>GUAA_HELHP (Q7VG78) Probable GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 1375

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 675 GKGLGQEVTLMMMSFAVEKYGIHTFRAKISDSNTASLKLFRKL 547
           GKG G EV  M + +  E  G+      I + NTAS+K+ ++L
Sbjct: 415 GKGYGSEVARMCVKYGFETLGLEEVYCLIKEDNTASIKVAKRL 457

>HPS6_RAT (Q7M733) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye|
           protein homolog) (Ruby-eye-like protein) (Ru)
          Length = 809

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +2

Query: 110 KHQAPP----QLLRNPTQGSSYYCYILPPFQNKCRC 205
           + QAPP    ++LR PT G  +   ILPPF+  C+C
Sbjct: 536 RSQAPPDVWKKVLRAPTAGKEHPNGILPPFELLCQC 571

>HPS6_MOUSE (Q8BLY7) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye|
           protein) (Ru)
          Length = 805

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +2

Query: 110 KHQAPP----QLLRNPTQGSSYYCYILPPFQNKCRC 205
           + QAPP    ++LR PT G  +   ILPPF+  C+C
Sbjct: 536 RSQAPPDVWKKVLRAPTAGKEHPNGILPPFELLCQC 571

>YP20_BACLI (P05332) Hypothetical P20 protein|
          Length = 178

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -3

Query: 675 GKGLGQEVTLMMMSFAVEKYGIHTFRAKISDSNTASLKLFRKLGFK 538
           GKG   E    ++ +      ++   AK+   NT S+KL   L F+
Sbjct: 103 GKGFASEAVQKLIDYGFTSLNLNRIEAKVEPENTPSIKLLNSLSFQ 148

>BLTD_BACSU (P39909) Spermine/spermidine acetyltransferase (EC 2.3.1.57)|
          Length = 152

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 12/50 (24%), Positives = 29/50 (58%)
 Frame = -3

Query: 687 QKSRGKGLGQEVTLMMMSFAVEKYGIHTFRAKISDSNTASLKLFRKLGFK 538
           ++ +GKGLG+++   ++    E Y        I ++N  +++L+++ GF+
Sbjct: 86  ERYQGKGLGKKMLKALIQHLAELYKCKRIYLSIFENNIHAIRLYQRFGFQ 135

>Y1062_METJA (Q58462) Hypothetical protein MJ1062|
          Length = 484

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 675 GKGLGQEVTLMMMSFAVEKYGIHTFRAKISDSNTASLKLFRKLGFK 538
           GK +G+    +++ + ++  G     A+I ++N  S+KLF  LGFK
Sbjct: 424 GKHIGRHSVSLVLKW-LKNIGYKKAHARILENNIRSIKLFESLGFK 468

>HTPG_HELPY (P56116) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 621

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
 Frame = -3

Query: 687 QKSRGKGLGQEVTLMMMSFAVEKYGIHTFRAKI-SDSNTA----SLKLFRKLGFKDASHS 523
           QKS    LG+ + L+  S  +EKY    +   + SD   A     +  + K  FKDASHS
Sbjct: 428 QKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPFKDASHS 487

Query: 522 AVFKEVTLE 496
              KE+ LE
Sbjct: 488 ESLKELGLE 496

>YNCA_ECOLI (P76112) Hypothetical acetyltransferase yncA (EC 2.3.1.-)|
          Length = 172

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -3

Query: 678 RGKGLGQEVTLMMMSFAVEKYGIHTFRAKISDSNTASLKLFRKLGF 541
           +GKGLG+++   ++  A +  G H   A I   N ASL L + LGF
Sbjct: 92  QGKGLGRKLLSRLIDEARD-CGKHVMVAGIESQNQASLHLHQSLGF 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,653,853
Number of Sequences: 219361
Number of extensions: 2070240
Number of successful extensions: 4484
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4484
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 8015081512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)