| Clone Name | rbags34b03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1951 Score = 172 bits (87), Expect = 1e-39 Identities = 150/171 (87%) Strand = Plus / Minus Query: 532 aatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtc 591 |||||||||||||||||||||||||||||| || ||||||| ||||||||| || ||||| Sbjct: 1351 aatagcagctttcatcacatcaaggttcttacgcggtgcaatacccttgtcatagaagtc 1292 Query: 592 tagtctctcctcaacctgttcacgcagcttctcaccaaaaatggagctgctcatatctga 651 ||||||||||||||| ||||| |||||||||| ||| |||| ||| | ||| ||||| Sbjct: 1291 tagtctctcctcaacttgttcgcgcagcttctgaccgaaaactgaggtattcaactctga 1232 Query: 652 atagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagc 702 ||| ||||| || ||||| |||||||||||||| ||||||||||||||||| Sbjct: 1231 ataacagtcgatgcgtgaggcaatggaacatttatttgccaggtatcgagc 1181 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttggg 306 ||||||||||||||||||||||| Sbjct: 1626 ttcttctttttcttcttcttggg 1604
>dbj|AK107041.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C03, full insert sequence Length = 1951 Score = 172 bits (87), Expect = 1e-39 Identities = 150/171 (87%) Strand = Plus / Minus Query: 532 aatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtc 591 |||||||||||||||||||||||||||||| || ||||||| ||||||||| || ||||| Sbjct: 1351 aatagcagctttcatcacatcaaggttcttacgcggtgcaatacccttgtcatagaagtc 1292 Query: 592 tagtctctcctcaacctgttcacgcagcttctcaccaaaaatggagctgctcatatctga 651 ||||||||||||||| ||||| |||||||||| ||| |||| ||| | ||| ||||| Sbjct: 1291 tagtctctcctcaacttgttcgcgcagcttctgaccgaaaactgaggtattcaactctga 1232 Query: 652 atagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagc 702 ||| ||||| || ||||| |||||||||||||| ||||||||||||||||| Sbjct: 1231 ataacagtcgatgcgtgaggcaatggaacatttatttgccaggtatcgagc 1181 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttggg 306 ||||||||||||||||||||||| Sbjct: 1626 ttcttctttttcttcttcttggg 1604
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Minus Query: 532 aatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtc 591 |||||||||||||||||||||||||||||| || ||||||| ||||||||| || ||||| Sbjct: 27875697 aatagcagctttcatcacatcaaggttcttacgcggtgcaatacccttgtcatagaagtc 27875638 Query: 592 tagtctctcctcaacctgttcacgcagcttctcaccaaaaa 632 ||||||||||||||| ||||| |||||||||| ||| |||| Sbjct: 27875637 tagtctctcctcaacttgttcgcgcagcttctgaccgaaaa 27875597 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 648 ctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagc 702 ||||||| ||||| || ||||| |||||||||||||| ||||||||||||||||| Sbjct: 27875500 ctgaataacagtcgatgcgtgaggcaatggaacatttatttgccaggtatcgagc 27875446 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttggg 306 ||||||||||||||||||||||| Sbjct: 27876076 ttcttctttttcttcttcttggg 27876054 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 28808681 ttcttctttttcttcttcttgg 28808702 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 17614083 ttcttctttttcttcttctt 17614064 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 10408376 ttcttctttttcttcttctt 10408357 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 1971606 ttcttctttttcttcttctt 1971587
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Minus Query: 532 aatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtc 591 |||||||||||||||||||||||||||||| || ||||||| ||||||||| || ||||| Sbjct: 39055 aatagcagctttcatcacatcaaggttcttacgcggtgcaatacccttgtcatagaagtc 38996 Query: 592 tagtctctcctcaacctgttcacgcagcttctcaccaaaaa 632 ||||||||||||||| ||||| |||||||||| ||| |||| Sbjct: 38995 tagtctctcctcaacttgttcgcgcagcttctgaccgaaaa 38955 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 648 ctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagc 702 ||||||| ||||| || ||||| |||||||||||||| ||||||||||||||||| Sbjct: 38858 ctgaataacagtcgatgcgtgaggcaatggaacatttatttgccaggtatcgagc 38804 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttggg 306 ||||||||||||||||||||||| Sbjct: 39434 ttcttctttttcttcttcttggg 39412
>gb|BT014111.1| Lycopersicon esculentum clone 133215F, mRNA sequence Length = 1534 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 530 tcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaag 589 ||||||||||||||||||||||| ||||| || || |||||||| |||||||| |||||| Sbjct: 1354 tcaatagcagctttcatcacatctaggttttttcgtggtgcaacccccttgtcataaaag 1295 Query: 590 tctagtctctcctcaacctgttcacgcagcttctcaccaaaa 631 ||||| | ||||||||| |||||||| || ||||| |||||| Sbjct: 1294 tctagacgctcctcaacttgttcacggagtttctctccaaaa 1253
>gb|AY104327.1| Zea mays PCO078604 mRNA sequence Length = 1960 Score = 107 bits (54), Expect = 5e-20 Identities = 144/174 (82%) Strand = Plus / Minus Query: 529 gtcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaa 588 ||||||||| |||||||||||||||||||| || || || |||||||||||||| || || Sbjct: 1356 gtcaatagcggctttcatcacatcaaggtttttacgaggcgcaacacccttgtcatagaa 1297 Query: 589 gtctagtctctcctcaacctgttcacgcagcttctcaccaaaaatggagctgctcatatc 648 || ||||||||||| || || ||||||| ||| | ||||| | ||| |||| || Sbjct: 1296 ttccagtctctcctcgacttgctcacgcaacttttgcccaaagacagaggtgctagcctc 1237 Query: 649 tgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagc 702 || ||||||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 1236 cgagtagcagtcaatgcgtgaagcaatcgagcatttgtttgccaggtaacgagc 1183
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 536 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 595 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 13197687 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 13197746 Query: 596 ctctcctcaacctgttcacgcagctt 621 | ||||||||| || ||||| ||||| Sbjct: 13197747 cgctcctcaacttgctcacgaagctt 13197772 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 281 cggttcttctttttcttcttcttggg 306 ||||||||||| |||||||||||||| Sbjct: 13197312 cggttcttcttcttcttcttcttggg 13197337 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 25702988 ttcttctttttcttcttctt 25703007 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 14212710 ttcttctttttcttcttctt 14212691
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 536 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 595 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 28951 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 28892 Query: 596 ctctcctcaacctgttcacgcagctt 621 | ||||||||| || ||||| ||||| Sbjct: 28891 cgctcctcaacttgctcacgaagctt 28866 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 cggttcttctttttcttcttcttggg 306 ||||||||||| |||||||||||||| Sbjct: 29326 cggttcttcttcttcttcttcttggg 29301
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 536 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 595 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 13194462 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 13194521 Query: 596 ctctcctcaacctgttcacgcagctt 621 | ||||||||| || ||||| ||||| Sbjct: 13194522 cgctcctcaacttgctcacgaagctt 13194547 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 281 cggttcttctttttcttcttcttggg 306 ||||||||||| |||||||||||||| Sbjct: 13194087 cggttcttcttcttcttcttcttggg 13194112 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 25794297 ttcttctttttcttcttctt 25794316 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 14207685 ttcttctttttcttcttctt 14207666
>dbj|AK069305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D01, full insert sequence Length = 1835 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 536 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 595 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 1367 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 1308 Query: 596 ctctcctcaacctgttcacgcagctt 621 | ||||||||| || ||||| ||||| Sbjct: 1307 cgctcctcaacttgctcacgaagctt 1282 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 cggttcttctttttcttcttcttggg 306 ||||||||||| |||||||||||||| Sbjct: 1660 cggttcttcttcttcttcttcttggg 1635
