| Clone Name | rbags33m04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470416.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 442 bits (223), Expect = e-121 Identities = 390/445 (87%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| |||||||| || ||| |||| || ||||| ||||| ||| Sbjct: 575 gatcaggcttttgtctcctgagctacctcttcgaaattctctcccggaacaagctctgga 516 Query: 262 acgtcgtcgtcattctcctccttgggctgga---tggcgcctgcagcagccacctgcttc 318 || || || || ||||| ||||| | |||| |||| ||||||||||| ||||||||| Sbjct: 515 acatcatcatcgttctcttcctttgcctgggcagtggcacctgcagcagctacctgcttc 456 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagggcccaattggttgatg 378 |||||||| || || |||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 455 tgcatctcttcagcaatcctctttaggtgctccatgttgtcaggacccaattggttaatg 396 Query: 379 atagaaggaagaacatcttgtagcttcttggtctggggagtcccactgaccacccatgtg 438 || ||||||||||||||| |||||||||||||| || | |||||||||||||||||| Sbjct: 395 atcccaggaagaacatcttgaagcttcttggtctgtggggagccactgaccacccatgtg 336 Query: 439 tttgcggcgatggacgcttgcactttggggttgaggaactggatgacgaggtcgtccttg 498 |||||||||||||| |||||||||||||| |||| ||||||||||||||| || |||||| Sbjct: 335 tttgcggcgatggaagcttgcactttgggattgacgaactggatgacgagatcatccttg 276 Query: 499 aagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttgagcgtgctc 558 |||||||||||||||||||| || |||||||||||||| || || ||||||||||||||| Sbjct: 275 aagatgttgacctcctcgatcgcggggatggtgttgacacctactctcttgagcgtgctc 216 Query: 559 tgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttccggcggacg 618 ||||||| ||||||||| |||||| |||||||||| || ||||||||||||| ||| ||| Sbjct: 215 tgcagcctcttgtcgtcagtggtccccgtcttgtggacggccttcttcttcctgcgcacg 156 Query: 619 gtgcccttgccgccggtgcggacgg 643 ||||| || |||||||||||||||| Sbjct: 155 gtgcctttcccgccggtgcggacgg 131 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/98 (85%), Gaps = 7/98 (7%) Strand = Plus / Minus Query: 10 taaaaactcaggagaaactaaaagtttccaactgcagcaaatacagaa---ggcctagga 66 ||||||||| ||||||||||||||||||||| |||| |||||| | |||||| || Sbjct: 713 taaaaactc-ggagaaactaaaagtttccaattgca---aatacaaagattggcctacga 658 Query: 67 gagggagcaaaacagggccgtcatagaaaaccatgacc 104 | | ||||||||||||||||||||||||||||||||| Sbjct: 657 ggagaagcaaaacagggccgtcatagaaaaccatgacc 620
>dbj|AK104157.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C10, full insert sequence Length = 903 Score = 442 bits (223), Expect = e-121 Identities = 390/445 (87%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| |||||||| || ||| |||| || ||||| ||||| ||| Sbjct: 552 gatcaggcttttgtctcctgagctacctcttcgaaattctctcccggaacaagctctgga 493 Query: 262 acgtcgtcgtcattctcctccttgggctgga---tggcgcctgcagcagccacctgcttc 318 || || || || ||||| ||||| | |||| |||| ||||||||||| ||||||||| Sbjct: 492 acatcatcatcgttctcttcctttgcctgggcagtggcacctgcagcagctacctgcttc 433 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagggcccaattggttgatg 378 |||||||| || || |||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 432 tgcatctcttcagcaatcctctttaggtgctccatgttgtcaggacccaattggttaatg 373 Query: 379 atagaaggaagaacatcttgtagcttcttggtctggggagtcccactgaccacccatgtg 438 || ||||||||||||||| |||||||||||||| || | |||||||||||||||||| Sbjct: 372 atcccaggaagaacatcttgaagcttcttggtctgtggggagccactgaccacccatgtg 313 Query: 439 tttgcggcgatggacgcttgcactttggggttgaggaactggatgacgaggtcgtccttg 498 |||||||||||||| |||||||||||||| |||| ||||||||||||||| || |||||| Sbjct: 312 tttgcggcgatggaagcttgcactttgggattgacgaactggatgacgagatcatccttg 253 Query: 499 aagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttgagcgtgctc 558 |||||||||||||||||||| || |||||||||||||| || || ||||||||||||||| Sbjct: 252 aagatgttgacctcctcgatcgcggggatggtgttgacacctactctcttgagcgtgctc 193 Query: 559 tgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttccggcggacg 618 ||||||| ||||||||| |||||| |||||||||| || ||||||||||||| ||| ||| Sbjct: 192 tgcagcctcttgtcgtcagtggtccccgtcttgtggacggccttcttcttcctgcgcacg 133 Query: 619 gtgcccttgccgccggtgcggacgg 643 ||||| || |||||||||||||||| Sbjct: 132 gtgcctttcccgccggtgcggacgg 108 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/98 (85%), Gaps = 7/98 (7%) Strand = Plus / Minus Query: 10 taaaaactcaggagaaactaaaagtttccaactgcagcaaatacagaa---ggcctagga 66 ||||||||| ||||||||||||||||||||| |||| |||||| | |||||| || Sbjct: 690 taaaaactc-ggagaaactaaaagtttccaattgca---aatacaaagattggcctacga 635 Query: 67 gagggagcaaaacagggccgtcatagaaaaccatgacc 104 | | ||||||||||||||||||||||||||||||||| Sbjct: 634 ggagaagcaaaacagggccgtcatagaaaaccatgacc 597
>dbj|AK102202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087F19, full insert sequence Length = 804 Score = 442 bits (223), Expect = e-121 Identities = 390/445 (87%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| |||||||| || ||| |||| || ||||| ||||| ||| Sbjct: 568 gatcaggcttttgtctcctgagctacctcttcgaaattctctcccggaacaagctctgga 509 Query: 262 acgtcgtcgtcattctcctccttgggctgga---tggcgcctgcagcagccacctgcttc 318 || || || || ||||| ||||| | |||| |||| ||||||||||| ||||||||| Sbjct: 508 acatcatcatcgttctcttcctttgcctgggcagtggcacctgcagcagctacctgcttc 449 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagggcccaattggttgatg 378 |||||||| || || |||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 448 tgcatctcttcagcaatcctctttaggtgctccatgttgtcaggacccaattggttaatg 389 Query: 379 atagaaggaagaacatcttgtagcttcttggtctggggagtcccactgaccacccatgtg 438 || ||||||||||||||| |||||||||||||| || | |||||||||||||||||| Sbjct: 388 atcccaggaagaacatcttgaagcttcttggtctgtggggagccactgaccacccatgtg 329 Query: 439 tttgcggcgatggacgcttgcactttggggttgaggaactggatgacgaggtcgtccttg 498 |||||||||||||| |||||||||||||| |||| ||||||||||||||| || |||||| Sbjct: 328 tttgcggcgatggaagcttgcactttgggattgacgaactggatgacgagatcatccttg 269 Query: 499 aagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttgagcgtgctc 558 |||||||||||||||||||| || |||||||||||||| || || ||||||||||||||| Sbjct: 268 aagatgttgacctcctcgatcgcggggatggtgttgacacctactctcttgagcgtgctc 209 Query: 559 tgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttccggcggacg 618 ||||||| ||||||||| |||||| |||||||||| || ||||||||||||| ||| ||| Sbjct: 208 tgcagcctcttgtcgtcagtggtccccgtcttgtggacggccttcttcttcctgcgcacg 149 Query: 619 gtgcccttgccgccggtgcggacgg 643 ||||| || |||||||||||||||| Sbjct: 148 gtgcctttcccgccggtgcggacgg 124 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/98 (85%), Gaps = 7/98 (7%) Strand = Plus / Minus Query: 10 taaaaactcaggagaaactaaaagtttccaactgcagcaaatacagaa---ggcctagga 66 ||||||||| ||||||||||||||||||||| |||| |||||| | |||||| || Sbjct: 706 taaaaactc-ggagaaactaaaagtttccaattgca---aatacaaagattggcctacga 651 Query: 67 gagggagcaaaacagggccgtcatagaaaaccatgacc 104 | | ||||||||||||||||||||||||||||||||| Sbjct: 650 ggagaagcaaaacagggccgtcatagaaaaccatgacc 613
>dbj|AK060496.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F11, full insert sequence Length = 944 Score = 442 bits (223), Expect = e-121 Identities = 390/445 (87%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| |||||||| || ||| |||| || ||||| ||||| ||| Sbjct: 593 gatcaggcttttgtctcctgagctacctcttcgaaattctctcccggaacaagctctgga 534 Query: 262 acgtcgtcgtcattctcctccttgggctgga---tggcgcctgcagcagccacctgcttc 318 || || || || ||||| ||||| | |||| |||| ||||||||||| ||||||||| Sbjct: 533 acatcatcatcgttctcttcctttgcctgggcagtggcacctgcagcagctacctgcttc 474 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagggcccaattggttgatg 378 |||||||| || || |||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 473 tgcatctcttcagcaatcctctttaggtgctccatgttgtcaggacccaattggttaatg 414 Query: 379 atagaaggaagaacatcttgtagcttcttggtctggggagtcccactgaccacccatgtg 438 || ||||||||||||||| |||||||||||||| || | |||||||||||||||||| Sbjct: 413 atcccaggaagaacatcttgaagcttcttggtctgtggggagccactgaccacccatgtg 354 Query: 439 tttgcggcgatggacgcttgcactttggggttgaggaactggatgacgaggtcgtccttg 498 |||||||||||||| |||||||||||||| |||| ||||||||||||||| || |||||| Sbjct: 353 tttgcggcgatggaagcttgcactttgggattgacgaactggatgacgagatcatccttg 294 Query: 499 aagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttgagcgtgctc 558 |||||||||||||||||||| || |||||||||||||| || || ||||||||||||||| Sbjct: 293 aagatgttgacctcctcgatcgcggggatggtgttgacacctactctcttgagcgtgctc 234 Query: 559 tgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttccggcggacg 618 ||||||| ||||||||| |||||| |||||||||| || ||||||||||||| ||| ||| Sbjct: 233 tgcagcctcttgtcgtcagtggtccccgtcttgtggacggccttcttcttcctgcgcacg 174 Query: 619 gtgcccttgccgccggtgcggacgg 643 ||||| || |||||||||||||||| Sbjct: 173 gtgcctttcccgccggtgcggacgg 149 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/98 (85%), Gaps = 7/98 (7%) Strand = Plus / Minus Query: 10 taaaaactcaggagaaactaaaagtttccaactgcagcaaatacagaa---ggcctagga 66 ||||||||| ||||||||||||||||||||| |||| |||||| | |||||| || Sbjct: 731 taaaaactc-ggagaaactaaaagtttccaattgca---aatacaaagattggcctacga 676 Query: 67 gagggagcaaaacagggccgtcatagaaaaccatgacc 104 | | ||||||||||||||||||||||||||||||||| Sbjct: 675 ggagaagcaaaacagggccgtcatagaaaaccatgacc 638
