ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags34b09 |
|---|---|
| Clone Library Name | barley_pub |
>NUSB_THETN (Q8RAD1) N utilization substance protein B homolog (Protein nusB)| Length = 140 Score = 55.1 bits (131), Expect = 2e-07 Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%) Frame = -2 Query: 702 GWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMTSKGTPHKVAINEAVDLAKR 529 G +H+E I++ I ++ KD P+ R+ ++L IL +M EM P ++INEAV++AK+ Sbjct: 50 GTVEHLEEIDREIEKYSKDWPLYRMPRIDLAILRCSMYEMLYGNIPVSISINEAVEIAKK 109 Query: 528 FCDGGAPRVINGCLRTYVKD 469 + +P ING L +V++ Sbjct: 110 YSTDDSPSFINGLLGAFVRE 129
>NUSB_STRR6 (P65583) N utilization substance protein B homolog (Protein nusB)| Length = 140 Score = 51.2 bits (121), Expect = 3e-06 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQH----WKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAV 544 + SG E ++K I QH W E + ++E +L + + E+TS TP VA+NEA+ Sbjct: 55 LVSGVQAKKEELDKQITQHLKAGWTIERLT-LVERNLLRLGVFEITSFDTPQLVAVNEAI 113 Query: 543 DLAKRFCDGGAPRVINGCLRTYVKD 469 +LAK F D + R ING L +V + Sbjct: 114 ELAKDFSDQKSARFINGLLSQFVTE 138
>NUSB_STRPN (P65582) N utilization substance protein B homolog (Protein nusB)| Length = 140 Score = 51.2 bits (121), Expect = 3e-06 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQH----WKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAV 544 + SG E ++K I QH W E + ++E +L + + E+TS TP VA+NEA+ Sbjct: 55 LVSGVQAKKEELDKQITQHLKAGWTIERLT-LVERNLLRLGVFEITSFDTPQLVAVNEAI 113 Query: 543 DLAKRFCDGGAPRVINGCLRTYVKD 469 +LAK F D + R ING L +V + Sbjct: 114 ELAKDFSDQKSARFINGLLSQFVTE 138
>NUSB_STAAW (P65579) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 51.2 bits (121), Expect = 3e-06 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDL 538 + SG H V+++ I + KD +AR+L+ IL +A E+ TP KV +NEAV+L Sbjct: 48 LVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVEL 107 Query: 537 AKRFCDGGAPRVINGCLRTYVK 472 K+F D + ING L K Sbjct: 108 TKQFSDDDHYKFINGVLSNIKK 129
>NUSB_STAAS (Q6G941) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 51.2 bits (121), Expect = 3e-06 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDL 538 + SG H V+++ I + KD +AR+L+ IL +A E+ TP KV +NEAV+L Sbjct: 48 LVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVEL 107 Query: 537 AKRFCDGGAPRVINGCLRTYVK 472 K+F D + ING L K Sbjct: 108 TKQFSDDDHYKFINGVLSNIKK 129
>NUSB_STAAN (P65578) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 51.2 bits (121), Expect = 3e-06 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDL 538 + SG H V+++ I + KD +AR+L+ IL +A E+ TP KV +NEAV+L Sbjct: 48 LVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVEL 107 Query: 537 AKRFCDGGAPRVINGCLRTYVK 472 K+F D + ING L K Sbjct: 108 TKQFSDDDHYKFINGVLSNIKK 129
>NUSB_STAAM (P65577) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 51.2 bits (121), Expect = 3e-06 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDL 538 + SG H V+++ I + KD +AR+L+ IL +A E+ TP KV +NEAV+L Sbjct: 48 LVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVEL 107 Query: 537 AKRFCDGGAPRVINGCLRTYVK 472 K+F D + ING L K Sbjct: 108 TKQFSDDDHYKFINGVLSNIKK 129
>NUSB_STAAC (Q5HFP7) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 51.2 bits (121), Expect = 3e-06 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDL 538 + SG H V+++ I + KD +AR+L+ IL +A E+ TP KV +NEAV+L Sbjct: 48 LVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVEL 107 Query: 537 AKRFCDGGAPRVINGCLRTYVK 472 K+F D + ING L K Sbjct: 108 TKQFSDDDHYKFINGVLSNIKK 129
>NUSB_STAAR (Q6GGH4) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 50.8 bits (120), Expect = 4e-06 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDL 538 + SG H V+++ I + KD +AR+L+ IL +A E+ TP KV +NEAV+L Sbjct: 48 LVSGVKDHEPVLDETISPNLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVEL 107 Query: 537 AKRFCDGGAPRVINGCLRTYVK 472 K+F D + ING L K Sbjct: 108 TKQFSDDDHYKFINGVLSNIKK 129
>NUSB_STAES (Q8CP37) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 49.7 bits (117), Expect = 9e-06 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARIL--ELCILHIAMAEMTSKGTPHKVAINEAVDL 538 + +G H V+++ I H KD + R+L + IL +A E+ TP KV +NEAV+L Sbjct: 48 LVTGVKDHQIVLDETIKPHLKDWSIDRLLKSDRIILRMATFEILHSDTPKKVVVNEAVEL 107 Query: 537 AKRFCDGGAPRVINGCL 487 K+F D + +NG L Sbjct: 108 TKQFSDDDHYKFVNGVL 124
>NUSB_STAEQ (Q5HP28) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 49.7 bits (117), Expect = 9e-06 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARIL--ELCILHIAMAEMTSKGTPHKVAINEAVDL 538 + +G H V+++ I H KD + R+L + IL +A E+ TP KV +NEAV+L Sbjct: 48 LVTGVKDHQIVLDETIKPHLKDWSIDRLLKSDRIILRMATFEILHSDTPKKVVVNEAVEL 107 Query: 537 AKRFCDGGAPRVINGCL 487 K+F D + +NG L Sbjct: 108 TKQFSDDDHYKFVNGVL 124
>NUSB_SYNY3 (P74395) N utilization substance protein B homolog (Protein nusB)| Length = 221 Score = 49.3 bits (116), Expect = 1e-05 Identities = 28/57 (49%), Positives = 37/57 (64%) Frame = -2 Query: 654 WKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLR 484 W+ +A+I + IL +A+AE+ G P KVAINEAV+LAKR+ R ING LR Sbjct: 148 WQLSRLAKI-DQDILRLAIAELDYLGVPQKVAINEAVELAKRYSGQDGHRFINGVLR 203