>dbj|AK059432.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F04, full insert sequence Length = 910 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 536 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 595 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 295 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 236 Query: 596 ctctcctcaacctgttcacgcagctt 621 | ||||||||| || ||||| ||||| Sbjct: 235 cgctcctcaacttgctcacgaagctt 210 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 cggttcttctttttcttcttcttggg 306 ||||||||||| |||||||||||||| Sbjct: 589 cggttcttcttcttcttcttcttggg 564
>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07, from chromosome 3, complete sequence Length = 149539 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 536 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 595 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 122154 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 122095 Query: 596 ctctcctcaacctgttcacgcagctt 621 | ||||||||| || ||||| ||||| Sbjct: 122094 cgctcctcaacttgctcacgaagctt 122069 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 cggttcttctttttcttcttcttggg 306 ||||||||||| |||||||||||||| Sbjct: 122529 cggttcttcttcttcttcttcttggg 122504
>gb|AY106286.1| Zea mays PCO078601 mRNA sequence Length = 913 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 529 gtcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaa 588 |||||||||||||||||||||||||||||| || || || |||||||||||||| || || Sbjct: 89 gtcaatagcagctttcatcacatcaaggtttttacgaggcgcaacacccttgtcatagaa 30 Query: 589 gtctagtctctc 600 || |||||||| Sbjct: 29 ttccagtctctc 18 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 285 tcttctttttcttcttcttgggggtct 311 |||||||||||||||||||||| |||| Sbjct: 375 tcttctttttcttcttcttgggagtct 349
>ref|NM_104489.2| Arabidopsis thaliana NOP56 AT1G56110 (NOP56) mRNA, complete cds Length = 1779 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 542 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 601 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1330 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1271 Query: 602 tcaacctgttcacgcagcttctcaccaaaa 631 ||||| ||||| || ||||||||||||||| Sbjct: 1270 tcaacttgttcgcgaagcttctcaccaaaa 1241 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttcttcacggatgcatca 487 ||||||||| |||||||||||||| || |||||| Sbjct: 1412 cttcttcttcttgcttttcttcaccgaggcatca 1379
>gb|AC009894.2| Arabidopsis thaliana chromosome I BAC T6H22 genomic sequence, complete sequence Length = 96489 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 542 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 601 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 44847 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 44788 Query: 602 tcaacctgttcacgcagcttctcaccaaaa 631 ||||| ||||| || ||||||||||||||| Sbjct: 44787 tcaacttgttcgcgaagcttctcaccaaaa 44758 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttcttcacggatgcatca 487 ||||||||| |||||||||||||| || |||||| Sbjct: 45018 cttcttcttcttgcttttcttcaccgaggcatca 44985
>gb|AY102151.1| Arabidopsis thaliana At1g56110/T6H22_9 mRNA, complete cds Length = 1569 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 542 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 601 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1274 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1215 Query: 602 tcaacctgttcacgcagcttctcaccaaaa 631 ||||| ||||| || ||||||||||||||| Sbjct: 1214 tcaacttgttcgcgaagcttctcaccaaaa 1185 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttcttcacggatgcatca 487 ||||||||| |||||||||||||| || |||||| Sbjct: 1356 cttcttcttcttgcttttcttcaccgaggcatca 1323
>gb|AY052337.1| Arabidopsis thaliana At1g56110/T6H22_9 mRNA sequence Length = 1398 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 542 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 601 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1263 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1204 Query: 602 tcaacctgttcacgcagcttctcaccaaaa 631 ||||| ||||| || ||||||||||||||| Sbjct: 1203 tcaacttgttcgcgaagcttctcaccaaaa 1174 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttcttcacggatgcatca 487 ||||||||| |||||||||||||| || |||||| Sbjct: 1345 cttcttcttcttgcttttcttcaccgaggcatca 1312
>gb|AY039541.1| Arabidopsis thaliana At1g56110/T6H22_9 mRNA, complete cds Length = 1777 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 542 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 601 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1328 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1269 Query: 602 tcaacctgttcacgcagcttctcaccaaaa 631 ||||| ||||| || ||||||||||||||| Sbjct: 1268 tcaacttgttcgcgaagcttctcaccaaaa 1239 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttcttcacggatgcatca 487 ||||||||| |||||||||||||| || |||||| Sbjct: 1410 cttcttcttcttgcttttcttcaccgaggcatca 1377
>gb|AF302492.1|AF302492 Arabidopsis thaliana NOP56-like protein mRNA, complete cds Length = 1569 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 542 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 601 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1274 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1215 Query: 602 tcaacctgttcacgcagcttctcaccaaaa 631 ||||| ||||| || ||||||||||||||| Sbjct: 1214 tcaacttgttcgcgaagcttctcaccaaaa 1185 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttcttcacggatgcatca 487 ||||||||| |||||||||||||| || |||||| Sbjct: 1356 cttcttcttcttgcttttcttcaccgaggcatca 1323
>gb|AY087080.1| Arabidopsis thaliana clone 31447 mRNA, complete sequence Length = 1752 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 542 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 601 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1330 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1271 Query: 602 tcaacctgttcacgcagcttctcaccaaaa 631 ||||| ||||| || ||||||||||||||| Sbjct: 1270 tcaacttgttcgcgaagcttctcaccaaaa 1241 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttcttcacggatgcatca 487 ||||||||| |||||||||||||| || |||||| Sbjct: 1412 cttcttcttcttgcttttcttcaccgaggcatca 1379
>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence Length = 124563 Score = 73.8 bits (37), Expect = 7e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 530 tcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaag 589 |||||||||| |||||||||||||| |||||| || || ||||| ||||| || |||||| Sbjct: 57154 tcaatagcagatttcatcacatcaatgttcttacgaggggcaactcccttatcataaaag 57095 Query: 590 tctagtctctcctcaacctgttcacgcagcttctcaccaaa 630 || |||| ||| ||||| || ||||| || ||||| ||||| Sbjct: 57094 tcaagtcgctcttcaacttgctcacggagtttctccccaaa 57054
>gb|AY553910.1| Brassica juncea putative preRNA processing ribonucleoprotein (Nop1) mRNA, partial cds Length = 414 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 542 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 601 ||||| ||||| | |||||| || || |||||||| ||||| |||||||| || || ||| Sbjct: 329 ttcatgacatccacgttcttacgtggggcaacacctttgtcataaaagtccagcctttcc 270 Query: 602 tcaacctgttcacgcagcttctcaccaaa 630 || || ||||| || |||||||||||||| Sbjct: 269 tctacttgttcccgaagcttctcaccaaa 241
>dbj|AK116079.1| Ciona intestinalis cDNA, clone:citb007m06, full insert sequence Length = 1979 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 654 agcagtcaatacgtgaagcaatggaacatttgtttgccag 693 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1224 agcagtcgatacgtgaagcaatggagcatttgttagccag 1185
>gb|AC138199.22| Medicago truncatula clone mth2-15g10, complete sequence Length = 109479 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 654 agcagtcaatacgtgaagcaatggaacatttgtttgc 690 |||||||||| ||||| ||||| |||||||||||||| Sbjct: 62910 agcagtcaattcgtgatgcaattgaacatttgtttgc 62874
>ref|NM_112122.2| Arabidopsis thaliana unknown protein AT3G12860 mRNA, complete cds Length = 1500 Score = 48.1 bits (24), Expect = 0.039 Identities = 122/152 (80%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 540 ctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctct 599 ||||||| ||||||| ||||| || || |||||||| ||||| |||||||| ||||| | Sbjct: 1276 ctttcattacatcaacattcttacgtggggcaacacctttgtcataaaagtcaagtcttt 1217 Query: 600 cctcaacctgttcacgcagcttctcaccaaaaa-tggagctgctcatatctgaatagcag 658 |||| || ||||| | || |||||||| ||| || || |||| ||||||| | || Sbjct: 1216 cctctacttgttcccttagtttctcaccgaaagctgtag-tgctgttatctgagaaacaa 1158 Query: 659 tcaatacgtgaagcaatggaacatttgtttgc 690 ||||| || |||||||||||||| |||||||| Sbjct: 1157 tcaatccgggaagcaatggaacacttgtttgc 1126
