ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1n22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 3e-11
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
4gb|AC131129.4| Rattus norvegicus 17 BAC CH230-15O20 (Children's ... 44 0.45
5gb|AC162458.4| Mus musculus chromosome 19, clone RP24-140G9, com... 44 0.45
6gb|AC102779.6| Mus musculus chromosome 19, clone RP23-460A15, co... 44 0.45
7gb|AC153811.1| Homo sapiens chromosome 5 clone fa0925, complete ... 42 1.8
8emb|Z54218.1|CEF37B12 Caenorhabditis elegans Cosmid F37B12, comp... 42 1.8
9emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chrom... 42 1.8
10emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in... 42 1.8
11gb|AC114316.2| Homo sapiens chromosome 5 clone RP11-348J24, comp... 42 1.8
12gb|AC104826.5| Homo sapiens BAC clone RP11-775M3 from 4, complet... 42 1.8
13gb|AC113420.2| Homo sapiens chromosome 5 clone RP11-586E1, compl... 42 1.8
14gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, comp... 42 1.8
15gb|AC138990.2| Homo sapiens chromosome 5 clone RP13-708P15, comp... 42 1.8
16ref|NM_128594.2| Arabidopsis thaliana KIS (KIESEL); unfolded pro... 40 7.0
17gb|AC157899.5| Mus musculus chromosome 15, clone RP23-98F15, com... 40 7.0
18gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, co... 40 7.0
19gb|AC146391.4| Pan troglodytes BAC clone RP43-56L16 from 7, comp... 40 7.0
20gb|AC146232.2| Pan troglodytes BAC clone RP43-27C6 from 7, compl... 40 7.0
21gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosom... 40 7.0
22gb|AC124515.4| Mus musculus BAC clone RP23-381E19 from chromosom... 40 7.0
23ref|XM_851487.1| PREDICTED: Canis familiaris similar to Legumain... 40 7.0
24ref|XM_537355.2| PREDICTED: Canis familiaris similar to Legumain... 40 7.0
25gb|AC092647.2| Homo sapiens BAC clone RP11-419M24 from 7, comple... 40 7.0
26gb|AC118004.6| Mus musculus chromosome 16, clone RP23-212P2, com... 40 7.0
27gb|AY050952.1| Arabidopsis thaliana putative TCP1-chaperonin cof... 40 7.0
28gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 7.0
29gb|AC156575.3| Mus musculus BAC clone RP23-4P20 from chromosome ... 40 7.0
30emb|AL805927.4| Mouse DNA sequence from clone RP24-221D22 on chr... 40 7.0
31emb|CR860355.1| Pongo pygmaeus mRNA; cDNA DKFZp459A0313 (from cl... 40 7.0
32emb|CR855999.1| Human DNA sequence from clone XX-NCIH2171_12H10,... 40 7.0
33emb|CR855280.1| Human DNA sequence from clone XX-NCIH2171_1M02, ... 40 7.0
34gb|AC084346.3| Homo sapiens chromosome 8, clone RP3-388N13, comp... 40 7.0
35emb|BX465189.9| Zebrafish DNA sequence from clone RP71-47G15 in ... 40 7.0
36gb|U93215.3| Arabidopsis thaliana chromosome 2 BAC T6B20 genomic... 40 7.0
37gb|AC002338.3| Arabidopsis thaliana chromosome 2 clone T9D9 map ... 40 7.0
38emb|AL845159.4| Mouse DNA sequence from clone RP23-263O22 on chr... 40 7.0
39gb|AC008491.6|AC008491 Homo sapiens chromosome 5 clone CTC-426L2... 40 7.0
40emb|BX821991.1|CNS0AA3F Arabidopsis thaliana Full-length cDNA Co... 40 7.0
41gb|AC011310.3|AC011310 Homo sapiens BAC clone CTD-2590C17 from 7... 40 7.0
42gb|AY085814.1| Arabidopsis thaliana clone 1853 mRNA, complete se... 40 7.0
43gb|AC018637.3|AC018637 Human Chromosome 7 clone RP11-175P8, comp... 40 7.0
44dbj|BS000233.1| Pan troglodytes chromosome 22 clone:CH251-445J22... 40 7.0
45dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.0
46gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HB... 40 7.0
47dbj|AP004282.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.0
48dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 7.0 
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02
             map near S13580, complete sequence
          Length = 88044

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                         
Query: 433   atggcctttggccgtccataatttagcaccatcacaaactcttccgcaggggagcctaca 492
             |||||||||||||| |||||| |||||||||| |||||||| |  |||||||||||||  
Sbjct: 30568 atggcctttggccgcccataagttagcaccattacaaactccttggcaggggagcctatc 30509

