ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34b15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
2dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
3gb|AY104855.1| Zea mays PCO149530 mRNA sequence 230 4e-57
4gb|BT016800.1| Zea mays clone Contig633 mRNA sequence 218 2e-53
5gb|BT008958.1| Triticum aestivum clone wdk1c.pk012.c23:fis, full... 143 8e-31
6gb|BT016796.1| Zea mays clone Contig629 mRNA sequence 119 1e-23
7gb|M79333.1|MZEBT1A Zea mays brittle-1 protein (bt1) mRNA, compl... 119 1e-23
8gb|AY560327.2| Hordeum vulgare subsp. vulgare plastidial ADP-glu... 115 2e-22
9ref|XM_464528.1| Oryza sativa (japonica cultivar-group), mRNA 84 6e-13
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
11dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
12dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
13dbj|AK107368.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
14gb|AY109498.1| Zea mays CL28_-2 mRNA sequence 74 6e-10
15gb|BT009587.1| Triticum aestivum clone wre1n.pk0049.e1:fis, full... 62 2e-06
16gb|AY106429.1| Zea mays PCO089012 mRNA sequence 60 9e-06
17ref|NM_119392.3| Arabidopsis thaliana binding / transporter AT4G... 46 0.14
18emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, ... 46 0.14
19emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC... 46 0.14
20gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosom... 46 0.14
21gb|AY074831.1| Arabidopsis thaliana AT4g32400/F8B4_100 mRNA, com... 46 0.14
22gb|AF372944.1|AF372944 Arabidopsis thaliana AT4g32400/F8B4_100 m... 46 0.14
23gb|AY084938.1| Arabidopsis thaliana clone 12232 mRNA, complete s... 46 0.14
24gb|AC103936.9| Mus musculus chromosome 9, clone RP24-361K14, com... 46 0.14
25gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
26gb|AC183321.1| Ornithorhynchus anatinus BAC clone OABb-153H21 fr... 42 2.1
27gb|AC183528.2| Pan troglodytes BAC clone CH251-737P22 from chrom... 42 2.1
28ref|XM_001000326.1| PREDICTED: Mus musculus similar to 40S ribos... 42 2.1
29ref|XM_001000344.1| PREDICTED: Mus musculus similar to 40S ribos... 42 2.1
30ref|XM_001000364.1| PREDICTED: Mus musculus similar to 40S ribos... 42 2.1
31ref|XM_486222.4| PREDICTED: Mus musculus similar to 40S ribosoma... 42 2.1
32ref|XM_917161.2| PREDICTED: Mus musculus similar to 40S ribosoma... 42 2.1
33emb|AL158032.32| Human DNA sequence from clone RP11-101P17 on ch... 42 2.1
34gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome... 42 2.1
35ref|NR_000033.2| Homo sapiens estrogen-related receptor alpha ps... 42 2.1
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
37dbj|AK103471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
38gb|U85258.1|HSU85258 Human estrogen related receptor alpha (ESTR... 42 2.1
39gb|AC138382.10| Mus musculus chromosome 1, clone RP24-400E14, co... 40 8.5
40gb|AC102350.14| Mus musculus chromosome 9, clone RP23-323P3, com... 40 8.5
41gb|AC121778.1| Mus musculus BAC clone RP23-359J6 from 1, complet... 40 8.5
42gb|AC100491.9| Mus musculus chromosome 9, clone RP23-142M14, com... 40 8.5
43gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete s... 40 8.5
44gb|AC140546.12| Medicago truncatula clone mth2-35l19, complete s... 40 8.5
45emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chro... 40 8.5
46emb|AL353594.13| Human DNA sequence from clone RP11-83O16 on chr... 40 8.5
47emb|AL132671.20|HSDJ92C8 Human DNA sequence from clone RP1-92C8 ... 40 8.5
48emb|CR391928.7| Zebrafish DNA sequence from clone DKEYP-21F4 in ... 40 8.5
49gb|AC087350.3| Homo sapiens chromosome 8, clone RP11-367C15, com... 40 8.5
50gb|AC108128.2| Homo sapiens chromosome 5 clone RP11-755E13, comp... 40 8.5
51gb|AC093790.3| Homo sapiens BAC clone RP11-250F14 from 4, comple... 40 8.5
52gb|AC026445.5| Homo sapiens chromosome 5 clone CTD-2306M10, comp... 40 8.5
53dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
54gb|AC073879.7| Homo sapiens BAC clone RP11-752K22 from 2, comple... 40 8.5
55gb|AC156280.5| Mus musculus 6 BAC RP24-314B4 (Roswell Park Cance... 40 8.5
56gb|AC009951.10| Homo sapiens BAC clone RP11-107E5 from 2, comple... 40 8.5
57gb|AC007238.3| Homo sapiens BAC clone RP11-19M18 from 2, complet... 40 8.5
58gb|AC108929.4| Homo sapiens BAC clone RP11-73N8 from 2, complete... 40 8.5
59dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
60emb|AL122020.5|CNS01DSV Human chromosome 14 DNA sequence BAC C-3... 40 8.5 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  230 bits (116), Expect = 4e-57
 Identities = 212/244 (86%)
 Strand = Plus / Plus

