| Clone Name | rbaal2c18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033049N14, full insert sequence Length = 1780 Score = 404 bits (204), Expect = e-109 Identities = 477/568 (83%) Strand = Plus / Minus Query: 176 agcagctgttgcaacaagcgagctgcaaggcgctgggagacacctcctgcgatacgagaa 235 |||||||| ||||||| ||| || || |||||||| | ||||||||||| | || || Sbjct: 1556 agcagctgctgcaacaggcgggccgcgaggcgctgcgtaacacctcctgcaacccgggag 1497 Query: 236 ccaaacacacgggcttcacgctcttgtagcacctgtacaattggctgcaaaagacttgga 295 |||| || ||||| || |||||||||||||||| |||||||| ||||| | |||| Sbjct: 1496 ccaagaacgcgggcctctggctcttgtagcacctgcacaattggttgcaagatggttggg 1437 Query: 296 tcaaaggtatcagaggatctcaaaagaccccatattctgagaacagtgtctcgtagctcc 355 |||||| ||| |||||||||| ||| ||||||||||||| ||| |||| || ||||| Sbjct: 1436 tcaaagccatccgaggatctcagaaggccccatattctgaaaaccctgtcccgcagctca 1377 Query: 356 aacatttgttcccgctcaacatcacttatcttaaagggtccagctgggtttccattggat 415 | ||||||||||| ||| || |||||||| || ||||| ||||| || ||| ||||| Sbjct: 1376 atcatttgttccctttcagtgtcgcttatcttgaacggtccggctggattaccactggat 1317 Query: 416 attaatggcttcaaaaattctggagctgcattgtatgaaccaatcagtgttccaaaggtg 475 |||||||| || | |||||||||||||||||| || ||| ||||||| |||||||| ||| Sbjct: 1316 attaatggtttaagaaattctggagctgcattatacgaatcaatcagcgttccaaaagtg 1257 Query: 476 atggcttctgtgacacgaaccgcttctttcacaacaagcacccttaaattctccccatct 535 ||||||||||||||||||||||||||||||||||| || || | || | ||||||||| Sbjct: 1256 atggcttctgtgacacgaaccgcttctttcacaactaggactcgcaattcctccccatca 1197 Query: 536 ggaccaagtagaagtttcaaaaccggttgtagcgcatccttcgctacaaactctctatcc 595 |||||||||||||| || | ||| ||||| | ||||| || ||| ||||||||||||| Sbjct: 1196 ggaccaagtagaagctttagaactggttgcaaagcatcttttgctgcaaactctctatct 1137 Query: 596 tggcgtccttgaacaagaagattttcaagcctattccacctgaatttttcatccttgaat 655 |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1136 tggctcccttgaacaagaagattttcaagcctattccatctgaattttccatccttgaat 1077 Query: 656 agcagctcaatcagagcatctctgagatatggattgggatctgtgagtaatcttttagca 715 || |||||||| | ||||||||||||||||||||||||||| ||||||| ||||| ||| Sbjct: 1076 agtagctcaattaaagcatctctgagatatggattgggatcagtgagtagccttttcgca 1017 Query: 716 aagtaaggatatgaggcagcaagcacct 743 |||||||| || |||||||| ||||||| Sbjct: 1016 aagtaagggtacgaggcagcgagcacct 989
>dbj|AK059093.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C02, full insert sequence Length = 1302 Score = 404 bits (204), Expect = e-109 Identities = 477/568 (83%) Strand = Plus / Minus Query: 176 agcagctgttgcaacaagcgagctgcaaggcgctgggagacacctcctgcgatacgagaa 235 |||||||| ||||||| ||| || || |||||||| | ||||||||||| | || || Sbjct: 1173 agcagctgctgcaacaggcgggccgcgaggcgctgcgtaacacctcctgcaacccgggag 1114 Query: 236 ccaaacacacgggcttcacgctcttgtagcacctgtacaattggctgcaaaagacttgga 295 |||| || ||||| || |||||||||||||||| |||||||| ||||| | |||| Sbjct: 1113 ccaagaacgcgggcctctggctcttgtagcacctgcacaattggttgcaagatggttggg 1054 Query: 296 tcaaaggtatcagaggatctcaaaagaccccatattctgagaacagtgtctcgtagctcc 355 |||||| ||| |||||||||| ||| ||||||||||||| ||| |||| || ||||| Sbjct: 1053 tcaaagccatccgaggatctcagaaggccccatattctgaaaaccctgtcccgcagctca 994 Query: 356 aacatttgttcccgctcaacatcacttatcttaaagggtccagctgggtttccattggat 415 | ||||||||||| ||| || |||||||| || ||||| ||||| || ||| ||||| Sbjct: 993 atcatttgttccctttcagtgtcgcttatcttgaacggtccggctggattaccactggat 934 Query: 416 attaatggcttcaaaaattctggagctgcattgtatgaaccaatcagtgttccaaaggtg 475 |||||||| || | |||||||||||||||||| || ||| ||||||| |||||||| ||| Sbjct: 933 