccagaaccagtaaacggcttgaatttcagttcatcttcaact 29065188

                     
Query: 514      ttagc 518
                |||||
Sbjct: 29065187 ttagc 29065183
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>dbj|AK119957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C12, full
           insert sequence
          Length = 1108

 Score =  161 bits (81), Expect = 4e-36
 Identities = 96/101 (95%)
 Strand = Plus / Minus

                                                                       
Query: 571 ttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaata 630
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 704 ttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtccgtctcaata 645

                                                    
Query: 631 atgctaactgcagaagcaggttttgcttcaacaatatcaat 671
           || |||||||| ||||||||||||| ||||||||| |||||
Sbjct: 644 atactaactgcggaagcaggttttgtttcaacaatgtcaat 604
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>gb|DQ191648.1| Solanum tuberosum unknown mRNA
          Length = 1244

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 57/61 (93%)
 Strand = Plus / Minus

                                                                       
Query: 572 tttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataa 631
           |||||||||||||||||||||| || || |||||||| ||||||||||||||||||||||
Sbjct: 675 tttcaggttctttgtaatcaagtgggggagcaaagtctacttcacagtctgtctcaataa 616

            
Query: 632 t 632
           |
Sbjct: 615 t 615
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>gb|BT012760.1| Lycopersicon esculentum clone 113704F, mRNA sequence
          Length = 1128

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 57/61 (93%)
 Strand = Plus / Minus

                                                                       
Query: 572 tttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataa 631
           |||||||||||||||||||||| || || |||||||| ||||||||||||||||||||||
Sbjct: 645 tttcaggttctttgtaatcaagtgggggagcaaagtctacttcacagtctgtctcaataa 586

            
Query: 632 t 632
           |
Sbjct: 585 t 585
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>gb|DQ235202.1| Solanum tuberosum clone 171H05 ubiquitin fusion-degradation
           protein-like mRNA, complete cds
          Length = 1238

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                       
Query: 572 tttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataa 631
           |||||||||||||||||||||| ||||| |||||||| |||||||| || ||||||||||
Sbjct: 647 tttcaggttctttgtaatcaagtggaggagcaaagtctacttcacaatcggtctcaataa 588

                                                         
Query: 632 tgctaactgcagaagcaggttttgcttcaacaatatcaatataata 677
           | || | ||||  || |||||| | ||| ||||| || ||||||||
Sbjct: 587 tacttattgcattagaaggtttggtttccacaatgtctatataata 542
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>gb|AY535070.1| Beta vulgaris SNP marker MP0001 genomic sequence
          Length = 833

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                       
Query: 572 tttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataa 631
           ||||||||||||| |||||||||||||| ||||| || || ||||| |||||||||||||
Sbjct: 188 tttcaggttctttataatcaagaggaggggcaaaatcgacctcacaatctgtctcaataa 129

                      
Query: 632 tgctaactgca 642
           | |||| ||||
Sbjct: 128 tactaattgca 118
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>ref|NM_201828.1| Arabidopsis thaliana unknown protein AT2G29070 transcript variant
           AT2G29070.2 mRNA, complete cds
          Length = 1086

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 564 ctgtggtttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgt 623
           |||||| || |||||||||||||||||||||||||| ||||| || || ||||| || ||
Sbjct: 669 ctgtggcttctcaggttctttgtaatcaagaggaggagcaaaatcaacctcacaatccgt 610

                                                  
Query: 624 ctcaataatgctaactgcagaagcaggttttgcttcaac 662
            || ||||| || || || |||| ||||||||| |||||
Sbjct: 609 ttcgataatactcacagctgaagaaggttttgcctcaac 571
to top
>ref|NM_128464.2| Arabidopsis thaliana unknown protein AT2G29070 transcript variant
           AT2G29070.1 mRNA, complete cds
          Length = 1169

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 564 ctgtggtttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgt 623
           |||||| || |||||||||||||||||||||||||| ||||| || || ||||| || ||
Sbjct: 752 ctgtggcttctcaggttctttgtaatcaagaggaggagcaaaatcaacctcacaatccgt 693

                                                  
Query: 624 ctcaataatgctaactgcagaagcaggttttgcttcaac 662
            || ||||| || || || |||| ||||||||| |||||
Sbjct: 692 ttcgataatactcacagctgaagaaggttttgcctcaac 654
to top
>gb|BT011682.1| Arabidopsis thaliana At2g29070 gene, complete cds
          Length = 1145