                                                                            
Query: 376      cttcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggca 435
                |||| ||||| ||||||||||| || |||||||||||||| ||||| || ||||| ||||
Sbjct: 23440293 cttcaaccagtatcttcttgcaagcttcatagcacatgaatgagattccagccgcaggca 23440352

                                                                            
Query: 436      tgagcttgatgcagctgggcccgagccccttgtacagaccgctgatcccttccttctcca 495
                | |||||||||||||| ||||| ||||||||||| || ||||  |||||||| |||||||
Sbjct: 23440353 tcagcttgatgcagctcggcccaagccccttgtaaaggccgccaatcccttcattctcca 23440412

                                                                            
Query: 496      tgatgcagtagagggcatggaacacgttcttgtagacctgccttccgcccaccgcccctg 555
                | ||||| || || |||||||| || ||||||||||||||||| ||||| ||||| ||  
Sbjct: 23440413 ttatgcaatacagagcatggaagacattcttgtagacctgcctgccgcctaccgctccga 23440472

                                                                            
Query: 556      cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcctg 615
                ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| || |
Sbjct: 23440473 cctgcatttgcttgcgagctacctcgagagggaaggtggcggtgctcgagatggcacccg 23440532

                    
Query: 616      cggc 619
                ||||
Sbjct: 23440533 cggc 23440536
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>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0486H12
          Length = 179085

 Score =  230 bits (116), Expect = 4e-57
 Identities = 212/244 (86%)
 Strand = Plus / Plus

                                                                          
Query: 376    cttcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggca 435
              |||| ||||| ||||||||||| || |||||||||||||| ||||| || ||||| ||||
Sbjct: 99848  cttcaaccagtatcttcttgcaagcttcatagcacatgaatgagattccagccgcaggca 99907

                                                                          
Query: 436    tgagcttgatgcagctgggcccgagccccttgtacagaccgctgatcccttccttctcca 495
              | |||||||||||||| ||||| ||||||||||| || ||||  |||||||| |||||||
Sbjct: 99908  tcagcttgatgcagctcggcccaagccccttgtaaaggccgccaatcccttcattctcca 99967

                                                                          
Query: 496    tgatgcagtagagggcatggaacacgttcttgtagacctgccttccgcccaccgcccctg 555
              | ||||| || || |||||||| || ||||||||||||||||| ||||| ||||| ||  
Sbjct: 99968  ttatgcaatacagagcatggaagacattcttgtagacctgcctgccgcctaccgctccga 100027

                                                                          
Query: 556    cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcctg 615
              ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| || |
Sbjct: 100028 cctgcatttgcttgcgagctacctcgagagggaaggtggcggtgctcgagatggcacccg 100087

                  
Query: 616    cggc 619
              ||||
Sbjct: 100088 cggc 100091
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>gb|AY104855.1| Zea mays PCO149530 mRNA sequence
          Length = 1621

 Score =  230 bits (116), Expect = 4e-57
 Identities = 212/244 (86%)
 Strand = Plus / Minus

                                                                        
Query: 376  cttcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggca 435
            ||||||||||||||||||| |||||||| ||||||||||| ||||| || || || ||||
Sbjct: 1500 cttcgaccaggatcttcttacaggcctcgtagcacatgaacgagatgcctgctgcaggca 1441

                                                                        
Query: 436  tgagcttgatgcagctgggcccgagccccttgtacagaccgctgatcccttccttctcca 495
            | | |||||||||||| || ||||||||||||||||| ||||  | ||||||||||||||
Sbjct: 1440 tcaacttgatgcagctcggtccgagccccttgtacaggccgccaaccccttccttctcca 1381

                                                                        
Query: 496  tgatgcagtagagggcatggaacacgttcttgtagacctgccttccgcccaccgcccctg 555
            | ||||||||||| ||||||||||| ||||||||||||||||| || || || || ||| 
Sbjct: 1380 ttatgcagtagagcgcatggaacacattcttgtagacctgcctccctcctactgctccta 1321

                                                                        
Query: 556  cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcctg 615
            ||||||| |||||||| || || ||||||||||| ||||||||||| |||||||| || |
Sbjct: 1320 cctgcatttgcttgcgggccacctcgagagggaatgtggcagtgctggagatggcaccag 1261

                
Query: 616  cggc 619
            ||||
Sbjct: 1260 cggc 1257
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>gb|BT016800.1| Zea mays clone Contig633 mRNA sequence
          Length = 1821