attaatggtttaagaaattctggagctgcattatacgaatcaatcagcgttccaaaagtg 874 Query: 476 atggcttctgtgacacgaaccgcttctttcacaacaagcacccttaaattctccccatct 535 ||||||||||||||||||||||||||||||||||| || || | || | ||||||||| Sbjct: 873 atggcttctgtgacacgaaccgcttctttcacaactaggactcgcaattcctccccatca 814 Query: 536 ggaccaagtagaagtttcaaaaccggttgtagcgcatccttcgctacaaactctctatcc 595 |||||||||||||| || | ||| ||||| | ||||| || ||| ||||||||||||| Sbjct: 813 ggaccaagtagaagctttagaactggttgcaaagcatcttttgctgcaaactctctatct 754 Query: 596 tggcgtccttgaacaagaagattttcaagcctattccacctgaatttttcatccttgaat 655 |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 753 tggctcccttgaacaagaagattttcaagcctattccatctgaattttccatccttgaat 694 Query: 656 agcagctcaatcagagcatctctgagatatggattgggatctgtgagtaatcttttagca 715 || |||||||| | ||||||||||||||||||||||||||| ||||||| ||||| ||| Sbjct: 693 agtagctcaattaaagcatctctgagatatggattgggatcagtgagtagccttttcgca 634 Query: 716 aagtaaggatatgaggcagcaagcacct 743 |||||||| || |||||||| ||||||| Sbjct: 633 aagtaagggtacgaggcagcgagcacct 606
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03, complete sequence Length = 146278 Score = 254 bits (128), Expect = 4e-64 Identities = 308/368 (83%) Strand = Plus / Minus Query: 266 acctgtacaattggctgcaaaagacttggatcaaaggtatcagaggatctcaaaagaccc 325 ||||| |||||||| ||||| | |||| |||||| ||| |||||||||| ||| ||| Sbjct: 61803 acctgcacaattggttgcaagatggttgggtcaaagccatccgaggatctcagaaggccc 61744 Query: 326 catattctgagaacagtgtctcgtagctccaacatttgttcccgctcaacatcacttatc 385 |||||||||| ||| |||| || ||||| | ||||||||||| ||| || |||||| Sbjct: 61743 catattctgaaaaccctgtcccgcagctcaatcatttgttccctttcagtgtcgcttatc 61684 Query: 386 ttaaagggtccagctgggtttccattggatattaatggcttcaaaaattctggagctgca 445 || || ||||| ||||| || ||| ||||||||||||| || | |||||||||||||||| Sbjct: 61683 ttgaacggtccggctggattaccactggatattaatggtttaagaaattctggagctgca 61624 Query: 446 ttgtatgaaccaatcagtgttccaaaggtgatggcttctgtgacacgaaccgcttctttc 505 || || ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61623 ttatacgaatcaatcagcgttccaaaagtgatggcttctgtgacacgaaccgcttctttc 61564 Query: 506 acaacaagcacccttaaattctccccatctggaccaagtagaagtttcaaaaccggttgt 565 ||||| || || | || | ||||||||| |||||||||||||| || | ||| ||||| Sbjct: 61563 acaactaggactcgcaattcctccccatcaggaccaagtagaagctttagaactggttgc 61504 Query: 566 agcgcatccttcgctacaaactctctatcctggcgtccttgaacaagaagattttcaagc 625 | ||||| || ||| ||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 61503 aaagcatcttttgctgcaaactctctatcttggctcccttgaacaagaagattttcaagc 61444 Query: 626 ctattcca 633 |||||||| Sbjct: 61443 ctattcca 61436 Score = 131 bits (66), Expect = 4e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 634 cctgaatttttcatccttgaatagcagctcaatcagagcatctctgagatatggattggg 693 |||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||| Sbjct: 61320 cctgaattttccatccttgaatagtagctcaattaaagcatctctgagatatggattggg 61261 Query: 694 atctgtgagtaatcttttagcaaagtaaggatatgaggcagcaagcacct 743 ||| ||||||| ||||| ||||||||||| || |||||||| ||||||| Sbjct: 61260 atcagtgagtagccttttcgcaaagtaagggtacgaggcagcgagcacct 61211