>gb|BT016308.1| Zea mays clone Contig141 mRNA sequence Length = 783 Score = 424 bits (214), Expect = e-115 Identities = 389/445 (87%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| ||||| || ||||||||||| |||||||| ||||| ||| Sbjct: 508 gatcaggcttttgtctcctgagctacttcttcaaaagtctctccaggaacaagctctgga 449 Query: 262 acgtcgtcgtcattctcctccttgggctg-gatggcgc--ctgcagcagccacctgcttc 318 || ||||| || || || |||||| ||| | || ||| | |||||||||||||||||| Sbjct: 448 acatcgtcatcgttgtcttccttgacctgtgctgccgcaccggcagcagccacctgcttc 389 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagggcccaattggttgatg 378 |||||||||||||| |||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 388 tgcatctcctcggcaatcctcttcaggtgctccatgttgtcagggccaagctggttaatg 329 Query: 379 atagaaggaagaacatcttgtagcttcttggtctggggagtcccactgaccacccatgtg 438 ||| ||| |||||||| |||||||| || ||||| |||| |||||||||||||||||| Sbjct: 328 ataccagggagaacatcctgtagcttttttgtctgtggagatccactgaccacccatgtg 269 Query: 439 tttgcggcgatggacgcttgcactttggggttgaggaactggatgacgaggtcgtccttg 498 ||||| |||||||| ||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 268 tttgctgcgatggaagcttgcactttggggttcaagaactggatgacgagatcgtccttg 209 Query: 499 aagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttgagcgtgctc 558 || ||||| ||||||||||| || |||||||||||||| || || |||||||| |||| | Sbjct: 208 aatatgttcacctcctcgattgcagggatggtgttgacccctactctcttgagagtgccc 149 Query: 559 tgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttccggcggacg 618 ||||||| ||||||||||||||| |||||||||| || ||||||||||||| ||| | | Sbjct: 148 tgcagcctcttgtcgtccgtggtgaccgtcttgtgtacagccttcttcttcctgcgcatg 89 Query: 619 gtgcccttgccgccggtgcggacgg 643 ||||||||||||||||||||||||| Sbjct: 88 gtgcccttgccgccggtgcggacgg 64 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 ggagaaactaaaagtttccaac 41 |||||||||||||||||||||| Sbjct: 646 ggagaaactaaaagtttccaac 625
>gb|AY105061.1| Zea mays PCO096106 mRNA sequence Length = 902 Score = 416 bits (210), Expect = e-113 Identities = 388/445 (87%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| ||||| || ||||||||||| |||||||| ||||| ||| Sbjct: 626 gatcaggcttttgtctcctgagctacttcttcaaaagtctctccaggaacaagctctgga 567 Query: 262 acgtcgtcgtcattctcctccttgggctg-gatggcgc--ctgcagcagccacctgcttc 318 || ||||| || || || |||||| ||| | || ||| | |||||||||||||||||| Sbjct: 566 acatcgtcatcgttgtcttccttgacctgtgctgccgcaccggcagcagccacctgcttc 507 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagggcccaattggttgatg 378 |||||||||||||| |||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 506 tgcatctcctcggcaatcctcttcaggtgctccatgttgtcagggccaagctggttaatg 447 Query: 379 atagaaggaagaacatcttgtagcttcttggtctggggagtcccactgaccacccatgtg 438 || ||| |||||||| |||||||| || ||||| |||| |||||||||||||||||| Sbjct: 446 atcccagggagaacatcctgtagctttttcgtctgtggagatccactgaccacccatgtg 387 Query: 439 tttgcggcgatggacgcttgcactttggggttgaggaactggatgacgaggtcgtccttg 498 ||||| |||||||| ||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 386 tttgctgcgatggaagcttgcactttggggttcaagaactggatgacgagatcgtccttg 327 Query: 499 aagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttgagcgtgctc 558 || ||||| ||||||||||| || |||||||||||||| || || |||||||| |||| | Sbjct: 326 aatatgttcacctcctcgattgcagggatggtgttgacccctactctcttgagagtgccc 267 Query: 559 tgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttccggcggacg 618 ||||||| ||||||||||||||| |||||||||| || ||||||||||||| ||| | | Sbjct: 266 tgcagcctcttgtcgtccgtggtgaccgtcttgtgtacagccttcttcttcctgcgcatg 207 Query: 619 gtgcccttgccgccggtgcggacgg 643 ||||||||||||||||||||||||| Sbjct: 206 gtgcccttgccgccggtgcggacgg 182 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 ggagaaactaaaagtttccaac 41 |||||||||||||||||||||| Sbjct: 764 ggagaaactaaaagtttccaac 743
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 186 bits (94), Expect = 6e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| |||| ||||||||||||||| || |||||||||||||||||||||||||| | Sbjct: 35518886 ctttgggattgacgaactggatgacgagatcatccttgaagatgttgacctcctcgatcg 35518827 Query: 521 ccgggatggtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtgg 580 | |||||||||||||| || || |||||||||||||||||||||| ||||||||| |||| Sbjct: 35518826 cggggatggtgttgacacctactctcttgagcgtgctctgcagcctcttgtcgtcagtgg 35518767 Query: 581 tcgccgtcttgtgcaccgccttcttcttcc 610 || |||||||||| || ||||||||||||| Sbjct: 35518766 tccccgtcttgtggacggccttcttcttcc 35518737 Score = 115 bits (58), Expect = 2e-22 Identities = 138/164 (84%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| |||||||| || ||| |||| || ||||| ||||| ||| Sbjct: 35520117 gatcaggcttttgtctcctgagctacctcttcgaaattctctcccggaacaagctctgga 35520058 Query: 262 acgtcgtcgtcattctcctccttgggctgga---tggcgcctgcagcagccacctgcttc 318 || || || || ||||| ||||| | |||| |||| ||||||||||| ||||||||| Sbjct: 35520057 acatcatcatcgttctcttcctttgcctgggcagtggcacctgcagcagctacctgcttc 35519998 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagg 362 |||||||| || || |||||||| |||||||||||||||||||| Sbjct: 35519997 tgcatctcttcagcaatcctctttaggtgctccatgttgtcagg 35519954 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 404 tcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcact 462 |||||||||| || | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 35519040 tcttggtctgtggggagccactgaccacccatgtgtttgcggcgatggaagcttgcact 35518982 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/98 (85%), Gaps = 7/98 (7%) Strand = Plus / Minus Query: 10 taaaaactcaggagaaactaaaagtttccaactgcagcaaatacagaa---ggcctagga 66 ||||||||| ||||||||||||||||||||| |||| |||||| | |||||| || Sbjct: 35520255 taaaaactc-ggagaaactaaaagtttccaattgca---aatacaaagattggcctacga 35520200 Query: 67 gagggagcaaaacagggccgtcatagaaaaccatgacc 104 | | ||||||||||||||||||||||||||||||||| Sbjct: 35520199 ggagaagcaaaacagggccgtcatagaaaaccatgacc 35520162 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 364 cccaattggttgatgatagaaggaagaacatcttgtagct 403 ||||||||||| ||||| ||||||||||||||| |||| Sbjct: 35519460 cccaattggttaatgatcccaggaagaacatcttgaagct 35519421 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 616 acggtgcccttgccgccggtgcggacgg 643 |||||||| || |||||||||||||||| Sbjct: 35518631 acggtgcctttcccgccggtgcggacgg 35518604
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 186 bits (94), Expect = 6e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| |||| ||||||||||||||| || |||||||||||||||||||||||||| | Sbjct: 35608958 ctttgggattgacgaactggatgacgagatcatccttgaagatgttgacctcctcgatcg 35608899 Query: 521 ccgggatggtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtgg 580 | |||||||||||||| || || |||||||||||||||||||||| ||||||||| |||| Sbjct: 35608898 cggggatggtgttgacacctactctcttgagcgtgctctgcagcctcttgtcgtcagtgg 35608839 Query: 581 tcgccgtcttgtgcaccgccttcttcttcc 610 || |||||||||| || ||||||||||||| Sbjct: 35608838 tccccgtcttgtggacggccttcttcttcc 35608809 Score = 115 bits (58), Expect = 2e-22 Identities = 138/164 (84%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| |||||||| || ||| |||| || ||||| ||||| ||| Sbjct: 35610189 gatcaggcttttgtctcctgagctacctcttcgaaattctctcccggaacaagctctgga 35610130 Query: 262 acgtcgtcgtcattctcctccttgggctgga---tggcgcctgcagcagccacctgcttc 318 || || || || ||||| ||||| | |||| |||| ||||||||||| ||||||||| Sbjct: 35610129 acatcatcatcgttctcttcctttgcctgggcagtggcacctgcagcagctacctgcttc 35610070 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagg 362 |||||||| || || |||||||| |||||||||||||||||||| Sbjct: 35610069 tgcatctcttcagcaatcctctttaggtgctccatgttgtcagg 35610026 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 404 tcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcact 462 |||||||||| || | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 35609112 tcttggtctgtggggagccactgaccacccatgtgtttgcggcgatggaagcttgcact 35609054 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/98 (85%), Gaps = 7/98 (7%) Strand = Plus / Minus Query: 10 taaaaactcaggagaaactaaaagtttccaactgcagcaaatacagaa---ggcctagga 66 ||||||||| ||||||||||||||||||||| |||| |||||| | |||||| || Sbjct: 35610327 taaaaactc-ggagaaactaaaagtttccaattgca---aatacaaagattggcctacga 35610272 Query: 67 gagggagcaaaacagggccgtcatagaaaaccatgacc 104 | | ||||||||||||||||||||||||||||||||| Sbjct: 35610271 ggagaagcaaaacagggccgtcatagaaaaccatgacc 35610234 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 364 cccaattggttgatgatagaaggaagaacatcttgtagct 403 ||||||||||| ||||| ||||||||||||||| |||| Sbjct: 35609532 cccaattggttaatgatcccaggaagaacatcttgaagct 35609493 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 616 acggtgcccttgccgccggtgcggacgg 643 |||||||| || |||||||||||||||| Sbjct: 35608703 acggtgcctttcccgccggtgcggacgg 35608676
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 186 bits (94), Expect = 6e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| |||| ||||||||||||||| || |||||||||||||||||||||||||| | Sbjct: 51849 ctttgggattgacgaactggatgacgagatcatccttgaagatgttgacctcctcgatcg 51790 Query: 521 ccgggatggtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtgg 580 | |||||||||||||| || || |||||||||||||||||||||| ||||||||| |||| Sbjct: 51789 cggggatggtgttgacacctactctcttgagcgtgctctgcagcctcttgtcgtcagtgg 51730 Query: 581 tcgccgtcttgtgcaccgccttcttcttcc 610 || |||||||||| || ||||||||||||| Sbjct: 51729 tccccgtcttgtggacggccttcttcttcc 51700 Score = 115 bits (58), Expect = 2e-22 Identities = 138/164 (84%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 202 gatcaggctttcgtctcctgggctacctcctcaaaagtctccccaggaacgagctccgga 261 ||||||||||| |||||||| |||||||| || ||| |||| || ||||| ||||| ||| Sbjct: 53080 gatcaggcttttgtctcctgagctacctcttcgaaattctctcccggaacaagctctgga 53021 Query: 262 acgtcgtcgtcattctcctccttgggctgga---tggcgcctgcagcagccacctgcttc 318 || || || || ||||| ||||| | |||| |||| ||||||||||| ||||||||| Sbjct: 53020 acatcatcatcgttctcttcctttgcctgggcagtggcacctgcagcagctacctgcttc 52961 Query: 319 tgcatctcctcggcgatcctcttcaggtgctccatgttgtcagg 362 |||||||| || || |||||||| |||||||||||||||||||| Sbjct: 52960 tgcatctcttcagcaatcctctttaggtgctccatgttgtcagg 52917 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 404 tcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcact 462 |||||||||| || | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 52003 tcttggtctgtggggagccactgaccacccatgtgtttgcggcgatggaagcttgcact 51945 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/98 (85%), Gaps = 7/98 (7%) Strand = Plus / Minus Query: 10 taaaaactcaggagaaactaaaagtttccaactgcagcaaatacagaa---ggcctagga 66 ||||||||| ||||||||||||||||||||| |||| |||||| | |||||| || Sbjct: 53218 taaaaactc-ggagaaactaaaagtttccaattgca---aatacaaagattggcctacga 53163 Query: 67 gagggagcaaaacagggccgtcatagaaaaccatgacc 104 | | ||||||||||||||||||||||||||||||||| Sbjct: 53162 ggagaagcaaaacagggccgtcatagaaaaccatgacc 53125 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 364 cccaattggttgatgatagaaggaagaacatcttgtagct 403 ||||||||||| ||||| ||||||||||||||| |||| Sbjct: 52423 cccaattggttaatgatcccaggaagaacatcttgaagct 52384 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 616 acggtgcccttgccgccggtgcggacgg 643 |||||||| || |||||||||||||||| Sbjct: 51594 acggtgcctttcccgccggtgcggacgg 51567
