ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags33j01 |
|---|---|
| Clone Library Name | barley_pub |
>ALG9_MOUSE (Q8VDI9) Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.-)| (Asparagine-linked glycosylation protein 9 homolog) (Disrupted in bipolar disorder protein 1 homolog) Length = 611 Score = 73.6 bits (179), Expect = 5e-13 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 3/125 (2%) Frame = -1 Query: 671 PSSFFVPSYISEVRWIDDGFRGLLPFPFNETLGGTTAAPSYFNTKNKASDKQYLKDIGAC 492 PSSF +P ++++I FRG LP PF E T P++ N +N+ +Y+ DI C Sbjct: 476 PSSFLLPDNW-QLQFIPSEFRGQLPKPFAEGPLATRTVPTHMNDQNREEPSRYI-DISKC 533 Query: 491 NLLMELDLRRPYPSRGNDLS---TWETLASLPFLDRELSPALYRSFFIPYQWEHKNVFGL 321 + L++LD R P N S W +LA PFLD S L R+F++P+ + V+ Sbjct: 534 HYLVDLDTMRETPREPNYSSHREEWVSLAHRPFLDASRSSKLLRAFYVPFLSDQYTVYVN 593 Query: 320 YKLLR 306 Y +L+ Sbjct: 594 YTILK 598
>ALG9_HUMAN (Q9H6U8) Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.-)| (Asparagine-linked glycosylation protein 9 homolog) (Disrupted in bipolar disorder protein 1) Length = 611 Score = 70.5 bits (171), Expect = 4e-12 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%) Frame = -1 Query: 671 PSSFFVPSYISEVRWIDDGFRGLLPFPFNETLGGTTAAPSYFNTKNKASDKQYLKDIGAC 492 PSSF +P ++++I FRG LP PF E T P+ N +N +Y+ DI C Sbjct: 476 PSSFLLPDNW-QLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYI-DISKC 533 Query: 491 NLLMELDLRRPYPSR---GNDLSTWETLASLPFLDRELSPALYRSFFIPYQWEHKNVFGL 321 + L++LD R P ++ W +LA PFLD S L R+F++P+ + V+ Sbjct: 534 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN 593 Query: 320 YKLLRRLPTDQGQLKANSSG 261 Y +L+ P Q++ S G Sbjct: 594 YTILK--PRKAKQIRKKSGG 611
>YTH3_CAEEL (P54002) Putative glycosyl transferase C14A4.3 in chromosome II (EC| 2.-.-.-) Length = 603 Score = 62.4 bits (150), Expect = 1e-09 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 15/138 (10%) Frame = -1 Query: 671 PSSFFVPSYIS-----EVRWIDDGFRGLLPFPF---NETLGGTTAAPSYFNTKNKASDKQ 516 PSSFF+P +S E+R+I FRGLLP PF ++ + T P+ N N+ + Sbjct: 466 PSSFFIPQTVSDGKKVEMRFIQSEFRGLLPKPFLKSDKLVEVTRHIPTEMNNLNQEEISR 525 Query: 515 YLKDIGACNLLMELDLRRPYPSRGNDL----STWETLASLPFLDRELSP---ALYRSFFI 357 Y+ D+ +C+ ++++D+ P R D W+ + SLPF+D S L R+F++ Sbjct: 526 YV-DLDSCDYVVDVDM--PQSDREPDFRKMEDNWKPVDSLPFIDVSKSTGFHGLLRAFYV 582 Query: 356 PYQWEHKNVFGLYKLLRR 303 P+ NV L R+ Sbjct: 583 PFLSAKHNVMTTCTLYRK 600
>YFV5_SCHPO (Q9P7Q9) Putative glycosyl transferase C1834.05 in chromosome I| precursor (EC 2.-.-.-) Length = 577 Score = 42.7 bits (99), Expect = 0.001 Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 13/138 (9%) Frame = -1 Query: 671 PSSFFVPSYISEVRWIDDGFRGLLPFPFNETLG------GTTAAPSYFNTKNKASDKQYL 510 PS+FF+P S ++++ F G+LP F E+ G P + N N +Y Sbjct: 432 PSTFFLPDN-SRLKFVKSEFDGILPGEFVESNSTWWNREGYYQIPEHMNEFNNEEPTRYT 490 Query: 509 KDIGACNLLMELD-------LRRPYPSRGNDLSTWETLASLPFLDRELSPALYRSFFIPY 351 + +C+ L++L+ + P S+ + W + PF+D + +P + R+F +P+ Sbjct: 491 S-LESCDFLIDLEFDHSKATVNEPIYSKSDG---WIPVMVYPFIDTKQTPFMGRAFAVPF 546 Query: 350 QWEHKNVFGLYKLLRRLP 297 + +G Y++L + P Sbjct: 547 ---IEPKWGRYEILVKKP 561
>ALG9_YEAST (P53868) Probable mannosyltransferase ALG9 (EC 2.4.1.-)| Length = 555 Score = 38.1 bits (87), Expect = 0.024 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 7/113 (6%) Frame = -1 Query: 671 PSSFFVPSYISEVRWIDDGFRGLLPFPFNET---LGGTTAAPSYFNTKNKASDKQYLKDI 501 PSSF +P ++++ GF GLLP F E+ P N KN D I Sbjct: 408 PSSFLLPDN-HRLKFVKSGFDGLLPGDFPESGSIFKKIRTLPKGMNNKN-IYDTGKEWPI 465 Query: 500 GACNLLMEL----DLRRPYPSRGNDLSTWETLASLPFLDRELSPALYRSFFIP 354 C+ +++ +L + + + + W LA F+D E S L R+F++P Sbjct: 466 TRCDYFIDIVAPINLTKDVFNPLHLMDNWNKLACAAFIDGENSKILGRAFYVP 518