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 564 ctgtggtttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgt 623
           |||||| || |||||||||||||||||||||||||| ||||| || || ||||| || ||
Sbjct: 649 ctgtggcttctcaggttctttgtaatcaagaggaggagcaaaatcaacctcacaatccgt 590

                                                  
Query: 624 ctcaataatgctaactgcagaagcaggttttgcttcaac 662
            || ||||| || || || |||| ||||||||| |||||
Sbjct: 589 ttcgataatactcacagctgaagaaggttttgcctcaac 551
to top
>gb|BT012260.1| Arabidopsis thaliana At2g29070 gene, complete cds
          Length = 939

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 564 ctgtggtttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgt 623
           |||||| || |||||||||||||||||||||||||| ||||| || || ||||| || ||
Sbjct: 567 ctgtggcttctcaggttctttgtaatcaagaggaggagcaaaatcaacctcacaatccgt 508

                                                  
Query: 624 ctcaataatgctaactgcagaagcaggttttgcttcaac 662
            || ||||| || || || |||| ||||||||| |||||
Sbjct: 507 ttcgataatactcacagctgaagaaggttttgcctcaac 469
to top
>gb|AC005315.3| Arabidopsis thaliana chromosome 2 clone T9I4 map mi54, complete
             sequence
          Length = 108393

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                         
Query: 564   ctgtggtttttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgt 623
             |||||| || |||||||||||||||||||||||||| ||||| || || ||||| || ||
Sbjct: 68499 ctgtggcttctcaggttctttgtaatcaagaggaggagcaaaatcaacctcacaatccgt 68440

                                                    
Query: 624   ctcaataatgctaactgcagaagcaggttttgcttcaac 662
              || ||||| || || || |||| ||||||||| |||||
Sbjct: 68439 ttcgataatactcacagctgaagaaggttttgcctcaac 68401
to top
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence
          Length = 120870

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                          
Query: 572    tttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataa 631
              |||||||||| |||||||| |  || || |||||||||||||||||||| |||||||| |
Sbjct: 110910 tttcaggttccttgtaatctaagggtggggcaaagtccacttcacagtcggtctcaatga 110851

                  
Query: 632    tgct 635
              ||||
Sbjct: 110850 tgct 110847
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>ref|XM_464339.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1397

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 574 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
           ||||||||||| || ||||| || || |||||||| ||||||||||| |||||||||||
Sbjct: 784 tcaggttctttatagtcaagtggtggagcaaagtcgacttcacagtcggtctcaataat 726
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                          
Query: 574     tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
               ||||||||||| || ||||| || || |||||||| ||||||||||| |||||||||||
Sbjct: 4565688 tcaggttctttatagtcaagtggtggagcaaagtcgacttcacagtcggtctcaataat 4565630
to top
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1297_C09
          Length = 163378

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                         
Query: 574    tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
              ||||||||||| || ||||| || || |||||||| ||||||||||| |||||||||||
Sbjct: 101067 tcaggttctttatagtcaagtggtggagcaaagtcgacttcacagtcggtctcaataat 101009
to top
>dbj|AK121784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A11, full
           insert sequence
          Length = 1398

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 574 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
           ||||||||||| || ||||| || || |||||||| ||||||||||| |||||||||||
Sbjct: 785 tcaggttctttatagtcaagtggtggagcaaagtcgacttcacagtcggtctcaataat 727
to top
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH081N08, complete sequence
          Length = 56991

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                         
Query: 573   ttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
             |||||| || ||||||||||| ||||| ||||| || || |||||||||||||| || ||
Sbjct: 12111 ttcaggctccttgtaatcaaggggaggcgcaaaatcaacctcacagtctgtctctatgat 12052

                                                 
Query: 633   gctaactgcagaagcaggttttgcttcaacaatatc 668
             ||| | | ||  |||||| |||| |||||| |||||
Sbjct: 12051 gctgattccattagcaggctttgtttcaactatatc 12016



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 457   ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttca 504
             ||||| |||||| |||| || |||||||| || |||||||||||||||
Sbjct: 12314 ccatctaaccgtcttccagatccagtgaaagggttgaactttggttca 12267
to top
>gb|BT016689.1| Zea mays clone Contig522 mRNA sequence
          Length = 1379