>gb|AY103817.1| Zea mays PCO108140 mRNA sequence Length = 904 Score = 101 bits (51), Expect = 3e-18 Identities = 219/275 (79%) Strand = Plus / Minus Query: 336 cctcttcaggtgctccatgttgtcagggcccaattggttgatgatagaaggaagaacatc 395 |||||| |||| ||||| ||| |||||||||| ||||||||| || | || |||| || Sbjct: 436 cctcttgaggttctccaggttatcagggcccagttggttgataattgttggcagaaggtc 377 Query: 396 ttgtagcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgc 455 |||||| | || |||||||| |||||||| |||||||| ||||| | ||||| || Sbjct: 376 ttgtagactttttgtctggggtactccactgactacccatgtatttgcaggaatggatgc 317 Query: 456 ttgcactttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctc 515 ||||||||| ||||| |||| ||||| || | || ||||||||||||||||||||||| Sbjct: 316 ttgcactttagggttctggaattggataacaatatcatccttgaagatgttgacctcctc 257 Query: 516 gatggccgggatggtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtc 575 || | || || ||||| || || | || || | ||||||||| ||||||||||| || Sbjct: 256 aataccaggaatagtgttcactccaattcttttcaacgtgctctgaagccgcttgtcatc 197 Query: 576 cgtggtcgccgtcttgtgcaccgccttcttcttcc 610 ||||| || |||||||| || ||||||||||||| Sbjct: 196 ggtggttgcggtcttgtggactgccttcttcttcc 162
>ref|XM_468566.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1848 Score = 85.7 bits (43), Expect = 2e-13 Identities = 232/295 (78%) Strand = Plus / Minus Query: 349 tccatgttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttg 408 |||| ||| ||||| ||||| ||||||||||| | ||||| | |||||| |||||||| Sbjct: 1649 tccaggttatcaggtcccaactggttgatgattgttggaagcagatcttgcagcttcttc 1590 Query: 409 gtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttgggg 468 ||||| || || ||||| || |||||||| ||||| | ||||| ||||||||||| || Sbjct: 1589 gtctgtggtgttccactcactacccatgtatttgcaccaatggatgcttgcacttttgga 1530 Query: 469 ttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatg 528 || | || ||||| || | || ||||||||||| |||||||| ||||| | || ||| Sbjct: 1529 ttctgaaattggataaccacatcatccttgaagatattgacctcttcgataccaggaatg 1470 Query: 529 gtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtc 588 |||| || || || || || | ||||| || |||| |||||| || ||||| | ||| Sbjct: 1469 ttgttcactcctactcttttcaaggtgctttgaagcctcttgtcatcagtggtggtagtc 1410 Query: 589 ttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcggacgg 643 ||||| || ||||||||||||| ||| | | |||||||||| |||||||| |||| Sbjct: 1409 ttgtgaactgccttcttcttcctgcgcatgctgcccttgccaccggtgcgcacgg 1355
>gb|AY224525.1| Oryza sativa (japonica cultivar-group) isolate 20946 putative transcription factor BTF3 mRNA, complete cds Length = 528 Score = 85.7 bits (43), Expect = 2e-13 Identities = 232/295 (78%) Strand = Plus / Minus Query: 349 tccatgttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttg 408 |||| ||| ||||| ||||| ||||||||||| | ||||| | |||||| |||||||| Sbjct: 329 tccaggttatcaggtcccaactggttgatgattgttggaagcagatcttgcagcttcttc 270 Query: 409 gtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttgggg 468 ||||| || || ||||| || |||||||| ||||| | ||||| ||||||||||| || Sbjct: 269 gtctgtggtgttccactcactacccatgtatttgcaccaatggatgcttgcacttttgga 210 Query: 469 ttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatg 528 || | || ||||| || | || ||||||||||| |||||||| ||||| | || ||| Sbjct: 209 ttctgaaattggataaccacatcatccttgaagatattgacctcttcgataccaggaatg 150 Query: 529 gtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtc 588 |||| || || || || || | ||||| || |||| |||||| || ||||| | ||| Sbjct: 149 ttgttcactcctactcttttcaaggtgctttgaagcctcttgtcatcagtggtggtagtc 90 Query: 589 ttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcggacgg 643 ||||| || ||||||||||||| ||| | | |||||||||| |||||||| |||| Sbjct: 89 ttgtgaactgccttcttcttcctgcgcatgctgcccttgccaccggtgcgcacgg 35
>dbj|AK121478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H07, full insert sequence Length = 871 Score = 85.7 bits (43), Expect = 2e-13 Identities = 232/295 (78%) Strand = Plus / Minus Query: 349 tccatgttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttg 408 |||| ||| ||||| ||||| ||||||||||| | ||||| | |||||| |||||||| Sbjct: 468 tccaggttatcaggtcccaactggttgatgattgttggaagcagatcttgcagcttcttc 409 Query: 409 gtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttgggg 468 ||||| || || ||||| || |||||||| ||||| | ||||| ||||||||||| || Sbjct: 408 gtctgtggtgttccactcactacccatgtatttgcaccaatggatgcttgcacttttgga 349 Query: 469 ttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatg 528 || | || ||||| || | || ||||||||||| |||||||| ||||| | || ||| Sbjct: 348 ttctgaaattggataaccacatcatccttgaagatattgacctcttcgataccaggaatg 289 Query: 529 gtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtc 588 |||| || || || || || | ||||| || |||| |||||| || ||||| | ||| Sbjct: 288 ttgttcactcctactcttttcaaggtgctttgaagcctcttgtcatcagtggtggtagtc 229 Query: 589 ttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcggacgg 643 ||||| || ||||||||||||| ||| | | |||||||||| |||||||| |||| Sbjct: 228 ttgtgaactgccttcttcttcctgcgcatgctgcccttgccaccggtgcgcacgg 174
>ref|NM_134688.1| Drosophila melanogaster CG11835-RA (CG11835), mRNA Length = 2388 Score = 79.8 bits (40), Expect = 1e-11 Identities = 118/144 (81%) Strand = Plus / Minus Query: 490 tcgtccttgaagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttg 549 |||||||||| ||||| |||||||||||| ||||||||||| | || || | ||||| Sbjct: 188 tcgtccttgattatgttaacctcctcgatgcccgggatggtgctcaccgacagcttcttg 129 Query: 550 agcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttc 609 |||| |||||||||| |||||| || |||| |||||||| ||||| |||||||||| Sbjct: 128 agcgagctctgcagcttcttgtcatcggtggccgccgtctggtgcatgaccttcttcttt 69 Query: 610 cggcggacggtgcccttgccgccg 633 || ||| ||||||||||||||| Sbjct: 68 cgacggggcgtgcccttgccgccg 45
>gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome 2L, region 21D-21E, BAC clone BACR48E08, complete sequence Length = 182726 Score = 79.8 bits (40), Expect = 1e-11 Identities = 118/144 (81%) Strand = Plus / Minus Query: 490 tcgtccttgaagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttg 549 |||||||||| ||||| |||||||||||| ||||||||||| | || || | ||||| Sbjct: 94313 tcgtccttgattatgttaacctcctcgatgcccgggatggtgctcaccgacagcttcttg 94254 Query: 550 agcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttc 609 |||| |||||||||| |||||| || |||| |||||||| ||||| |||||||||| Sbjct: 94253 agcgagctctgcagcttcttgtcatcggtggccgccgtctggtgcatgaccttcttcttt 94194 Query: 610 cggcggacggtgcccttgccgccg 633 || ||| ||||||||||||||| Sbjct: 94193 cgacggggcgtgcccttgccgccg 94170
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 79.8 bits (40), Expect = 1e-11 Identities = 118/144 (81%) Strand = Plus / Plus Query: 490 tcgtccttgaagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttg 549 |||||||||| ||||| |||||||||||| ||||||||||| | || || | ||||| Sbjct: 257154 tcgtccttgattatgttaacctcctcgatgcccgggatggtgctcaccgacagcttcttg 257213 Query: 550 agcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttc 609 |||| |||||||||| |||||| || |||| |||||||| ||||| |||||||||| Sbjct: 257214 agcgagctctgcagcttcttgtcatcggtggccgccgtctggtgcatgaccttcttcttt 257273 Query: 610 cggcggacggtgcccttgccgccg 633 || ||| ||||||||||||||| Sbjct: 257274 cgacggggcgtgcccttgccgccg 257297
>gb|AC004573.1|AC004573 Drosophila melanogaster, chromosome 2L, region 21C5-21D1, P1 clone DS07610, complete sequence Length = 85095 Score = 79.8 bits (40), Expect = 1e-11 Identities = 118/144 (81%) Strand = Plus / Plus Query: 490 tcgtccttgaagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttg 549 |||||||||| ||||| |||||||||||| ||||||||||| | || || | ||||| Sbjct: 22584 tcgtccttgattatgttaacctcctcgatgcccgggatggtgctcaccgacagcttcttg 22643 Query: 550 agcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttcttc 609 |||| |||||||||| |||||| || |||| |||||||| ||||| |||||||||| Sbjct: 22644 agcgagctctgcagcttcttgtcatcggtggccgccgtctggtgcatgaccttcttcttt 22703 Query: 610 cggcggacggtgcccttgccgccg 633 || ||| ||||||||||||||| Sbjct: 22704 cgacggggcgtgcccttgccgccg 22727
>gb|DQ241859.1| Solanum tuberosum clone 021D03 putative transcription factor BTF3-like mRNA, complete cds Length = 676 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 403 ttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcact 462 ||||| ||||||||||| ||||| || |||||||||||||| || || || ||||| ||| Sbjct: 304 ttctttgtctggggagtaccactaacaacccatgtgtttgcagcaattgatgcttgaact 245 Query: 463 ttggggttgaggaactggatgacgaggtcgtccttgaagatgttgac 509 |||||||| | ||| ||||| || | || ||||||||||||||||| Sbjct: 244 ttggggttaacgaattggataacaacatcctccttgaagatgttgac 198
