ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33n04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ606031.1| Triticum aestivum partial mRNA for putative pyri... 765 0.0
2gb|BT009021.1| Triticum aestivum clone wdk3c.pk007.j3:fis, full ... 745 0.0
3gb|AY107334.1| Zea mays PCO062090 mRNA sequence 383 e-103
4dbj|AK120153.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 7e-53
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
6dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
7ref|NM_114287.2| Arabidopsis thaliana disulfide oxidoreductase/ ... 44 0.54
8gb|AC148001.6| Mus musculus BAC clone RP24-82P9 from chromosome ... 44 0.54
9ref|XM_422763.1| PREDICTED: Gallus gallus similar to SUMO1/sentr... 44 0.54
10emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome 3, BA... 44 0.54
11gb|BT008451.1| Arabidopsis thaliana At3g44190 gene, complete cds 44 0.54
12emb|BX823155.1|CNS0A7AM Arabidopsis thaliana Full-length cDNA Co... 44 0.54
13emb|BX823570.1|CNS0A6LH Arabidopsis thaliana Full-length cDNA Co... 44 0.54
14gb|AY084651.1| Arabidopsis thaliana clone 114123 mRNA, complete ... 44 0.54
15gb|BT002026.1| Arabidopsis thaliana putative protein (At3g44190)... 44 0.54
16gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, com... 42 2.1
17gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome... 42 2.1
18gb|AC064856.5| Homo sapiens BAC clone RP11-264N11 from 2, comple... 42 2.1
19gb|AC160651.2| Pan troglodytes BAC clone CH251-489P13 from chrom... 42 2.1
20ref|NM_116172.3| Arabidopsis thaliana unknown protein AT3G63070 ... 40 8.4
21gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, co... 40 8.4
22gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, co... 40 8.4
23ref|XM_715689.1| Candida albicans SC5314 hypothetical protein (C... 40 8.4
24ref|XM_715560.1| Candida albicans SC5314 hypothetical protein (C... 40 8.4
25ref|XM_659299.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.4
26gb|AC125531.3| Mus musculus BAC clone RP23-396D12 from chromosom... 40 8.4
27gb|AC140359.2| Mus musculus BAC clone RP24-240P8 from chromosome... 40 8.4
28gb|AC122045.3| Mus musculus BAC clone RP24-449H18 from 5, comple... 40 8.4
29gb|AC166568.2| Spironucleus vortens clone JGIBAWF-9N8, complete ... 40 8.4
30gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome... 40 8.4
31emb|AL139328.8| Human DNA sequence from clone RP11-84N7 on chrom... 40 8.4
32emb|AL020995.14|HS117O3 Human DNA sequence from clone RP1-117O3 ... 40 8.4
33gb|AC074336.14| Mus musculus Strain C57BL6/J chromosome 1 BAC, R... 40 8.4
34emb|Z11595.1|EBHCOMPMR Eptatretus burgeri partial mRNA for hagfi... 40 8.4
35emb|AL022018.1|DMC8D8 Drosophila melanogaster cosmid clone 8D8 40 8.4
36gb|AC090881.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, R... 40 8.4
37gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell ... 40 8.4
38gb|AY119282.1| Drosophila melanogaster SD27341 full insert cDNA 40 8.4
39ref|NM_206602.1| Drosophila melanogaster CG11418-RB, transcript ... 40 8.4
40ref|NM_130548.2| Drosophila melanogaster CG11418-RA, transcript ... 40 8.4
41gb|AC106822.3| Homo sapiens chromosome 5 clone RP11-772C9, compl... 40 8.4
42gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell... 40 8.4
43gb|AC015468.5|AC015468 Homo sapiens chromosome 8, clone RP11-369... 40 8.4
44gb|AC019181.4| Homo sapiens BAC clone RP11-272E3 from 2, complet... 40 8.4
45gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.4
46gb|AC007385.3| Homo sapiens BAC clone RP11-325M10 from 2, comple... 40 8.4
47gb|AC006142.1|AC006142 Homo sapiens PAC clone RP4-572A3, complet... 40 8.4
48gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 o... 40 8.4
49emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on ch... 40 8.4
50gb|AC134554.6| Mus musculus BAC clone RP24-313F7 from chromosome... 40 8.4
51gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.40... 40 8.4
52emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, B... 40 8.4
53gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, comple... 40 8.4 
>emb|AJ606031.1| Triticum aestivum partial mRNA for putative pyridine
           nucleotide-disulphide oxidoreductase
          Length = 723

