ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33j18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 51 3e-06
2CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) 40 0.007

>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = -1

Query: 717 SLHLVELKKTNGDTIEYKQLMKDEIRPALKDLVWAW 610
           S H+V LKK+ GDT EYK++MK+ IRPAL D V AW
Sbjct: 385 SYHMVVLKKSGGDTAEYKRVMKESIRPALIDFVLAW 420



to top

>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -1

Query: 717 SLHLVELKKTNGDTIEYKQLMKDEIRPALKDLVWAWQGD 601
           SLH+VELKK  GDT+E+++  +  +   LKD+VW   G+
Sbjct: 404 SLHVVELKKAKGDTLEFQKFYR-TLSTQLKDVVWKCDGE 441


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,513,646
Number of Sequences: 219361
Number of extensions: 1883587
Number of successful extensions: 4699
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4699
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top