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 574 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
           |||||||||||||| ||||| || || |||||||| || ||||| || |||||||||||
Sbjct: 722 tcaggttctttgtagtcaagtggtggagcaaagtcaacctcacaatcggtctcaataat 664



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 457 ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttcatcttca 510
           |||||||| ||  |||||||||||||||| ||  ||||||||||||| ||||||
Sbjct: 830 ccatccaagcgccttcctgaaccagtgaaggggatgaactttggttcttcttca 777
to top
>gb|AY112612.1| Zea mays CL14668_1 mRNA sequence
          Length = 1298

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 574 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
           |||||||||||||| ||||| || || |||||||| || ||||| || |||||||||||
Sbjct: 690 tcaggttctttgtagtcaagtggtggagcaaagtcaacctcacaatcggtctcaataat 632



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 457 ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttcatcttca 510
           |||||||| ||  |||||||||||||||| ||  ||||||||||||| ||||||
Sbjct: 798 ccatccaagcgccttcctgaaccagtgaaggggatgaactttggttcttcttca 745
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                            
Query: 443      gttttgggcccttaccatccaaccgttttcctgaaccagtgaatggtttgaactttggtt 502
                |||||| | ||||||||||||| || || |||||||||||||||| | |||| | ||| |
Sbjct: 18826010 gttttgaggccttaccatccaaacgattccctgaaccagtgaatgctctgaattctggct 18826069

                      
Query: 503      catctt 508
                ||||||
Sbjct: 18826070 catctt 18826075



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 169      agcagctaacgcttcaaggagtagctcttcccagtgaacgcgttgaacttcggttcttcc 228
                ||||||||||| ||||| ||||||||| ||||||  || || | |||||| || ||||||
Sbjct: 18825736 agcagctaacgtttcaacgagtagctcgtcccagaaaatgcttggaacttgggctcttcc 18825795

                     
Query: 229      ttctt 233
                |||||
Sbjct: 18825796 ttctt 18825800



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 571      ttttcaggttctttgtaatcaagaggaggtgc 602
                |||||||||||||||||||| || ||||||||
Sbjct: 18826138 ttttcaggttctttgtaatcgagtggaggtgc 18826169
to top
>dbj|AK120576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C24, full
            insert sequence
          Length = 2233

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 443  gttttgggcccttaccatccaaccgttttcctgaaccagtgaatggtttgaactttggtt 502
            |||||| | ||||||||||||| || || |||||||||||||||| | |||| | ||| |
Sbjct: 1912 gttttgaggccttaccatccaaacgattccctgaaccagtgaatgctctgaattctggct 1853

                  
Query: 503  catctt 508
            ||||||
Sbjct: 1852 catctt 1847



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 169  agcagctaacgcttcaaggagtagctcttcccagtgaacgcgttgaacttcggttcttcc 228
            ||||||||||| ||||| ||||||||| ||||||  || || | |||||| || ||||||
Sbjct: 2186 agcagctaacgtttcaacgagtagctcgtcccagaaaatgcttggaacttgggctcttcc 2127

                 
Query: 229  ttctt 233
            |||||
Sbjct: 2126 ttctt 2122



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 571  ttttcaggttctttgtaatcaagaggaggtgc 602
            |||||||||||||||||||| || ||||||||
Sbjct: 1784 ttttcaggttctttgtaatcgagtggaggtgc 1753
to top
>dbj|AK099770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D01, full
           insert sequence
          Length = 2836

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 443 gttttgggcccttaccatccaaccgttttcctgaaccagtgaatggtttgaactttggtt 502
           |||||| | ||||||||||||| || || |||||||||||||||| | |||| | ||| |
Sbjct: 911 gttttgaggccttaccatccaaacgattccctgaaccagtgaatgctctgaattctggct 852

                 
Query: 503 catctt 508
           ||||||
Sbjct: 851 catctt 846



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 169  agcagctaacgcttcaaggagtagctcttcccagtgaacgcgttgaacttcggttcttcc 228
            ||||||||||| ||||| ||||||||| ||||||  || || | |||||| || ||||||
Sbjct: 1184 agcagctaacgtttcaacgagtagctcgtcccagaaaatgcttggaacttgggctcttcc 1125

                 
Query: 229  ttctt 233
            |||||
Sbjct: 1124 ttctt 1120



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 571 ttttcaggttctttgtaatcaagaggaggtgc 602
           |||||||||||||||||||| || ||||||||
Sbjct: 783 ttttcaggttctttgtaatcgagtggaggtgc 752
to top
>emb|BX571771.5| Zebrafish DNA sequence from clone CH211-160F8 in linkage group 21,
             complete sequence
          Length = 162245