 Score =  218 bits (110), Expect = 2e-53
 Identities = 206/238 (86%)
 Strand = Plus / Minus

                                                                        
Query: 376  cttcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggca 435
            ||||||||||||||||||| |||||||| ||||||||||| ||||| || || || ||||
Sbjct: 1454 cttcgaccaggatcttcttacaggcctcgtagcacatgaacgagatgcctgctgcaggca 1395

                                                                        
Query: 436  tgagcttgatgcagctgggcccgagccccttgtacagaccgctgatcccttccttctcca 495
            | | |||||||||||| || ||||||||||||||||| ||||  | ||||||||||||||
Sbjct: 1394 tcaacttgatgcagctcggtccgagccccttgtacaggccgccaaccccttccttctcca 1335

                                                                        
Query: 496  tgatgcagtagagggcatggaacacgttcttgtagacctgccttccgcccaccgcccctg 555
            | ||||||||||| ||||||||||| ||||||||||||||||| || || || || ||| 
Sbjct: 1334 ttatgcagtagagcgcatggaacacattcttgtagacctgcctccctcctactgctccta 1275

                                                                      
Query: 556  cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcc 613
            ||||||| |||||||| || || || |||||||| || |||||||| |||||||||||
Sbjct: 1274 cctgcatttgcttgcgggccacctcaagagggaatgttgcagtgctagagatggcgcc 1217
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>gb|BT008958.1| Triticum aestivum clone wdk1c.pk012.c23:fis, full insert mRNA
            sequence
          Length = 1625

 Score =  143 bits (72), Expect = 8e-31
 Identities = 186/224 (83%)
 Strand = Plus / Minus

                                                                        
Query: 378  tcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggcatg 437
            ||||| || ||||||||||||||||| ||||||||||||||||| || || |||||||||
Sbjct: 1271 tcgacaagtatcttcttgcaggcctcgtagcacatgaaggagatgccggcggcgggcatg 1212

                                                                        
Query: 438  agcttgatgcagctgggcccgagccccttgtacagaccgctgatcccttccttctccatg 497
            ||||||||||||||||| ||||||||   ||| || |||  | | || |||||||| | |
Sbjct: 1211 agcttgatgcagctggggccgagcccgcggtagagcccggcggtgccctccttctcgagg 1152

                                                                        
Query: 498  atgcagtagagggcatggaacacgttcttgtagacctgccttccgcccaccgcccctgcc 557
            |||||||| | ||| || | |||||||||||| |||||||| |||||||| || ||  ||
Sbjct: 1151 atgcagtacatggcgtgcagcacgttcttgtacacctgcctcccgcccacggcgcccacc 1092

                                                        
Query: 558  tgcatctgcttgcgagctacttcgagagggaaggtggcagtgct 601
            ||||||||||| || || || || || ||||| ||||| |||||
Sbjct: 1091 tgcatctgcttccgcgccacctccagcgggaacgtggccgtgct 1048
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>gb|BT016796.1| Zea mays clone Contig629 mRNA sequence
          Length = 1800

 Score =  119 bits (60), Expect = 1e-23
 Identities = 192/236 (81%)
 Strand = Plus / Minus

                                                                        
Query: 378  tcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggcatg 437
            ||||| |||||||||||||| ||||| ||||||||||||| ||| || || |||||||||
Sbjct: 1371 tcgacgaggatcttcttgcacgcctcgtagcacatgaaggcgatgccggcggcgggcatg 1312

                                                                        
Query: 438  agcttgatgcagctgggcccgagccccttgtacagaccgctgatcccttccttctccatg 497
            |||||||||||||| || ||||| ||   |||||| |||| |   || |||||||  | |
Sbjct: 1311 agcttgatgcagctagggccgagacctcggtacaggccgccggcgccctccttcttgagg 1252

                                                                        
Query: 498  atgcagtagagggcatggaacacgttcttgtagacctgccttccgcccaccgcccctgcc 557
            ||||||||||  || ||||  ||||||| ||| |||||||| |||||||| || ||  ||
Sbjct: 1251 atgcagtagatagcgtggaggacgttctggtacacctgcctcccgcccacagcgcccacc 1192

                                                                    
Query: 558  tgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcc 613
            |||||||||||||| || || || || ||||| ||||| | ||| | |||||||||
Sbjct: 1191 tgcatctgcttgcgggccacctctagcgggaacgtggccgagctggcgatggcgcc 1136
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>gb|M79333.1|MZEBT1A Zea mays brittle-1 protein (bt1) mRNA, complete cds
          Length = 1733

 Score =  119 bits (60), Expect = 1e-23
 Identities = 192/236 (81%)
 Strand = Plus / Minus

                                                                        
Query: 378  tcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggcatg 437
            ||||| |||||||||||||| ||||| ||||||||||||| ||| || || |||||||||
Sbjct: 1330 tcgacgaggatcttcttgcacgcctcgtagcacatgaaggcgatgccggcggcgggcatg 1271