>gb|BT017723.1| Zea mays clone EL01N0447D03.c mRNA sequence Length = 1077 Score = 73.8 bits (37), Expect = 6e-10 Identities = 202/257 (78%) Strand = Plus / Minus Query: 354 gttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttggtctg 413 |||||||||||| | |||||||| || || ||||| | |||||| |||||||| ||||| Sbjct: 572 gttgtcagggccgagctggttgataatggacggaagcagatcttgcagcttctttgtctg 513 Query: 414 gggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttggggttgag 473 ||||| ||||||||||||||||| || || | || || ||||||||||| || || | Sbjct: 512 tggagttccactgaccacccatgtattagcaccaattgaagcttgcactttaggattcac 453 Query: 474 gaactggatgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatggtgtt 533 ||||| || || | || ||||| |||||||||||||| || || | || |||||||| Sbjct: 452 aaactgaataacaacatcatccttaaagatgttgacctcttcaataccaggaatggtgtt 393 Query: 534 gacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtg 593 || || | || || || |||||||| |||| || || || ||||||| |||||||| Sbjct: 392 cactcctattcttttcagggtgctctgaagccttttatcatctgtggtcgtagtcttgtg 333 Query: 594 caccgccttcttcttcc 610 || ||||||||||||| Sbjct: 332 gactgccttcttcttcc 316
>gb|AY108350.1| Zea mays PCO126681 mRNA sequence Length = 951 Score = 73.8 bits (37), Expect = 6e-10 Identities = 202/257 (78%) Strand = Plus / Minus Query: 354 gttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttggtctg 413 |||||||||||| | |||||||| || || ||||| | |||||| |||||||| ||||| Sbjct: 451 gttgtcagggccgagctggttgataatggacggaagcagatcttgcagcttctttgtctg 392 Query: 414 gggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttggggttgag 473 ||||| ||||||||||||||||| || || | || || ||||||||||| || || | Sbjct: 391 tggagttccactgaccacccatgtattagcaccaattgaagcttgcactttaggattcac 332 Query: 474 gaactggatgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatggtgtt 533 ||||| || || | || ||||| |||||||||||||| || || | || |||||||| Sbjct: 331 aaactgaataacaacatcatccttaaagatgttgacctcttcaataccaggaatggtgtt 272 Query: 534 gacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtg 593 || || | || || || |||||||| |||| || || || ||||||| |||||||| Sbjct: 271 cactcctattcttttcagggtgctctgaagccttttatcatctgtggtcgtagtcttgtg 212 Query: 594 caccgccttcttcttcc 610 || ||||||||||||| Sbjct: 211 gactgccttcttcttcc 195
>gb|BT017386.1| Zea mays clone EL01N0327A01.c mRNA sequence Length = 896 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 349 tccatgttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttg 408 |||| ||||||||| || | |||||||| || || ||||| | |||||| |||||||| Sbjct: 442 tccaggttgtcaggaccaagctggttgataatcgacggaagcagatcttgcagcttcttt 383 Query: 409 gtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcacttt 464 ||||| ||||| ||||||||||||||||| || || | || |||||||||||||| Sbjct: 382 gtctgtggagttccactgaccacccatgtattagcaccaattgacgcttgcacttt 327
>gb|BT013353.1| Lycopersicon esculentum clone 135313R, mRNA sequence Length = 701 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 358 tcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttggtctgggga 417 ||||||||||| |||| ||||| |||||||| ||| || | ||||| ||||||||| Sbjct: 374 tcagggcccaactggtgaatgatctgaggaagaatatcctgcaatttctttgtctgggga 315 Query: 418 gtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttggggttgaggaac 477 || ||||| || |||||||||||||| || || || ||||| ||||||||||| | ||| Sbjct: 314 gtaccactaacaacccatgtgtttgcagcaattgatgcttgaactttggggttaacgaat 255 Query: 478 tggatgacgaggtcgtccttgaagatgttgac 509 ||||| || | || |||||||| |||||||| Sbjct: 254 tggataacaacatcctccttgaaaatgttgac 223
>gb|AY104643.1| Zea mays PCO126682 mRNA sequence Length = 901 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 349 tccatgttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttg 408 |||| ||||||||| || | |||||||| || || ||||| | |||||| |||||||| Sbjct: 441 tccaggttgtcaggaccaagctggttgataatcgacggaagcagatcttgcagcttcttt 382 Query: 409 gtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcacttt 464 ||||| ||||| ||||||||||||||||| || || | || |||||||||||||| Sbjct: 381 gtctgtggagttccactgaccacccatgtattagcaccaattgacgcttgcacttt 326
>gb|DQ307490.1| Lycopersicon esculentum BTF3-like transcription factor (BTF3) mRNA, complete cds Length = 711 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 358 tcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttggtctgggga 417 ||||||||||| |||| ||||| |||||||| ||| || | ||||| ||||||||| Sbjct: 383 tcagggcccaactggtgaatgatctgaggaagaatatcctgcaatttctttgtctgggga 324 Query: 418 gtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttggggttgaggaac 477 || ||||| || |||||||||||||| || || || ||||| ||||||||||| | ||| Sbjct: 323 gtaccactaacaacccatgtgtttgcagcaattgatgcttgaactttggggttaacgaat 264 Query: 478 tggatgacgaggtcgtccttgaagatgttgac 509 ||||| || | || |||||||| |||||||| Sbjct: 263 tggataacaacatcctccttgaaaatgttgac 232
>dbj|AK061661.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E03, full insert sequence Length = 648 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 349 tccatgttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttg 408 |||| ||| ||||| ||||| ||||||||||| | ||||| | |||||| |||||||| Sbjct: 252 tccaggttatcaggtcccaactggttgatgattgttggaagcagatcttgcagcttcttc 193 Query: 409 gtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttgggg 468 ||||| || || ||||| || |||||||| ||||| | ||||| ||||||||||| || Sbjct: 192 gtctgtggtgttccactcactacccatgtatttgcaccaatggatgcttgcacttttgga 133 Query: 469 ttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgat 518 || | || ||||| || | || ||||||||||| |||||||| ||||| Sbjct: 132 ttctgaaattggataaccacatcatccttgaagatattgacctcttcgat 83
>ref|XM_742709.1| Aspergillus fumigatus Af293 nascent polypeptide-associated complex subunit (Afu6g02750) partial mRNA Length = 561 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 493 tccttgaagatgttgacctcctcgatggccgggatgg 529 |||||||| ||||||||||||||||||||| |||||| Sbjct: 281 tccttgaacatgttgacctcctcgatggcctggatgg 245
>emb|AJ580824.1|LCO580824 Lotus corniculatus var. japonicus har1 gene and genes for transcription factor homolog BTF3-like protein, S-receptor kinase-like protein 1, S-receptor kinase-like protein 2, S-receptor kinase-like protein 3 and SAR DNA-binding protein-like protein Length = 46304 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 |||||||||| || |||||||| || | || ||||||||||||||||||||||| || | Sbjct: 6721 ctttggggtttagaaactggataactacatcatccttgaagatgttgacctcctcaattg 6662 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 6661 cggggatgg 6653 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 231 ctcaaaagtctccccaggaacgagctccggaacgtcgtcgtcattctcctc 281 ||||||||||||||| ||||| ||||| || ||||| || ||||||||||| Sbjct: 7621 ctcaaaagtctcccctggaacaagctctgggacgtcatcatcattctcctc 7571
>dbj|AB225627.1| Aspergillus oryzae cDNA, contig sequence: AoEST2482 Length = 609 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 493 tccttgaagatgttgacctcctcgatggccgggatgg 529 |||||||| ||||||||||||||||||||| |||||| Sbjct: 234 tccttgaacatgttgacctcctcgatggcctggatgg 198
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 493 tccttgaagatgttgacctcctcgatggccgggatgg 529 |||||||| ||||||||||||||||||||| |||||| Sbjct: 421528 tccttgaacatgttgacctcctcgatggcctggatgg 421564
>dbj|AP005667.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258c, complete sequence Length = 38809 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 |||||||||| || |||||||| || | || ||||||||||||||||||||||| || | Sbjct: 8507 ctttggggtttagaaactggataactacatcatccttgaagatgttgacctcctcaattg 8448 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 8447 cggggatgg 8439 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 231 ctcaaaagtctccccaggaacgagctccggaacgtcgtcgtcattctcctc 281 ||||||||||||||| ||||| ||||| || ||||| || ||||||||||| Sbjct: 9407 ctcaaaagtctcccctggaacaagctctgggacgtcatcatcattctcctc 9357
>dbj|AB092809.1| Lotus japonicus HAR1 gene for LRR receptor-like kinase, hypothetical proteins, complete and partial cds, clone:BAC259.12D-2 Length = 39462 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 |||||||||| || |||||||| || | || ||||||||||||||||||||||| || | Sbjct: 8408 ctttggggtttagaaactggataactacatcatccttgaagatgttgacctcctcaattg 8349 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 8348 cggggatgg 8340 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 231 ctcaaaagtctccccaggaacgagctccggaacgtcgtcgtcattctcctc 281 ||||||||||||||| ||||| ||||| || ||||| || ||||||||||| Sbjct: 9308 ctcaaaagtctcccctggaacaagctctgggacgtcatcatcattctcctc 9258
>ref|NM_197052.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBa0012L23.32), mRNA Length = 785 Score = 52.0 bits (26), Expect = 0.002 Identities = 224/290 (77%) Strand = Plus / Minus Query: 349 tccatgttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttg 408 |||| ||||||||| || | ||||||||| || || || || | ||| || |||||||| Sbjct: 438 tccaagttgtcaggaccaagttggttgataattgatggcagcagatcctgcagcttcttt 379 Query: 409 gtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttgggg 468 || || ||||| |||||||| |||||||| || || | || || ||||||||||| || Sbjct: 378 gtttgtggagttccactgacaacccatgtattagcaccaattgaagcttgcactttagga 319 Query: 469 ttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatg 528 || || ||||| || || | || |||||||| ||||| ||||| || ||| | |||||| Sbjct: 318 ttcagaaactgaataaccacatcatccttgaaaatgttaacctcttcaatgccagggatg 259 Query: 529 gtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtc 588 ||||| || || || || || || |||||||| || | ||||| || ||||| | ||| Sbjct: 258 gtgtttactcctactcttttcagagtgctctgaagtcttttgtcatctgtggttgtagtc 199 Query: 589 ttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcg 638 || || || ||||||||||| | ||| ||| | ||||| || |||||||| Sbjct: 198 ttatggactgccttcttctttctgcgcacgctacccttccccccggtgcg 149