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 653   ttgcttcaacaatatcaatataa 675
             |||||||||||||||||||||||
Sbjct: 21403 ttgcttcaacaatatcaatataa 21425
to top
>ref|XM_627931.1| Cryptosporidium parvum Iowa II DHHC family palmitoyl transferases
            with 4 transmembrane domains (cgd1_820), partial mRNA
          Length = 2295

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 649  ggttttgcttcaacaatatcaatataa 675
            |||||| ||||||||||||||||||||
Sbjct: 1361 ggttttccttcaacaatatcaatataa 1335
to top
>ref|XM_660972.1| Cryptosporidium hominis TU502 binding protein (Chro.10101), partial
            mRNA
          Length = 2295

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 649  ggttttgcttcaacaatatcaatataa 675
            |||||| ||||||||||||||||||||
Sbjct: 1361 ggttttccttcaacaatatcaatataa 1335
to top
>emb|BX640583.7| Zebrafish DNA sequence from clone CH211-186C22 in linkage group 21,
              complete sequence
          Length = 130141

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 653    ttgcttcaacaatatcaatataa 675
              |||||||||||||||||||||||
Sbjct: 112223 ttgcttcaacaatatcaatataa 112201
to top
>gb|DQ270212.1| Pristionchus pacificus EGL-17 (egl-17) mRNA, egl-17-tu312 allele,
           complete cds
          Length = 798

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 222 ttcttccttcttcggaggttcg 243
           ||||||||||||||||||||||
Sbjct: 591 ttcttccttcttcggaggttcg 570
to top
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence
          Length = 225376

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   cttctccctctttcttgctgc 289
             |||||||||||||||||||||
Sbjct: 92657 cttctccctctttcttgctgc 92637
to top
>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence
          Length = 186155

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 527   cttcagcaggtgccttgcctg 547
             |||||||||||||||||||||
Sbjct: 67731 cttcagcaggtgccttgcctg 67711
to top
>gb|AY190954.1| Drosophila virilis clone DVIF01_17_B21 (D1423) genomic sequence
          Length = 43155

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    ttatcgagctaaactgtttat 42
             |||||||||||||||||||||
Sbjct: 31720 ttatcgagctaaactgtttat 31740
to top
>gb|AC139512.20| Mus musculus chromosome 6, clone RP24-540G13, complete sequence
          Length = 179236

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   caaacacaagctttcctgttt 322
             |||||||||||||||||||||
Sbjct: 94923 caaacacaagctttcctgttt 94903
to top
>gb|U09989.1|ZMU09989 Zea mays D3L H(+)-transporting ATPase (Mha1) gene, complete cds
          Length = 9285

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 654  tgcttcaacaatatcaatata 674
            |||||||||||||||||||||
Sbjct: 7646 tgcttcaacaatatcaatata 7626
to top
>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence
          Length = 220437

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 527   cttcagcaggtgccttgcctg 547
             |||||||||||||||||||||
Sbjct: 51627 cttcagcaggtgccttgcctg 51647
to top
>emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in linkage group 2,
             complete sequence
          Length = 184594

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 378   tttgtttgtgtctgaaggtgc 398
             |||||||||||||||||||||
Sbjct: 16002 tttgtttgtgtctgaaggtgc 16022
to top
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence
          Length = 201379

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 575    caggttctttgtaatcaagag 595
              |||||||||||||||||||||
Sbjct: 163611 caggttctttgtaatcaagag 163631
to top
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 654     tgcttcaacaatatcaatata 674
               |||||||||||||||||||||
Sbjct: 2066809 tgcttcaacaatatcaatata 2066829
to top
>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence
          Length = 192344

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 575   caggttctttgtaatcaagag 595
             |||||||||||||||||||||
Sbjct: 39225 caggttctttgtaatcaagag 39245
to top
>gb|AC153740.3| Colobus guereza clone CH272-157M1, complete sequence
          Length = 200890

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 51278 tgtttataaacaatttcctt 51297
to top
>gb|AC158412.4| Cercopithecus aethiops clone CH252-436N4, complete sequence
          Length = 213834