>HPN_HELPY (P0A0V6) Histidine-rich metal-binding polypeptide| Length = 59 Score = 33.9 bits (76), Expect = 0.46 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -2 Query: 433 QHGRHWHRYHF*TESFHRHYTGRSSYHTNGSTRTFSGCIS 314 QHG H H +H + H HY G +H + S+ GC S Sbjct: 6 QHGGHHHHHH---HTHHHHYHGGEHHHHHHSSHHEEGCCS 42
>HPN_HELPJ (P0A0V7) Histidine-rich, metal binding polypeptide| Length = 59 Score = 33.9 bits (76), Expect = 0.46 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -2 Query: 433 QHGRHWHRYHF*TESFHRHYTGRSSYHTNGSTRTFSGCIS 314 QHG H H +H + H HY G +H + S+ GC S Sbjct: 6 QHGGHHHHHH---HTHHHHYHGGEHHHHHHSSHHEEGCCS 42
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 31.6 bits (70), Expect = 2.3 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Frame = +1 Query: 337 LCSHWYGMKNDRYSAGESSLSRNGSDANVSHVDRSFPREG*GRLRSSSISKLHAPMSFKY 516 LCS ++N S S S S N S ++ R RLR + ++ S + Sbjct: 2031 LCSKSLPVQNLSQSLSNSFNSSYMSSDNESDIEDEDLRLELRRLREKHLKEIQDLQSRQK 2090 Query: 517 CLSEALFLVL-K*DGAAVVPPSVSLKGNGRRPRK 615 E+L+ L K A ++PP+ L G RRP K Sbjct: 2091 HEIESLYTKLGKVPPAVIIPPAAPLSGRRRRPTK 2124
>UAP1_SCHPO (O94617) Probable UDP-N-acetylglucosamine pyrophosphorylase (EC| 2.7.7.23) Length = 475 Score = 31.2 bits (69), Expect = 3.0 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 11/79 (13%) Frame = +1 Query: 94 AWERTSLQSLHTDNIASISQTGGAVIRMKI*GTKFANRFD-PAKPKI----------QLT 240 +W RT L+ + ++A++ GG R+ G K R P P I L Sbjct: 84 SWWRTGLREIARGHVAALVLAGGQGTRLGFAGPKGCFRLGLPNNPSIFELQAQKIKKSLA 143 Query: 241 EATVACPPDELALSCPWSV 297 A A P E ++S PW + Sbjct: 144 LARAAFPDQEASISIPWYI 162
>SN1L2_CHICK (Q9IA88) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Qin-induced kinase) Length = 798 Score = 30.0 bits (66), Expect = 6.6 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 11/91 (12%) Frame = +1 Query: 214 PAKPKIQLTEATVACPPDELALSCPWSVGSLLSNLYSPKTF----------LCSHWYGMK 363 PA P+ T AT PP + A +C S LLS L +F L H++G+ Sbjct: 671 PACPQTSQTSATNGLPPSDSAGTCKASNSLLLSELQRENSFELAFGGNSQLLQPHFFGVS 730 Query: 364 NDRYSAGESSLSRN-GSDANVSHVDRSFPRE 453 S+ L + +NVS V +F ++ Sbjct: 731 VSPVSSAAHLLDTHLYISSNVSPVGTTFSQQ 761
>CATA_BRUSU (Q8FWU0) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 8.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 Query: 424 RHWHRYHF*TESFHRHYTGRSSYHTNGSTR 335 R+W ++HF T H+H+T + G TR Sbjct: 207 RYWVKFHFKTMQGHKHWTNAEAEQVIGRTR 236
>CATA_BRUME (P0A326) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 8.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 Query: 424 RHWHRYHF*TESFHRHYTGRSSYHTNGSTR 335 R+W ++HF T H+H+T + G TR Sbjct: 207 RYWVKFHFKTMQGHKHWTNAEAEQVIGRTR 236
>CATA_BRUAB (P0A327) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 8.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 Query: 424 RHWHRYHF*TESFHRHYTGRSSYHTNGSTR 335 R+W ++HF T H+H+T + G TR Sbjct: 207 RYWVKFHFKTMQGHKHWTNAEAEQVIGRTR 236
>DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC)| Length = 4725 Score = 29.6 bits (65), Expect = 8.7 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +1 Query: 1 ECSEYSIFRII--NSLTASVRRAGIRNSVGQLHAWERTSLQSLHTDNIASISQTGGAVIR 174 E S+YS ++ L R S QL+ W +L+ LH ++ IS GGA Sbjct: 4575 ESSDYSSIQVWLGGLLNPEAYITATRQSASQLNGWSLENLR-LHASSLGKISSEGGASFN 4633 Query: 175 MK 180 +K Sbjct: 4634 VK 4635
>HGD_HUMAN (Q93099) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 445 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +3 Query: 270 VSFELPLVGRQPPQQLIQPENVLVLPLVWYEERPV 374 V FELP +G L P + L+ P+ WYE+R V Sbjct: 206 VHFELPDLGPIGANGLANPRDFLI-PIAWYEDRQV 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,378,474 Number of Sequences: 219361 Number of extensions: 2057516 Number of successful extensions: 5103 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4905 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5096 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