>ref|XM_676923.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8746.2), mRNA Length = 498 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 493 tccttgaagatgttgacctcctcgatggcc 522 |||||||| ||||||||||||||||||||| Sbjct: 185 tccttgaacatgttgacctcctcgatggcc 156
>gb|AY084522.1| Arabidopsis thaliana clone 1105 mRNA, complete sequence Length = 604 Score = 52.0 bits (26), Expect = 0.002 Identities = 236/306 (77%) Strand = Plus / Minus Query: 338 tcttcaggtgctccatgttgtcagggcccaattggttgatgatagaaggaagaacatctt 397 ||||||||| ||||||||||| || || | |||| ||||||| |||||| | ||||| Sbjct: 428 tcttcaggttgtccatgttgtctggtccaagttggctgatgatctgaggaaggatatctt 369 Query: 398 gtagcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgctt 457 | | || |||||||| |||| || || || |||||||||||||| || || || |||| Sbjct: 368 gcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattgaagctt 309 Query: 458 gcactttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcga 517 | || || ||||||| |||||| || || | || ||||| |||||||| || || || | Sbjct: 308 gaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttcttcaa 249 Query: 518 tggccgggatggtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccg 577 | || || |||| ||| || || | ||||| || |||||||| |||| |||||| || | Sbjct: 248 tagcgggaatggagttaactccaattctcttaagtgtgctctggagcctcttgtcatcag 189 Query: 578 tggtcgccgtcttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgc 637 | || ||||||||||| ||||||||||| | | ||| || ||||| ||||| |||| Sbjct: 188 ttgtattggtcttgtgcacagccttcttctttcttctgactgtaccctttccgccagtgc 129 Query: 638 ggacgg 643 |||||| Sbjct: 128 ggacgg 123
>dbj|AK121674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068E07, full insert sequence Length = 756 Score = 52.0 bits (26), Expect = 0.002 Identities = 224/290 (77%) Strand = Plus / Minus Query: 349 tccatgttgtcagggcccaattggttgatgatagaaggaagaacatcttgtagcttcttg 408 |||| ||||||||| || | ||||||||| || || || || | ||| || |||||||| Sbjct: 409 tccaagttgtcaggaccaagttggttgataattgatggcagcagatcctgcagcttcttt 350 Query: 409 gtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcactttgggg 468 || || ||||| |||||||| |||||||| || || | || || ||||||||||| || Sbjct: 349 gtttgtggagttccactgacaacccatgtattagcaccaattgaagcttgcactttagga 290 Query: 469 ttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatg 528 || || ||||| || || | || |||||||| ||||| ||||| || ||| | |||||| Sbjct: 289 ttcagaaactgaataaccacatcatccttgaaaatgttaacctcttcaatgccagggatg 230 Query: 529 gtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtc 588 ||||| || || || || || || |||||||| || | ||||| || ||||| | ||| Sbjct: 229 gtgtttactcctactcttttcagagtgctctgaagtcttttgtcatctgtggttgtagtc 170 Query: 589 ttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcg 638 || || || ||||||||||| | ||| ||| | ||||| || |||||||| Sbjct: 169 ttatggactgccttcttctttctgcgcacgctacccttccccccggtgcg 120
>emb|AJ242970.1|ATH242970 Arabidopsis thaliana mRNA for BTF3b-like factor Length = 630 Score = 52.0 bits (26), Expect = 0.002 Identities = 236/306 (77%) Strand = Plus / Minus Query: 338 tcttcaggtgctccatgttgtcagggcccaattggttgatgatagaaggaagaacatctt 397 ||||||||| ||||||||||| || || | |||| ||||||| |||||| | ||||| Sbjct: 394 tcttcaggttgtccatgttgtctggtccaagttggctgatgatctgaggaaggatatctt 335 Query: 398 gtagcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgctt 457 | | || |||||||| |||| || || || |||||||||||||| || || || |||| Sbjct: 334 gcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattgaagctt 275 Query: 458 gcactttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcga 517 | || || ||||||| |||||| || || | || ||||| |||||||| || || || | Sbjct: 274 gaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttcttcaa 215 Query: 518 tggccgggatggtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccg 577 | || || |||| ||| || || | ||||| || |||||||| |||| |||||| || | Sbjct: 214 tagcgggaatggagttaactccaattctcttaagtgtgctctggagcctcttgtcatcag 155 Query: 578 tggtcgccgtcttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgc 637 | || ||||||||||| ||||||||||| | | ||| || ||||| ||||| |||| Sbjct: 154 ttgtattggtcttgtgcacagccttcttctttcttctgactgtaccctttccgccagtgc 95 Query: 638 ggacgg 643 |||||| Sbjct: 94 ggacgg 89
>gb|DQ205676.1| Glycine canescens BTF3-like protein 2B gene, partial sequence Length = 741 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| |||||||||||||| | Sbjct: 112 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcgatag 53 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 52 cagggatgg 44
>gb|DQ205674.1| Glycine canescens BTF3-like protein 2A gene, partial sequence Length = 948 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| |||||||||||||| | Sbjct: 112 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcgatag 53 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 52 cagggatgg 44 Score = 40.1 bits (20), Expect = 8.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 263 cgtcgtcgtcattctcctccttgggctg 290 |||||||||||||||||| ||||||||| Sbjct: 900 cgtcgtcgtcattctcct-cttgggctg 874
>gb|DQ205670.1| Glycine soja clone 2 BTF3-like protein 2A gene, partial sequence Length = 868 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| ||||||||||| || | Sbjct: 72 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 13 Query: 521 ccgggatgg 529 ||||||||| Sbjct: 12 ccgggatgg 4
>gb|DQ205669.1| Glycine soja BTF3-like protein 2B gene, partial sequence Length = 1065 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| ||||||||||| || | Sbjct: 455 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 396 Query: 521 ccgggatgg 529 ||||||||| Sbjct: 395 ccgggatgg 387
>gb|DQ205668.1| Glycine soja BTF3-like protein 1 gene, partial sequence Length = 879 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| ||||||||||| || | Sbjct: 71 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 12 Query: 521 ccgggatgg 529 ||||||||| Sbjct: 11 ccgggatgg 3
>ref|NM_105982.1| Arabidopsis thaliana unknown protein AT1G73230 mRNA, complete cds Length = 819 Score = 48.1 bits (24), Expect = 0.036 Identities = 147/188 (78%) Strand = Plus / Minus Query: 421 ccactgaccacccatgtgtttgcggcgatggacgcttgcactttggggttgaggaactgg 480 ||||| || ||||||||||| || || || || ||||| ||||| ||||| | |||||| Sbjct: 380 ccactcacaacccatgtgttagcagcaattgaagcttgaactttagggttaatgaactga 321 Query: 481 atgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatggtgttgacgccc 540 ||||| | || ||||| || ||||| || || || ||||| || |||| ||||| || Sbjct: 320 atgactacatcatccttaaaaatgttaacttcttcaatggcgggaatggaattgactcca 261 Query: 541 accctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgcc 600 || ||||| || |||||||| |||| |||||| || || || | |||||||| || ||| Sbjct: 260 actctcttaagagtgctctggagcctcttgtcatcggttgtagtggtcttgtgaacagcc 201 Query: 601 ttcttctt 608 |||||||| Sbjct: 200 ttcttctt 193
>gb|DQ205667.1| Amphicarpaea bracteata BTF3-like protein gene, partial sequence Length = 1065 Score = 48.1 bits (24), Expect = 0.036 Identities = 93/116 (80%) Strand = Plus / Minus Query: 493 tccttgaagatgttgacctcctcgatggccgggatggtgttgacgcccaccctcttgagc 552 ||||| ||||| ||||||||||| || || ||||||| || || || | ||||| || Sbjct: 394 tccttaaagatattgacctcctcaattgcagggatggcattcacccctattctcttcagg 335 Query: 553 gtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgccttcttctt 608 |||||||| |||| ||||| || ||||| | ||||||||| || ||||||||||| Sbjct: 334 gtgctctgaagccttttgtcatctgtggttgtcgtcttgtggacagccttcttctt 279
>gb|AY063069.1| Arabidopsis thaliana putative RNA polymerase B transcription factor 3 (At1g73230) mRNA, complete cds Length = 529 Score = 48.1 bits (24), Expect = 0.036 Identities = 147/188 (78%) Strand = Plus / Minus Query: 421 ccactgaccacccatgtgtttgcggcgatggacgcttgcactttggggttgaggaactgg 480 ||||| || ||||||||||| || || || || ||||| ||||| ||||| | |||||| Sbjct: 257 ccactcacaacccatgtgttagcagcaattgaagcttgaactttagggttaatgaactga 198 Query: 481 atgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatggtgttgacgccc 540 ||||| | || ||||| || ||||| || || || ||||| || |||| ||||| || Sbjct: 197 atgactacatcatccttaaaaatgttaacttcttcaatggcgggaatggaattgactcca 138 Query: 541 accctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgcc 600 || ||||| || |||||||| |||| |||||| || || || | |||||||| || ||| Sbjct: 137 actctcttaagagtgctctggagcctcttgtcatcggttgtagtggtcttgtgaacagcc 78 Query: 601 ttcttctt 608 |||||||| Sbjct: 77 ttcttctt 70
>gb|AF370253.1| Arabidopsis thaliana putative RNA polymerase B transcription factor BTF3 (At1g73230) mRNA, complete cds Length = 875 Score = 48.1 bits (24), Expect = 0.036 Identities = 147/188 (78%) Strand = Plus / Minus Query: 421 ccactgaccacccatgtgtttgcggcgatggacgcttgcactttggggttgaggaactgg 480 ||||| || ||||||||||| || || || || ||||| ||||| ||||| | |||||| Sbjct: 343 ccactcacaacccatgtgttagcagcaattgaagcttgaactttagggttaatgaactga 284 Query: 481 atgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatggtgttgacgccc 540 ||||| | || ||||| || ||||| || || || ||||| || |||| ||||| || Sbjct: 283 atgactacatcatccttaaaaatgttaacttcttcaatggcgggaatggaattgactcca 224 Query: 541 accctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgcc 600 || ||||| || |||||||| |||| |||||| || || || | |||||||| || ||| Sbjct: 223 actctcttaagagtgctctggagcctcttgtcatcggttgtagtggtcttgtgaacagcc 164 Query: 601 ttcttctt 608 |||||||| Sbjct: 163 ttcttctt 156