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 27821 tgtttataaacaatttcctt 27840
to top
>ref|NM_001036307.1| Arabidopsis thaliana unknown protein AT2G21270 transcript variant
            AT2G21270.2 mRNA, complete cds
          Length = 1716

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 457  ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttca 504
            ||||| |||||| |||| || || ||||| || |||||||||||||||
Sbjct: 1190 ccatctaaccgtcttccagatccggtgaaagggttgaactttggttca 1143



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 77/96 (80%)
 Strand = Plus / Minus

                                                                        
Query: 573  ttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
            |||||| || |||||||| || |||||||| || || || ||||||||||| || || ||
Sbjct: 1080 ttcaggctccttgtaatcgaggggaggtgcgaaatcaacctcacagtctgtttctatgat 1021

                                                
Query: 633  gctaactgcagaagcaggttttgcttcaacaatatc 668
            ||| | |||   |||||| |||| |||||| |||||
Sbjct: 1020 gctgattgcgttagcaggctttgtttcaactatatc 985
to top
>ref|NM_127699.2| Arabidopsis thaliana unknown protein AT2G21270 transcript variant
           AT2G21270.1 mRNA, complete cds
          Length = 1204

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 457 ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttca 504
           ||||| |||||| |||| || || ||||| || |||||||||||||||
Sbjct: 781 ccatctaaccgtcttccagatccggtgaaagggttgaactttggttca 734



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 77/96 (80%)
 Strand = Plus / Minus

                                                                       
Query: 573 ttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
           |||||| || |||||||| || |||||||| || || || ||||||||||| || || ||
Sbjct: 671 ttcaggctccttgtaatcgaggggaggtgcgaaatcaacctcacagtctgtttctatgat 612

                                               
Query: 633 gctaactgcagaagcaggttttgcttcaacaatatc 668
           ||| | |||   |||||| |||| |||||| |||||
Sbjct: 611 gctgattgcgttagcaggctttgtttcaactatatc 576
to top
>gb|AY587885.1| Triticum aestivum ubiquitin fusion degradation protein (UFD1) mRNA,
           complete cds
          Length = 1135

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 574 tcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaat 629
           ||||||||||| || ||||| || || |||||||| || ||||| || ||||||||
Sbjct: 708 tcaggttctttatagtcaagtggtggggcaaagtcaacctcacaatcagtctcaat 653
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>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 24869 tgtttataaacaatttcctt 24888
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>gb|AC147187.2| Pan troglodytes clone CH251-116A11, complete sequence
          Length = 160822

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 24869 tgtttataaacaatttcctt 24888
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 407      cagccgcagcagcgtaagaa 426
                ||||||||||||||||||||
Sbjct: 14051513 cagccgcagcagcgtaagaa 14051532
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>emb|BX927362.10| Zebrafish DNA sequence from clone CH211-170N20 in linkage group 6,
             complete sequence
          Length = 131893

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   cttgaaccaaacacaagctt 314
             ||||||||||||||||||||
Sbjct: 14721 cttgaaccaaacacaagctt 14740
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>gb|AC146115.2| Pan troglodytes BAC clone RP43-38M17 from 7, complete sequence
          Length = 204127

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tgtttataaacaatttcctt 55
              ||||||||||||||||||||
Sbjct: 104114 tgtttataaacaatttcctt 104095
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>ref|XM_816528.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508461.290) partial mRNA
          Length = 1707

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 209 cgttgaacttcggttcttccttct 232
           |||||| |||||||||||||||||
Sbjct: 442 cgttgagcttcggttcttccttct 419
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>emb|AL954816.21| Zebrafish DNA sequence from clone DKEY-38P6 in linkage group 10,
             complete sequence
          Length = 97637

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   cttgaaccaaacacaagctt 314
             ||||||||||||||||||||
Sbjct: 69025 cttgaaccaaacacaagctt 69006
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>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence
          Length = 183991

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   tggtttgcccttttgtttgt 386
             ||||||||||||||||||||
Sbjct: 92349 tggtttgcccttttgtttgt 92368
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>gb|AC073130.3| Homo sapiens BAC clone RP11-667F14 from 7, complete sequence
          Length = 203403

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 99235 tgtttataaacaatttcctt 99254
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>gb|AC006024.1| Homo sapiens PAC clone RP5-1166G19 from 7, complete sequence
          Length = 90583

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   tttttcaggttctttgtaat 589
             ||||||||||||||||||||
Sbjct: 59101 tttttcaggttctttgtaat 59120
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>gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, complete sequence
          Length = 196300

