ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags34b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469079.1| Oryza sativa (japonica cultivar-group), mRNA 287 2e-74
2dbj|AK066416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 131 3e-27
4gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genom... 131 3e-27
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cyto... 115 2e-22
7gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382... 46 0.16
8dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome 44 0.63
9gb|AC140679.4| Mus musculus BAC clone RP24-511M8 from 1, complet... 44 0.63
10gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complet... 44 0.63
11gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, compl... 42 2.5
12emb|BX901891.12| Zebrafish DNA sequence from clone CH211-175N2 i... 42 2.5
13emb|AL662874.9| Human DNA sequence from clone RP13-24G8 on chrom... 42 2.5
14emb|AL356117.16| Human DNA sequence from clone RP11-258G21 on ch... 42 2.5
15gb|AC095347.6| Homo sapiens 12 BAC RP11-413D8 (Roswell Park Canc... 42 2.5
16gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, com... 42 2.5
17dbj|AB084898.1| Sorghum bicolor ALDH2b mRNA for mitochondrial al... 42 2.5
18ref|NM_101878.2| Arabidopsis thaliana oxidoreductase, acting on ... 40 9.8
19gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence,... 40 9.8
20ref|XM_956573.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.8
21ref|XM_326546.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.8
22gb|AY616680.1| Danio rerio elastase A gene, promoter region 40 9.8
23gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 9.8
24gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome... 40 9.8
25gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete se... 40 9.8
26gb|AC092053.3| Homo sapiens chromosome 3 clone RP11-331G2, compl... 40 9.8
27gb|BT025038.1| Arabidopsis thaliana At1g20270 mRNA, complete cds 40 9.8
28emb|AL670006.1|NCG15G9 Neurospora crassa DNA linkage group V cos... 40 9.8
29emb|BX255910.3| Mouse DNA sequence from clone RP23-398G11 on chr... 40 9.8
30emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in ... 40 9.8
31gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, comp... 40 9.8
32emb|BX510923.8| Zebrafish DNA sequence from clone CH211-214J8 in... 40 9.8
33dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 9.8
34ref|NM_017071.1| Rattus norvegicus insulin receptor (Insr), mRNA 40 9.8
35gb|AC092596.3| Homo sapiens BAC clone RP11-100J5 from 4, complet... 40 9.8
36gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, compl... 40 9.8
37gb|AC092461.6| Homo sapiens BAC clone RP11-232I22 from 2, comple... 40 9.8
38gb|AY085158.1| Arabidopsis thaliana clone 13404 mRNA, complete s... 40 9.8
39gb|AC026234.4|F14O10 Sequence of BAC F14O10 from Arabidopsis tha... 40 9.8
40gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 9.8
41emb|AL929202.6| Zebrafish DNA sequence from clone DKEY-147L19, c... 40 9.8
42emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chr... 40 9.8
43gb|AF027335.1|AF027335 Equus caballus prostaglandin G/H synthase... 40 9.8
44emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2-139g... 40 9.8
45dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.8
46dbj|AP004528.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 9.8
47gb|M29014.1|RATINSAB Rat insulin receptor mRNA, complete cds 40 9.8 
>ref|XM_469079.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1596

 Score =  287 bits (145), Expect = 2e-74
 Identities = 241/273 (88%)
 Strand = Plus / Minus

                                                                       
Query: 439 agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 498
           ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 945 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 886

                                                                       
Query: 499 gatcacccgaggagcacctccatcacaaaaccgctttgccagatctaccgcctcattaat 558
           ||| |||||||||||||| |||||||| ||||| ||||||| ||| || ||||| |||||
Sbjct: 885 gattacccgaggagcaccaccatcacagaaccgttttgccaaatccacagcctcgttaat 826

                                                                       
Query: 559 ggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatatgaaggatgca 618
           | ||| ||||||||| |||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 825 gacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatatgaagaataca 766

                                                                       
Query: 619 gagttcaaggatccttgcaacaggttcatccttccaatgttggggaattattttgttgat 678
            |||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||||
Sbjct: 765 aagttcaaggatccttgcaacaggttcgtccttccaattctggggagttattttgttgat 706

                                            
Query: 679 gacttcaacatgctgatcccatccactggcaac 711
           ||  ||||||||||  |||||||||||||||||
Sbjct: 705 gatatcaacatgcttgtcccatccactggcaac 673
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>dbj|AK066416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A14, full
           insert sequence
          Length = 1601