>gb|AY084841.1| Arabidopsis thaliana clone 119220 mRNA, complete sequence Length = 819 Score = 48.1 bits (24), Expect = 0.036 Identities = 147/188 (78%) Strand = Plus / Minus Query: 421 ccactgaccacccatgtgtttgcggcgatggacgcttgcactttggggttgaggaactgg 480 ||||| || ||||||||||| || || || || ||||| ||||| ||||| | |||||| Sbjct: 380 ccactcacaacccatgtgttagcagcaattgaagcttgaactttagggttaatgaactga 321 Query: 481 atgacgaggtcgtccttgaagatgttgacctcctcgatggccgggatggtgttgacgccc 540 ||||| | || ||||| || ||||| || || || ||||| || |||| ||||| || Sbjct: 320 atgactacatcatccttaaaaatgttaacttcttcaatggcgggaatggaattgactcca 261 Query: 541 accctcttgagcgtgctctgcagccgcttgtcgtccgtggtcgccgtcttgtgcaccgcc 600 || ||||| || |||||||| |||| |||||| || || || | |||||||| || ||| Sbjct: 260 actctcttaagagtgctctggagcctcttgtcatcggttgtagtggtcttgtgaacagcc 201 Query: 601 ttcttctt 608 |||||||| Sbjct: 200 ttcttctt 193
>ref|XM_959104.1| Neurospora crassa OR74A hypothetical protein (NCU03148.1) partial mRNA Length = 456 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 495 cttgaagatgttgacctcctcgatggccgggatgg 529 |||||| ||||| ||||||||||||||| |||||| Sbjct: 189 cttgaacatgttcacctcctcgatggcctggatgg 155
>ref|XM_330583.1| Neurospora crassa OR74A hypothetical protein (NCU03148.1) partial mRNA Length = 456 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 495 cttgaagatgttgacctcctcgatggccgggatgg 529 |||||| ||||| ||||||||||||||| |||||| Sbjct: 189 cttgaacatgttcacctcctcgatggcctggatgg 155
>gb|AY224531.1| Oryza sativa (japonica cultivar-group) isolate 23311 putative transcription factor BTF3 mRNA, complete cds Length = 360 Score = 46.1 bits (23), Expect = 0.14 Identities = 185/239 (77%) Strand = Plus / Minus Query: 400 agcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgc 459 |||||||| || || ||||| |||||||| |||||||| || || | || || |||||| Sbjct: 278 agcttctttgtttgtggagttccactgacaacccatgtattagcaccaattgaagcttgc 219 Query: 460 actttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatg 519 ||||| || || || ||||| || || | || |||||||| ||||| ||||| || ||| Sbjct: 218 actttaggattcagaaactgaataaccacatcatccttgaaaatgttaacctcttcaatg 159 Query: 520 gccgggatggtgttgacgcccaccctcttgagcgtgctctgcagccgcttgtcgtccgtg 579 | ||||||||||| || || || || || || |||||||| || | ||||| || ||| Sbjct: 158 ccagggatggtgtttactcctactcttttcagagtgctctgaagtcttttgtcatctgtg 99 Query: 580 gtcgccgtcttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcg 638 || | ||||| || || ||||||||||| | ||| ||| | ||||| || |||||||| Sbjct: 98 gttgtagtcttatggactgccttcttctttctgcgcacgctacccttccccccggtgcg 40
>ref|XM_388851.1| Gibberella zeae PH-1 chromosome 2 conserved hypothetical protein (FG08675.1) partial mRNA Length = 489 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 495 cttgaagatgttgacctcctcgatggccgggatgg 529 |||||| |||||||||||||| |||||| |||||| Sbjct: 219 cttgaacatgttgacctcctcaatggcctggatgg 185
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctc 515 |||||||||| | ||||||||| || | || ||||||||||| ||||||||||| Sbjct: 85062 ctttggggtttaagaactggataactacatcatccttgaagatattgacctcctc 85008
>gb|DQ447646.1| Nicotiana benthamiana BTF3 mRNA, complete cds Length = 483 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Minus Query: 403 ttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcact 462 ||||| |||||||| | ||||| || |||||||||||||| || || || ||||| ||| Sbjct: 275 ttctttgtctggggggaaccactaacaacccatgtgtttgcagcaatagatgcttgaact 216 Query: 463 ttggggttgaggaactggatgacgaggtcgtccttgaagatgttgac 509 ||||| || | ||| ||||| || | || |||||||| |||||||| Sbjct: 215 ttgggattaatgaattggataacaacatcctccttgaaaatgttgac 169
>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2 Length = 98769 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 495 cttgaagatgttgacctcctcgatggccgggatgg 529 |||||| ||||| ||||||||||||||| |||||| Sbjct: 8304 cttgaacatgttcacctcctcgatggcctggatgg 8338
>ref|NM_101651.2| Arabidopsis thaliana transcription factor AT1G17880 mRNA, complete cds Length = 731 Score = 44.1 bits (22), Expect = 0.56 Identities = 112/142 (78%) Strand = Plus / Minus Query: 338 tcttcaggtgctccatgttgtcagggcccaattggttgatgatagaaggaagaacatctt 397 ||||||||| ||||||||||| || || | |||| ||||||| |||||| | ||||| Sbjct: 428 tcttcaggttgtccatgttgtctggtccaagttggctgatgatctgaggaaggatatctt 369 Query: 398 gtagcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgctt 457 | | || |||||||| |||| || || || |||||||||||||| || || || |||| Sbjct: 368 gcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattgaagctt 309 Query: 458 gcactttggggttgaggaactg 479 | || || ||||||| |||||| Sbjct: 308 gaaccttagggttgatgaactg 287 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Minus Query: 586 gtcttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcggacgg 643 ||||||||||| ||||||||||| | | ||| || ||||| ||||| |||||||||| Sbjct: 180 gtcttgtgcacagccttcttctttcttctgacagtaccctttccgccagtgcggacgg 123
>gb|AF332407.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 498 Score = 44.1 bits (22), Expect = 0.56 Identities = 112/142 (78%) Strand = Plus / Minus Query: 338 tcttcaggtgctccatgttgtcagggcccaattggttgatgatagaaggaagaacatctt 397 ||||||||| ||||||||||| || || | |||| ||||||| |||||| | ||||| Sbjct: 340 tcttcaggttgtccatgttgtctggtccaagttggctgatgatctgaggaaggatatctt 281 Query: 398 gtagcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgctt 457 | | || |||||||| |||| || || || |||||||||||||| || || || |||| Sbjct: 280 gcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattgaagctt 221 Query: 458 gcactttggggttgaggaactg 479 | || || ||||||| |||||| Sbjct: 220 gaaccttagggttgatgaactg 199 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Minus Query: 586 gtcttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcggacgg 643 ||||||||||| ||||||||||| | | ||| || ||||| ||||| |||||||||| Sbjct: 92 gtcttgtgcacagccttcttctttcttctgacagtaccctttccgccagtgcggacgg 35
>gb|AY079361.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 529 Score = 44.1 bits (22), Expect = 0.56 Identities = 112/142 (78%) Strand = Plus / Minus Query: 338 tcttcaggtgctccatgttgtcagggcccaattggttgatgatagaaggaagaacatctt 397 ||||||||| ||||||||||| || || | |||| ||||||| |||||| | ||||| Sbjct: 340 tcttcaggttgtccatgttgtctggtccaagttggctgatgatctgaggaaggatatctt 281 Query: 398 gtagcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgctt 457 | | || |||||||| |||| || || || |||||||||||||| || || || |||| Sbjct: 280 gcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattgaagctt 221 Query: 458 gcactttggggttgaggaactg 479 | || || ||||||| |||||| Sbjct: 220 gaaccttagggttgatgaactg 199 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Minus Query: 586 gtcttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcggacgg 643 ||||||||||| ||||||||||| | | ||| || ||||| ||||| |||||||||| Sbjct: 92 gtcttgtgcacagccttcttctttcttctgacagtaccctttccgccagtgcggacgg 35
>gb|AY045793.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 740 Score = 44.1 bits (22), Expect = 0.56 Identities = 112/142 (78%) Strand = Plus / Minus Query: 338 tcttcaggtgctccatgttgtcagggcccaattggttgatgatagaaggaagaacatctt 397 ||||||||| ||||||||||| || || | |||| ||||||| |||||| | ||||| Sbjct: 426 tcttcaggttgtccatgttgtctggtccaagttggctgatgatctgaggaaggatatctt 367 Query: 398 gtagcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgctt 457 | | || |||||||| |||| || || || |||||||||||||| || || || |||| Sbjct: 366 gcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattgaagctt 307 Query: 458 gcactttggggttgaggaactg 479 | || || ||||||| |||||| Sbjct: 306 gaaccttagggttgatgaactg 285 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Minus Query: 586 gtcttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcggacgg 643 ||||||||||| ||||||||||| | | ||| || ||||| ||||| |||||||||| Sbjct: 178 gtcttgtgcacagccttcttctttcttctgacagtaccctttccgccagtgcggacgg 121
>gb|AY057667.1| Arabidopsis thaliana At1g17880/F2H15_10 mRNA, complete cds Length = 728 Score = 44.1 bits (22), Expect = 0.56 Identities = 112/142 (78%) Strand = Plus / Minus Query: 338 tcttcaggtgctccatgttgtcagggcccaattggttgatgatagaaggaagaacatctt 397 ||||||||| ||||||||||| || || | |||| ||||||| |||||| | ||||| Sbjct: 428 tcttcaggttgtccatgttgtctggtccaagttggctgatgatctgaggaaggatatctt 369 Query: 398 gtagcttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgctt 457 | | || |||||||| |||| || || || |||||||||||||| || || || |||| Sbjct: 368 gcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattgaagctt 309 Query: 458 gcactttggggttgaggaactg 479 | || || ||||||| |||||| Sbjct: 308 gaaccttagggttgatgaactg 287 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Minus Query: 586 gtcttgtgcaccgccttcttcttccggcggacggtgcccttgccgccggtgcggacgg 643 ||||||||||| ||||||||||| | | ||| || ||||| ||||| |||||||||| Sbjct: 180 gtcttgtgcacagccttcttctttcttctgacagtaccctttccgccagtgcggacgg 123
>gb|AC131767.4| Mus musculus BAC clone RP24-284N10 from chromosome 12, complete sequence Length = 150631 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 tgatagaaggaagaacatctt 397 ||||||||||||||||||||| Sbjct: 36400 tgatagaaggaagaacatctt 36420