                                                                        
Query: 438  agcttgatgcagctgggcccgagccccttgtacagaccgctgatcccttccttctccatg 497
            |||||||||||||| || ||||| ||   |||||| |||| |   || |||||||  | |
Sbjct: 1270 agcttgatgcagctagggccgagacctcggtacaggccgccggcgccctccttcttgagg 1211

                                                                        
Query: 498  atgcagtagagggcatggaacacgttcttgtagacctgccttccgcccaccgcccctgcc 557
            ||||||||||  || ||||  ||||||| ||| |||||||| |||||||| || ||  ||
Sbjct: 1210 atgcagtagatagcgtggaggacgttctggtacacctgcctcccgcccacagcgcccacc 1151

                                                                    
Query: 558  tgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcc 613
            |||||||||||||| || || || || ||||| ||||| | ||| | |||||||||
Sbjct: 1150 tgcatctgcttgcgggccacctctagcgggaacgtggccgagctggcgatggcgcc 1095
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>gb|AY560327.2| Hordeum vulgare subsp. vulgare plastidial ADP-glucose transporter
            mRNA, complete cds; nuclear gene for plastid product
          Length = 1278

 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                        
Query: 378  tcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggcatg 437
            ||||| || ||||||||||||||||| ||||||||||||||||| || || |||||||||
Sbjct: 1172 tcgacgagtatcttcttgcaggcctcgtagcacatgaaggagatgccggcggcgggcatg 1113

                                      
Query: 438  agcttgatgcagctgggcccgagccc 463
            ||||||||||||||||| ||||||||
Sbjct: 1112 agcttgatgcagctggggccgagccc 1087



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 519  acgttcttgtagacctgccttccgcccaccgcccctgcctgcatctgcttgcgagctact 578
            ||||||||||| |||||||| |||||||| || ||  ||||||||||||| || || || 
Sbjct: 1031 acgttcttgtacacctgcctcccgcccacggcgcccacctgcatctgcttccgcgccacc 972

                                               
Query: 579  tcgagagggaaggtggcagtgctcgagatggcgcc 613
            || || ||||||||||| ||||| | |||||||||
Sbjct: 971  tccagcgggaaggtggccgtgctggcgatggcgcc 937
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>ref|XM_464528.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1663

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                        
Query: 399  gcctcatagcacatgaaggagatccccgccgcgggcatgagcttgatgcagctgggcccg 458
            ||||| ||||||||||||||||| || || |||||||||||||||||||||||||| |||
Sbjct: 1290 gcctcgtagcacatgaaggagatgccggcggcgggcatgagcttgatgcagctggggccg 1231

              
Query: 459  ag 460
            ||
Sbjct: 1230 ag 1229



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 556  cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcc 613
            |||||||||||||||| || || ||||| ||||||||||| ||||| | |||||||||
Sbjct: 1133 cctgcatctgcttgcgggcgacctcgagcgggaaggtggccgtgctggcgatggcgcc 1076
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                           
Query: 399     gcctcatagcacatgaaggagatccccgccgcgggcatgagcttgatgcagctgggcccg 458
               ||||| ||||||||||||||||| || || |||||||||||||||||||||||||| |||
Sbjct: 5738419 gcctcgtagcacatgaaggagatgccggcggcgggcatgagcttgatgcagctggggccg 5738360

                 
Query: 459     ag 460
               ||
Sbjct: 5738359 ag 5738358



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                         
Query: 556     cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcc 613
               |||||||||||||||| || || ||||| ||||||||||| ||||| | |||||||||
Sbjct: 5738262 cctgcatctgcttgcgggcgacctcgagcgggaaggtggccgtgctggcgatggcgcc 5738205
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>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0419A09
          Length = 168064

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                          
Query: 399    gcctcatagcacatgaaggagatccccgccgcgggcatgagcttgatgcagctgggcccg 458
              ||||| ||||||||||||||||| || || |||||||||||||||||||||||||| |||
Sbjct: 166155 gcctcgtagcacatgaaggagatgccggcggcgggcatgagcttgatgcagctggggccg 166096

                
Query: 459    ag 460
              ||
Sbjct: 166095 ag 166094



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                        
Query: 556    cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcc 613
              |||||||||||||||| || || ||||| ||||||||||| ||||| | |||||||||
Sbjct: 165998 cctgcatctgcttgcgggcgacctcgagcgggaaggtggccgtgctggcgatggcgcc 165941
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>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                         
Query: 399   gcctcatagcacatgaaggagatccccgccgcgggcatgagcttgatgcagctgggcccg 458
             ||||| ||||||||||||||||| || || |||||||||||||||||||||||||| |||
Sbjct: 27933 gcctcgtagcacatgaaggagatgccggcggcgggcatgagcttgatgcagctggggccg 27874