>NUSB_SYNP7 (Q8GIR7) N utilization substance protein B homolog (Protein nusB)| Length = 213 Score = 49.3 bits (116), Expect = 1e-05 Identities = 29/57 (50%), Positives = 36/57 (63%) Frame = -2 Query: 654 WKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLR 484 W+ V R L+ IL +A AE+ GTP +VAINEAV+LA R+ D R ING LR Sbjct: 141 WQLHRVPR-LDQDILRLAAAEILFLGTPEQVAINEAVELANRYSDEEGRRFINGVLR 196
>NUSB_BACAN (Q81M49) N utilization substance protein B homolog (Protein nusB)| Length = 130 Score = 48.1 bits (113), Expect = 3e-05 Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 4/82 (4%) Frame = -2 Query: 702 GWDQHVEVINKIIPQH---WKDEPVARILELCILHIAMAEMT-SKGTPHKVAINEAVDLA 535 G+ ++ EVI++ I Q+ WK E ++ I++ IL +A+ EM + PH V INEA+++A Sbjct: 49 GFVENKEVIDEAIRQNLKKWKLERIS-IVDRSILRVAVYEMKYMEEIPHNVTINEAIEIA 107 Query: 534 KRFCDGGAPRVINGCLRTYVKD 469 K F D + R ING L + +KD Sbjct: 108 KTFGDEESRRFINGVL-SNIKD 128
>NUSB_SYNEL (Q8DKS0) N utilization substance protein B homolog (Protein nusB)| Length = 212 Score = 48.1 bits (113), Expect = 3e-05 Identities = 28/67 (41%), Positives = 43/67 (64%) Frame = -2 Query: 684 EVINKIIPQHWKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPR 505 E++N+ + W+ E + + L+ I+ IA+ EM +VAINEA++LAKR+ D G+ R Sbjct: 133 ELVNRSMVD-WQLERLTQ-LDRAIIEIAVVEMRYLEVAKQVAINEAIELAKRYSDEGSHR 190 Query: 504 VINGCLR 484 ING LR Sbjct: 191 FINGVLR 197
>NUSB_ANASP (Q8YW56) N utilization substance protein B homolog (Protein nusB)| Length = 211 Score = 47.4 bits (111), Expect = 4e-05 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Frame = -2 Query: 681 VINKIIPQHWKDEPVARILELC--ILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAP 508 VI++ I D V R+ ++ IL IA+AEM P+ VAINEAV+LAKR+ Sbjct: 133 VIDEQITSALVDWQVTRLAQIDRDILRIAVAEMMFFNLPNSVAINEAVELAKRYSGDEGH 192 Query: 507 RVINGCLR 484 R ING LR Sbjct: 193 RFINGVLR 200
>NUSB_VIBVY (Q7MN52) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 47.4 bits (111), Expect = 4e-05 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = -2 Query: 690 HVEVINKIIPQHWKDEPVARILELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGG 514 H E+ +KI P + ++EL +L +AM EMT + P+KV INEA++LAK F Sbjct: 77 HTELDSKIRPYVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINEAIELAKVFAAED 136 Query: 513 APRVINGCL 487 + + +NG L Sbjct: 137 SHKFVNGVL 145
>NUSB_VIBVU (Q8DFA0) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 47.4 bits (111), Expect = 4e-05 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = -2 Query: 690 HVEVINKIIPQHWKDEPVARILELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGG 514 H E+ +KI P + ++EL +L +AM EMT + P+KV INEA++LAK F Sbjct: 77 HTELDSKIRPYVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINEAIELAKVFAAED 136 Query: 513 APRVINGCL 487 + + +NG L Sbjct: 137 SHKFVNGVL 145
>NUSB_VIBPA (Q87RU3) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 47.4 bits (111), Expect = 4e-05 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = -2 Query: 690 HVEVINKIIPQHWKDEPVARILELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGG 514 H E+ +KI P + ++EL +L +AM EMT + P+KV INEA++LAK F Sbjct: 77 HAELDSKIRPYVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINEAIELAKVFAAED 136 Query: 513 APRVINGCL 487 + + +NG L Sbjct: 137 SHKFVNGVL 145
>NUSB_BACCR (Q818R4) N utilization substance protein B homolog (Protein nusB)| Length = 130 Score = 46.6 bits (109), Expect = 8e-05 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 4/82 (4%) Frame = -2 Query: 702 GWDQHVEVINKIIPQH---WKDEPVARILELCILHIAMAEMT-SKGTPHKVAINEAVDLA 535 G+ ++ E I++ I Q+ WK E ++ I++ IL +A+ EM + PH V INEA+++A Sbjct: 49 GFVENKEAIDEAIRQNLKKWKLERIS-IVDRSILRVAVYEMKYMEEIPHNVTINEAIEIA 107 Query: 534 KRFCDGGAPRVINGCLRTYVKD 469 K F D + R ING L + +KD Sbjct: 108 KTFGDEESRRFINGVL-SNIKD 128
>NUSB_BACSU (P54520) N utilization substance protein B homolog (Protein nusB)| Length = 131 Score = 46.2 bits (108), Expect = 1e-04 Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 4/79 (5%) Frame = -2 Query: 693 QHVEVINKIIPQH---WKDEPVARILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRF 526 +H + ++++I +H WK + +A + + IL +A EM ++ P V++NEA++LAKRF Sbjct: 50 EHQDQLDEMISKHLVNWKLDRIANV-DRAILRLAAYEMAYAEDIPVNVSMNEAIELAKRF 108 Query: 525 CDGGAPRVINGCLRTYVKD 469 D A + +NG L D Sbjct: 109 GDDKATKFVNGVLSNIKSD 127
>NUSB_GLOVI (Q7NKZ0) N utilization substance protein B homolog (Protein nusB)| Length = 211 Score = 46.2 bits (108), Expect = 1e-04 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Frame = -2 Query: 654 WKDEPVARILELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 478 W+ E + RI + IL +A+ EM K P +VAI+EAV+LAK++ A R ING LR Sbjct: 141 WQVERLTRI-DRDILRLALVEMVELKSVPFRVAIDEAVELAKKYSTDTAVRFINGVLRRV 199 Query: 477 VK 472 V+ Sbjct: 200 VQ 201
>NUSB_WOLSU (Q7MAE9) N utilization substance protein B homolog (Protein nusB)| Length = 135 Score = 45.8 bits (107), Expect = 1e-04 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Frame = -2 Query: 690 HVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDG 517 H+ I++ I +H K+ +RI +E IL + E+ G V INEAV+L+K F + Sbjct: 56 HLGEIDEEIKKHLKEWDFSRIGDMERAILRLGTFEIVYSGVDRAVIINEAVELSKTFGND 115 Query: 516 GAPRVINGCL 487 +PR +NG L Sbjct: 116 NSPRFVNGVL 125