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 254 bits (128), Expect = 4e-64 Identities = 308/368 (83%) Strand = Plus / Minus Query: 266 acctgtacaattggctgcaaaagacttggatcaaaggtatcagaggatctcaaaagaccc 325 ||||| |||||||| ||||| | |||| |||||| ||| |||||||||| ||| ||| Sbjct: 14910887 acctgcacaattggttgcaagatggttgggtcaaagccatccgaggatctcagaaggccc 14910828 Query: 326 catattctgagaacagtgtctcgtagctccaacatttgttcccgctcaacatcacttatc 385 |||||||||| ||| |||| || ||||| | ||||||||||| ||| || |||||| Sbjct: 14910827 catattctgaaaaccctgtcccgcagctcaatcatttgttccctttcagtgtcgcttatc 14910768 Query: 386 ttaaagggtccagctgggtttccattggatattaatggcttcaaaaattctggagctgca 445 || || ||||| ||||| || ||| ||||||||||||| || | |||||||||||||||| Sbjct: 14910767 ttgaacggtccggctggattaccactggatattaatggtttaagaaattctggagctgca 14910708 Query: 446 ttgtatgaaccaatcagtgttccaaaggtgatggcttctgtgacacgaaccgcttctttc 505 || || ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14910707 ttatacgaatcaatcagcgttccaaaagtgatggcttctgtgacacgaaccgcttctttc 14910648 Query: 506 acaacaagcacccttaaattctccccatctggaccaagtagaagtttcaaaaccggttgt 565 ||||| || || | || | ||||||||| |||||||||||||| || | ||| ||||| Sbjct: 14910647 acaactaggactcgcaattcctccccatcaggaccaagtagaagctttagaactggttgc 14910588 Query: 566 agcgcatccttcgctacaaactctctatcctggcgtccttgaacaagaagattttcaagc 625 | ||||| || ||| ||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 14910587 aaagcatcttttgctgcaaactctctatcttggctcccttgaacaagaagattttcaagc 14910528 Query: 626 ctattcca 633 |||||||| Sbjct: 14910527 ctattcca 14910520 Score = 131 bits (66), Expect = 4e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 634 cctgaatttttcatccttgaatagcagctcaatcagagcatctctgagatatggattggg 693 |||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||| Sbjct: 14910404 cctgaattttccatccttgaatagtagctcaattaaagcatctctgagatatggattggg 14910345 Query: 694 atctgtgagtaatcttttagcaaagtaaggatatgaggcagcaagcacct 743 ||| ||||||| ||||| ||||||||||| || |||||||| ||||||| Sbjct: 14910344 atcagtgagtagccttttcgcaaagtaagggtacgaggcagcgagcacct 14910295
>gb|BT012844.1| Lycopersicon esculentum clone 113914R, mRNA sequence Length = 2307 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 617 ttttcaagcctattccacctgaatttttcatccttgaatagcagctcaatcagagcatct 676 |||||||| ||| ||||||||||||| |||||||||| || | |||||| ||||||||| Sbjct: 1738 ttttcaagtctactccacctgaatttcccatccttgaaaagtaactcaatgagagcatct 1679 Query: 677 ctgagatatggattgggatctgtgagtaatcttttagcaaagtaaggatatgaggcagc 735 || ||||||||||| |||||||| || | ||||||||||| || |||||||| ||||| Sbjct: 1678 ctcagatatggattaggatctgtaagaagccttttagcaaaatatggatatgaagcagc 1620
>ref|NM_106608.2| Arabidopsis thaliana unknown protein AT1G79600 mRNA, complete cds Length = 2469 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Minus Query: 626 ctattccacctgaatttttcatccttgaatagcagctcaatcagagcatctctgagatat 685 ||||||||||| |||||| | || |||||||| ||||| || || |||||||| ||||| Sbjct: 1823 ctattccacctaaattttccgtctttgaatagtagctcgataagggcatctcttagatac 1764 Query: 686 ggattgggatctgtgagtaatcttttagcaaagtaaggatatgaggcagc 735 || || ||||| ||||| | ||||| ||||| || || ||||| ||||| Sbjct: 1763 gggtttggatcagtgagaagccttttggcaaaatatgggtatgaagcagc 1714
>gb|AY141992.1| Arabidopsis thaliana At1g79600/F20B17_3 mRNA, complete cds Length = 2136 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Minus Query: 626 ctattccacctgaatttttcatccttgaatagcagctcaatcagagcatctctgagatat 685 ||||||||||| |||||| | || |||||||| ||||| || || |||||||| ||||| Sbjct: 1649 ctattccacctaaattttccgtctttgaatagtagctcgataagggcatctcttagatac 1590 Query: 686 ggattgggatctgtgagtaatcttttagcaaagtaaggatatgaggcagc 735 || || ||||| ||||| | ||||| ||||| || || ||||| ||||| Sbjct: 1589 gggtttggatcagtgagaagccttttggcaaaatatgggtatgaagcagc 1540