               
Query: 459   ag 460
             ||
Sbjct: 27873 ag 27872



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 556   cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcc 613
             |||||||||||||||| || || ||||| ||||||||||| ||||| | |||||||||
Sbjct: 27776 cctgcatctgcttgcgggcgacctcgagcgggaaggtggccgtgctggcgatggcgcc 27719
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>dbj|AK107368.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B01, full
            insert sequence
          Length = 1662

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                        
Query: 399  gcctcatagcacatgaaggagatccccgccgcgggcatgagcttgatgcagctgggcccg 458
            ||||| ||||||||||||||||| || || |||||||||||||||||||||||||| |||
Sbjct: 1289 gcctcgtagcacatgaaggagatgccggcggcgggcatgagcttgatgcagctggggccg 1230

              
Query: 459  ag 460
            ||
Sbjct: 1229 ag 1228



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 556  cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcc 613
            |||||||||||||||| || || ||||| ||||||||||| ||||| | |||||||||
Sbjct: 1132 cctgcatctgcttgcgggcgacctcgagcgggaaggtggccgtgctggcgatggcgcc 1075
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>gb|AY109498.1| Zea mays CL28_-2 mRNA sequence
          Length = 2150

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 148/185 (80%)
 Strand = Plus / Minus

                                                                        
Query: 429  gcgggcatgagcttgatgcagctgggcccgagccccttgtacagaccgctgatcccttcc 488
            ||||||||||||||||||||||| || ||||| ||   |||||| |||| |   || |||
Sbjct: 1866 gcgggcatgagcttgatgcagctagggccgagacctcggtacaggccgccggcgccctcc 1807

                                                                        
Query: 489  ttctccatgatgcagtagagggcatggaacacgttcttgtagacctgccttccgcccacc 548
            ||||  | |||||||||||  || ||||  ||||||| ||| |||||||| |||||||| 
Sbjct: 1806 ttcttgaggatgcagtagatagcgtggaggacgttctggtacacctgcctcccgcccaca 1747

                                                                        
Query: 549  gcccctgcctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatg 608
            || ||  |||||||||||||||| || || || || ||||| ||||| | ||| | ||||
Sbjct: 1746 gcgcccacctgcatctgcttgcgggccacctctagcgggaacgtggccgagctggcgatg 1687

                 
Query: 609  gcgcc 613
            |||||
Sbjct: 1686 gcgcc 1682
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>gb|BT009587.1| Triticum aestivum clone wre1n.pk0049.e1:fis, full insert mRNA
           sequence
          Length = 1267

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 558 tgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcgagatggcgcctgc 616
           ||||| ||||||||||| || |||||||| || ||||||||||| |||||||| |||||
Sbjct: 675 tgcatgtgcttgcgagcaacctcgagaggaaatgtggcagtgcttgagatggctcctgc 617
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>gb|AY106429.1| Zea mays PCO089012 mRNA sequence
          Length = 939

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                       
Query: 376 cttcgaccaggatcttcttgcaggcctcatagcacatgaaggagatccccgccgcgggca 435
           |||||| ||| ||||||||||| ||||| |||||||| ||||| ||||| || || ||||
Sbjct: 496 cttcgatcagaatcttcttgcaagcctcgtagcacataaaggaaatcccagcagcaggca 437

                                 
Query: 436 tgagcttgatgcagctgggccc 457
           | | ||| |||||||| |||||
Sbjct: 436 tcaacttcatgcagcttggccc 415
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>ref|NM_119392.3| Arabidopsis thaliana binding / transporter AT4G32400 mRNA, complete
            cds
          Length = 1467

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 387  atcttcttgcaggcctcatagcacatgaaggagat 421
            ||||||||||| || ||||| ||||||||||||||
Sbjct: 1212 atcttcttgcaagcttcataacacatgaaggagat 1178



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 556  cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcga 604
            ||||||| ||||| || || ||||| |||||||| || |||||||||||
Sbjct: 1043 cctgcatatgcttccgggccacttcaagagggaaagttgcagtgctcga 995
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>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
          Length = 197252

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 387   atcttcttgcaggcctcatagcacatgaaggagat 421
             ||||||||||| || ||||| ||||||||||||||
Sbjct: 54219 atcttcttgcaagcttcataacacatgaaggagat 54185



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 556   cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcga 604
             ||||||| ||||| || || ||||| |||||||| || |||||||||||
Sbjct: 54050 cctgcatatgcttccgggccacttcaagagggaaagttgcagtgctcga 54002
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>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project)
          Length = 93257

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 387   atcttcttgcaggcctcatagcacatgaaggagat 421
             ||||||||||| || ||||| ||||||||||||||
Sbjct: 40502 atcttcttgcaagcttcataacacatgaaggagat 40468