>NUSB_LACLA (Q9CHN4) N utilization substance protein B homolog (Protein nusB)| Length = 192 Score = 45.4 bits (106), Expect = 2e-04 Identities = 25/69 (36%), Positives = 40/69 (57%) Frame = -2 Query: 678 INKIIPQHWKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVI 499 I+K + + W + ++E IL ++ E+ TP VA+NEAV+L+K F D + R I Sbjct: 125 ISKYLTKTWSFSRLT-LVEQAILQVSSYEILYTETPDVVAVNEAVELSKDFSDEKSSRFI 183 Query: 498 NGCLRTYVK 472 NG L ++K Sbjct: 184 NGVLTNFLK 192
>NUSB_ENTFA (Q836W8) N utilization substance protein B homolog (Protein nusB)| Length = 154 Score = 45.1 bits (105), Expect = 2e-04 Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Frame = -2 Query: 684 EVINKIIPQHWKDEPVARILELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAP 508 EVI + +W + +A+I ++ IL +A+ EM P+ VA+NEAV+L+K++ D + Sbjct: 78 EVITNHLGNNWSMQRLAKI-DIVILRLAIFEMLYVSDVPNIVALNEAVELSKKYSDDRSR 136 Query: 507 RVINGCLRTYVKD 469 + +NG L +K+ Sbjct: 137 KFVNGVLSNVMKE 149
>NUSB_VIBCH (Q9KPU5) N utilization substance protein B homolog (Protein nusB)| Length = 156 Score = 44.7 bits (104), Expect = 3e-04 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = -2 Query: 690 HVEVINKIIPQHWKDEPVARILELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGG 514 H E+ +K+ P + ++EL +L +AM EMT + P+KV INEA++LAK F Sbjct: 77 HNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINEAIELAKVFAAED 136 Query: 513 APRVINGCL 487 + + +NG L Sbjct: 137 SHKFVNGVL 145
>NUSB_RHOBA (Q7USA9) N utilization substance protein B homolog (Protein nusB)| Length = 145 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/50 (44%), Positives = 30/50 (60%) Frame = -2 Query: 615 ILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDH 466 +L + E+ GTP +VAI+EA+ LAKR+ +PR ING L K H Sbjct: 88 VLRLGAYEILYSGTPGQVAISEALTLAKRYGGENSPRFINGVLDRLFKYH 137
>NUSB_STRP8 (P65585) N utilization substance protein B homolog (Protein nusB)| Length = 150 Score = 42.0 bits (97), Expect = 0.002 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQH----WKDEPVARILELCILHIAMAEMTS-KGTPHKVAINE 550 ++ +G + H E ++ +I H W E + + + +L + + E+ TP +VA+NE Sbjct: 58 SLVTGVNNHKEELDNLISTHLKKGWSLERLT-LTDKTLLRLGLFEIKYFDETPDRVALNE 116 Query: 549 AVDLAKRFCDGGAPRVINGCLRTYVKDHMSNGTS 448 +++AK++ D + + ING L YV + S S Sbjct: 117 IIEVAKKYSDETSAKFINGLLSQYVSEAPSANKS 150
>NUSB_STRP6 (Q5XA94) N utilization substance protein B homolog (Protein nusB)| Length = 150 Score = 42.0 bits (97), Expect = 0.002 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQH----WKDEPVARILELCILHIAMAEMTS-KGTPHKVAINE 550 ++ +G + H E ++ +I H W E + + + +L + + E+ TP +VA+NE Sbjct: 58 SLVTGVNNHKEELDNLISTHLKKGWSLERLT-LTDKTLLRLGLFEIKYFDETPDRVALNE 116 Query: 549 AVDLAKRFCDGGAPRVINGCLRTYVKDHMSNGTS 448 +++AK++ D + + ING L YV + S S Sbjct: 117 IIEVAKKYSDETSAKFINGLLSQYVSEAPSANKS 150
>NUSB_STRP3 (P65584) N utilization substance protein B homolog (Protein nusB)| Length = 150 Score = 42.0 bits (97), Expect = 0.002 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQH----WKDEPVARILELCILHIAMAEMTS-KGTPHKVAINE 550 ++ +G + H E ++ +I H W E + + + +L + + E+ TP +VA+NE Sbjct: 58 SLVTGVNNHKEELDNLISTHLKKGWSLERLT-LTDKTLLRLGLFEIKYFDETPDRVALNE 116 Query: 549 AVDLAKRFCDGGAPRVINGCLRTYVKDHMSNGTS 448 +++AK++ D + + ING L YV + S S Sbjct: 117 IIEVAKKYSDETSAKFINGLLSQYVSEAPSANKS 150
>NUSB_CAMJR (Q5HW85) N utilization substance protein B homolog (Protein nusB)| Length = 132 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -2 Query: 627 LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVK 472 +E IL + E+ TP + INEA++LAK + +P+ ING L +K Sbjct: 78 VERAILRLGAYELLFTDTPSAIVINEAIELAKELANDNSPKFINGVLDALIK 129
>NUSB_CAMJE (Q9PIC0) N utilization substance protein B homolog (Protein nusB)| Length = 132 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -2 Query: 627 LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVK 472 +E IL + E+ TP + INEA++LAK + +P+ ING L +K Sbjct: 78 VERAILRLGAYELLFTDTPSAIVINEAIELAKELANDNSPKFINGVLDALIK 129
>NUSB_HELHP (Q7VK55) N utilization substance protein B homolog (Protein nusB)| Length = 157 Score = 40.8 bits (94), Expect = 0.004 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 3/93 (3%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMTSKGTPHKVAINEAVD 541 ++ G +H+ I+ I + K+ +R+ +E +L + E+ T V INEAV+ Sbjct: 48 SLLQGVIEHLSQIDLCIAPYLKEWEFSRLGGMERAMLRLGAFEILYTETDTPVIINEAVE 107 Query: 540 LAKRFC-DGGAPRVINGCLRTYVKDHMSNGTSQ 445 L K + + APR ING L K H N S+ Sbjct: 108 LGKMYGGEDNAPRFINGVLDALSKAHTKNKKSE 140
>NUSB_LACPL (Q88WM9) N utilization substance protein B homolog (Protein nusB)| Length = 139 Score = 40.4 bits (93), Expect = 0.005 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = -2 Query: 678 INKIIPQHWKDEPVARILELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRV 502 I + Q W + +A+ +L IL IA E+ P KVA+NEA++L K F D + + Sbjct: 67 IQPYLSQKWSLDRLAKT-DLIILRIAFFELQFVDDVPTKVAVNEAIELTKAFSDDRSRKF 125 Query: 501 INGCLRTYVKD 469 ++G L VK+ Sbjct: 126 VSGVLGKVVKN 136