                                        
Query: 493   atggcctgtgttgcctgcggtgatcgc 519
             |||| |||||||| ||| | |||||||
Sbjct: 30508 atggtctgtgttgtctgtgttgatcgc 30482
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                            
Query: 433      atggcctttggccgtccataatttagcaccatcacaaactcttccgcaggggagcctaca 492
                |||||||||||||| |||||| |||||||||| |||||||| |  |||||||||||||  
Sbjct: 24060917 atggcctttggccgcccataagttagcaccattacaaactccttggcaggggagcctatc 24060976

                                           
Query: 493      atggcctgtgttgcctgcggtgatcgc 519
                |||| |||||||| ||| | |||||||
Sbjct: 24060977 atggtctgtgttgtctgtgttgatcgc 24061003
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                            
Query: 433      atggcctttggccgtccataatttagcaccatcacaaactcttccgcaggggagcctaca 492
                |||||||||||||| |||||| |||||||||| |||||||| |  |||||||||||||  
Sbjct: 23978386 atggcctttggccgcccataagttagcaccattacaaactccttggcaggggagcctatc 23978445

                                           
Query: 493      atggcctgtgttgcctgcggtgatcgc 519
                |||| |||||||| ||| | |||||||
Sbjct: 23978446 atggtctgtgttgtctgtgttgatcgc 23978472
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>gb|AC131129.4| Rattus norvegicus 17 BAC CH230-15O20 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 232401

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 217    aagaacaacaatacctaccaac 238
              ||||||||||||||||||||||
Sbjct: 209965 aagaacaacaatacctaccaac 209986
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>gb|AC162458.4| Mus musculus chromosome 19, clone RP24-140G9, complete sequence
          Length = 212469

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 225    caatacctaccaacatgaatga 246
              ||||||||||||||||||||||
Sbjct: 138939 caatacctaccaacatgaatga 138960
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>gb|AC102779.6| Mus musculus chromosome 19, clone RP23-460A15, complete sequence
          Length = 214504

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 225    caatacctaccaacatgaatga 246
              ||||||||||||||||||||||
Sbjct: 158079 caatacctaccaacatgaatga 158100
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>gb|AC153811.1| Homo sapiens chromosome 5 clone fa0925, complete sequence
          Length = 40008

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   tgaatgaatacatgaatatgt 260
             |||||||||||||||||||||
Sbjct: 32825 tgaatgaatacatgaatatgt 32805
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>emb|Z54218.1|CEF37B12 Caenorhabditis elegans Cosmid F37B12, complete sequence
          Length = 33950

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   tccctctctttatatccaatc 150
             |||||||||||||||||||||
Sbjct: 16493 tccctctctttatatccaatc 16513
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>emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chromosome 17, complete
              sequence
          Length = 177939

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    catttttcatctatctttggt 178
              |||||||||||||||||||||
Sbjct: 156707 catttttcatctatctttggt 156687
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>emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in linkage group 21,
              complete sequence
          Length = 216476

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 326    ctttcgacaacctcttccatt 346
              |||||||||||||||||||||
Sbjct: 206318 ctttcgacaacctcttccatt 206338
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>gb|AC114316.2| Homo sapiens chromosome 5 clone RP11-348J24, complete sequence
          Length = 187136

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 240  tgaatgaatacatgaatatgt 260
            |||||||||||||||||||||
Sbjct: 2026 tgaatgaatacatgaatatgt 2006
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>gb|AC104826.5| Homo sapiens BAC clone RP11-775M3 from 4, complete sequence
          Length = 138604

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 237    acatgaatgaatacatgaata 257
              |||||||||||||||||||||
Sbjct: 103993 acatgaatgaatacatgaata 104013
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>gb|AC113420.2| Homo sapiens chromosome 5 clone RP11-586E1, complete sequence
          Length = 176267

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 238   catgaatgaatacatgaatat 258
             |||||||||||||||||||||
Sbjct: 53458 catgaatgaatacatgaatat 53478
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>gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, complete sequence
          Length = 184635

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 238    catgaatgaatacatgaatat 258
              |||||||||||||||||||||
Sbjct: 179583 catgaatgaatacatgaatat 179603
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>gb|AC138990.2| Homo sapiens chromosome 5 clone RP13-708P15, complete sequence
          Length = 125439

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    tgaatgaatacatgaatatgt 260
              |||||||||||||||||||||
Sbjct: 116171 tgaatgaatacatgaatatgt 116191
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>ref|NM_128594.2| Arabidopsis thaliana KIS (KIESEL); unfolded protein binding
           AT2G30410 (KIS) mRNA, complete cds
          Length = 715