>ref|XM_425222.1| PREDICTED: Gallus gallus similar to insulin-like growth factor binding protein, acid labile subunit; insulin-like growth factor binding protein acid labile subunit (LOC427649), mRNA Length = 2124 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 tcgtcccctggggctggcaga 193 ||||||||||||||||||||| Sbjct: 65 tcgtcccctggggctggcaga 85
>gb|AY651062.1| Musa acuminata BTF3b-like transcription factor mRNA, complete cds Length = 646 Score = 42.1 bits (21), Expect = 2.2 Identities = 93/117 (79%) Strand = Plus / Minus Query: 369 ttggttgatgatagaaggaagaacatcttgtagcttcttggtctggggagtcccactgac 428 |||||||||||| | ||| || | |||||| || || || |||||||||| || ||||| Sbjct: 396 ttggttgatgattgcaggtagcaaatcttgaagttttttagtctggggagaaccgctgac 337 Query: 429 cacccatgtgtttgcggcgatggacgcttgcactttggggttgaggaactggatgac 485 |||||||| || || || || || ||||||||||| || || | ||||||||||| Sbjct: 336 aacccatgtattggctgcaattgaagcttgcacttttggattaggaaactggatgac 280
>gb|DQ205677.1| Teramnus labialis BTF3-like protein 2 gene, partial sequence Length = 916 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| ||||||||||| || | Sbjct: 114 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaattg 55 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 54 cagggatgg 46
>gb|DQ205673.1| Pseudovigna argentea BTF3-like protein gene, partial sequence Length = 709 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| ||||||||||| || | Sbjct: 114 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaattg 55 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 54 cagggatgg 46
>gb|DQ205672.1| Teramnus uncinatus BTF3-like protein gene, partial sequence Length = 898 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| ||||||||||| || | Sbjct: 100 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaattg 41 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 40 cagggatgg 32
>gb|DQ205665.1| Glycine cyrtoloba BTF3-like protein 2B gene, partial sequence Length = 652 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| ||||||||||| || | Sbjct: 72 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 13 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 12 cagggatgg 4
>gb|DQ205661.1| Glycine microphylla BTF3-like protein 2B gene, partial sequence Length = 664 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 461 ctttggggttgaggaactggatgacgaggtcgtccttgaagatgttgacctcctcgatgg 520 ||||||| || || |||||||| || | ||| ||||| ||||| ||||||||||| || | Sbjct: 72 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 13 Query: 521 ccgggatgg 529 | ||||||| Sbjct: 12 cagggatgg 4
>gb|DQ017438.1| Drosophila melanogaster strain Oregon R CG10692 gene, promoter region and partial cds Length = 1642 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 cgtcgtcgtcattctcctcct 283 ||||||||||||||||||||| Sbjct: 1118 cgtcgtcgtcattctcctcct 1138
>ref|XM_754128.1| Ustilago maydis 521 hypothetical protein (UM03074.1) partial mRNA Length = 501 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 493 tccttgaagatgttgacctcctcga 517 |||||||| |||||||||||||||| Sbjct: 191 tccttgaacatgttgacctcctcga 167
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 cggtgcccttgccgccggtgc 637 ||||||||||||||||||||| Sbjct: 239378 cggtgcccttgccgccggtgc 239398
>gb|AY232049.1| Drosophila yakuba clone yak-ad_bic mRNA sequence Length = 465 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 600 cttcttcttccggcggacggtgcccttgccgcc 632 ||||||||| |||||| ||||||||||||||| Sbjct: 78 cttcttcttgcggcggggggtgcccttgccgcc 46 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 490 tcgtccttgaagatgttgacctcctcgatggccgggatggtgtt 533 |||| ||||| |||||| |||||||||||| | ||||| ||||| Sbjct: 188 tcgttcttgatgatgttcacctcctcgatgccggggattgtgtt 145
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 615 gacggtgcccttgccgccggtgcgg 639 ||||||||||||||||||| ||||| Sbjct: 276889 gacggtgcccttgccgccgttgcgg 276913
>ref|NM_058131.3| Drosophila melanogaster CG6712-RA (CG6712), mRNA Length = 1342 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cgtcgtcgtcattctcctcct 283 ||||||||||||||||||||| Sbjct: 325 cgtcgtcgtcattctcctcct 305
>gb|AY051683.1| Drosophila melanogaster LD23405 full length cDNA Length = 1314 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cgtcgtcgtcattctcctcct 283 ||||||||||||||||||||| Sbjct: 285 cgtcgtcgtcattctcctcct 265
>gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR02B06, complete sequence Length = 174314 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 cgtcgtcgtcattctcctcct 283 ||||||||||||||||||||| Sbjct: 87088 cgtcgtcgtcattctcctcct 87108
>emb|Y09106.1|NPY09106 N.plumbaginifolia mRNA for BTF3-like transcription factor Length = 664 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 402 cttcttggtctggggagtcccactgaccacccatgtgtttgcggcgatggacgcttgcac 461 |||||||||||| || | ||||| || ||||| |||||||| || || || ||||| || Sbjct: 314 cttcttggtctgaggggaaccactaacaacccaagtgtttgcagcaatagaggcttgaac 255 Query: 462 tttggggtt 470 ||||||||| Sbjct: 254 tttggggtt 246
>emb|CT571254.7| Mouse DNA sequence from clone RP23-335F6 on chromosome 12, complete sequence Length = 189879 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 tgatagaaggaagaacatctt 397 ||||||||||||||||||||| Sbjct: 189497 tgatagaaggaagaacatctt 189517
>gb|AE003635.2| Drosophila melanogaster chromosome 2L, section 44 of 83 of the complete sequence Length = 308012 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 cgtcgtcgtcattctcctcct 283 ||||||||||||||||||||| Sbjct: 6564 cgtcgtcgtcattctcctcct 6584
>gb|AC172859.1| Brassica rapa subsp. pekinensis clone KBrB023K01, complete sequence Length = 102061 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 586 gtcttgtgcaccgccttcttcttcc 610 ||||||||||| ||||||||||||| Sbjct: 95775 gtcttgtgcacagccttcttcttcc 95799
>ref|NM_112388.2| Arabidopsis thaliana unknown protein AT3G15250 mRNA, complete cds Length = 934 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 caccgccttcttcttccggc 613 |||||||||||||||||||| Sbjct: 576 caccgccttcttcttccggc 557
>ref|NM_184408.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2730 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgtcgtcgtcattctcctcc 282 |||||||||||||||||||| Sbjct: 317 cgtcgtcgtcattctcctcc 336
>ref|XM_517694.1| PREDICTED: Pan troglodytes similar to WD repeat domain 41 (LOC461795), mRNA Length = 1492 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 1357 ttccaactgcagcaaataca 1338
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 gcagccgcttgtcgtccgtggtcg 583 |||| ||||||||||||||||||| Sbjct: 2034243 gcaggcgcttgtcgtccgtggtcg 2034266
>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence Length = 164920 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gaggtcgtccttgaagatgt 505 |||||||||||||||||||| Sbjct: 77827 gaggtcgtccttgaagatgt 77846
>gb|AY630776.1| Arabidopsis thaliana hypothetical protein (At3G15250) mRNA, complete cds Length = 967 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 caccgccttcttcttccggc 613 |||||||||||||||||||| Sbjct: 576 caccgccttcttcttccggc 557
>gb|BC001211.1| Homo sapiens kinesin family member C3, mRNA (cDNA clone MGC:3226 IMAGE:3503847), complete cds Length = 3351 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 1412 tgttgacctcctcgatggcc 1393
>gb|BC040241.1| Homo sapiens WD repeat domain 41, mRNA (cDNA clone MGC:5405 IMAGE:3447269), complete cds Length = 2356 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 976 ttccaactgcagcaaataca 957
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aagtttccaactgcagcaaa 50 |||||||||||||||||||| Sbjct: 64684 aagtttccaactgcagcaaa 64703
>ref|NM_005550.3| Homo sapiens kinesin family member C3 (KIFC3), mRNA Length = 3366 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 1443 tgttgacctcctcgatggcc 1424
>ref|XM_655175.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2663.2), mRNA Length = 1419 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cctggggctggcagagtcta 198 |||||||||||||||||||| Sbjct: 378 cctggggctggcagagtcta 397
>gb|AC123026.4| Mus musculus BAC clone RP24-549O22 from chromosome 3, complete sequence Length = 175610 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 atacagaaggcctaggagag 69 |||||||||||||||||||| Sbjct: 75984 atacagaaggcctaggagag 76003
>gb|BC041132.1| Homo sapiens kinesin family member C3, mRNA (cDNA clone MGC:47520 IMAGE:5760988), complete cds Length = 3345 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 1273 tgttgacctcctcgatggcc 1254
>emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chromosome 9 Contains part of the CRSP8 gene for subunit 8 of a cofactor required for Sp1 transcriptional activation and a CpG island, complete sequence Length = 77621 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gaaggcctaggagagggagc 74 |||||||||||||||||||| Sbjct: 17827 gaaggcctaggagagggagc 17846
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 gcagccgcttgtcgtccgtggtcg 583 |||||||||||||||| ||||||| Sbjct: 74508 gcagccgcttgtcgtcggtggtcg 74531
>ref|XM_501234.1| Yarrowia lipolytica CLIB122, YALI0B22726g predicted mRNA Length = 3390 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gtcgtcattctcctccttgg 286 |||||||||||||||||||| Sbjct: 1731 gtcgtcattctcctccttgg 1712
>gb|BC047051.1| Homo sapiens kinesin family member C3, mRNA (cDNA clone MGC:51269 IMAGE:5297265), complete cds Length = 3084 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 1571 tgttgacctcctcgatggcc 1552