>gb|AY064971.1| Arabidopsis thaliana At1g79600/F20B17_3 mRNA, complete cds Length = 2400 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Minus Query: 626 ctattccacctgaatttttcatccttgaatagcagctcaatcagagcatctctgagatat 685 ||||||||||| |||||| | || |||||||| ||||| || || |||||||| ||||| Sbjct: 1810 ctattccacctaaattttccgtctttgaatagtagctcgataagggcatctcttagatac 1751 Query: 686 ggattgggatctgtgagtaatcttttagcaaagtaaggatatgaggcagc 735 || || ||||| ||||| | ||||| ||||| || || ||||| ||||| Sbjct: 1750 gggtttggatcagtgagaagccttttggcaaaatatgggtatgaagcagc 1701
>gb|AY039869.1| Arabidopsis thaliana At1g79600/F20B17_3 mRNA, complete cds Length = 2445 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Minus Query: 626 ctattccacctgaatttttcatccttgaatagcagctcaatcagagcatctctgagatat 685 ||||||||||| |||||| | || |||||||| ||||| || || |||||||| ||||| Sbjct: 1800 ctattccacctaaattttccgtctttgaatagtagctcgataagggcatctcttagatac 1741 Query: 686 ggattgggatctgtgagtaatcttttagcaaagtaaggatatgaggcagc 735 || || ||||| ||||| | ||||| ||||| || || ||||| ||||| Sbjct: 1740 gggtttggatcagtgagaagccttttggcaaaatatgggtatgaagcagc 1691
>emb|BX815640.1|CNS0AE07 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS79ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2387 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Minus Query: 626 ctattccacctgaatttttcatccttgaatagcagctcaatcagagcatctctgagatat 685 ||||||||||| |||||| | || |||||||| ||||| || || |||||||| ||||| Sbjct: 1779 ctattccacctaaattttccgtctttgaatagtagctcgataagggcatctcttagatac 1720 Query: 686 ggattgggatctgtgagtaatcttttagcaaagtaaggatatgaggcagc 735 || || ||||| ||||| | ||||| ||||| || || ||||| ||||| Sbjct: 1719 gggtttggatcagtgagaagccttttggcaaaatatgggtatgaagcagc 1670
>gb|AC010793.3|AC010793 Genomic sequence for Arabidopsis thaliana BAC F20B17 from chromosome I, complete sequence Length = 90149 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Plus Query: 626 ctattccacctgaatttttcatccttgaatagcagctcaatcagagcatctctgagatat 685 ||||||||||| |||||| | || |||||||| ||||| || || |||||||| ||||| Sbjct: 13325 ctattccacctaaattttccgtctttgaatagtagctcgataagggcatctcttagatac 13384 Query: 686 ggattgggatctgtgagtaatcttttagcaaagtaaggatatgaggcagc 735 || || ||||| ||||| | ||||| ||||| || || ||||| ||||| Sbjct: 13385 gggtttggatcagtgagaagccttttggcaaaatatgggtatgaagcagc 13434
>emb|AL133314.1|ATF12A12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12A12 Length = 100815 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 708 ttttagcaaagtaaggatatgag 730 ||||||||||||||||||||||| Sbjct: 22500 ttttagcaaagtaaggatatgag 22478
>gb|AC133187.3| Mus musculus BAC clone RP23-324O10 from 1, complete sequence Length = 219866 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 ttatagttgcttttctttttcctttt 80 ||||| |||||||||||||||||||| Sbjct: 53925 ttataattgcttttctttttcctttt 53950
>gb|AC153022.1| Mus musculus 6 BAC RP23-115M13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201949 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 457 aatcagtgttccaaaggtgatg 478 |||||||||||||||||||||| Sbjct: 102478 aatcagtgttccaaaggtgatg 102499
>gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H120), complete sequence Length = 102431 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttgcttttctttttccttttg 81 ||||||||||||||||||||| Sbjct: 81533 ttgcttttctttttccttttg 81513
>gb|AC107868.9| Mus musculus chromosome 17, clone RP23-405A17, complete sequence Length = 193624 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tatagttgcttttctttttcc 76 ||||||||||||||||||||| Sbjct: 183124 tatagttgcttttctttttcc 183104
>gb|AC109204.21| Mus musculus chromosome 17, clone RP23-55J9, complete sequence Length = 245496 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tatagttgcttttctttttcc 76 ||||||||||||||||||||| Sbjct: 239582 tatagttgcttttctttttcc 239602