 Score =  287 bits (145), Expect = 2e-74
 Identities = 241/273 (88%)
 Strand = Plus / Minus

                                                                       
Query: 439 agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 498
           ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 953 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 894

                                                                       
Query: 499 gatcacccgaggagcacctccatcacaaaaccgctttgccagatctaccgcctcattaat 558
           ||| |||||||||||||| |||||||| ||||| ||||||| ||| || ||||| |||||
Sbjct: 893 gattacccgaggagcaccaccatcacagaaccgttttgccaaatccacagcctcgttaat 834

                                                                       
Query: 559 ggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatatgaaggatgca 618
           | ||| ||||||||| |||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 833 gacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatatgaagaataca 774

                                                                       
Query: 619 gagttcaaggatccttgcaacaggttcatccttccaatgttggggaattattttgttgat 678
            |||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||||
Sbjct: 773 aagttcaaggatccttgcaacaggttcgtccttccaattctggggagttattttgttgat 714

                                            
Query: 679 gacttcaacatgctgatcccatccactggcaac 711
           ||  ||||||||||  |||||||||||||||||
Sbjct: 713 gatatcaacatgcttgtcccatccactggcaac 681
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                            
Query: 549      cctcattaatggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatat 608
                |||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 25343830 cctcgttaatgacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatat 25343771

                                                          
Query: 609      gaaggatgcagagttcaaggatccttgcaacaggttcatcct 650
                |||| || || |||||||||||||||||||||||||| ||||
Sbjct: 25343770 gaagaatacaaagttcaaggatccttgcaacaggttcgtcct 25343729



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 439      agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 498
                ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 25344028 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 25343969

                                                         
Query: 499      gatcacccgaggagcacctccatcacaaaaccgctttgcca 539
                ||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 25343968 gattacccgaggagcaccaccatcacagaaccgttttgcca 25343928



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 648      ccttccaatgttggggaattattttgttgatgacttcaacatgctgatcccatccactgg 707
                |||||||||  |||||| |||||||||||||||  ||||||||||  |||||||||||||
Sbjct: 25342475 ccttccaattctggggagttattttgttgatgatatcaacatgcttgtcccatccactgg 25342416

                    
Query: 708      caac 711
                ||||
Sbjct: 25342415 caac 25342412
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>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete
             sequence
          Length = 152828

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                         
Query: 549   cctcattaatggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatat 608
             |||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 99530 cctcgttaatgacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatat 99589

                                                       
Query: 609   gaaggatgcagagttcaaggatccttgcaacaggttcatcct 650
             |||| || || |||||||||||||||||||||||||| ||||
Sbjct: 99590 gaagaatacaaagttcaaggatccttgcaacaggttcgtcct 99631



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                         
Query: 439   agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 498
             ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 99332 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 99391

                                                      
Query: 499   gatcacccgaggagcacctccatcacaaaaccgctttgcca 539
             ||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 99392 gattacccgaggagcaccaccatcacagaaccgttttgcca 99432



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                          
Query: 648    ccttccaatgttggggaattattttgttgatgacttcaacatgctgatcccatccactgg 707
              |||||||||  |||||| |||||||||||||||  ||||||||||  |||||||||||||
Sbjct: 100885 ccttccaattctggggagttattttgttgatgatatcaacatgcttgtcccatccactgg 100944

                  
Query: 708    caac 711
              ||||
Sbjct: 100945 caac 100948
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                            
Query: 549      cctcattaatggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatat 608
                |||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 25435139 cctcgttaatgacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatat 25435080

                                                          
Query: 609      gaaggatgcagagttcaaggatccttgcaacaggttcatcct 650
                |||| || || |||||||||||||||||||||||||| ||||
Sbjct: 25435079 gaagaatacaaagttcaaggatccttgcaacaggttcgtcct 25435038



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 439      agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 498
                ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 25435337 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 25435278

                                                         
Query: 499      gatcacccgaggagcacctccatcacaaaaccgctttgcca 539
                ||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 25435277 gattacccgaggagcaccaccatcacagaaccgttttgcca 25435237