>gb|BC034234.1| Homo sapiens kinesin family member C3, mRNA (cDNA clone MGC:39787 IMAGE:5296397), complete cds Length = 3237 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 1772 tgttgacctcctcgatggcc 1753
>emb|AJ276219.1|SAU276219 Stigmatella aurantiaca ephA gene for putative epoxide hydrolase Length = 1587 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 gatcctcttcaggtgctccatgtt 356 |||| ||||||||||||||||||| Sbjct: 63 gatcttcttcaggtgctccatgtt 40
>emb|AJ276218.1|SAU276218 Stigmatella aurantiaca hspA gene for heat shock protein Length = 3459 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 gatcctcttcaggtgctccatgtt 356 |||| ||||||||||||||||||| Sbjct: 3397 gatcttcttcaggtgctccatgtt 3420
>emb|CR860847.1| Pongo pygmaeus mRNA; cDNA DKFZp469P1314 (from clone DKFZp469P1314) Length = 3341 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 1369 tgttgacctcctcgatggcc 1350
>emb|AL834138.1|HSM805349 Homo sapiens mRNA; cDNA DKFZp434J2114 (from clone DKFZp434J2114) Length = 3327 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 1905 ttccaactgcagcaaataca 1886
>emb|CR625903.1| full-length cDNA clone CS0DM014YF08 of Fetal liver of Homo sapiens (human) Length = 1643 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 1172 ttccaactgcagcaaataca 1153
>emb|CR616409.1| full-length cDNA clone CS0DL008YJ03 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1654 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 1151 ttccaactgcagcaaataca 1132
>emb|CR615160.1| full-length cDNA clone CS0DD008YG21 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1432 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 30 tgttgacctcctcgatggcc 11
>dbj|AK091891.1| Homo sapiens cDNA FLJ34572 fis, clone KIDNE2008117, highly similar to Homo sapiens microtubule-based motor (HsKIFC3) mRNA Length = 3159 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 580 tgttgacctcctcgatggcc 561
>dbj|AK023977.1| Homo sapiens cDNA FLJ13915 fis, clone Y79AA1000328, weakly similar to SEL-10 PROTEIN Length = 2301 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 926 ttccaactgcagcaaataca 907
>dbj|AK021855.1| Homo sapiens cDNA FLJ11793 fis, clone HEMBA1006130, weakly similar to SEL-10 PROTEIN Length = 1941 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 1010 ttccaactgcagcaaataca 991
>dbj|AK001766.1| Homo sapiens cDNA FLJ10904 fis, clone OVARC1000013, weakly similar to APOPTOTIC PROTEASE ACTIVATING FACTOR 1 Length = 2536 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 1170 ttccaactgcagcaaataca 1151
>ref|NM_057456.3| Drosophila melanogaster -Tubulin at 23C CG3157-RA (gammaTub23C), mRNA Length = 1853 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gaggtcgtccttgaagatgt 505 |||||||||||||||||||| Sbjct: 1436 gaggtcgtccttgaagatgt 1417
>ref|NM_018268.2| Homo sapiens WD repeat domain 41 (WDR41), mRNA Length = 2608 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 1191 ttccaactgcagcaaataca 1172
>gb|AY069633.1| Drosophila melanogaster LD40196 full length cDNA Length = 1857 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gaggtcgtccttgaagatgt 505 |||||||||||||||||||| Sbjct: 1426 gaggtcgtccttgaagatgt 1407
>gb|AC022422.5| Homo sapiens chromosome 5 clone CTD-2199L4, complete sequence Length = 245697 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 184666 ttccaactgcagcaaataca 184685
>dbj|AB169251.1| Macaca fascicularis testis cDNA, clone: QtsA-18221, similar to human thioredoxin domain containing 2 (spermatozoa) (TXNDC2),mRNA, RefSeq: NM_032243.4 Length = 1567 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcctccttgggctggatggc 296 |||||||||||||||||||| Sbjct: 932 tcctccttgggctggatggc 913
>gb|BC008014.1|BC008014 Homo sapiens, Similar to kinesin family member C3, clone IMAGE:3533024, mRNA, partial cds Length = 2347 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 408 tgttgacctcctcgatggcc 389
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aagtttccaactgcagcaaa 50 |||||||||||||||||||| Sbjct: 25122029 aagtttccaactgcagcaaa 25122048
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgtcgtcgtcattctcctcc 282 |||||||||||||||||||| Sbjct: 2866025 cgtcgtcgtcattctcctcc 2866006
>gb|AC092118.3| Homo sapiens chromosome 16 clone CTD-2600O9, complete sequence Length = 148794 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 58020 tgttgacctcctcgatggcc 58039
>gb|DQ000563.1| Synthetic construct clone PSF:109395 DKFZp434J2114 gene, complete cds Length = 690 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 214 ttccaactgcagcaaataca 195
>gb|AE009634.1| Brucella melitensis 16M chromosome I, section 191 of 195 of the complete sequence Length = 10029 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 560 gcagccgcttgtcgtccgtggtcg 583 |||| ||||||||||||||||||| Sbjct: 7240 gcaggcgcttgtcgtccgtggtcg 7217
>gb|AC010234.5|AC010234 Homo sapiens chromosome 5 clone CTC-337B15, complete sequence Length = 143553 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 119194 ttccaactgcagcaaataca 119175
>gb|AF115511.1| Homo sapiens MSTP048 (MST048) mRNA, complete cds Length = 2388 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 972 ttccaactgcagcaaataca 953
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gcaccgccttcttcttccgg 612 |||||||||||||||||||| Sbjct: 51365 gcaccgccttcttcttccgg 51346
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 gcagccgcttgtcgtccgtggtcg 583 |||| ||||||||||||||||||| Sbjct: 2050671 gcaggcgcttgtcgtccgtggtcg 2050694
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0030H07 Length = 168253 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgtcgtcgtcattctcctcc 282 |||||||||||||||||||| Sbjct: 73023 cgtcgtcgtcattctcctcc 73004
>dbj|AP000413.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K7L4 Length = 65047 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 594 caccgccttcttcttccggc 613 |||||||||||||||||||| Sbjct: 16111 caccgccttcttcttccggc 16130
>gb|AY924768.1| Arabidopsis thaliana hypothetical protein (At3g15250) gene, complete cds Length = 681 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 caccgccttcttcttccggc 613 |||||||||||||||||||| Sbjct: 564 caccgccttcttcttccggc 545
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 ccgcttgtcgtccgtggtcg 583 |||||||||||||||||||| Sbjct: 861484 ccgcttgtcgtccgtggtcg 861503
>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones DS02190 and DS00906, complete sequence Length = 163403 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gaggtcgtccttgaagatgt 505 |||||||||||||||||||| Sbjct: 56011 gaggtcgtccttgaagatgt 56030
>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete sequence Length = 314957 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gaggtcgtccttgaagatgt 505 |||||||||||||||||||| Sbjct: 144689 gaggtcgtccttgaagatgt 144670
>gb|AF004426.1|AF004426 Homo sapiens microtubule-based motor (HsKIFC3) mRNA, complete cds Length = 2064 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 829 tgttgacctcctcgatggcc 810
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gcaccgccttcttcttccgg 612 |||||||||||||||||||| Sbjct: 1860849 gcaccgccttcttcttccgg 1860868
>gb|BC001807.1| Homo sapiens cDNA clone IMAGE:3354734, containing frame-shift errors Length = 1713 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttccaactgcagcaaataca 54 |||||||||||||||||||| Sbjct: 1179 ttccaactgcagcaaataca 1160
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 gcagccgcttgtcgtccgtggtcg 583 |||| ||||||||||||||||||| Sbjct: 2047790 gcaggcgcttgtcgtccgtggtcg 2047813
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gtcgtcattctcctccttgg 286 |||||||||||||||||||| Sbjct: 2989394 gtcgtcattctcctccttgg 2989375
>dbj|AB209290.1| Homo sapiens mRNA for Kinesin-like protein KIFC3 variant protein Length = 3328 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgttgacctcctcgatggcc 522 |||||||||||||||||||| Sbjct: 1378 tgttgacctcctcgatggcc 1359
>emb|AL606929.13| Mouse DNA sequence from clone RP23-139J21 on chromosome 4, complete sequence Length = 198728 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ctgcagcagccacctgcttc 318 |||||||||||||||||||| Sbjct: 98115 ctgcagcagccacctgcttc 98096
>gb|AC170592.3| Mus musculus chromosome 3, clone wi1-425G4, complete sequence Length = 41042 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gtgctccatgttgtcagggc 364 |||||||||||||||||||| Sbjct: 8608 gtgctccatgttgtcagggc 8589
>emb|AL732451.8| Mouse DNA sequence from clone RP23-85G19 on chromosome X, complete sequence Length = 213822 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 aaactcaggagaaactaaaa 32 |||||||||||||||||||| Sbjct: 128550 aaactcaggagaaactaaaa 128569
>gb|M61765.1|DROGTUB D.melanogaster gamma-tubulin mRNA, complete cds Length = 1875 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gaggtcgtccttgaagatgt 505 |||||||||||||||||||| Sbjct: 1465 gaggtcgtccttgaagatgt 1446 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,650,840 Number of Sequences: 3902068 Number of extensions: 5650840 Number of successful extensions: 114025 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 113346 Number of HSP's gapped (non-prelim): 670 length of query: 643 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 620 effective length of database: 17,143,297,704 effective search space: 10628844576480 effective search space used: 10628844576480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)