>gb|AC113038.14| Mus musculus chromosome 17, clone RP23-228K17, complete sequence Length = 226769 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tatagttgcttttctttttcc 76 ||||||||||||||||||||| Sbjct: 105607 tatagttgcttttctttttcc 105627
>emb|AL591069.5| Human DNA sequence from clone RP11-72O9 on chromosome 6q25.2-26 Contains the 3' end of the SSLC22A3 gene for solute carrier family 22 (extraneuronal monoamine transporter), member 3 (extraneuronal monoamine transporter solute carrier family 22 (organic cation transporter), member 3(EMT, EMTh, OCT3)), the APOARGC gene for apolipoprotein (a) related gene C and a plasminogen (PLG) pseudogene, complete sequence Length = 162083 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 tatagttgcttttctttttcctttt 80 |||| |||||||||||||||||||| Sbjct: 73634 tataattgcttttctttttcctttt 73658
>emb|AL157397.14| Human DNA sequence from clone RP11-438P12 on chromosome 10, complete sequence Length = 142281 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 634 cctgaatttttcatccttgaa 654 ||||||||||||||||||||| Sbjct: 40452 cctgaatttttcatccttgaa 40472
>gb|AC020701.8| Homo sapiens BAC clone RP11-200K10 from 4, complete sequence Length = 129572 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 atgaaaataaaacagacgctg 22 ||||||||||||||||||||| Sbjct: 27842 atgaaaataaaacagacgctg 27862
>gb|AC007916.10| Homo sapiens 12 BAC RP11-103D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121500 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 gcttctttcacaacaagcacc 517 ||||||||||||||||||||| Sbjct: 28669 gcttctttcacaacaagcacc 28649
>gb|AC009233.3|AC009233 Homo sapiens BAC clone RP11-356K22 from Y, complete sequence Length = 195439 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gcttttctttttccttttggt 83 ||||||||||||||||||||| Sbjct: 93492 gcttttctttttccttttggt 93512
>gb|AC005188.1|AC005188 Homo sapiens PAC clone RP1-17P5 from 5q31, complete sequence Length = 114918 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttgcttttctttttccttttg 81 ||||||||||||||||||||| Sbjct: 36819 ttgcttttctttttccttttg 36799
>gb|AC100406.7| Mus musculus chromosome 9, clone RP23-134M7, complete sequence Length = 183837 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 gatctcaaaagaccccatatt 331 ||||||||||||||||||||| Sbjct: 151059 gatctcaaaagaccccatatt 151039
>emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chromosome 2, complete sequence Length = 212364 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ttttctttttccttttggtgc 85 ||||||||||||||||||||| Sbjct: 83926 ttttctttttccttttggtgc 83946
>emb|AL663063.14| Mouse DNA sequence from clone RP23-407H16 on chromosome 2, complete sequence Length = 211815 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 665 atcagagcatctctgagatat 685 ||||||||||||||||||||| Sbjct: 68508 atcagagcatctctgagatat 68528 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,837,403 Number of Sequences: 3902068 Number of extensions: 7837403 Number of successful extensions: 177656 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 177492 Number of HSP's gapped (non-prelim): 152 length of query: 743 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 720 effective length of database: 17,143,297,704 effective search space: 12343174346880 effective search space used: 12343174346880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)