>NUSB_OCEIH (Q8EQ42) N utilization substance protein B homolog (Protein nusB)| Length = 126 Score = 40.4 bits (93), Expect = 0.005 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAE-MTSKGTPHKVAINEAV 544 ++ G QH VI++ I H + + RI +E IL +A+ E M P V+INEA+ Sbjct: 43 SLVEGVIQHKSVIDEKISTHLEKWTIDRIASVERTILRMAILEIMYIDDIPQNVSINEAI 102 Query: 543 DLAKRFCDGGAPRVINGCL 487 +LA F D + + +NG L Sbjct: 103 ELAHTFGDEQSGKFVNGVL 121
>NUSB_CLOTE (Q894G5) N utilization substance protein B homolog (Protein nusB)| Length = 153 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%) Frame = -2 Query: 702 GWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMT-SKGTPHKVAINEAVDLAK 532 G +++ +V+++ I ++ K+ + R+ ++L IL + E+ S P VAINE V+LAK Sbjct: 72 GVEENSKVLDEHIEKYLKNWTLNRLAKVDLAILRLCSYEILFSNEVPDNVAINEGVELAK 131 Query: 531 RFCDGGAPRVINGCLRTYVK 472 ++ D +P IN L K Sbjct: 132 KYGDDKSPAFINAVLDKIAK 151
>NUSB_BIFLO (Q8G817) N utilization substance protein B homolog (Protein nusB)| Length = 190 Score = 39.7 bits (91), Expect = 0.009 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVAR--ILELCILHIAMAEMT-SKGTPHKVAINEAVD 541 + G +H I+ + +H V R +++ IL IA E+ + P KVAI+EA+ Sbjct: 48 IVKGVAEHRRQIDMTLDEHSTGWKVRRMGVVDRNILRIAAWEILFTDDVPDKVAIDEALA 107 Query: 540 LAKRFCDGGAPRVINGCL 487 LAK CD +P I+G L Sbjct: 108 LAKTLCDDDSPAFIHGLL 125
>NUSB_SHIFL (P0A783) N utilization substance protein B (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.009 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVL 127
>NUSB_SALTY (Q8ZRD3) N utilization substance protein B homolog (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.009 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALFELSKRSDVPYKVAINEAIELAKTFGAEDSHKFVNGVL 127
>NUSB_SALTI (Q8Z8X6) N utilization substance protein B homolog (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.009 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALFELSKRSDVPYKVAINEAIELAKTFGAEDSHKFVNGVL 127
>NUSB_ECOLI (P0A780) N utilization substance protein B (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.009 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVL 127
>NUSB_ECOL6 (P0A781) N utilization substance protein B (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.009 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVL 127
>NUSB_ECO57 (P0A782) N utilization substance protein B (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.009 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVL 127
>NUSB_YERPE (Q8ZC42) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 39.3 bits (90), Expect = 0.012 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VERAVLRIALFELSKRDDVPYKVAINEAIELAKTFGAEDSHKFVNGVL 127
>NUSB_PHOLL (Q7N0J0) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 39.3 bits (90), Expect = 0.012 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E IL IAM E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAILRIAMFELSYRDDVPYKVAINEAIELAKVFGAEDSHKFVNGVL 127
>NUSB_STRP1 (Q99Y88) N utilization substance protein B homolog (Protein nusB)| Length = 150 Score = 39.3 bits (90), Expect = 0.012 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQH----WKDEPVARILELCILHIAMAEMTS-KGTPHKVAINE 550 ++ +G + H E ++ +I H W E + + + +L + + E+ TP +VA+NE Sbjct: 58 SLVTGVNNHKEELDNLISTHLKKGWSLERLT-LTDKTLLRLGLFEIKYFDKTPDRVALNE 116 Query: 549 AVDLAKRFCDGGAPRVINGCLRTYV 475 +++ K++ D + + ING L YV Sbjct: 117 IIEVVKKYSDETSAKFINGLLSQYV 141
>NUSB_MYCLE (Q9CCR9) N utilization substance protein B homolog (Protein nusB)| Length = 190 Score = 39.3 bits (90), Expect = 0.012 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMT-SKGTPHKVAINEAVD 541 VA G +H I+++I H + + R+ ++ IL +++ E+ + P VA++EAV+ Sbjct: 56 VAQGVSEHTARIDELIISHLQGWKLDRLPAVDRAILRVSIWELLYADDVPEPVAVDEAVE 115 Query: 540 LAKRFCDGGAPRVINGCL 487 LAK +P +NG L Sbjct: 116 LAKELSTDDSPGFVNGLL 133
>NUSB_CLOPE (Q8XJD6) N utilization substance protein B homolog (Protein nusB)| Length = 135 Score = 39.3 bits (90), Expect = 0.012 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Frame = -2 Query: 702 GWDQHVEVINKIIPQH---WKDEPVARILELCILHIAMAEMT-SKGTPHKVAINEAVDLA 535 G +++ E ++ +I WK ++++ L IL I+ E+ ++ P KV+INEA++L Sbjct: 53 GIEENKEKLDSLIESQLVKWKLNRISKV-NLSILRISTYEILFAEDVPGKVSINEAIELC 111 Query: 534 KRFCDGGAPRVINGCLRTYVKD 469 K++ D + ING L K+ Sbjct: 112 KKYSDNKSVSFINGVLDKVYKN 133
>NUSB_SHEON (Q8EBP4) N utilization substance protein B homolog (Protein nusB)| Length = 134 Score = 39.3 bits (90), Expect = 0.012 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Frame = -2 Query: 648 DEPVARI--LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 D P+ + +E I+ +A E+T K P KVAINEA++LAK F + + +NG L Sbjct: 71 DRPIDEVSPVEKAIVRLAAYELTFRKDVPFKVAINEAIELAKAFGADESHKFVNGLL 127
>NUSB_CLOAB (Q97HC8) N utilization substance protein B homolog (Protein nusB)| Length = 135 Score = 38.9 bits (89), Expect = 0.016 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMT-SKGTPHKVAINEAVD 541 + G D+++E I+ I + K ++RI + + IL +A E+ K P KV+ NEAV+ Sbjct: 48 ILRGIDENMEYIDSKIEESSKKWKISRISKINITILRMAAYEIFFEKDIPCKVSANEAVE 107 Query: 540 LAKRFCDGGAPRVINGCL 487 LAK + + + +NG + Sbjct: 108 LAKSYAEENSFSFVNGVI 125