>ref|XM_449423.1| Candida glabrata CBS138 hypothetical protein (CAGL0M01804g) partial mRNA Length = 2856 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 453 acttcttctttttgcttttcttca 476 |||||||||||||||||||||||| Sbjct: 356 acttcttctttttgcttttcttca 333
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 453 acttcttctttttgcttttcttca 476 |||||||||||||||||||||||| Sbjct: 211794 acttcttctttttgcttttcttca 211771 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 503168 ttcttctttttcttcttctt 503149
>ref|NM_213223.1| Danio rerio zgc:85717 (zgc:85717), mRNA Length = 1696 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 286 cttctttttcttcttcttgggggtctc 312 |||||| |||||||||||||||||||| Sbjct: 466 cttcttcttcttcttcttgggggtctc 440
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 cgccgcttcagtccatgccatgc 72 ||||||||||||||||||||||| Sbjct: 1645621 cgccgcttcagtccatgccatgc 1645643
>ref|XM_418351.1| PREDICTED: Gallus gallus similar to LYRIC (LOC420239), mRNA Length = 2667 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttggatttccc 243 ||||||||||||||||||||| ||||| Sbjct: 1164 tttcttcttctttttcttggacttccc 1138 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 1172 ttcttctttttcttcttctt 1153
>gb|BC067590.1| Danio rerio zgc:85717, mRNA (cDNA clone MGC:85717 IMAGE:6966984), complete cds Length = 1696 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 286 cttctttttcttcttcttgggggtctc 312 |||||| |||||||||||||||||||| Sbjct: 466 cttcttcttcttcttcttgggggtctc 440
>ref|XM_954128.1| Neurospora crassa OR74A hypothetical protein (NCU06874.1) partial mRNA Length = 3039 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 282 ggttcttctttttcttcttcttggggg 308 |||||||||| |||||||||||||||| Sbjct: 1777 ggttcttcttcttcttcttcttggggg 1751
>ref|XM_327159.1| Neurospora crassa OR74A hypothetical protein (NCU06874.1) partial mRNA Length = 3039 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 282 ggttcttctttttcttcttcttggggg 308 |||||||||| |||||||||||||||| Sbjct: 1777 ggttcttcttcttcttcttcttggggg 1751
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 cgccgcttcagtccatgccatgc 72 ||||||||||||||||||||||| Sbjct: 2892542 cgccgcttcagtccatgccatgc 2892564
>ref|XM_800517.1| Trypanosoma cruzi strain CL Brener nucleolar protein (Tc00.1047053503773.50) partial mRNA Length = 633 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 600 cctcaacctgttcacgcagcttctcaccaaa 630 |||| |||||||| ||||||||||||||||| Sbjct: 427 cctccacctgttcccgcagcttctcaccaaa 397
>ref|XM_789685.1| PREDICTED: Strongylocentrotus purpuratus similar to nucleolar protein 5A (LOC590067), mRNA Length = 1959 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttggg 306 ||||||||||||||||||||||| Sbjct: 1778 ttcttctttttcttcttcttggg 1756 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 1916 ttcttctttttcttcttctt 1897 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 1853 ttcttctttttcttcttctt 1834
>ref|XM_783146.1| PREDICTED: Strongylocentrotus purpuratus similar to CG32466-PA, isoform A (LOC583226), mRNA Length = 1746 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttggg 306 ||||||||||||||||||||||| Sbjct: 1355 ttcttctttttcttcttcttggg 1333
>emb|X83872.1|HVDNACREB H.vulgaris mRNA for cAMP response element binding protein Length = 1483 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttggatt 239 ||||||||||||||||||||||| Sbjct: 1445 tttcttcttctttttcttggatt 1423
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 cgccgcttcagtccatgccatgc 72 ||||||||||||||||||||||| Sbjct: 2622577 cgccgcttcagtccatgccatgc 2622599
>emb|CR376754.6| Zebrafish DNA sequence from clone CH211-254O14 in linkage group 2, complete sequence Length = 84275 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 acttcttctttttgcttttcttc 475 ||||||||||||||||||||||| Sbjct: 62819 acttcttctttttgcttttcttc 62841
>emb|BX957352.9| Zebrafish DNA sequence from clone CH211-114O15 in linkage group 23, complete sequence Length = 180880 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttggg 306 ||||||||||||||||||||||| Sbjct: 132620 ttcttctttttcttcttcttggg 132598
>emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in linkage group 10, complete sequence Length = 178736 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttggg 306 ||||||||||||||||||||||| Sbjct: 168382 ttcttctttttcttcttcttggg 168360
>gb|AY680460.1| Macaca mulatta clone ds1_j02_t7_068 succinate dehydrogenase complex subunit C 15 kDa integral membrane protein (SDHC) mRNA, 3' UTR Length = 453 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 216 atttcttcttctttttcttggatttcc 242 ||||||| ||||||||||||||||||| Sbjct: 386 atttctttttctttttcttggatttcc 412
>ref|XM_683055.1| PREDICTED: Danio rerio similar to myristoylated alanine-rich C kinase substrate 2 (LOC572949), mRNA Length = 1587 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 286 cttctttttcttcttcttgggggtctc 312 |||||| |||||||||||||||||||| Sbjct: 493 cttcttcttcttcttcttgggggtctc 467
>emb|BX000467.10| Zebrafish DNA sequence from clone CH211-1K7 in linkage group 19, complete sequence Length = 120440 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 277 atcgcggttcttctttttcttcttctt 303 ||||||||||||||| ||||||||||| Sbjct: 100455 atcgcggttcttcttcttcttcttctt 100481
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 213 tggatttcttcttctttttctt 234 |||||||||||||||||||||| Sbjct: 2061403 tggatttcttcttctttttctt 2061382
>ref|XM_476021.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3621 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 203 ttcttctttttcttcttcttgg 182
>ref|NM_212675.1| Danio rerio eukaryotic translation initiation factor 2, subunit 2 beta (eif2s2), mRNA Length = 1317 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 122 ttcttctttttcttcttcttgg 101
>ref|XM_479549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1271 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 266 ttcttctttttcttcttcttgg 245
>gb|BC106256.1| Xenopus laevis cDNA clone MGC:130708 IMAGE:7979589, complete cds Length = 1473 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 503 ttcttctttttcttcttcttgg 482
>ref|XM_361116.1| Magnaporthe grisea 70-15 hypothetical protein (MG03659.4) partial mRNA Length = 1251 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 210 tcttggatttcttcttcttttt 231 |||||||||||||||||||||| Sbjct: 724 tcttggatttcttcttcttttt 703
>gb|BC071085.1| Xenopus laevis cDNA clone IMAGE:6631258, partial cds Length = 1248 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 149 ttcttctttttcttcttcttgg 128
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 92411 ttcttctttttcttcttcttgg 92432
>gb|AC148920.1| Mus musculus BAC clone RP23-273O10 from chromosome 19, complete sequence Length = 224526 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttcttg 304 |||||||||||||||||||||| Sbjct: 218533 gttcttctttttcttcttcttg 218554
>ref|XM_658363.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5851.2), mRNA Length = 16920 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 9950 ttcttctttttcttcttcttgg 9929
>ref|XM_534598.2| PREDICTED: Canis familiaris similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear dot-associated Sp100 protein) (Lysp100b) (LOC477402), mRNA Length = 2591 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 1869 ttcttctttttcttcttcttgg 1848
>ref|XM_533935.2| PREDICTED: Canis familiaris similar to Transcription initiation factor IIF alpha subunit (TFIIF-alpha) (Transcription initiation factor RAP74) (General transcription factor IIF polypeptide 1 74 kDa subunit protein) (LOC476731), mRNA Length = 1896 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 1055 ttcttctttttcttcttcttgg 1034