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 556   cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcga 604
             ||||||| ||||| || || ||||| |||||||| || |||||||||||
Sbjct: 40333 cctgcatatgcttccgggccacttcaagagggaaagttgcagtgctcga 40285
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>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence
          Length = 205094

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 289    cttcttttcttgatagaaagaaa 311
              |||||||||||||||||||||||
Sbjct: 192529 cttcttttcttgatagaaagaaa 192507
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>gb|AY074831.1| Arabidopsis thaliana AT4g32400/F8B4_100 mRNA, complete cds
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 387  atcttcttgcaggcctcatagcacatgaaggagat 421
            ||||||||||| || ||||| ||||||||||||||
Sbjct: 1151 atcttcttgcaagcttcataacacatgaaggagat 1117



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 556 cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcga 604
           ||||||| ||||| || || ||||| |||||||| || |||||||||||
Sbjct: 982 cctgcatatgcttccgggccacttcaagagggaaagttgcagtgctcga 934
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>gb|AF372944.1|AF372944 Arabidopsis thaliana AT4g32400/F8B4_100 mRNA, complete cds
          Length = 1439

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 387  atcttcttgcaggcctcatagcacatgaaggagat 421
            ||||||||||| || ||||| ||||||||||||||
Sbjct: 1194 atcttcttgcaagcttcataacacatgaaggagat 1160



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 556  cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcga 604
            ||||||| ||||| || || ||||| |||||||| || |||||||||||
Sbjct: 1025 cctgcatatgcttccgggccacttcaagagggaaagttgcagtgctcga 977
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>gb|AY084938.1| Arabidopsis thaliana clone 12232 mRNA, complete sequence
          Length = 1334

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 387  atcttcttgcaggcctcatagcacatgaaggagat 421
            ||||||||||| || ||||| ||||||||||||||
Sbjct: 1209 atcttcttgcaagcttcataacacatgaaggagat 1175



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 556  cctgcatctgcttgcgagctacttcgagagggaaggtggcagtgctcga 604
            ||||||| ||||| || || ||||| |||||||| || |||||||||||
Sbjct: 1040 cctgcatatgcttccgggccacttcaagagggaaagttgcagtgctcga 992
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>gb|AC103936.9| Mus musculus chromosome 9, clone RP24-361K14, complete sequence
          Length = 184968

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 289    cttcttttcttgatagaaagaaa 311
              |||||||||||||||||||||||
Sbjct: 105960 cttcttttcttgatagaaagaaa 105982
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                         
Query: 521   gttcttgtagacctgccttccgcccaccgcccctgcctgcatctgcttgcgagctacttc 580
             |||||||||||||| ||| || || || || ||  | ||||| |||||||| || || ||
Sbjct: 97037 gttcttgtagaccttcctgccaccgactgcgccaacttgcatgtgcttgcgtgcaacctc 96978

                                                      
Query: 581   gagagggaaggtggcagtgctcgagatggcgcctgcggccg 621
             ||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 96977 gagggggaaagtagctgtgcttgagatagctcctgcggccg 96937



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 389   cttcttgcaggcctcatagcacat 412
             ||||||||| ||||||||||||||
Sbjct: 97169 cttcttgcaagcctcatagcacat 97146
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>gb|AC183321.1| Ornithorhynchus anatinus BAC clone OABb-153H21 from chromosome unknown,
             complete sequence
          Length = 161060

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   acagacatctcaaatgggaaa 248
             |||||||||||||||||||||
Sbjct: 26449 acagacatctcaaatgggaaa 26429
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>gb|AC183528.2| Pan troglodytes BAC clone CH251-737P22 from chromosome 13, complete
              sequence
          Length = 202694

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 318    gcttaatcctgccgcctcttc 338
              |||||||||||||||||||||
Sbjct: 182215 gcttaatcctgccgcctcttc 182195
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>ref|XM_001000326.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S6,
           transcript variant 1 (LOC672192), mRNA
          Length = 1052

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 aggccaaaacttcatcatcta 227
           |||||||||||||||||||||
Sbjct: 807 aggccaaaacttcatcatcta 787
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>ref|XM_001000344.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S6,
           transcript variant 2 (LOC672192), mRNA
          Length = 1045

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 aggccaaaacttcatcatcta 227
           |||||||||||||||||||||
Sbjct: 800 aggccaaaacttcatcatcta 780
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>ref|XM_001000364.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S6,
           transcript variant 3 (LOC672192), mRNA
          Length = 1176

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 aggccaaaacttcatcatcta 227
           |||||||||||||||||||||
Sbjct: 931 aggccaaaacttcatcatcta 911
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>ref|XM_486222.4| PREDICTED: Mus musculus similar to 40S ribosomal protein S6
           (LOC434404), mRNA
          Length = 1176