>NUSB_PSEAE (Q9HWX6) N utilization substance protein B homolog (Protein nusB)| Length = 159 Score = 38.5 bits (88), Expect = 0.021 Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Frame = -2 Query: 648 DEPVARI--LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 D P+A I +EL IL ++ E+ ++ P+KV INE ++LAK F + +NG L Sbjct: 86 DRPLAEIDPVELAILRLSTYELRNRIDVPYKVVINEGIELAKTFGATDGHKFVNGVL 142
>NUSB_BLOFL (Q7VRI1) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 38.5 bits (88), Expect = 0.021 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Frame = -2 Query: 627 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDHMSNG 454 +E +L IA+ E+T P+KV INEA++LAK F + + ING L + + + G Sbjct: 80 IEYSVLLIALFELTQCCDVPYKVVINEAIELAKIFGSEKSHKFINGVLDKIITEKLYKG 138
>NUSB_VIBFI (Q8G9G3) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 38.5 bits (88), Expect = 0.021 Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +EL +L +++ EM ++ P+KV INEA++LAK F + + +NG L Sbjct: 98 MELALLRMSIYEMMNRDDVPYKVVINEAIELAKVFAAEDSHKFVNGVL 145
>NUSB_BACHD (Q9K965) N utilization substance protein B homolog (Protein nusB)| Length = 134 Score = 38.5 bits (88), Expect = 0.021 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMTS-KGTPHKVAINEAVD 541 + SG H E ++++ H + V RI ++ IL +A+ E+ P V+ NEA++ Sbjct: 45 LVSGTVTHQEELDRLYADHLQGWTVDRIGNVDRAILRMALYELYYVDDIPKNVSFNEAIE 104 Query: 540 LAKRFCDGGAPRVINGCL 487 LAK F A R ING L Sbjct: 105 LAKAFGGEDAGRFINGVL 122
>NUSB_STRMU (Q8DSE9) N utilization substance protein B homolog (Protein nusB)| Length = 142 Score = 38.1 bits (87), Expect = 0.027 Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = -2 Query: 630 ILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYV 475 +++ +L + + E+ K TP +VA+NE +++AK++ D + + ING L +V Sbjct: 86 LIDKSLLRLGLYEIKYHKETPERVALNEIIEIAKKYSDEKSSKFINGVLSQFV 138
>NUSB_MYCTU (P95020) N utilization substance protein B homolog (Protein nusB)| Length = 156 Score = 38.1 bits (87), Expect = 0.027 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMT-SKGTPHKVAINEAV 544 AVA G +H I+ +I H + + R+ ++ IL +++ E+ + P V ++EAV Sbjct: 57 AVARGVSEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAV 116 Query: 543 DLAKRFCDGGAPRVINGCL 487 LAK +P +NG L Sbjct: 117 QLAKELSTDDSPGFVNGVL 135
>NUSB_MYCBO (Q7TYC8) N utilization substance protein B homolog (Protein nusB)| Length = 156 Score = 38.1 bits (87), Expect = 0.027 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMT-SKGTPHKVAINEAV 544 AVA G +H I+ +I H + + R+ ++ IL +++ E+ + P V ++EAV Sbjct: 57 AVARGVSEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAV 116 Query: 543 DLAKRFCDGGAPRVINGCL 487 LAK +P +NG L Sbjct: 117 QLAKELSTDDSPGFVNGVL 135
>NUSB_CHLTE (Q8KBS4) N utilization substance protein B homolog (Protein nusB)| Length = 164 Score = 38.1 bits (87), Expect = 0.027 Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Frame = -2 Query: 684 EVINKIIPQHWKDEPVARI--LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCD-G 517 E I++ I +H + ++RI ++ IL +A+AE+ + P KV+INEA+++AK+F Sbjct: 60 EEIDRYIAKHTFNWDMSRIAIIDKNILRMALAEILYCEDIPPKVSINEAIEIAKKFSSTD 119 Query: 516 GAPRVINGCLRTYVKDHMSNG 454 + + +NG L D + G Sbjct: 120 KSSKFVNGILDAIFNDMKAEG 140
>NUSB_AQUAE (O66530) N utilization substance protein B homolog (Protein nusB)| Length = 148 Score = 37.7 bits (86), Expect = 0.035 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 4/92 (4%) Frame = -2 Query: 693 QHVEVINKIIPQHWKDEPVARI--LELCILHIAMAEMT--SKGTPHKVAINEAVDLAKRF 526 +H+E I+ II +H K + R+ +E L + +AE+ P +V I + VDL K++ Sbjct: 56 RHIEEIDSIIEKHLKGWSIDRLGYVERNALRLGVAELIFLKSKEPGRVFI-DIVDLVKKY 114 Query: 525 CDGGAPRVINGCLRTYVKDHMSNGTSQTAESK 430 D A + +NG L K ++++ + K Sbjct: 115 ADEKAGKFVNGVLSAIYKAYITSSKEEKPSLK 146
>NUSB_FUSNN (Q8RII1) N utilization substance protein B homolog (Protein nusB)| Length = 153 Score = 37.0 bits (84), Expect = 0.060 Identities = 23/80 (28%), Positives = 40/80 (50%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAVDLAK 532 +A +D ++I K Q+W E + ++E +L +A E K P +V NE ++LAK Sbjct: 73 IAKNYDNIKDIIKKNT-QNWAYERIG-VVERALLIVATYEFIFKNAPIEVIANEIIELAK 130 Query: 531 RFCDGGAPRVINGCLRTYVK 472 + + + +NG L K Sbjct: 131 EYGNEKSYEFVNGILANIEK 150
>NUSB_STRA5 (P65581) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 36.6 bits (83), Expect = 0.078 Identities = 20/84 (23%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQH----WKDEPVARILELCILHIAMAEMTS-KGTPHKVAINEA 547 + +G H + ++ +I H W E + +++ +L + + E+ TP +VA+NE Sbjct: 58 LVNGVVDHKDELDTLISSHLKSGWSLERLT-LVDKSLLRLGLYEIKYFDETPDRVALNEI 116 Query: 546 VDLAKRFCDGGAPRVINGCLRTYV 475 +++AK++ D + + +NG L ++ Sbjct: 117 IEIAKKYSDETSAKFVNGLLSQFI 140
>NUSB_STRA3 (P65580) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 36.6 bits (83), Expect = 0.078 Identities = 20/84 (23%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQH----WKDEPVARILELCILHIAMAEMTS-KGTPHKVAINEA 547 + +G H + ++ +I H W E + +++ +L + + E+ TP +VA+NE Sbjct: 58 LVNGVVDHKDELDTLISSHLKSGWSLERLT-LVDKSLLRLGLYEIKYFDETPDRVALNEI 116 Query: 546 VDLAKRFCDGGAPRVINGCLRTYV 475 +++AK++ D + + +NG L ++ Sbjct: 117 IEIAKKYSDETSAKFVNGLLSQFI 140