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 648      ccttccaatgttggggaattattttgttgatgacttcaacatgctgatcccatccactgg 707
                |||||||||  |||||| |||||||||||||||  ||||||||||  |||||||||||||
Sbjct: 25433784 ccttccaattctggggagttattttgttgatgatatcaacatgcttgtcccatccactgg 25433725

                    
Query: 708      caac 711
                ||||
Sbjct: 25433724 caac 25433721
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>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like
             protein, putative DNA-binding protein homolog,
             TATA-binding protein, hypothetical protein M3E9.200,
             3-glucanase, K-exchanger-like protein, small heat
             shock-like protein, methionine synthase protein, putative
             far-red impaired response protein, and putative vegetative
             storage protein genes, complete cds
          Length = 100773

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 549   cctcattaatggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatat 608
             ||||||| ||| ||||||||||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 38957 cctcattgatgacaactttgtgaggtgttccttttgatgtcatctctgccatagcaatat 39016

                                                       
Query: 609   gaaggatgcagagttcaaggatccttgcaacaggttcatcct 650
             | || |||||||| ||||| |||||||| ||||| |||||||
Sbjct: 39017 gtagaatgcagagctcaagtatccttgccacaggctcatcct 39058



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                         
Query: 470   tccttcacatatgttcgaaggcatccgttgatcacccgaggagcacctccatcacaaaac 529
             ||||| ||| |||||||||||||||| || || |||||||| ||||| ||||||||||| 
Sbjct: 38737 tcctttacaaatgttcgaaggcatccattaattacccgaggggcaccaccatcacaaaat 38796

                                   
Query: 530   cgctttgccagatctaccgcct 551
             ||||||||||||||||| ||||
Sbjct: 38797 cgctttgccagatctactgcct 38818



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 659   tggggaattattttgttgatgacttcaacatgctgatcccatccactggcaac 711
             ||||||||||||||||  ||||  || ||||||| |||||||||||| |||||
Sbjct: 39289 tggggaattattttgtcaatgatatctacatgcttatcccatccactagcaac 39341
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>gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382E5 map 15q14, complete
             sequence
          Length = 176708

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 8     atgcatgtatcttacaaatatcctctc 34
             ||||| |||||||||||||||||||||
Sbjct: 67942 atgcaggtatcttacaaatatcctctc 67968
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>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome
          Length = 1166239

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 410    tatttacagaaactttatggct 431
              ||||||||||||||||||||||
Sbjct: 907957 tatttacagaaactttatggct 907978
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>gb|AC140679.4| Mus musculus BAC clone RP24-511M8 from 1, complete sequence
          Length = 176052

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 595   tgccatggcaatatgaaggatgcaga 620
             ||||||||||| ||||||||||||||
Sbjct: 27111 tgccatggcaagatgaaggatgcaga 27086
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>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence
          Length = 202209

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 595    tgccatggcaatatgaaggatgcaga 620
              ||||||||||| ||||||||||||||
Sbjct: 189171 tgccatggcaagatgaaggatgcaga 189146
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>gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, complete sequence
          Length = 261450

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 11   catgtatcttacaaatatcct 31
            |||||||||||||||||||||
Sbjct: 4134 catgtatcttacaaatatcct 4154
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>emb|BX901891.12| Zebrafish DNA sequence from clone CH211-175N2 in linkage group 1,
              complete sequence
          Length = 148678

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 401    tgtaatacatatttacagaaa 421
              |||||||||||||||||||||
Sbjct: 102762 tgtaatacatatttacagaaa 102742
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>emb|AL662874.9| Human DNA sequence from clone RP13-24G8 on chromosome X Contains a
             novel gene, a delta sleep inducing peptide, immunoreactor
             (DSIPI) pseudogene, the PABPC5 gene for poly(A) binding
             protein, cytoplasmic 5 and a CpG island, complete sequence
          Length = 160906

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   aaaagtttacaacacttgtca 133
             |||||||||||||||||||||
Sbjct: 71442 aaaagtttacaacacttgtca 71462
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>emb|AL356117.16| Human DNA sequence from clone RP11-258G21 on chromosome 6 Contains part
             of the BAI3 gene for brain-specific angiogenesis inhibitor
             3, complete sequence
          Length = 127079

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    tcttacattcacataaaagtt 119
             |||||||||||||||||||||
Sbjct: 10813 tcttacattcacataaaagtt 10793
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>gb|AC095347.6| Homo sapiens 12 BAC RP11-413D8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 91600