 Score =  765 bits (386), Expect = 0.0
 Identities = 502/538 (93%), Gaps = 11/538 (2%)
 Strand = Plus / Minus

                                                                       
Query: 81  gcacatcaccaacaattactcgcacagagaacaacgcatgacgatacaacacatatgtgc 140
           |||||||||||||||||||||||||| ||||||   |||     ||||||||||||||||
Sbjct: 714 gcacatcaccaacaattactcgcacacagaaca---catag---tacaacacatatgtgc 661

                                                                       
Query: 141 agccagccagaggtttatttgttttgcctggagatgggccggctcaagcattcaggccca 200
           ||||||||| |||||||||| ||||| ||| ||||    ||||||||||| |||||||||
Sbjct: 660 agccagccataggtttatttcttttgtctgaagat----cggctcaagcactcaggccca 605

                                                                       
Query: 201 tctgcttcctcgtcttgccgacgaacaggtccttggatttgagcatccccggtatgcacc 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tctgcttcctcgtcttgccgacgaacaggtccttggatttgagcatccccggtatgcacc 545

                                                                       
Query: 261 cggtgagcgtcaggtagggcagctgcgccagcccttccttccttcccagggagacgatcg 320
           ||||||||||||||||||| ||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 544 cggtgagcgtcaggtagggtagctgtgccagtccgtccttccttccgagggagacgatcg 485

                                                                       
Query: 321 ccagcgggaacccggtgctgtaggtggcgagcttgctcggaggcgaccccttgatcagta 380
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ccagcgggaagccggtgctgtaggtggcgagcttgctcggaggcgaccccttgatcagta 425

                                                                       
Query: 381 gcttcaggttcttcgctaccagcagcgcgtgcttctgggcgaggtacccttgtttgaant 440
           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 424 gcttcaggttcttggctaccagcagcgcgtgcttctgggcgaggtacccttgtttg-att 366

                                                                       
Query: 441 tcaggaatatctgtgatgtcaccgattgcaaaaatgttatcgtgacccttcactctcaag 500
           ||||||||||| ||||||||||| |||||||||||||||| || |||||||||||| | |
Sbjct: 365 tcaggaatatcggtgatgtcaccaattgcaaaaatgttattgtaacccttcactcttagg 306

                                                                       
Query: 501 tccttctccaccattactcttcccttggtgtccaaagattccttcaggatggtatcatgt 560
           ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 305 tccttttccaccattactcttcctttggtgtccaaagattccttcaggatggtatcatgt 246

                                                                     
Query: 561 agccacgatgaactcagtggcttgccaatacacacaaagtggcaatcagctgttattg 618
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 245 agccacgatgaactcagtggcttaccaatacacacaaagtggcaatcagctgttattg 188
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>gb|BT009021.1| Triticum aestivum clone wdk3c.pk007.j3:fis, full insert mRNA sequence
          Length = 1349

 Score =  745 bits (376), Expect = 0.0
 Identities = 538/590 (91%), Gaps = 13/590 (2%)
 Strand = Plus / Minus

                                                                        
Query: 33   cgtacatgtacattcacacttctgttaaaatgttcatcaccattctcggcacatcaccaa 92
            |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 1279 cgtacatgtacatttacacttttgttaaaatgttcatcaccattcgcagcacatcaccaa 1220

                                                                        
Query: 93   caattactcgcacagagaa----caacgcatgacgatacaacacatatgtgcagccagcc 148
            || ||||||||||| | ||    |||  || ||| ||||||||||||||||||||||   
Sbjct: 1219 catttactcgcacatacaaaacacaagacaagacaatacaacacatatgtgcagccac-- 1162

                                                                        
Query: 149  agaggtttatttgttttgcctggagatgggccggctcaagcattcaggcccatctgcttc 208
              | ||||||||||| || ||||||||    ||||||||||||| |||||||||||||||
Sbjct: 1161 --atgtttatttgttctgtctggagat----cggctcaagcatttaggcccatctgcttc 1108