>NUSB_THEMA (Q9X286) N utilization substance protein B homolog (Protein nusB)| Length = 142 Score = 36.2 bits (82), Expect = 0.10 Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = -2 Query: 702 GWDQHVEVINKIIPQHWKDEPVAR--ILELCILHIAMAEMT-SKGTPHKVAINEAVDLAK 532 G +++ +I+ +I ++ + + R +++ +L +A E+ K P +V I+EA+++AK Sbjct: 53 GIKENLSMIDDLISRYLEKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAK 112 Query: 531 RFCDGGAPRVINGCLRTYVKDH 466 R+ + + +NG L K+H Sbjct: 113 RYGTENSGKFVNGILDRIAKEH 134
>NUSB_BUCAP (Q8K9A2) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 35.8 bits (81), Expect = 0.13 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E IL I+ E+ K P+KV+INE ++LAK F + + ING L Sbjct: 82 IEKAILRISFYELYKRKDIPYKVSINEGIELAKLFGSEDSHKFINGVL 129
>NUSB_BUCAI (P57535) N utilization substance protein B homolog (Protein nusB)| Length = 143 Score = 35.0 bits (79), Expect = 0.23 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSKGT-PHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E IL I+ E+ + P+KV+INE ++LAK F + + ING L Sbjct: 80 IERAILRISFYELHKRNDIPYKVSINEGIELAKLFGSEDSHKFINGVL 127
>NUSB_DEIRA (Q9RSQ7) N utilization substance protein B homolog (Protein nusB)| Length = 192 Score = 34.7 bits (78), Expect = 0.30 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQH---WKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAVD 541 + +G ++H E I+ ++ + W + +A+ +L +L +A E+ PH I AV Sbjct: 68 LVTGLERHREAIDDVLHRTIRGWTFDQMAQT-DLNVLRLATYELMYTPEPHPPVIESAVR 126 Query: 540 LAKRFCDGGAPRVINGCL 487 +A++F + R +NG L Sbjct: 127 IARKFGGDDSGRFVNGVL 144
>NUSB_BORPE (Q7VTN3) N utilization substance protein B homolog (Protein nusB)| Length = 154 Score = 34.7 bits (78), Expect = 0.30 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -2 Query: 648 DEPVARI--LELCILHIAMAE-MTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 478 D P+A + +E IL I E M P+KVAINEAV+LAK F + +NG L Sbjct: 80 DRPLAELSPVEHGILLIGSFELMHHVEVPYKVAINEAVELAKSFGGTDGFKFVNGVLDKL 139 Query: 477 VKD 469 D Sbjct: 140 AAD 142
>NUSB_BORPA (Q7W142) N utilization substance protein B homolog (Protein nusB)| Length = 154 Score = 34.7 bits (78), Expect = 0.30 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -2 Query: 648 DEPVARI--LELCILHIAMAE-MTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 478 D P+A + +E IL I E M P+KVAINEAV+LAK F + +NG L Sbjct: 80 DRPLAELSPVEHGILLIGSFELMHHVEVPYKVAINEAVELAKSFGGTDGFKFVNGVLDKL 139 Query: 477 VKD 469 D Sbjct: 140 AAD 142
>NUSB_BORBR (Q7WNT2) N utilization substance protein B homolog (Protein nusB)| Length = 154 Score = 34.7 bits (78), Expect = 0.30 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -2 Query: 648 DEPVARI--LELCILHIAMAE-MTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 478 D P+A + +E IL I E M P+KVAINEAV+LAK F + +NG L Sbjct: 80 DRPLAELSPVEHGILLIGSFELMHHVEVPYKVAINEAVELAKSFGGTDGFKFVNGVLDKL 139 Query: 477 VKD 469 D Sbjct: 140 AAD 142
>NUSB_NEIMB (Q9K0D0) N utilization substance protein B homolog (Protein nusB)| Length = 141 Score = 34.3 bits (77), Expect = 0.39 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -2 Query: 684 EVINKIIPQHWKDEPVARILELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAP 508 E I +I P +DE +E +L A E+++ TP+ V INEA+++ K F Sbjct: 60 EYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGH 119 Query: 507 RVINGCL 487 + +NG L Sbjct: 120 KFVNGIL 126
>NUSB_NEIMA (Q9JVD5) N utilization substance protein B homolog (Protein nusB)| Length = 141 Score = 34.3 bits (77), Expect = 0.39 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -2 Query: 684 EVINKIIPQHWKDEPVARILELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAP 508 E I +I P +DE +E +L A E+++ TP+ V INEA+++ K F Sbjct: 60 EYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGH 119 Query: 507 RVINGCL 487 + +NG L Sbjct: 120 KFVNGIL 126
>NUSB_PASMU (P57868) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 34.3 bits (77), Expect = 0.39 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%) Frame = -2 Query: 681 VINKIIPQHWKDEPVARI--LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGA 511 V N +IP + D V+ + +E IL +A+ E+ + P+KV INEA+++AK F + Sbjct: 69 VDNIMIP--YLDREVSELDPIEKAILRLAVYELKFELDVPYKVVINEAIEVAKVFGAEDS 126 Query: 510 PRVINGCL 487 + +NG L Sbjct: 127 HKYVNGVL 134
>NUSB_HAEIN (P45150) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 34.3 bits (77), Expect = 0.39 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E IL +A+ E+ + P+KV INEA+++AK F + + ING L Sbjct: 87 IETAILRLAVYELRFELDVPYKVVINEAIEVAKVFGADESHKYINGVL 134
>NUSB_LEPIN (Q8F8T8) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 33.9 bits (76), Expect = 0.51 Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAM-AEMTSKGTPHKVAINEAV 544 ++ +G ++ E I+ +I ++ K+ +RI + IL +++ A + + P V I+EAV Sbjct: 48 SIVNGVVKNQEQIDTLIKKYSKNWDFSRISIVNKAILRLSIYALLYTWEVPKNVTIDEAV 107 Query: 543 DLAKRFCDGGAPRVINGCLRTYVKDHMSN 457 +L K F + R +NG L +K+ + + Sbjct: 108 ELTKEFESEESARFVNGVLDAILKNEIKS 136
>NUSB_LEPIC (Q72V97) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 33.9 bits (76), Expect = 0.51 Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Frame = -2 Query: 714 AVASGWDQHVEVINKIIPQHWKDEPVARI--LELCILHIAM-AEMTSKGTPHKVAINEAV 544 ++ +G ++ E I+ +I ++ K+ +RI + IL +++ A + + P V I+EAV Sbjct: 48 SIVNGVVKNQEQIDTLIKKYSKNWDFSRISIVNKAILRLSIYALLYTWEVPKNVTIDEAV 107 Query: 543 DLAKRFCDGGAPRVINGCLRTYVKDHMSN 457 +L K F + R +NG L +K+ + + Sbjct: 108 ELTKEFESEESARFVNGVLDAILKNEIKS 136