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 666   ttattttgttgatgacttcaa 686
             |||||||||||||||||||||
Sbjct: 59324 ttattttgttgatgacttcaa 59304
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>gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, complete sequence
          Length = 96984

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    catgtatcttacaaatatcct 31
             |||||||||||||||||||||
Sbjct: 92851 catgtatcttacaaatatcct 92831
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>dbj|AB084898.1| Sorghum bicolor ALDH2b mRNA for mitochondrial aldehyde
           dehydrogenase, complete cds
          Length = 2159

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 549 cctcattaatggcaactttgt 569
           |||||||||||||||||||||
Sbjct: 429 cctcattaatggcaactttgt 449
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>ref|NM_101878.2| Arabidopsis thaliana oxidoreductase, acting on paired donors, with
           incorporation or reduction of molecular oxygen,
           2-oxoglutarate as one donor, and > AT1G20270 mRNA,
           complete cds
          Length = 1336

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 665 attattttgttgatgacttcaaca 688
           |||||||||||||||| |||||||
Sbjct: 680 attattttgttgatgagttcaaca 703
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>gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence, alternatively spliced
          Length = 90756

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   ttaaacatttgaggatattt 266
             ||||||||||||||||||||
Sbjct: 19179 ttaaacatttgaggatattt 19198
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>ref|XM_956573.1| Neurospora crassa OR74A hypothetical protein (NCU01054.1) partial
           mRNA
          Length = 858

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 667 tattttgttgatgacttcaacatg 690
           ||||||||||||||||||| ||||
Sbjct: 453 tattttgttgatgacttcatcatg 430
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>ref|XM_326546.1| Neurospora crassa OR74A hypothetical protein (NCU01054.1) partial
           mRNA
          Length = 858

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 667 tattttgttgatgacttcaacatg 690
           ||||||||||||||||||| ||||
Sbjct: 453 tattttgttgatgacttcatcatg 430
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>gb|AY616680.1| Danio rerio elastase A gene, promoter region
          Length = 2875

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  ttacagaaactttatggctt 432
            ||||||||||||||||||||
Sbjct: 1615 ttacagaaactttatggctt 1596
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 582     tcgatgtcatctctgccatg 601
               ||||||||||||||||||||
Sbjct: 4426378 tcgatgtcatctctgccatg 4426397



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 667     tattttgttgatgacttcaa 686
               ||||||||||||||||||||
Sbjct: 4262126 tattttgttgatgacttcaa 4262145
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>gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome 14, complete sequence
          Length = 170494

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 646    atccttccaatgttggggaattat 669
              ||||||||||| ||||||||||||
Sbjct: 121539 atccttccaatcttggggaattat 121562
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>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence
          Length = 117113

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    aactttatggctttgattca 439
              ||||||||||||||||||||
Sbjct: 109575 aactttatggctttgattca 109556
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>gb|AC092053.3| Homo sapiens chromosome 3 clone RP11-331G2, complete sequence
          Length = 176593

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 604   aatatgaaggatgcagagtt 623
             ||||||||||||||||||||
Sbjct: 39856 aatatgaaggatgcagagtt 39875
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>gb|BT025038.1| Arabidopsis thaliana At1g20270 mRNA, complete cds
          Length = 864

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 665 attattttgttgatgacttcaaca 688
           |||||||||||||||| |||||||
Sbjct: 536 attattttgttgatgagttcaaca 559
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>emb|AL670006.1|NCG15G9 Neurospora crassa DNA linkage group V cosmid contig G15G9
          Length = 92230

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 667   tattttgttgatgacttcaacatg 690
             ||||||||||||||||||| ||||
Sbjct: 13107 tattttgttgatgacttcatcatg 13084
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>emb|BX255910.3| Mouse DNA sequence from clone RP23-398G11 on chromosome 11 Contains a
              novel gene and the 3' end of the gene for a novel protein
              (E030025D05Rik), complete sequence
          Length = 179386

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ttcacataaaagtttacaac 125
              ||||||||||||||||||||
Sbjct: 112556 ttcacataaaagtttacaac 112575
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>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5, complete
              sequence
          Length = 156095