                                                                        
Query: 209  ctcgtcttgccgacgaacaggtccttggatttgagcatccccggtatgcacccggtgagc 268
            |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1107 ctcgtcttgccgacaaacaggtccttggatttgagcatccctggtatgcacccggtgagc 1048

                                                                        
Query: 269  gtcaggtagggcagctgcgccagcccttccttccttcccagggagacgatcgccagcggg 328
            |||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1047 gtcaggtacggtagctgagccagcccttccttccttccgagggagacgatcgccagcggg 988

                                                                        
Query: 329  aacccggtgctgtaggtggcgagcttgctcggaggcgaccccttgatcagtagcttcagg 388
            || |||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 987  aagccggtgatgtaggtggcgagcttgctcggaggcgcccccttgatcagcagcttcagg 928

                                                                        
Query: 389  ttcttcgctaccagcagcgcgtgcttctgggcgaggtacccttgtttgaanttcaggaat 448
            ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 927  ttcttggctaccagcagcgcgtgcttctgggcgaggtacccttgtttg-atttcaggaat 869

                                                                        
Query: 449  atctgtgatgtcaccgattgcaaaaatgttatcgtgacccttcactctcaagtccttctc 508
            ||| ||||||||||| |||||||||||||||| || |||||||||||||| |||||| ||
Sbjct: 868  atcagtgatgtcaccaattgcaaaaatgttattgtaacccttcactctcaggtccttttc 809

                                                                        
Query: 509  caccattactcttcccttggtgtccaaagattccttcaggatggtatcatgtagccacga 568
            |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808  caccattattcttcctttggtgtccaaagattccttcaggatggtatcatgtagccacga 749

                                                              
Query: 569  tgaactcagtggcttgccaatacacacaaagtggcaatcagctgttattg 618
            ||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 748  tgaactcagtggcttaccgatacacacaaagtggcaatcagctgtaattg 699
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>gb|AY107334.1| Zea mays PCO062090 mRNA sequence
          Length = 1457

 Score =  383 bits (193), Expect = e-103
 Identities = 373/432 (86%), Gaps = 1/432 (0%)
 Strand = Plus / Minus

                                                                        
Query: 184  tcaagcattcaggcccatctgcttcctcgtcttgccgacgaacaggtccttggatttgag 243
            |||| |||||||||||||||||||||||||||||| |||||| || |||  |||||||| 
Sbjct: 1100 tcaaccattcaggcccatctgcttcctcgtcttgctgacgaatagatccccggatttgat 1041

                                                                        
Query: 244  catccccggtatgcacccggtgagcgtcaggtagggcagctgcgccagcccttccttcct 303
            ||| || || | ||||||| ||||||||||  | || | ||| |||||||||||||||||
Sbjct: 1040 catgcctggcaagcacccgctgagcgtcagcaatggaaactgagccagcccttccttcct 981

                                                                        
Query: 304  tcccagggagacgatcgccagcgggaacccggtgctgtaggtggcgagcttgctcggagg 363
            ||| || ||||||| |||||||||  | ||||||||||| || || || |||||   |||
Sbjct: 980  tccaagagagacgagcgccagcggatagccggtgctgtaagtcgccagtttgctgttagg 921

                                                                        
Query: 364  cgaccccttgatcagtagcttcaggttcttcgctaccagcagcgcgtgcttctgggcgag 423
                |||||| |||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 920  gagacccttggtcagtagcttcaggttcttcgccactagcagcgcgtgcttctgggcgag 861

                                                                        
Query: 424  gtacccttgtttgaanttcaggaatatctgtgatgtcaccgattgcaaaaatgttatcgt 483
            ||||||||||||||  |||||||||||||||||||||||| || |||||||||||||   
Sbjct: 860  gtacccttgtttga-tttcaggaatatctgtgatgtcaccaatcgcaaaaatgttattaa 802

                                                                        
Query: 484  gacccttcactctcaagtccttctccaccattactcttcccttggtgtccaaagattcct 543
             ||| |||||||| || ||||| |||||||||||||| |||||| | ||||| |||||||
Sbjct: 801  aacctttcactcttaaatccttttccaccattactctccccttgctatccaaggattcct 742