>NUSB_STRCO (Q9KXR0) N utilization substance protein B homolog (Protein nusB)| Length = 142 Score = 33.9 bits (76), Expect = 0.51 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVAR--ILELCILHIAMAEMT-SKGTPHKVAINEAVD 541 + G+ E I+++I Q+ D + R +++ IL + E+ TP V ++E V Sbjct: 52 LVEGYAGRAERIDELIAQYSVDWTLDRMPVVDRNILRLGAYELLWVDATPDAVVLDEMVQ 111 Query: 540 LAKRFCDGGAPRVINGCL 487 LAK F +P ING L Sbjct: 112 LAKEFSTDESPAFINGLL 129
>SYE_MYCPE (Q8EU94) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 487 Score = 33.5 bits (75), Expect = 0.66 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 10/72 (13%) Frame = -2 Query: 624 ELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVI----------NGCLRTYV 475 ++ I HI E TP+++AINEA+D+ K G +I N L+ ++ Sbjct: 208 DMLISHIIRGEEHLSNTPYQIAINEALDINKNIVFGHLSVIIDETGKKLSKRNMELKQFI 267 Query: 474 KDHMSNGTSQTA 439 +D+ + G S A Sbjct: 268 EDYKNMGFSPEA 279
>NUSB_CHRVO (Q7NVF2) N utilization substance protein B homolog (Protein nusB)| Length = 149 Score = 33.5 bits (75), Expect = 0.66 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = -2 Query: 687 VEVINKIIPQHW-KDEPVARILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGG 514 VE+++ + +++ + E +E +L +A E+T S TP+ V INEA+++ K F Sbjct: 59 VELLSAQVGRYYERAEDEVSPVERAVLLMAALELTQSPETPYPVIINEAIEITKTFGGTD 118 Query: 513 APRVINGCL 487 + +NG L Sbjct: 119 GHKFVNGVL 127
>NUSB_BUCBP (P59452) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 33.1 bits (74), Expect = 0.87 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E IL I+ E+ + P KV INE+++LAK F + + ING L Sbjct: 82 IEKAILRISFFELDKRYDIPFKVTINESIELAKLFGAKDSHKFINGVL 129
>NUSB_LISMO (Q8Y7C6) N utilization substance protein B homolog (Protein nusB)| Length = 128 Score = 33.1 bits (74), Expect = 0.87 Identities = 15/58 (25%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Frame = -2 Query: 657 HWKDEPVARILELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +W+ + ++++ +L +L +++ E+ P++V++NE++++AK + D + + ING L Sbjct: 64 NWRMDRLSKV-DLSLLRLSVYEIKYLDDVPNRVSLNESIEIAKIYSDEKSSKFINGVL 120
>NUSB_LISMF (Q71ZW3) N utilization substance protein B homolog (Protein nusB)| Length = 128 Score = 33.1 bits (74), Expect = 0.87 Identities = 15/58 (25%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Frame = -2 Query: 657 HWKDEPVARILELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +W+ + ++++ +L +L +++ E+ P++V++NE++++AK + D + + ING L Sbjct: 64 NWRMDRLSKV-DLSLLRLSVYEIKYLDDVPNRVSLNESIEIAKIYSDEKSSKFINGVL 120
>NUSB_XANCP (Q8PCM6) N utilization substance protein B homolog (Protein nusB)| Length = 159 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L +A E+ + P++V INEA++ AKRF +NG L Sbjct: 95 IERAVLRLAAYELLYRQDVPYRVVINEAIETAKRFGSEHGHTYVNGVL 142
>NUSB_XANAC (Q8PPD5) N utilization substance protein B homolog (Protein nusB)| Length = 159 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E +L +A E+ + P++V INEA++ AKRF +NG L Sbjct: 95 IERAVLRLAAYELLYRQDVPYRVVINEAIETAKRFGSEHGHTYVNGVL 142
>NUSB_PSESM (Q889Q5) N utilization substance protein B homolog (Protein nusB)| Length = 165 Score = 32.7 bits (73), Expect = 1.1 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +EL IL ++ E+ + P++V INE ++LAK + + +NG L Sbjct: 101 IELAILRLSTFELLKRIDVPYRVVINEGIELAKVYGSTDGHKFVNGVL 148
>NUSB_STRAW (Q827R4) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 32.7 bits (73), Expect = 1.1 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Frame = -2 Query: 711 VASGWDQHVEVINKIIPQHWKDEPVAR--ILELCILHIAMAEMT-SKGTPHKVAINEAVD 541 + G+ + V I+++I Q+ + R +++ IL + E+ TP V ++EAV Sbjct: 52 LVEGYAKKVNRIDELISQYAVGWTLDRMPVVDRNILRLGTYELLWVDETPDAVVLDEAVQ 111 Query: 540 LAKRFCDGGAPRVINGCL 487 LAK F +P +NG L Sbjct: 112 LAKEFSTDDSPAFVNGLL 129
>NUSB_HAEDU (Q7VNQ2) N utilization substance protein B homolog (Protein nusB)| Length = 137 Score = 32.3 bits (72), Expect = 1.5 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +E IL +A E+ + P+KV INE +++AK F + + ING L Sbjct: 80 IERTILRLATYELKYELDVPYKVVINEGIEVAKVFGSDDSHKYINGIL 127
>NUSB_PSEPK (Q88QH5) N utilization substance protein B homolog (Protein nusB)| Length = 166 Score = 32.3 bits (72), Expect = 1.5 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -2 Query: 627 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +EL +L ++ E+ + P++V INE V+LAK F + +NG L Sbjct: 102 VELAVLRLSTWELIKRVDVPYRVVINEGVELAKVFGATDGHKFVNGVL 149
>NUSB_CAUCR (Q9A8J3) N utilization substance protein B homolog (Protein nusB)| Length = 149 Score = 32.3 bits (72), Expect = 1.5 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = -2 Query: 678 INKIIPQHWKDEPVARILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVI 499 I K + W+ E + + A M P +V INE V++AK F +G I Sbjct: 77 IVKRLASGWRLERLDATARAVLRAGAFELMYRSDVPTEVVINEYVEIAKSFFEGPESGFI 136 Query: 498 NGCLRTYVKD 469 NG L +D Sbjct: 137 NGALDAIARD 146