>ref|XM_847563.1| PREDICTED: Canis familiaris similar to lung cancer metastasis-related protein 1 homolog (LOC612925), mRNA Length = 761 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 cggttcttctttttcttcttct 302 |||||||||||||||||||||| Sbjct: 697 cggttcttctttttcttcttct 676
>ref|XM_387134.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06958.1) partial mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 cttctttttcttcttcttgggg 307 |||||||||||||||||||||| Sbjct: 432 cttctttttcttcttcttgggg 411
>emb|BX629346.17| Zebrafish DNA sequence from clone DKEY-16N21 in linkage group 6, complete sequence Length = 214213 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 101599 ttcttctttttcttcttcttgg 101578
>ref|XM_792617.1| PREDICTED: Strongylocentrotus purpuratus similar to CG3335-PA (LOC593127), partial mRNA Length = 927 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 374 ttcttctttttcttcttcttgg 353
>emb|BX050957.1|CNS09BHD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC27DD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 835 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 87 ttcttctttttcttcttcttgg 108
>emb|BX021535.1|CNS08OS3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31DG04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 773 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 543 ttcttctttttcttcttcttgg 522
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete sequence Length = 220671 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 23834 ttcttctttttcttcttcttgg 23813
>emb|AL929183.14| Zebrafish DNA sequence from clone CH211-142M8 in linkage group 25, complete sequence Length = 180603 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 tccatgccatgctacattacag 82 |||||||||||||||||||||| Sbjct: 157287 tccatgccatgctacattacag 157266
>gb|BC066706.1| Danio rerio eukaryotic translation initiation factor 2, subunit 2 beta, mRNA (cDNA clone MGC:77084 IMAGE:6960321), complete cds Length = 1317 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 122 ttcttctttttcttcttcttgg 101
>gb|AC153131.5| Mus musculus BAC clone RP24-356O12 from chromosome 19, complete sequence Length = 184864 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttcttg 304 |||||||||||||||||||||| Sbjct: 112032 gttcttctttttcttcttcttg 112053
>ref|XM_692813.1| PREDICTED: Danio rerio similar to Eukaryotic translation initiation factor 2, subunit 2 beta (LOC569429), mRNA Length = 1332 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 167 ttcttctttttcttcttcttgg 146
>ref|XM_625921.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_3450), partial mRNA Length = 8790 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 tcttctttttcttcttcttggg 306 |||||||||||||||||||||| Sbjct: 1491 tcttctttttcttcttcttggg 1470
>gb|BC097508.1| Xenopus laevis cDNA clone IMAGE:5048572, partial cds Length = 1111 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 120 ttcttctttttcttcttcttgg 99
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 29313754 ttcttctttttcttcttcttgg 29313775 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 2755819 ttcttctttttcttcttctt 2755800 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 2164529 ttcttctttttcttcttctt 2164548
>gb|AY737016.1| Oreochromis mossambicus clone Contig11 XNop56 mRNA, partial cds Length = 350 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 605 acctgttcacgcagcttctcaccaaa 630 ||||||||||||||||| |||||||| Sbjct: 154 acctgttcacgcagcttgtcaccaaa 129
>gb|AC084533.1|CBRG22N08 Caenorhabditis briggsae cosmid G22N08, complete sequence Length = 27488 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 25171 ttcttctttttcttcttcttgg 25150
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 66367 ttcttctttttcttcttcttgg 66388
>emb|AJ277097.1|HVU277097 Hordeum vulgare mRNA for putative kinetochore protein (cbf5 gene) Length = 1265 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 211 cttggatttcttcttctttttcttggattt 240 ||||||||| ||||||||||||||||||| Sbjct: 113 cttggatttgctcttctttttcttggattt 84
>dbj|AK099632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P09, full insert sequence Length = 1017 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 542 ttcttctttttcttcttcttgg 521
>dbj|AK073484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042B06, full insert sequence Length = 4187 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 358 ttcttctttttcttcttcttgg 337
>dbj|AK066982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093I07, full insert sequence Length = 1270 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 265 ttcttctttttcttcttcttgg 244
>gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, complete sequence Length = 163408 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 282 ggttcttctttttcttcttctt 303 |||||||||||||||||||||| Sbjct: 55133 ggttcttctttttcttcttctt 55154
>dbj|AK059026.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B10, full insert sequence Length = 471 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 cggttcttctttttcttcttcttggg 306 ||||||||||| |||||||||||||| Sbjct: 259 cggttcttcttcttcttcttcttggg 234
>gb|AY103698.1| Zea mays PCO083605 mRNA sequence Length = 1319 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttgg 305 |||||||||||||||||||||| Sbjct: 197 ttcttctttttcttcttcttgg 176
>emb|AL837525.5| Mouse DNA sequence from clone RP23-233N12 on chromosome 4, complete sequence Length = 15812 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 282 ggttcttctttttcttcttctt 303 |||||||||||||||||||||| Sbjct: 4177 ggttcttctttttcttcttctt 4198
>gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207999 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 19033 gttcttctttttcttcttctt 19053
>gb|BC087358.1| Xenopus laevis cDNA clone IMAGE:7205191 Length = 1136 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 945 ttcttctttttcttcttcttg 925
>gb|AC161382.4| Mus musculus BAC clone RP23-25A17 from chromosome 9, complete sequence Length = 169123 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 47656 ttcttctttttcttcttcttg 47636
>gb|AC163390.2| Mus musculus chromosome 1, clone RP24-300C19, complete sequence Length = 180465 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 134773 ttcttctttttcttcttcttg 134793
>gb|BC082559.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone MGC:100327 IMAGE:30606373), complete cds Length = 1893 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 622 ttcttctttttcttcttcttg 602
>gb|BC044302.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone IMAGE:5137182) Length = 1789 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 519 ttcttctttttcttcttcttg 499
>gb|BC044207.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone IMAGE:5136341), partial cds Length = 1789 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 519 ttcttctttttcttcttcttg 499
>gb|BC025475.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone IMAGE:5352943), partial cds Length = 1622 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 231 ttcttctttttcttcttcttg 211
>gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, complete sequence Length = 194425 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 174986 gttcttctttttcttcttctt 175006 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 174956 gttcttctttttcttcttctt 174976
>ref|XM_641690.1| Dictyostelium discoideum hypothetical protein (DDB0191041), partial mRNA Length = 1983 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 480 ttcttctttttcttcttcttg 460
>ref|XM_636133.1| Dictyostelium discoideum hypothetical protein (DDB0206358), partial mRNA Length = 2457 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 574 gttcttctttttcttcttctt 554
>ref|XM_635401.1| Dictyostelium discoideum hypothetical protein (DDB0204282), partial mRNA Length = 1836 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 1506 ttcttctttttcttcttcttg 1486
>ref|XM_467583.1| Oryza sativa (japonica cultivar-group), mRNA Length = 737 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 248 ttcttctttttcttcttcttg 228