                                                                        
Query: 544  tcaggatggtatcatgtagccacgatgaactcagtggcttgccaatacacacaaagtggc 603
            | ||||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||
Sbjct: 741  ttaggatggtatcatgtagccacgacgaactcagtggctttccaatgcatacaaagtggc 682

                        
Query: 604  aatcagctgtta 615
            ||||||||||||
Sbjct: 681  aatcagctgtta 670
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>dbj|AK120153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029P18, full
            insert sequence
          Length = 2277

 Score =  216 bits (109), Expect = 7e-53
 Identities = 199/228 (87%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                        
Query: 388  gttcttcgctaccagcagcgcgtgcttctgggcgaggtacccttgtttgaanttcaggaa 447
            |||||| ||||| ||||| || ||||| ||||| ||||| ||||| || || ||||||||
Sbjct: 1896 gttctttgctactagcagagcatgcttatgggcaaggtaaccttgctt-aatttcaggaa 1838

                                                                        
Query: 448  tatctgtgatgtcaccgattgcaaaaatgttatcgtgacccttcactctcaagtccttct 507
            |||||||||||||||| ||||||||||||||||  | ||| || | ||| || ||||| |
Sbjct: 1837 tatctgtgatgtcaccaattgcaaaaatgttattataaccttttattcttaaatcctttt 1778

                                                                        
Query: 508  ccaccattactcttcccttggtgtccaaagattccttcaggatggtatcatgtagccacg 567
            ||||||||| |||||||||| ||||||| |||||||| || ||||||||||||||||| |
Sbjct: 1777 ccaccattagtcttcccttgttgtccaaggattcctttagaatggtatcatgtagccatg 1718

                                                            
Query: 568  atgaactcagtggcttgccaatacacacaaagtggcaatcagctgtta 615
            ||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 1717 atgaactgagtggcttaccgatacacacaaagtggcaatcagctgtta 1670
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  194 bits (98), Expect = 2e-46
 Identities = 155/174 (89%)
 Strand = Plus / Minus

                                                                           
Query: 442     caggaatatctgtgatgtcaccgattgcaaaaatgttatcgtgacccttcactctcaagt 501
               |||||||||||||||||||||| ||||||||||||||||  | ||| || | ||| || |
Sbjct: 2778367 caggaatatctgtgatgtcaccaattgcaaaaatgttattataaccttttattcttaaat 2778308

                                                                           
Query: 502     ccttctccaccattactcttcccttggtgtccaaagattccttcaggatggtatcatgta 561
               |||| |||||||||| |||||||||| ||||||| |||||||| || |||||||||||||
Sbjct: 2778307 ccttttccaccattagtcttcccttgttgtccaaggattcctttagaatggtatcatgta 2778248

                                                                     
Query: 562     gccacgatgaactcagtggcttgccaatacacacaaagtggcaatcagctgtta 615
               |||| |||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 2778247 gccatgatgaactgagtggcttaccgatacacacaaagtggcaatcagctgtta 2778194
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0050G13
          Length = 150685

 Score =  194 bits (98), Expect = 2e-46
 Identities = 155/174 (89%)
 Strand = Plus / Minus

                                                                         
Query: 442   caggaatatctgtgatgtcaccgattgcaaaaatgttatcgtgacccttcactctcaagt 501
             |||||||||||||||||||||| ||||||||||||||||  | ||| || | ||| || |
Sbjct: 46595 caggaatatctgtgatgtcaccaattgcaaaaatgttattataaccttttattcttaaat 46536

                                                                         
Query: 502   ccttctccaccattactcttcccttggtgtccaaagattccttcaggatggtatcatgta 561
             |||| |||||||||| |||||||||| ||||||| |||||||| || |||||||||||||
Sbjct: 46535 ccttttccaccattagtcttcccttgttgtccaaggattcctttagaatggtatcatgta 46476

                                                                   
Query: 562   gccacgatgaactcagtggcttgccaatacacacaaagtggcaatcagctgtta 615
             |||| |||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 46475 gccatgatgaactgagtggcttaccgatacacacaaagtggcaatcagctgtta 46422
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>ref|NM_114287.2| Arabidopsis thaliana disulfide oxidoreductase/ electron carrier/
            oxidoreductase AT3G44190 mRNA, complete cds
          Length = 1517