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ggaatcgaagaacaacaata 229
           ||||||||||||||||||||
Sbjct: 82  ggaatcgaagaacaacaata 63
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>gb|AC157899.5| Mus musculus chromosome 15, clone RP23-98F15, complete sequence
          Length = 199372

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 216   gaagaacaacaatacctaccaaca 239
             |||||||||||||||| |||||||
Sbjct: 53981 gaagaacaacaataccaaccaaca 54004
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>gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, complete sequence
          Length = 206675

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 216    gaagaacaacaatacctaccaaca 239
              |||||||||||||||| |||||||
Sbjct: 122063 gaagaacaacaataccaaccaaca 122086
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>gb|AC146391.4| Pan troglodytes BAC clone RP43-56L16 from 7, complete sequence
          Length = 155929

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   atgaatgaatacatgaatat 258
             ||||||||||||||||||||
Sbjct: 47481 atgaatgaatacatgaatat 47500
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>gb|AC146232.2| Pan troglodytes BAC clone RP43-27C6 from 7, complete sequence
          Length = 169663

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   catgaatgaatacatgaata 257
             ||||||||||||||||||||
Sbjct: 84757 catgaatgaatacatgaata 84776
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>gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosome 5, complete sequence
          Length = 154808

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    atgaatgaatacatgaatat 258
              ||||||||||||||||||||
Sbjct: 129036 atgaatgaatacatgaatat 129017
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>gb|AC124515.4| Mus musculus BAC clone RP23-381E19 from chromosome 13, complete
             sequence
          Length = 175354

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 215   cgaagaacaacaatacctaccaac 238
             ||||||||||||||||| ||||||
Sbjct: 91815 cgaagaacaacaataccaaccaac 91838
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>ref|XM_851487.1| PREDICTED: Canis familiaris similar to Legumain precursor
           (Asparaginyl endopeptidase) (Protease, cysteine 1),
           transcript variant 2 (LOC480232), mRNA
          Length = 2199

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 tctaaagatcatttttcatc 168
           ||||||||||||||||||||
Sbjct: 769 tctaaagatcatttttcatc 750
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>ref|XM_537355.2| PREDICTED: Canis familiaris similar to Legumain precursor
            (Asparaginyl endopeptidase) (Protease, cysteine 1),
            transcript variant 1 (LOC480232), mRNA
          Length = 3113

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  tctaaagatcatttttcatc 168
            ||||||||||||||||||||
Sbjct: 1683 tctaaagatcatttttcatc 1664
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>gb|AC092647.2| Homo sapiens BAC clone RP11-419M24 from 7, complete sequence
          Length = 163891

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   catgaatgaatacatgaata 257
             ||||||||||||||||||||
Sbjct: 28593 catgaatgaatacatgaata 28612
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>gb|AC118004.6| Mus musculus chromosome 16, clone RP23-212P2, complete sequence
          Length = 205796

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 216   gaagaacaacaatacctaccaaca 239
             |||||||||||||| |||||||||
Sbjct: 66404 gaagaacaacaatatctaccaaca 66427
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>gb|AY050952.1| Arabidopsis thaliana putative TCP1-chaperonin cofactor A isolog
           (At2g30410) mRNA, complete cds
          Length = 710

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ggaatcgaagaacaacaata 229
           ||||||||||||||||||||
Sbjct: 61  ggaatcgaagaacaacaata 42
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     tggctatggcagaaaaaacc 381
               ||||||||||||||||||||
Sbjct: 5343616 tggctatggcagaaaaaacc 5343635
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>gb|AC156575.3| Mus musculus BAC clone RP23-4P20 from chromosome 13, complete sequence
          Length = 196560

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 215    cgaagaacaacaatacctaccaac 238
              ||||||||||||||||| ||||||
Sbjct: 174987 cgaagaacaacaataccaaccaac 175010
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>emb|AL805927.4| Mouse DNA sequence from clone RP24-221D22 on chromosome 4 Contains a
              novel pseudogene, complete sequence
          Length = 141669

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 216    gaagaacaacaatacctaccaaca 239
              |||||||||||||||| |||||||
Sbjct: 101769 gaagaacaacaataccaaccaaca 101746
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>emb|CR860355.1| Pongo pygmaeus mRNA; cDNA DKFZp459A0313 (from clone DKFZp459A0313)
          Length = 1900