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 aggccaaaacttcatcatcta 227
           |||||||||||||||||||||
Sbjct: 931 aggccaaaacttcatcatcta 911
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>ref|XM_917161.2| PREDICTED: Mus musculus similar to 40S ribosomal protein S6
           (LOC434404), mRNA
          Length = 1176

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 aggccaaaacttcatcatcta 227
           |||||||||||||||||||||
Sbjct: 931 aggccaaaacttcatcatcta 911
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>emb|AL158032.32| Human DNA sequence from clone RP11-101P17 on chromosome 13 Contains the
              SAP18 gene for sin3-associated polypeptide, 18kD (SAP18p),
              six novel genes, the 3'end of a novel gene, an
              estrogen-related receptor alpha (ESRRA) pseudogene, a
              pseudogene similar to part of mitochondrial intermediate
              peptidase (MIPEP) and five CpG islands, complete sequence
          Length = 172004

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 318    gcttaatcctgccgcctcttc 338
              |||||||||||||||||||||
Sbjct: 124818 gcttaatcctgccgcctcttc 124838
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>gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome 9, complete sequence
          Length = 163817

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    aggccaaaacttcatcatcta 227
              |||||||||||||||||||||
Sbjct: 132577 aggccaaaacttcatcatcta 132597
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>ref|NR_000033.2| Homo sapiens estrogen-related receptor alpha pseudogene (ESTRRA) on
            chromosome 13
          Length = 2874

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 318  gcttaatcctgccgcctcttc 338
            |||||||||||||||||||||
Sbjct: 2180 gcttaatcctgccgcctcttc 2200
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                           
Query: 521     gttcttgtagacctgccttccgcccaccgcccctgcctgcatctgcttgcgagctacttc 580
               |||||||||||||| ||| || || || || ||  | ||||| |||||||| || || ||
Sbjct: 4210558 gttcttgtagaccttcctgccaccgactgcgccaacttgcatgtgcttgcgtgcaacctc 4210499

                                                        
Query: 581     gagagggaaggtggcagtgctcgagatggcgcctgcggccg 621
               ||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 4210498 gagggggaaagtagctgtgcttgagatagctcctgcggccg 4210458



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 389     cttcttgcaggcctcatagcacat 412
               ||||||||| ||||||||||||||
Sbjct: 4210690 cttcttgcaagcctcatagcacat 4210667
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>dbj|AK103471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130A21, full
            insert sequence
          Length = 1968

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                        
Query: 521  gttcttgtagacctgccttccgcccaccgcccctgcctgcatctgcttgcgagctacttc 580
            |||||||||||||| ||| || || || || ||  | ||||| |||||||| || || ||
Sbjct: 1456 gttcttgtagaccttcctgccaccgactgcgccaacttgcatgtgcttgcgtgcaacctc 1397

                                                     
Query: 581  gagagggaaggtggcagtgctcgagatggcgcctgcggccg 621
            ||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 1396 gagggggaaagtagctgtgcttgagatagctcctgcggccg 1356



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 389  cttcttgcaggcctcatagcacat 412
            ||||||||| ||||||||||||||
Sbjct: 1588 cttcttgcaagcctcatagcacat 1565
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>gb|U85258.1|HSU85258 Human estrogen related receptor alpha (ESTRRA) pseudogene
          Length = 2874

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 318  gcttaatcctgccgcctcttc 338
            |||||||||||||||||||||
Sbjct: 2180 gcttaatcctgccgcctcttc 2200
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>gb|AC138382.10| Mus musculus chromosome 1, clone RP24-400E14, complete sequence
          Length = 136819

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 193   acagaactaattagaggccaaaac 216
             ||||||||||||| ||||||||||
Sbjct: 54357 acagaactaattataggccaaaac 54334
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>gb|AC102350.14| Mus musculus chromosome 9, clone RP23-323P3, complete sequence
          Length = 211216

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    ctcaaatgggaaatctttga 255
              ||||||||||||||||||||
Sbjct: 208255 ctcaaatgggaaatctttga 208236
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>gb|AC121778.1| Mus musculus BAC clone RP23-359J6 from 1, complete sequence
          Length = 205069

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   aaacttcatcatctaacaga 232
             ||||||||||||||||||||
Sbjct: 76447 aaacttcatcatctaacaga 76428
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>gb|AC100491.9| Mus musculus chromosome 9, clone RP23-142M14, complete sequence
          Length = 222845

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    ctcaaatgggaaatctttga 255
              ||||||||||||||||||||
Sbjct: 112891 ctcaaatgggaaatctttga 112910
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>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence
          Length = 129102

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   tcttttcttgatagaaagaa 310
             ||||||||||||||||||||
Sbjct: 19983 tcttttcttgatagaaagaa 20002
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>gb|AC140546.12| Medicago truncatula clone mth2-35l19, complete sequence
          Length = 106962