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 205  cttcctcgtcttgccgacgaacaggtccttggatttga 242
            |||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 1274 cttcctcgtcttcccgacaaacagatccttagatttga 1237
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>gb|AC148001.6| Mus musculus BAC clone RP24-82P9 from chromosome 18, complete sequence
          Length = 181022

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 158    tttgttttgcctggagatgggc 179
              ||||||||||||||||||||||
Sbjct: 129624 tttgttttgcctggagatgggc 129603
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>ref|XM_422763.1| PREDICTED: Gallus gallus similar to SUMO1/sentrin specific protease 5
            (LOC424955), mRNA
          Length = 3015

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 35   tacatgtacattcacacttctg 56
            ||||||||||||||||||||||
Sbjct: 1804 tacatgtacattcacacttctg 1825
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>emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome 3, BAC clone F26G5
          Length = 102873

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 205   cttcctcgtcttgccgacgaacaggtccttggatttga 242
             |||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 83341 cttcctcgtcttcccgacaaacagatccttagatttga 83378
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>gb|BT008451.1| Arabidopsis thaliana At3g44190 gene, complete cds
          Length = 1104

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 205  cttcctcgtcttgccgacgaacaggtccttggatttga 242
            |||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 1068 cttcctcgtcttcccgacaaacagatccttagatttga 1031
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>emb|BX823155.1|CNS0A7AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB93ZH08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1316

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 205  cttcctcgtcttgccgacgaacaggtccttggatttga 242
            |||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 1103 cttcctcgtcttcccgacaaacagatccttagatttga 1066
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>emb|BX823570.1|CNS0A6LH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS51ZG01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1359

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 205  cttcctcgtcttgccgacgaacaggtccttggatttga 242
            |||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 1136 cttcctcgtcttcccgacaaacagatccttagatttga 1099
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>gb|AY084651.1| Arabidopsis thaliana clone 114123 mRNA, complete sequence
          Length = 1505

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 205  cttcctcgtcttgccgacgaacaggtccttggatttga 242
            |||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 1274 cttcctcgtcttcccgacaaacagatccttagatttga 1237
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>gb|BT002026.1| Arabidopsis thaliana putative protein (At3g44190) mRNA, complete cds
          Length = 1423

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 205  cttcctcgtcttgccgacgaacaggtccttggatttga 242
            |||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 1164 cttcctcgtcttcccgacaaacagatccttagatttga 1127
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>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence
          Length = 213163

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 282   gctgcgccagcccttccttccttcc 306
             ||||| |||||||||||||||||||
Sbjct: 93611 gctgccccagcccttccttccttcc 93635
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>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence
          Length = 192541

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 282    gctgcgccagcccttccttccttcc 306
              ||||| |||||||||||||||||||
Sbjct: 161962 gctgccccagcccttccttccttcc 161986
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>gb|AC064856.5| Homo sapiens BAC clone RP11-264N11 from 2, complete sequence
          Length = 107706

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 228  ggtccttggatttgagcatcc 248
            |||||||||||||||||||||
Sbjct: 4867 ggtccttggatttgagcatcc 4847
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>gb|AC160651.2| Pan troglodytes BAC clone CH251-489P13 from chromosome unknown,
             complete sequence
          Length = 209305

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   ggtccttggatttgagcatcc 248
             |||||||||||||||||||||
Sbjct: 12506 ggtccttggatttgagcatcc 12486
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>ref|NM_116172.3| Arabidopsis thaliana unknown protein AT3G63070 mRNA, complete cds
          Length = 4429

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   aaatgttcatcaccattctc 79
            ||||||||||||||||||||
Sbjct: 1525 aaatgttcatcaccattctc 1506
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>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence
          Length = 166451

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tccttccttcccagggagac 315
              ||||||||||||||||||||
Sbjct: 111676 tccttccttcccagggagac 111695
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>gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, complete sequence
          Length = 203772

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tcaggcccatctgcttcctc 211
              ||||||||||||||||||||
Sbjct: 182713 tcaggcccatctgcttcctc 182694
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>ref|XM_715689.1| Candida albicans SC5314 hypothetical protein (CaO19_11825), mRNA
          Length = 3813