>gb|AC151804.1| Solanum demissum chromosome 5 BAC PGEC475B22 genomic sequence, complete sequence Length = 104138 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 20671 gttcttctttttcttcttctt 20651
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 27225 ttcttctttttcttcttcttg 27205
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 539568 ttcttctttttcttcttcttg 539548
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 966408 ttcttctttttcttcttcttg 966388
>gb|AC008196.8| Drosophila melanogaster clone BACR30J14, complete sequence Length = 179562 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 48083 gttcttctttttcttcttctt 48103
>ref|XM_366910.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02986.4) partial mRNA Length = 5349 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 282 ggttcttctttttcttcttcttggg 306 |||||||||| |||||||||||||| Sbjct: 5038 ggttcttcttcttcttcttcttggg 5014
>ref|XM_957409.1| Neurospora crassa OR74A hypothetical protein (NCU08289.1) partial mRNA Length = 3402 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1332 gttcttctttttcttcttctt 1312
>ref|XM_328994.1| Neurospora crassa OR74A hypothetical protein (NCU08289.1) partial mRNA Length = 3402 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1332 gttcttctttttcttcttctt 1312
>gb|AY614011.1| Pelmatohydra robusta mRNA 5' cap-methyltransferase (CnCMT) mRNA, complete cds Length = 2164 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 209 gttcttctttttcttcttctt 189
>gb|BC068393.1| Danio rerio cDNA clone IMAGE:6961702, partial cds Length = 2411 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 123 ttcttctttttcttcttcttg 103 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 297 ttcttctttttcttcttctt 278
>gb|AC133089.4| Mus musculus BAC clone RP24-165M3 from chromosome 19, complete sequence Length = 149637 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 tcttctttttcttcttcttgg 305 ||||||||||||||||||||| Sbjct: 61154 tcttctttttcttcttcttgg 61134
>ref|XM_980768.1| PREDICTED: Mus musculus neuron navigator 3 (Nav3), mRNA Length = 7713 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 5037 tttcttcttctttttcttgga 5017
>ref|XM_001003696.1| PREDICTED: Mus musculus similar to neuron navigator 3, transcript variant 3 (LOC676640), mRNA Length = 4331 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 221 tttcttcttctttttcttgga 201
>ref|XM_001003704.1| PREDICTED: Mus musculus similar to neuron navigator 3, transcript variant 4 (LOC676640), mRNA Length = 9133 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 5023 tttcttcttctttttcttgga 5003
>ref|XM_001003712.1| PREDICTED: Mus musculus similar to neuron navigator 3, transcript variant 5 (LOC676640), mRNA Length = 9857 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 5023 tttcttcttctttttcttgga 5003
>ref|XM_001003689.1| PREDICTED: Mus musculus similar to neuron navigator 3, transcript variant 2 (LOC676640), mRNA Length = 7782 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 5106 tttcttcttctttttcttgga 5086
>ref|XM_001004140.1| PREDICTED: Mus musculus RIKEN cDNA 9630020C08 gene, transcript variant 3 (9630020C08Rik), mRNA Length = 4331 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 221 tttcttcttctttttcttgga 201
>ref|XM_001004137.1| PREDICTED: Mus musculus RIKEN cDNA 9630020C08 gene, transcript variant 2 (9630020C08Rik), mRNA Length = 7782 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 5106 tttcttcttctttttcttgga 5086
>ref|XM_745341.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g06850) partial mRNA Length = 2187 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 285 gttcttctttttcttcttctt 265
>ref|XM_389573.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09397.1) partial mRNA Length = 1695 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 182 ttcttctttttcttcttcttg 162
>ref|XM_389429.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09253.1) partial mRNA Length = 1572 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 cggttcttctttttcttcttc 301 ||||||||||||||||||||| Sbjct: 584 cggttcttctttttcttcttc 564
>ref|XM_569941.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNC03030) partial mRNA Length = 1830 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 1404 ttcttctttttcttcttcttg 1384
>ref|XM_572993.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI01950) partial mRNA Length = 1116 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 152 ttcttctttttcttcttcttg 132
>ref|XM_568517.1| Cryptococcus neoformans var. neoformans JEC21 glycylpeptide N-tetradecanoyltransferase (CNN00080) partial mRNA Length = 1876 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 230 ttcttctttttcttcttcttg 210
>gb|AC121786.3| Mus musculus BAC clone RP23-387F9 from chromosome 2, complete sequence Length = 208632 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 87587 ttcttctttttcttcttcttg 87607
>gb|AY142087.1| Borrelia burgdorferi strain N40 plasmid group cp32-10 Erp26 protein (erp26) gene, complete cds Length = 1290 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 341 ttcttctttttcttcttcttg 321
>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence Length = 214405 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 15701 gttcttctttttcttcttctt 15681
>gb|AC100752.10| Mus musculus chromosome 3, clone RP23-2A4, complete sequence Length = 208757 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 114736 gttcttctttttcttcttctt 114756
>emb|CR720005.2|CNS0GII3 Tetraodon nigroviridis full-length cDNA Length = 1764 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 tcttggatttcttcttctttttctt 234 ||||||||||||| ||||||||||| Sbjct: 374 tcttggatttctttttctttttctt 350
>emb|CR716569.2|CNS0GFUQ Tetraodon nigroviridis full-length cDNA Length = 351 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 139 gttcttctttttcttcttctt 119
>emb|CR697488.2|CNS0G14S Tetraodon nigroviridis full-length cDNA Length = 1645 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 tcttggatttcttcttctttttctt 234 ||||||||||||| ||||||||||| Sbjct: 253 tcttggatttctttttctttttctt 229
>emb|CR696725.2|CNS0G0JL Tetraodon nigroviridis full-length cDNA Length = 1766 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 tcttggatttcttcttctttttctt 234 ||||||||||||| ||||||||||| Sbjct: 372 tcttggatttctttttctttttctt 348
>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence Length = 236895 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 147077 tttcttcttctttttcttgga 147057
>emb|AL353742.23| Human DNA sequence from clone RP11-505C13 on chromosome 9q31.1-32 Contains part of a novel gene, complete sequence Length = 157657 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 439 agcctcagctttggacttcttcttt 463 ||||||||||||||||||| ||||| Sbjct: 75487 agcctcagctttggacttcctcttt 75463
>ref|XM_788664.1| PREDICTED: Strongylocentrotus purpuratus similar to activating transcription factor 6 (LOC589006), mRNA Length = 1869 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 cgcggttcttctttttcttcttctt 303 |||| |||||||||||||||||||| Sbjct: 1342 cgcgcttcttctttttcttcttctt 1318
>ref|XM_788091.1| PREDICTED: Strongylocentrotus purpuratus similar to mediator of RNA polymerase II transcription, subunit 19 homolog (LOC588405), mRNA Length = 1143 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 656 ttcttctttttcttcttcttg 636
>emb|BX011696.1|CNS08H6S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA18CG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 106 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttggggg 308 |||||||| |||||||||||||||| Sbjct: 15 ttcttcttcttcttcttcttggggg 39
>ref|XM_778473.1| PREDICTED: Strongylocentrotus purpuratus similar to CG6066-PA (LOC578296), mRNA Length = 971 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 tcttggatttcttcttctttttctt 234 |||| |||||||||||||||||||| Sbjct: 318 tctttgatttcttcttctttttctt 294