>NUSB_RALSO (Q8Y1H9) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 32.3 bits (72), Expect = 1.5 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -2 Query: 648 DEPVARI--LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 D PVA + +E L + E+ P+KV INEAV+LAK F + +NG L Sbjct: 83 DRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAVELAKTFGGVEGYKYVNGVL 139
>NUSB_LISIN (Q92BZ5) N utilization substance protein B homolog (Protein nusB)| Length = 128 Score = 32.0 bits (71), Expect = 1.9 Identities = 15/58 (25%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Frame = -2 Query: 657 HWKDEPVARILELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 487 +W+ + + ++ +L +L +++ E+ P++V++NE++++AK + D + + ING L Sbjct: 64 NWRIDRLNKV-DLSLLRLSVYEIKYLDDVPNRVSLNESIEIAKIYSDEKSSKFINGVL 120
>NUSB_RICCN (Q92J65) N utilization substance protein B homolog (Protein nusB)| Length = 156 Score = 30.8 bits (68), Expect = 4.3 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Frame = -2 Query: 693 QHVEVINKIIPQHW---KDEPVARILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRF 526 +++ +++II H KD IL +L +++ E+ TP KV INE D+A Sbjct: 73 ENIHKLDEIIDNHLTNDKDPAHMPILLRALLRVSICELLFCPTTPAKVVINEYTDIANDM 132 Query: 525 CDGGAPRVINGCLRTYVKDH 466 + +N L K+H Sbjct: 133 LNEHEIGFVNSVLDKIAKEH 152
>SEN54_ASHGO (Q74ZJ5) tRNA-splicing endonuclease subunit SEN54 (tRNA-intron| endonuclease SEN54) Length = 455 Score = 30.4 bits (67), Expect = 5.6 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -3 Query: 263 YPQMFNRSRCTT-YVPMMHTRLKQPKGTYYF*QLLHPLNPVIHSMTSVVNFYVNVRLYIS 87 YP + +S ++ + +H+ LK P+ ++ L HPL+ ++H TS Y + +I Sbjct: 200 YPPLSQKSSASSNWFCHIHSWLKTPQNLFHV-PLYHPLHFLLHRYTSSPQLYEELSQHIP 258 Query: 86 ELAAPH 69 PH Sbjct: 259 FKKVPH 264
>AES_RAT (P63003) Amino-terminal enhancer of split (Amino enhancer of split)| (GRG protein) (ESP1 protein) (R-esp1) Length = 197 Score = 30.0 bits (66), Expect = 7.3 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Frame = +3 Query: 177 IVSTLRLLQASVHHRHIGC---ASGPVKHLRIFLDLHEPSFFNYFQVHHS---IKQLNGI 338 I +LLQA H + C AS + R ++ +E S+ ++H +K+LNGI Sbjct: 29 IKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGI 88 Query: 339 CASVV 353 CA V+ Sbjct: 89 CAQVL 93
>AES_MOUSE (P63002) Amino-terminal enhancer of split (Amino enhancer of split)| (GRG protein) (ESP1 protein) (Grg-5) Length = 197 Score = 30.0 bits (66), Expect = 7.3 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Frame = +3 Query: 177 IVSTLRLLQASVHHRHIGC---ASGPVKHLRIFLDLHEPSFFNYFQVHHS---IKQLNGI 338 I +LLQA H + C AS + R ++ +E S+ ++H +K+LNGI Sbjct: 29 IKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGI 88 Query: 339 CASVV 353 CA V+ Sbjct: 89 CAQVL 93
>AES_HUMAN (Q08117) Amino-terminal enhancer of split (Amino enhancer of split)| (GRG protein) (ESP1 protein) (Gp130-associated protein GAM) Length = 197 Score = 30.0 bits (66), Expect = 7.3 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Frame = +3 Query: 177 IVSTLRLLQASVHHRHIGC---ASGPVKHLRIFLDLHEPSFFNYFQVHHS---IKQLNGI 338 I +LLQA H + C AS + R ++ +E S+ ++H +K+LNGI Sbjct: 29 IKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGI 88 Query: 339 CASVV 353 CA V+ Sbjct: 89 CAQVL 93
>RSMB_SYNY3 (P72943) Ribosomal RNA small subunit methyltransferase B (EC| 2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) Length = 446 Score = 30.0 bits (66), Expect = 7.3 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -2 Query: 573 PHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 478 P A+N VDLAK G +V+NG LR Y Sbjct: 94 PASAAVNTGVDLAKANGLKGLSKVVNGMLRRY 125
>GATA3_BRARE (Q91428) Transcription factor GATA-3 (GATA-binding factor 3)| Length = 438 Score = 29.6 bits (65), Expect = 9.6 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +3 Query: 546 PPH*WQLCEEFLSMSSLPWQYEGCRVQGSLQQVHPSNVGELFC**LQHADP 698 PPH Q+C L SLPW +G + G P N+G L H+ P Sbjct: 71 PPHSSQMCRPSLLHGSLPW-LDGGKSIGPHHSTSPWNLGPFPKTSLHHSSP 120
>SPON1_XENLA (P35447) Spondin-1 precursor (F-spondin)| Length = 803 Score = 29.6 bits (65), Expect = 9.6 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +1 Query: 493 SVDHPRSTSITK--PLCQIYRLINGNFVRSSFRCHLCHGNMKD 615 S+DHP+S S+T+ P+ I R++ R +C++ N+ D Sbjct: 376 SLDHPQSPSMTRGGPIIPIARVVIERIARKGEQCNIIPDNVDD 418
>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase 1) Length = 494 Score = 29.6 bits (65), Expect = 9.6 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -2 Query: 366 DWQLKLQKHRSHSVVLLNGEPGSS*RSWAR-EDLEISSNV*PVQMHNLCADDA 211 D+ LK S+S+ + GEP + R W R ED++ NV V N +D A Sbjct: 124 DYLLKASTATSNSLYVQVGEPNADHRCWERPEDMDTPRNVYKVSTQNPGSDVA 176
>MURB_RHOS4 (Q3J4L9) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 308 Score = 29.6 bits (65), Expect = 9.6 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 519 GGAPRVINGCLRTYVKDHMSNGTSQTAESKP 427 GGA R+ GC +YV DH+ + T E +P Sbjct: 122 GGAVRMNAGCYGSYVADHLIEVRAVTREGRP 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,350,118 Number of Sequences: 219361 Number of extensions: 2112652 Number of successful extensions: 4567 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 4415 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4563 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