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 430  ttgtttgaanttcaggaatatct 452
            ||||||||| |||||||||||||
Sbjct: 2283 ttgtttgaatttcaggaatatct 2261
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>ref|XM_715560.1| Candida albicans SC5314 hypothetical protein (CaO19_4348), mRNA
          Length = 3813

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 430  ttgtttgaanttcaggaatatct 452
            ||||||||| |||||||||||||
Sbjct: 2283 ttgtttgaatttcaggaatatct 2261
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>ref|XM_659299.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6787.2), mRNA
          Length = 1761

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  gtcaggtagggcagctgcgccagc 292
            |||||||||||||||||| |||||
Sbjct: 1175 gtcaggtagggcagctgctccagc 1152
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>gb|AC125531.3| Mus musculus BAC clone RP23-396D12 from chromosome 10, complete sequence
          Length = 219818

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 578    tggcttgccaatacacacaa 597
              ||||||||||||||||||||
Sbjct: 113510 tggcttgccaatacacacaa 113529
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>gb|AC140359.2| Mus musculus BAC clone RP24-240P8 from chromosome 5, complete sequence
          Length = 167021

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    tgcgtacatgtacattcaca 50
             ||||||||||||||||||||
Sbjct: 74880 tgcgtacatgtacattcaca 74899
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>gb|AC122045.3| Mus musculus BAC clone RP24-449H18 from 5, complete sequence
          Length = 142673

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    tgcgtacatgtacattcaca 50
             ||||||||||||||||||||
Sbjct: 96839 tgcgtacatgtacattcaca 96858
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>gb|AC166568.2| Spironucleus vortens clone JGIBAWF-9N8, complete sequence
          Length = 38345

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   cgcgtgcttctgggcgaggt 425
             ||||||||||||||||||||
Sbjct: 35606 cgcgtgcttctgggcgaggt 35587
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>gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome 17, complete sequence
          Length = 200353

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   gccagcccttccttccttcc 306
             ||||||||||||||||||||
Sbjct: 41557 gccagcccttccttccttcc 41576
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>emb|AL139328.8| Human DNA sequence from clone RP11-84N7 on chromosome 13 Contains part
             of the DGKH gene for diacylglycerol kinase eta, complete
             sequence
          Length = 148430

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   agcccttccttccttcccag 309
             ||||||||||||||||||||
Sbjct: 73093 agcccttccttccttcccag 73074
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>emb|AL020995.14|HS117O3 Human DNA sequence from clone RP1-117O3 on chromosome 1p33-34.3 Contains
              the 3' end of a novel gene, the AK2 gene for adenylate
              kinase 2, the gene for ornithine decarboxylase-like (ODC-p)
              and a CpG island, complete sequence
          Length = 150997

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gccagcccttccttccttcc 306
              ||||||||||||||||||||
Sbjct: 145628 gccagcccttccttccttcc 145647
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>gb|AC074336.14| Mus musculus Strain C57BL6/J chromosome 1 BAC, RP23-366C17, Complete
              Sequence, complete sequence
          Length = 217768

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    cttccttccttcccagggag 313
              ||||||||||||||||||||
Sbjct: 149455 cttccttccttcccagggag 149474
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>emb|Z11595.1|EBHCOMPMR Eptatretus burgeri partial mRNA for hagfish complement
          Length = 4902

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 492  actctcaagtccttctccac 511
            ||||||||||||||||||||
Sbjct: 2681 actctcaagtccttctccac 2662
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>emb|AL022018.1|DMC8D8 Drosophila melanogaster cosmid clone 8D8
          Length = 38397

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 279   gcagctgcgccagcccttccttcc 302
             |||||||||||||||| |||||||
Sbjct: 26291 gcagctgcgccagcccatccttcc 26268
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>gb|AC090881.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-465G4, Complete
             Sequence, complete sequence
          Length = 167475

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   gccagcccttccttccttcc 306
             ||||||||||||||||||||
Sbjct: 15373 gccagcccttccttccttcc 15354
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>gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181360