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 455  ttagcaccatcacaaactct 474
            ||||||||||||||||||||
Sbjct: 1146 ttagcaccatcacaaactct 1165
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>emb|CR855999.1| Human DNA sequence from clone XX-NCIH2171_12H10, complete sequence
          Length = 116906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   acatgaatgaatacatgaat 256
             ||||||||||||||||||||
Sbjct: 56916 acatgaatgaatacatgaat 56897
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>emb|CR855280.1| Human DNA sequence from clone XX-NCIH2171_1M02, complete sequence
          Length = 132605

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   acatgaatgaatacatgaat 256
             ||||||||||||||||||||
Sbjct: 38368 acatgaatgaatacatgaat 38387
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>gb|AC084346.3| Homo sapiens chromosome 8, clone RP3-388N13, complete sequence
          Length = 128437

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   catgaatgaatacatgaatatgtc 261
             |||||||||||| |||||||||||
Sbjct: 32580 catgaatgaataaatgaatatgtc 32603
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>emb|BX465189.9| Zebrafish DNA sequence from clone RP71-47G15 in linkage group 23,
              complete sequence
          Length = 132715

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     catagtcatagtcatcctta 100
              ||||||||||||||||||||
Sbjct: 129816 catagtcatagtcatcctta 129835
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>gb|U93215.3| Arabidopsis thaliana chromosome 2 BAC T6B20 genomic sequence, complete
             sequence
          Length = 104861

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ggaatcgaagaacaacaata 229
             ||||||||||||||||||||
Sbjct: 93969 ggaatcgaagaacaacaata 93988
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>gb|AC002338.3| Arabidopsis thaliana chromosome 2 clone T9D9 map m283, complete
             sequence
          Length = 79272

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ggaatcgaagaacaacaata 229
             ||||||||||||||||||||
Sbjct: 75186 ggaatcgaagaacaacaata 75167
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>emb|AL845159.4| Mouse DNA sequence from clone RP23-263O22 on chromosome 2, complete
             sequence
          Length = 166493

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 216   gaagaacaacaatacctaccaaca 239
             |||||||||||||||| |||||||
Sbjct: 17782 gaagaacaacaataccaaccaaca 17805
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>gb|AC008491.6|AC008491 Homo sapiens chromosome 5 clone CTC-426L22, complete sequence
          Length = 143661

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   ggctggctatggcagaaaaa 378
             ||||||||||||||||||||
Sbjct: 56149 ggctggctatggcagaaaaa 56130
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>emb|BX821991.1|CNS0AA3F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL90ZF03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 642

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ggaatcgaagaacaacaata 229
           ||||||||||||||||||||
Sbjct: 57  ggaatcgaagaacaacaata 38
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>gb|AC011310.3|AC011310 Homo sapiens BAC clone CTD-2590C17 from 7p11.2-p21, complete sequence
          Length = 142834

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   atgaatgaatacatgaatat 258
             ||||||||||||||||||||
Sbjct: 32172 atgaatgaatacatgaatat 32191
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>gb|AY085814.1| Arabidopsis thaliana clone 1853 mRNA, complete sequence
          Length = 569

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ggaatcgaagaacaacaata 229
           ||||||||||||||||||||
Sbjct: 41  ggaatcgaagaacaacaata 22
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>gb|AC018637.3|AC018637 Human Chromosome 7 clone RP11-175P8, complete sequence
          Length = 184571

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   atgaatgaatacatgaatat 258
             ||||||||||||||||||||
Sbjct: 47341 atgaatgaatacatgaatat 47360
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>dbj|BS000233.1| Pan troglodytes chromosome 22 clone:CH251-445J22, map 22, complete
              sequences
          Length = 163962

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    atgaatgaatacatgaatat 258
              ||||||||||||||||||||
Sbjct: 105335 atgaatgaatacatgaatat 105316
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>dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, section 92/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    atgaatgaatacatgaatat 258
              ||||||||||||||||||||
Sbjct: 296434 atgaatgaatacatgaatat 296415
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>gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HBa0323E19, complete
             sequence
          Length = 141216

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 157   tcatttttcatctatctttggtgt 180
             ||||||||||| ||||||||||||
Sbjct: 53555 tcatttttcatgtatctttggtgt 53578
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>dbj|AP004282.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1165G2
          Length = 250681

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 238    catgaatgaatacatgaatatgtc 261
              |||||||||||| |||||||||||
Sbjct: 193215 catgaatgaataaatgaatatgtc 193192
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>dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2007G4, MX1-D21S171
              region, complete sequence
          Length = 148179

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    atgaatgaatacatgaatat 258
              ||||||||||||||||||||
Sbjct: 100721 atgaatgaatacatgaatat 100702


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,348,628
Number of Sequences: 3902068
Number of extensions: 4348628
Number of successful extensions: 93844
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93695
Number of HSP's gapped (non-prelim): 149
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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