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     tacaatcttacattcacata 113
              ||||||||||||||||||||
Sbjct: 155196 tacaatcttacattcacata 155215
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>gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, complete sequence
          Length = 173580

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   aatatgaaggatgcagagtt 623
             ||||||||||||||||||||
Sbjct: 40504 aatatgaaggatgcagagtt 40485
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>emb|BX510923.8| Zebrafish DNA sequence from clone CH211-214J8 in linkage group 5,
              complete sequence
          Length = 165838

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    ttacagaaactttatggctt 432
              ||||||||||||||||||||
Sbjct: 144409 ttacagaaactttatggctt 144390
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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    tagaaatagtaagtaccctt 191
              ||||||||||||||||||||
Sbjct: 649174 tagaaatagtaagtaccctt 649193
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>ref|NM_017071.1| Rattus norvegicus insulin receptor (Insr), mRNA
          Length = 5397

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  aacaggttcatccttccaat 656
            ||||||||||||||||||||
Sbjct: 4833 aacaggttcatccttccaat 4814
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>gb|AC092596.3| Homo sapiens BAC clone RP11-100J5 from 4, complete sequence
          Length = 175644

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    catatttacagaaactttat 427
              ||||||||||||||||||||
Sbjct: 100391 catatttacagaaactttat 100372
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>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence
          Length = 163772

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  ttaaacatttgaggatattt 266
            ||||||||||||||||||||
Sbjct: 1542 ttaaacatttgaggatattt 1523
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>gb|AC092461.6| Homo sapiens BAC clone RP11-232I22 from 2, complete sequence
          Length = 39674

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   ttaaacatttgaggatattt 266
             ||||||||||||||||||||
Sbjct: 39216 ttaaacatttgaggatattt 39197
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>gb|AY085158.1| Arabidopsis thaliana clone 13404 mRNA, complete sequence
          Length = 1337

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 665 attattttgttgatgacttcaaca 688
           |||||||||||||||| |||||||
Sbjct: 681 attattttgttgatgagttcaaca 704
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>gb|AC026234.4|F14O10 Sequence of BAC F14O10 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 53889

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 665   attattttgttgatgacttcaaca 688
             |||||||||||||||| |||||||
Sbjct: 43728 attattttgttgatgagttcaaca 43751
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   acagaaactttatggctttg 434
             ||||||||||||||||||||
Sbjct: 88666 acagaaactttatggctttg 88647
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>emb|AL929202.6| Zebrafish DNA sequence from clone DKEY-147L19, complete sequence
          Length = 105855

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 94   tacaatcttacattcacata 113
            ||||||||||||||||||||
Sbjct: 1101 tacaatcttacattcacata 1120
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>emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chromosome 2, complete
             sequence
          Length = 144077

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 648   ccttccaatgttggggaatt 667
             ||||||||||||||||||||
Sbjct: 60147 ccttccaatgttggggaatt 60166
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>gb|AF027335.1|AF027335 Equus caballus prostaglandin G/H synthase-2 gene, promoter and
            complete cds
          Length = 8479

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  cattcaataaaacaactgaa 331
            ||||||||||||||||||||
Sbjct: 3019 cattcaataaaacaactgaa 3000
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>emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2-139g23, COMPLETE SEQUENCE
          Length = 133229

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 420  aactttatggctttgattca 439
            ||||||||||||||||||||
Sbjct: 4706 aactttatggctttgattca 4687
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>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592,
            complete sequence
          Length = 96561

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 420  aactttatggctttgattca 439
            ||||||||||||||||||||
Sbjct: 9195 aactttatggctttgattca 9214
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>dbj|AP004528.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT03B03, TM0057b,
             complete sequence
          Length = 77452

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   aactttatggctttgattca 439
             ||||||||||||||||||||
Sbjct: 29455 aactttatggctttgattca 29436
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>gb|M29014.1|RATINSAB Rat insulin receptor mRNA, complete cds
          Length = 5397

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  aacaggttcatccttccaat 656
            ||||||||||||||||||||
Sbjct: 4833 aacaggttcatccttccaat 4814


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,648,260
Number of Sequences: 3902068
Number of extensions: 6648260
Number of successful extensions: 119298
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119082
Number of HSP's gapped (non-prelim): 216
length of query: 715
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 692
effective length of database: 17,143,297,704
effective search space: 11863162011168
effective search space used: 11863162011168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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