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 279   gcagctgcgccagcccttccttcc 302
             |||||||||||||||| |||||||
Sbjct: 22682 gcagctgcgccagcccatccttcc 22659
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>gb|AY119282.1| Drosophila melanogaster SD27341 full insert cDNA
          Length = 2338

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 279  gcagctgcgccagcccttccttcc 302
            |||||||||||||||| |||||||
Sbjct: 1245 gcagctgcgccagcccatccttcc 1268
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>ref|NM_206602.1| Drosophila melanogaster CG11418-RB, transcript variant B (CG11418),
           mRNA
          Length = 1372

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 279 gcagctgcgccagcccttccttcc 302
           |||||||||||||||| |||||||
Sbjct: 300 gcagctgcgccagcccatccttcc 323
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>ref|NM_130548.2| Drosophila melanogaster CG11418-RA, transcript variant A (CG11418),
            mRNA
          Length = 2317

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 279  gcagctgcgccagcccttccttcc 302
            |||||||||||||||| |||||||
Sbjct: 1245 gcagctgcgccagcccatccttcc 1268
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>gb|AC106822.3| Homo sapiens chromosome 5 clone RP11-772C9, complete sequence
          Length = 115988

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    cccttccttccttcccaggg 311
              ||||||||||||||||||||
Sbjct: 105831 cccttccttccttcccaggg 105812
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>gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 164252

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 279   gcagctgcgccagcccttccttcc 302
             |||||||||||||||| |||||||
Sbjct: 82197 gcagctgcgccagcccatccttcc 82174
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>gb|AC015468.5|AC015468 Homo sapiens chromosome 8, clone RP11-369E15, complete sequence
          Length = 189662

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    ccagcccttccttccttccc 307
              ||||||||||||||||||||
Sbjct: 111608 ccagcccttccttccttccc 111627
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>gb|AC019181.4| Homo sapiens BAC clone RP11-272E3 from 2, complete sequence
          Length = 190998

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   tgatgtcaccgattgcaaaa 473
             ||||||||||||||||||||
Sbjct: 82239 tgatgtcaccgattgcaaaa 82258
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 402    gcagcgcgtgcttctgggcgaggt 425
              ||||||||||||||||| ||||||
Sbjct: 127601 gcagcgcgtgcttctggacgaggt 127624
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>gb|AC007385.3| Homo sapiens BAC clone RP11-325M10 from 2, complete sequence
          Length = 188062

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  gtttatttgttttgcctgga 172
            ||||||||||||||||||||
Sbjct: 5166 gtttatttgttttgcctgga 5147
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>gb|AC006142.1|AC006142 Homo sapiens PAC clone RP4-572A3, complete sequence
          Length = 143623

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   cccttccttccttcccaggg 311
             ||||||||||||||||||||
Sbjct: 58827 cccttccttccttcccaggg 58808
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>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete
              sequence
          Length = 308311

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 279    gcagctgcgccagcccttccttcc 302
              |||||||||||||||| |||||||
Sbjct: 193517 gcagctgcgccagcccatccttcc 193494
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>emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on chromosome 12, complete
             sequence
          Length = 201738

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 506   ctccaccattactcttcccttggt 529
             |||| |||||||||||||||||||
Sbjct: 81483 ctcccccattactcttcccttggt 81460
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>gb|AC134554.6| Mus musculus BAC clone RP24-313F7 from chromosome 15, complete sequence
          Length = 148029

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tcaggcccatctgcttcctc 211
             ||||||||||||||||||||
Sbjct: 93666 tcaggcccatctgcttcctc 93647
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>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 288    ccagcccttccttccttcccaggg 311
              |||||||||| |||||||||||||
Sbjct: 148254 ccagcccttctttccttcccaggg 148231
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>emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20O10
          Length = 83122

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaatgttcatcaccattctc 79
             ||||||||||||||||||||
Sbjct: 48056 aaatgttcatcaccattctc 48037
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>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence
          Length = 228174

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   gccagcccttccttccttcc 306
             ||||||||||||||||||||
Sbjct: 32454 gccagcccttccttccttcc 32473


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,045,851
Number of Sequences: 3902068
Number of extensions: 6045851
Number of successful extensions: 598258
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 597724
Number of HSP's gapped (non-prelim): 524
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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