>ref|NM_001011242.1| Xenopus tropicalis retinitis pigmentosa 9 (autosomal dominant) (rp9), mRNA Length = 1107 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 678 ttcttctttttcttcttcttg 658
>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10 Length = 161126 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 27714 gttcttctttttcttcttctt 27734
>emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 30 Length = 198136 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 127009 gttcttctttttcttcttctt 126989
>emb|AL049525.1|ATF25I24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25I24 (ESSA project) Length = 95799 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 45985 gttcttctttttcttcttctt 45965
>emb|AJ294815.1|MYA294815 Tapesia yallundae tyg1 gene for G protein alpha subunit, exons 1-4 Length = 3733 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 2337 ttcttctttttcttcttcttg 2317
>emb|AL606522.6| Mouse DNA sequence from clone RP23-19L22 on chromosome 11 Contains the Actr2 gene for ARP2 actin-related protein 2 homolog (yeast), a small nuclear ribonucleoprotein polypeptide G (Snrpg) pseudogene, two novel genes, the Rab1 gene for RAB1, member RAS oncogene family and three CpG islands, complete sequence Length = 203071 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 155058 gttcttctttttcttcttctt 155038
>emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chromosome 4 Contains a ribosomal protein 7a (Rpl7a) pseudogene, complete sequence Length = 161600 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 210 tcttggatttcttcttctttttcttggatttcc 242 ||||| ||||||||||||| |||||| |||||| Sbjct: 59235 tcttgcatttcttcttcttcttcttgcatttcc 59267
>emb|CR376729.7| Zebrafish DNA sequence from clone CH211-282K21 in linkage group 8, complete sequence Length = 39033 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 9856 gttcttctttttcttcttctt 9836
>gb|AC023712.5| Drosophila melanogaster X BAC RP98-1M22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170129 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 11846 ttcttctttttcttcttcttg 11866
>dbj|AK222455.1| Ciona intestinalis mRNA for translation initiation factor, complete cds, clone: cicl002k15 Length = 1538 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 158 ttcttctttttcttcttcttg 138
>ref|NM_199640.1| Danio rerio methionyl aminopeptidase 2 (metap2), mRNA Length = 2462 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 161 ttcttctttttcttcttcttg 141
>emb|X60437.2|DSPTEH2 Drosophila subobscura Dnop56 gene and P transposable element (pDsG22) Length = 4881 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 2279 gttcttctttttcttcttctt 2259
>gb|AC023720.4| Drosophila melanogaster X BAC RP98-7F15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179205 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cttctttttcttcttcttggg 306 ||||||||||||||||||||| Sbjct: 5047 cttctttttcttcttcttggg 5027
>gb|AC023692.5| Drosophila melanogaster X BAC RP98-15B10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163090 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 39103 ttcttctttttcttcttcttg 39083
>emb|BX088710.15| Zebrafish DNA sequence from clone DKEY-3L5 in linkage group 18, complete sequence Length = 101016 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 92734 gttcttctttttcttcttctt 92714
>gb|AC023682.4| Drosophila melanogaster X BAC RP98-7F10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179236 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cttctttttcttcttcttggg 306 ||||||||||||||||||||| Sbjct: 142430 cttctttttcttcttcttggg 142410
>gb|BC055563.1| Danio rerio methionyl aminopeptidase 2, mRNA (cDNA clone MGC:66250 IMAGE:3819580), complete cds Length = 2462 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 161 ttcttctttttcttcttcttg 141
>ref|NM_166094.1| Drosophila melanogaster SRPK CG8174-RC, transcript variant C (SRPK), mRNA Length = 4483 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1123 gttcttctttttcttcttctt 1103
>ref|NM_166093.1| Drosophila melanogaster SRPK CG8174-RA, transcript variant A (SRPK), mRNA Length = 5137 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1771 gttcttctttttcttcttctt 1751
>ref|NM_142783.2| Drosophila melanogaster Nop56 CG13849-RA (Nop56), mRNA Length = 1746 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1576 gttcttctttttcttcttctt 1556
>ref|NM_137190.2| Drosophila melanogaster SRPK CG8174-RB, transcript variant B (SRPK), mRNA Length = 4977 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1611 gttcttctttttcttcttctt 1591
>dbj|AB128125.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:ACC1645 Length = 163 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 117 gttcttctttttcttcttctt 97
>dbj|AB128124.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:Tochigi enba No.1 Length = 165 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 119 gttcttctttttcttcttctt 99
>dbj|AB128123.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:ACC2331 Length = 167 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 121 gttcttctttttcttcttctt 101
>dbj|AB128122.1| Vigna angularis DNA, microsatellite locus CEDG029, isolate:Bato08 Length = 169 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 123 gttcttctttttcttcttctt 103
>dbj|AB128121.1| Vigna angularis DNA, microsatellite locus CEDG029, isolate:Bato06 Length = 183 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 137 gttcttctttttcttcttctt 117
>dbj|AB128120.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:Erimoshouzu Length = 189 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 143 gttcttctttttcttcttctt 123
>dbj|AB128119.1| Vigna angularis DNA, microsatellite locus CEDG029, isolate:Bato04 Length = 191 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 145 gttcttctttttcttcttctt 125
>dbj|AB128118.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:ACC2334 Length = 193 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 147 gttcttctttttcttcttctt 127
>ref|NM_079319.2| Drosophila melanogaster Eukaryotic initiation factor 2 CG4153-RA (eIF-2beta), mRNA Length = 1136 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 340 ttcttctttttcttcttcttg 320
>gb|AC024600.5| Homo sapiens chromosome 10 clone RP11-179K3, complete sequence Length = 147878 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 tcttggatttcttcttctttt 230 ||||||||||||||||||||| Sbjct: 128950 tcttggatttcttcttctttt 128970
>gb|AC098487.1| Homo sapiens BAC clone RP11-499E18 from 4, complete sequence Length = 163914 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 159633 gttcttctttttcttcttctt 159613
>gb|AE010192.1| Pyrococcus furiosus DSM 3638, section 67 of 173 of the complete genome Length = 11947 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 aagggctaaaagaggctcacagagt 115 ||||||||||||||||| ||||||| Sbjct: 6734 aagggctaaaagaggcttacagagt 6710
>ref|XM_704119.1| PREDICTED: Danio rerio similar to Heat shock protein HSP 90-alpha (HSP 86), transcript variant 3 (LOC565155), mRNA Length = 2520 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 973 ttcttctttttcttcttcttg 953
>ref|XM_683871.1| PREDICTED: Danio rerio similar to Heat shock protein HSP 90-alpha (HSP 86), transcript variant 1 (LOC565155), mRNA Length = 2562 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 934 ttcttctttttcttcttcttg 914
>ref|XM_704118.1| PREDICTED: Danio rerio similar to Heat shock protein HSP 90-alpha (HSP 86), transcript variant 2 (LOC565155), mRNA Length = 2601 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 973 ttcttctttttcttcttcttg 953
>dbj|AK168787.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920055E05 product:Hypothetical proline-rich region/Bipartite nuclear localization signal containing protein, full insert sequence Length = 1873 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 625 ttcttctttttcttcttcttg 605
>ref|XM_682791.1| PREDICTED: Danio rerio similar to heat shock protein 90-alpha (LOC559452), mRNA Length = 2930 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 2608 ttcttctttttcttcttcttg 2588