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    tcttttcttgatagaaagaa 310
              ||||||||||||||||||||
Sbjct: 103940 tcttttcttgatagaaagaa 103959
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>emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chromosome 1 Contains a novel
              gene, complete sequence
          Length = 197322

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    atcttcttttcttgatagaa 306
              ||||||||||||||||||||
Sbjct: 183055 atcttcttttcttgatagaa 183074
to top
>emb|AL353594.13| Human DNA sequence from clone RP11-83O16 on chromosome 9 Contains the
             gene for phosphoserine aminotransferase (PSA) and a CpG
             island, complete sequence
          Length = 95091

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   catctaacagacatctcaaa 241
             ||||||||||||||||||||
Sbjct: 86418 catctaacagacatctcaaa 86399
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>emb|AL132671.20|HSDJ92C8 Human DNA sequence from clone RP1-92C8 on chromosome 6 Contains a novel
             gene, a RAP1A pseudogene, the 5' end of the ROS1 gene for
             v-ros UR2 sarcoma virus oncogene homolog 1 (avian), the 5'
             end of the DCBLD1 gene for discoidin CUB and LCCL domain
             containing 1 and two CpG islands, complete sequence
          Length = 131060

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   atctaacagacatctcaaat 242
             ||||||||||||||||||||
Sbjct: 86696 atctaacagacatctcaaat 86677
to top
>emb|CR391928.7| Zebrafish DNA sequence from clone DKEYP-21F4 in linkage group 5,
             complete sequence
          Length = 72746

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 485   ttccttctccatgatgcagt 504
             ||||||||||||||||||||
Sbjct: 23951 ttccttctccatgatgcagt 23970
to top
>gb|AC087350.3| Homo sapiens chromosome 8, clone RP11-367C15, complete sequence
          Length = 193364

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    atctaacagacatctcaaat 242
              ||||||||||||||||||||
Sbjct: 127822 atctaacagacatctcaaat 127841
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>gb|AC108128.2| Homo sapiens chromosome 5 clone RP11-755E13, complete sequence
          Length = 119387

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     aacagtgacaagaaatccag 21
             ||||||||||||||||||||
Sbjct: 80886 aacagtgacaagaaatccag 80905
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>gb|AC093790.3| Homo sapiens BAC clone RP11-250F14 from 4, complete sequence
          Length = 152359

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   catctaacagacatctcaaa 241
             ||||||||||||||||||||
Sbjct: 37504 catctaacagacatctcaaa 37523
to top
>gb|AC026445.5| Homo sapiens chromosome 5 clone CTD-2306M10, complete sequence
          Length = 113087

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   acagaagcaaaagtagcatgacaa 144
             ||||||||||||| ||||||||||
Sbjct: 61939 acagaagcaaaagcagcatgacaa 61962
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     caaatgggaaatctttgacc 257
               ||||||||||||||||||||
Sbjct: 4777283 caaatgggaaatctttgacc 4777302
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>gb|AC073879.7| Homo sapiens BAC clone RP11-752K22 from 2, complete sequence
          Length = 188181

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    tctaacagacatctcaaatg 243
              ||||||||||||||||||||
Sbjct: 126580 tctaacagacatctcaaatg 126599
to top
>gb|AC156280.5| Mus musculus 6 BAC RP24-314B4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 194695

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    tcatccaatcttcttttctt 299
              ||||||||||||||||||||
Sbjct: 136216 tcatccaatcttcttttctt 136235
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>gb|AC009951.10| Homo sapiens BAC clone RP11-107E5 from 2, complete sequence
          Length = 159791

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    gcatgcttcagtctactcct 372
              ||||||||||||||||||||
Sbjct: 134290 gcatgcttcagtctactcct 134309
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>gb|AC007238.3| Homo sapiens BAC clone RP11-19M18 from 2, complete sequence
          Length = 169147

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   tcatcatctaacagacatctcaaa 241
             ||||||||||| ||||||||||||
Sbjct: 51572 tcatcatctaatagacatctcaaa 51549
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>gb|AC108929.4| Homo sapiens BAC clone RP11-73N8 from 2, complete sequence
          Length = 112211

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   tctaacagacatctcaaatg 243
             ||||||||||||||||||||
Sbjct: 35367 tctaacagacatctcaaatg 35386
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>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0455A11
          Length = 158629

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    caaatgggaaatctttgacc 257
              ||||||||||||||||||||
Sbjct: 135299 caaatgggaaatctttgacc 135318
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>emb|AL122020.5|CNS01DSV Human chromosome 14 DNA sequence BAC C-3035D6 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 149904

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    tctaacagacatctcaaatg 243
              ||||||||||||||||||||
Sbjct: 124914 tctaacagacatctcaaatg 124895


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,483,508
Number of Sequences: 3902068
Number of extensions: 6483508
Number of successful extensions: 135355
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135138
Number of HSP's gapped (non-prelim): 217
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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