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 361   gtttgctggtttgcccttttgttt 384
             ||||| ||||||||||||||||||
Sbjct: 53878 gtttgttggtttgcccttttgttt 53901
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>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0022F22, from chromosome 3, complete sequence
          Length = 144268

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   cagccgcagcagcgtaagaa 426
             ||||||||||||||||||||
Sbjct: 61192 cagccgcagcagcgtaagaa 61211
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>emb|AL662882.13| Mouse DNA sequence from clone RP23-187N13 on chromosome 11, complete
              sequence
          Length = 222359

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 269    cttctccctctttcttgctgcttg 292
              ||||||||||||||||||| ||||
Sbjct: 175030 cttctccctctttcttgcttcttg 175007
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>emb|BX324181.26| Zebrafish DNA sequence from clone CH211-203O8 in linkage group 4,
             complete sequence
          Length = 141840

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   cttgaaccaaacacaagctt 314
             ||||||||||||||||||||
Sbjct: 15033 cttgaaccaaacacaagctt 15052
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>emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 in linkage group 17,
             complete sequence
          Length = 161999

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 267   tgcttctccctctttcttgctgct 290
             |||||||| |||||||||||||||
Sbjct: 78627 tgcttctctctctttcttgctgct 78604
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>gb|AC171744.3| Nomascus leucogenys leucogenys clone CH271-119I21, complete sequence
          Length = 130987

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 10066 tgtttataaacaatttcctt 10085
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>gb|AC166002.3| Nomascus leucogenys leucogenys clone CH271-400K18, complete sequence
          Length = 195728

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     tgtttataaacaatttcctt 55
              ||||||||||||||||||||
Sbjct: 191792 tgtttataaacaatttcctt 191811
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>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete
            sequence
          Length = 125045

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 457  ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttca 504
            ||||| |||||| |||| || || ||||| || |||||||||||||||
Sbjct: 6675 ccatctaaccgtcttccagatccggtgaaagggttgaactttggttca 6628



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 77/96 (80%)
 Strand = Plus / Minus

                                                                        
Query: 573  ttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
            |||||| || |||||||| || |||||||| || || || ||||||||||| || || ||
Sbjct: 6471 ttcaggctccttgtaatcgaggggaggtgcgaaatcaacctcacagtctgtttctatgat 6412

                                                
Query: 633  gctaactgcagaagcaggttttgcttcaacaatatc 668
            ||| | |||   |||||| |||| |||||| |||||
Sbjct: 6411 gctgattgcgttagcaggctttgtttcaactatatc 6376
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>gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chromosome 7, complete
             sequence
          Length = 154065

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   tttttcaggttctttgtaat 589
             ||||||||||||||||||||
Sbjct: 37048 tttttcaggttctttgtaat 37067
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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 12004 tgtttataaacaatttcctt 12023
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 407      cagccgcagcagcgtaagaa 426
                ||||||||||||||||||||
Sbjct: 14046488 cagccgcagcagcgtaagaa 14046507
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>emb|BX819179.1|CNS0AA8E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB54ZB11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1551

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 457  ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttca 504
            ||||| |||||| |||| || || ||||| || |||||||||||||||
Sbjct: 1189 ccatctaaccgtcttccagatccggtgaaagggttgaactttggttca 1142
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 27821 tgtttataaacaatttcctt 27840
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>gb|AC098872.5| Homo sapiens BAC clone RP11-773P9 from 2, complete sequence
          Length = 178804

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ataaacaatttccttcagat 60
             ||||||||||||||||||||
Sbjct: 49415 ataaacaatttccttcagat 49396
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>gb|AC023827.7| Homo sapiens chromosome 16 clone RP11-42I10, complete sequence
          Length = 152813

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 567   tggtttttcaggttctttgtaatc 590
             |||||||||| |||||||||||||
Sbjct: 61943 tggtttttcatgttctttgtaatc 61966
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>gb|AC007611.5|AC007611 Homo sapiens chromosome 16 clone RP11-452G23, complete sequence
          Length = 158958

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 567  tggtttttcaggttctttgtaatc 590
            |||||||||| |||||||||||||
Sbjct: 2247 tggtttttcatgttctttgtaatc 2270
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>gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, complete sequence
          Length = 163408