>ref|XM_696969.1| PREDICTED: Danio rerio hypothetical protein LOC554501 (LOC554501), mRNA Length = 2426 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 163 ttcttctttttcttcttcttg 143 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 337 ttcttctttttcttcttctt 318
>dbj|AK160579.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410170P04 product:Hypothetical proline-rich region/Bipartite nuclear localization signal containing protein, full insert sequence Length = 1544 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 623 ttcttctttttcttcttcttg 603
>gb|AF223353.1|AF223353 Drosophila melanogaster nucleolar KKE/D repeat protein (Nop56) mRNA, complete cds Length = 1756 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1564 gttcttctttttcttcttctt 1544
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 94963 ttcttctttttcttcttcttg 94983
>dbj|AK010552.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410018M14 product:hypothetical Proline-rich region/Bipartite nuclear localization signal containing protein, full insert sequence Length = 2036 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 635 ttcttctttttcttcttcttg 615
>gb|AY051644.1| Drosophila melanogaster GM14238 full length cDNA Length = 914 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 722 gttcttctttttcttcttctt 702
>gb|AF047663.3| Caenorhabditis elegans cosmid W09G12, complete sequence Length = 32179 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttctt 474 ||||||||||||||||||||| Sbjct: 27335 cttcttctttttgcttttctt 27315
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 486 caccattctctttgccgtcatcatc 510 ||||||||||||||||| ||||||| Sbjct: 2881626 caccattctctttgccgccatcatc 2881650
>dbj|AK005399.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600002M17 product:RIKEN cDNA 2410018M14 gene, full insert sequence Length = 1209 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 625 ttcttctttttcttcttcttg 605
>ref|NM_067656.1| Caenorhabditis elegans W09G12.7 (W09G12.7) mRNA, complete cds Length = 1107 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 cttcttctttttgcttttctt 474 ||||||||||||||||||||| Sbjct: 306 cttcttctttttgcttttctt 286
>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete sequence Length = 287397 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 285508 gttcttctttttcttcttctt 285528
>gb|BC055404.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone IMAGE:5009533) Length = 660 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 612 ttcttctttttcttcttcttg 592
>gb|AC115748.8| Mus musculus chromosome 1, clone RP23-13N24, complete sequence Length = 202092 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 199708 ttcttctttttcttcttcttg 199688
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ccatgccatgctacattacag 82 ||||||||||||||||||||| Sbjct: 15950929 ccatgccatgctacattacag 15950949
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 30296890 ttcttctttttcttcttcttg 30296910
>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone BACR03D24, complete sequence Length = 158402 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 34896 gttcttctttttcttcttctt 34876
>gb|AF024682.1| Drosophila guanche P element cluster, partial sequence Length = 1732 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 553 gttcttctttttcttcttctt 533
>gb|AF301149.1|AF301149 Drosophila melanogaster SR protein kinase 1 mRNA, complete cds Length = 2368 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1395 gttcttctttttcttcttctt 1375
>gb|AC092672.3| Homo sapiens BAC clone RP11-603F24 from 2, complete sequence Length = 80521 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 34169 gttcttctttttcttcttctt 34149
>gb|AC009236.4| Homo sapiens BAC clone RP11-421J10 from 2, complete sequence Length = 178911 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 113294 ttcttctttttcttcttcttg 113274
>gb|AC084645.1|CBRG45L11 Caenorhabditis briggsae cosmid G45L11, complete sequence Length = 41337 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 26778 ttcttctttttcttcttcttg 26758
>gb|AC069120.9| Homo sapiens chromosome 8, clone RP11-675F6, complete sequence Length = 161198 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 cttggatttcttcttcttttt 231 ||||||||||||||||||||| Sbjct: 39676 cttggatttcttcttcttttt 39696
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 233098 gttcttctttttcttcttctt 233118
>ref|NM_025885.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast) (Med19), mRNA Length = 2036 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 635 ttcttctttttcttcttcttg 615
>gb|AY060459.1| Drosophila melanogaster SD03158 full insert cDNA Length = 3428 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 48 gttcttctttttcttcttctt 28
>gb|AE001581.1| Borrelia burgdorferi B31 plasmid cp32-9, complete sequence Length = 30651 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 27010 ttcttctttttcttcttcttg 26990
>gb|AC016813.20| Homo sapiens chromosome 8, clone RP11-495O10, complete sequence Length = 183568 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 cttggatttcttcttcttttt 231 ||||||||||||||||||||| Sbjct: 138442 cttggatttcttcttcttttt 138462
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 448 tttggacttcttctttttgcttttc 472 |||||||||||||||||| |||||| Sbjct: 761587 tttggacttcttcttttttcttttc 761611
>gb|AC153890.8| Mus musculus BAC RP23-403C13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202932 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 146358 ttcttctttttcttcttcttg 146378
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 97807 ttcttctttttcttcttcttg 97827
>dbj|AK121427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136B21, full insert sequence Length = 737 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 248 ttcttctttttcttcttcttg 228
>gb|AC153978.5| Mus musculus 10 BAC RP24-217I1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172497 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 129625 gttcttctttttcttcttctt 129645
>gb|AF156667.1|AF156667 Vigna radiata RNA helicase (VRH1) mRNA, complete cds Length = 2340 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 314 ttcttctttttcttcttcttg 294
>gb|AF213884.1|AF213884S1 Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (NFKB1) gene, complete cds Length = 190000 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 18882 gttcttctttttcttcttctt 18862
>dbj|AK110375.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-C04, full insert sequence Length = 3312 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 3162 ttcttctttttcttcttcttg 3142
>gb|AC174163.2| Gallus gallus BAC clone CH261-69O1 from chromosome ul, complete sequence Length = 178322 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 7743 ttcttctttttcttcttcttg 7763
>emb|CT030184.14| Mouse DNA sequence from clone RP23-9C19 on chromosome 13, complete sequence Length = 201341 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cttctttttcttcttcttggg 306 ||||||||||||||||||||| Sbjct: 67396 cttctttttcttcttcttggg 67376
>emb|CR381646.8| Zebrafish DNA sequence from clone DKEY-241L7 in linkage group 20, complete sequence Length = 183151 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 71411 ttcttctttttcttcttcttg 71391
>gb|AC007967.3|AC007967 Homo sapiens clone NH0373F14, complete sequence Length = 187547 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 86629 ttcttctttttcttcttcttg 86609
>emb|CR761073.2| Xenopus tropicalis finished cDNA, clone TEgg032c10 Length = 990 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 665 ttcttctttttcttcttcttg 645
>gb|AE003811.3| Drosophila melanogaster chromosome 2R, section 39 of 73 of the complete sequence Length = 255652 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 230740 gttcttctttttcttcttctt 230720
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 215115 ttcttctttttcttcttcttg 215135
>gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 of 74 of the complete sequence Length = 317322 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cttctttttcttcttcttggg 306 ||||||||||||||||||||| Sbjct: 134203 cttctttttcttcttcttggg 134223
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 172547 ttcttctttttcttcttcttg 172567
>emb|CT486003.10| Mouse DNA sequence from clone RP23-415F11 on chromosome 14, complete sequence Length = 181037 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 143523 gttcttctttttcttcttctt 143543 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 18603 ttcttctttttcttcttctt 18584
>dbj|AK122404.1| Mus musculus mRNA for mKIAA0938 protein Length = 6371 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tttcttcttctttttcttgga 237 ||||||||||||||||||||| Sbjct: 2937 tttcttcttctttttcttgga 2917
>gb|BT001613.1| Drosophila melanogaster RE33426 full insert cDNA Length = 1767 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 1576 gttcttctttttcttcttctt 1556
>emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in linkage group 7, complete sequence Length = 239497 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 29421 gttcttctttttcttcttctt 29441
>emb|CT033751.4| Mouse DNA sequence from clone RP24-236O3 on chromosome 17, complete sequence Length = 171391 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 668 gaagcaatggaacatttgtttgcca 692 |||| |||||||||||||||||||| Sbjct: 80209 gaaggaatggaacatttgtttgcca 80185
>gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12 Length = 103673 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 57739 gttcttctttttcttcttctt 57759
>emb|AL929079.14| Mouse DNA sequence from clone RP23-387F9 on chromosome 2, complete sequence Length = 120316 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 86902 ttcttctttttcttcttcttg 86882
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ccatgccatgctacattacag 82 ||||||||||||||||||||| Sbjct: 15904162 ccatgccatgctacattacag 15904182
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ccatgccatgctacattacag 82 ||||||||||||||||||||| Sbjct: 18342 ccatgccatgctacattacag 18362
>emb|CT030166.8| Mouse DNA sequence from clone RP23-320I11 on chromosome 13, complete sequence Length = 222942 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cttctttttcttcttcttggg 306 ||||||||||||||||||||| Sbjct: 210618 cttctttttcttcttcttggg 210598
>gb|BC087814.1| Xenopus tropicalis retinitis pigmentosa 9 (autosomal dominant), mRNA (cDNA clone MGC:108496 IMAGE:7004979), complete cds Length = 1107 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 678 ttcttctttttcttcttcttg 658
>gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, complete sequence Length = 185681 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 64864 gttcttctttttcttcttctt 64884
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 109560 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ggttcttctttttcttcttct 302 ||||||||||||||||||||| Sbjct: 18668 ggttcttctttttcttcttct 18688
>emb|Z83316.1|CEB0379 Caenorhabditis elegans Cosmid B0379, complete sequence Length = 40339 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 28424 gttcttctttttcttcttctt 28404
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 128889 ttcttctttttcttcttcttg 128909
>dbj|AP004976.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09L18, TM0159, complete sequence Length = 91722 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 27366 ttcttctttttcttcttcttg 27386
>gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HBa0256E08, complete sequence Length = 147630 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 74682 ttcttctttttcttcttcttg 74662
>emb|AL607030.15| Mouse DNA sequence from clone RP23-304O12 on chromosome 11, complete sequence Length = 189236 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 142498 gttcttctttttcttcttctt 142518
>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete sequence Length = 227993 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttggggg 308 |||||||||||||||||||| |||| Sbjct: 167786 ttcttctttttcttcttcttcgggg 167810
>emb|AL929066.7| Mouse DNA sequence from clone RP23-68E1 on chromosome 2, complete sequence Length = 210907 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gttcttctttttcttcttctt 303 ||||||||||||||||||||| Sbjct: 105053 gttcttctttttcttcttctt 105073
>gb|L19197.1|DROEIF2BET Drosophila melanogaster eIF-2 beta-subunit mRNA, complete cds Length = 1099 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 305 ttcttctttttcttcttcttg 285
>dbj|AP003480.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970H2 Length = 150331 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 ttcttctttttgcttttcttc 475 ||||||||||||||||||||| Sbjct: 27304 ttcttctttttgcttttcttc 27284
>emb|AL596263.8| Mouse DNA sequence from clone RP23-392O2 on chromosome 2, complete sequence Length = 100060 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttcttg 304 ||||||||||||||||||||| Sbjct: 76726 ttcttctttttcttcttcttg 76746
>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence Length = 180227 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 135657 ttcttctttttcttcttctt 135676
>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence Length = 156835 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 69195 ttcttctttttcttcttctt 69214 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 69183 ttcttctttttcttcttctt 69202 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 69171 ttcttctttttcttcttctt 69190
>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence Length = 203580 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 75739 ttcttctttttcttcttctt 75758 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 75709 ttcttctttttcttcttctt 75728
>gb|BC032416.1| Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:5215215), complete cds Length = 2267 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 998 ttcttctttttcttcttctt 979
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 145304 ttcttctttttcttcttctt 145285
>gb|AC104554.7| Mus musculus chromosome 5, clone RP24-441E22, complete sequence Length = 176408 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 153625 ttcttctttttcttcttctt 153606 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 153524 ttcttctttttcttcttctt 153505
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gttcttctttttcttcttct 302 |||||||||||||||||||| Sbjct: 13278 gttcttctttttcttcttct 13259
>gb|AC116696.20| Mus musculus chromosome 3, clone RP24-425N23, complete sequence Length = 168053 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 122551 ttcttctttttcttcttctt 122570
>gb|AC153879.1| Mus musculus BAC RP23-264C21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182252 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 20791 ttcttctttttcttcttctt 20772
>gb|AC119832.9| Mus musculus chromosome 3, clone RP23-471I16, complete sequence Length = 178681 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 103712 ttcttctttttcttcttctt 103731
>gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250801 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 34095 ttcttctttttcttcttctt 34114
>ref|NM_053424.1| Rattus norvegicus solute carrier family 4, member 4 (Slc4a4), mRNA Length = 3573 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ttcttctttttcttcttctt 303 |||||||||||||||||||| Sbjct: 3124 ttcttctttttcttcttctt 3105 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,035,946 Number of Sequences: 3902068 Number of extensions: 9035946 Number of successful extensions: 801675 Number of sequences better than 10.0: 2654 Number of HSP's better than 10.0 without gapping: 2665 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 712971 Number of HSP's gapped (non-prelim): 88704 length of query: 702 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 679 effective length of database: 17,143,297,704 effective search space: 11640299141016 effective search space used: 11640299141016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)