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   ttgatcttcagcaggtgcct 541
             ||||||||||||||||||||
Sbjct: 92729 ttgatcttcagcaggtgcct 92710
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>gb|AF260225.1|AF260225 Homo sapiens TESTIN 2 and TESTIN 3 genes, complete cds, alternatively
             spliced
          Length = 162354

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 11697 tgtttataaacaatttcctt 11716
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>ref|XM_573634.1| PREDICTED: Rattus norvegicus Huntington disease gene homolog (Hdh),
            mRNA
          Length = 9975

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 636  aactgcagaagcaggttttg 655
            ||||||||||||||||||||
Sbjct: 4331 aactgcagaagcaggttttg 4350
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>gb|AY087347.1| Arabidopsis thaliana clone 34470 mRNA, complete sequence
          Length = 1201

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 457 ccatccaaccgttttcctgaaccagtgaatggtttgaactttggttca 504
           ||||| |||||| |||| || || ||||| || |||||||||||||||
Sbjct: 781 ccatctaaccgtcttccagatcccgtgaaagggttgaactttggttca 734



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 77/96 (80%)
 Strand = Plus / Minus

                                                                       
Query: 573 ttcaggttctttgtaatcaagaggaggtgcaaagtccacttcacagtctgtctcaataat 632
           |||||| || |||||||| || |||||||| || || || ||||||||||| || || ||
Sbjct: 671 ttcaggctccttgtaatcgaggggaggtgcgaaatcaacctcacagtctgtttctatgat 612

                                               
Query: 633 gctaactgcagaagcaggttttgcttcaacaatatc 668
           ||| | |||   |||||| |||| |||||| |||||
Sbjct: 611 gctgattgcgttagcaggctttgtttcaactatatc 576
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>emb|BX004868.9| Zebrafish DNA sequence from clone DKEY-209F8, complete sequence
          Length = 153986

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    cttgaaccaaacacaagctt 314
              ||||||||||||||||||||
Sbjct: 136414 cttgaaccaaacacaagctt 136433
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>emb|BX004870.13| Zebrafish DNA sequence from clone CH211-168H9 in linkage group 5,
              complete sequence
          Length = 153127

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    cttgaaccaaacacaagctt 314
              ||||||||||||||||||||
Sbjct: 140647 cttgaaccaaacacaagctt 140628
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>dbj|AK108428.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-A09, full
           insert sequence
          Length = 1115

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 cagccgcagcagcgtaagaa 426
           ||||||||||||||||||||
Sbjct: 997 cagccgcagcagcgtaagaa 978
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>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence
          Length = 188569

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 361   gtttgctggtttgcccttttgttt 384
             ||||| ||||||||||||||||||
Sbjct: 13349 gtttgttggtttgcccttttgttt 13326
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>gb|AC151364.3| Macaca mulatta clone CH250-142M15, complete sequence
          Length = 148725

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtttataaacaatttcctt 55
             ||||||||||||||||||||
Sbjct: 12004 tgtttataaacaatttcctt 12023
to top
>emb|CR385053.17| Zebrafish DNA sequence from clone DKEY-273G18 in linkage group 20,
              complete sequence
          Length = 163087

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    cttgaaccaaacacaagctt 314
              ||||||||||||||||||||
Sbjct: 109391 cttgaaccaaacacaagctt 109410
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>gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromosome unknown, complete
             sequence
          Length = 223748

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    aagtggagatacaaagttca 87
             ||||||||||||||||||||
Sbjct: 35903 aagtggagatacaaagttca 35922
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>gb|U18650.1|RNU18650 Rattus norvegicus Huntington gene product mRNA, complete cds
          Length = 9929

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 636  aactgcagaagcaggttttg 655
            ||||||||||||||||||||
Sbjct: 4283 aactgcagaagcaggttttg 4302
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>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete
             sequence
          Length = 230634

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ccttttgtttgtgtctgaag 394
             ||||||||||||||||||||
Sbjct: 21663 ccttttgtttgtgtctgaag 21644
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>gb|AY067340.1| Schmidtea mediterranea clone H.40.10h unknown mRNA sequence
          Length = 894

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 658 tcaacaatatcaatataata 677
           ||||||||||||||||||||
Sbjct: 146 tcaacaatatcaatataata 165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,023,257
Number of Sequences: 3902068
Number of extensions: 7023257
Number of successful extensions: 140660
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140196
Number of HSP's gapped (non-prelim): 461
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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