| Clone Name | rbags33h24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009629.1| Triticum aestivum clone wre1n.pk168.h11:fis, full insert mRNA sequence Length = 1391 Score = 1178 bits (594), Expect = 0.0 Identities = 665/687 (96%), Gaps = 5/687 (0%) Strand = Plus / Minus Query: 82 cacgtcagtcgaatttgcctaccattattgacagctttgtgggtttgcaaaaggaagaca 141 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1214 cacgtcagtcaaatttgcctaccattattgacagctttgtgggtttgcaaaaggaagaga 1155 Query: 142 ggggcaaggaaaacgaagactcaaaaaattcctccacttcggcacataatatgtgcgtgg 201 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 agggcaaggaaaacgaagactcaaaaaattcctccacttcggcacataatatgtgcgtgg 1095 Query: 202 atgtggccttataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgta 261 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 atgtggcctta--atatactgatgccaaaacaagcaatcatcttgcctttgcagactgta 1037 Query: 262 aacatggtacactgctggttgaatc---tagtaacggagcatgtaggtcctgcgtctgaa 318 |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 1036 aacatggtacaccgctggtcgaatcatctagtaacggagcatgtaggtcctgcgtctgaa 977 Query: 319 ccagttgtagtctggaagagtcttaattggtcccatggcagcgatggcaatatcctggtc 378 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 976 ccagttgtagtctggaagagacttaattggtcccatggcagcgatggcaatatcctggtc 917 Query: 379 aaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatctattctcgc 438 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 916 aaagatgaagcggtttgcaacacgcctgatagtgctcggatcaactgcatctattctcgc 857 Query: 439 aaaaagctcgggaataggaattctacggccatagatgagttgctgacgtccaatatcctc 498 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 aaaaagctcaggaataggaattctacggccatagatgagttgctggcgtccaatatcctc 797 Query: 499 aacaacagcagtggagccatcaaggtgtagttggatggacgatttcagctgattacgtgc 558 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 796 aacaacagcagtggagccatcaaggtggagttggatggaggatttcagctgattgcgtgc 737 Query: 559 acgaataacatcctcttcggtaaccctgtatgataatttgctcatctcttgcataattgc 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 acgaataacatcctcttcggtaaccctgtatgataatttgctcatctcttgcataattgc 677 Query: 619 aaaagccaaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagt 678 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 676 aaaagccaaatcatccaagcaatcagccttagcgacagcatagacaccaaacaggccagt 617 Query: 679 gtccttatagtttgtgttgaatgccattatactctcagctatgtcattgattgctactct 738 |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 616 gtccttgtagtttgtattgaatgccattatactctcagctatttcattgattgctactct 557 Query: 739 ctgtacaagctccgaacccatgtgctt 765 ||||||||||||||||||||||||||| Sbjct: 556 ctgtacaagctccgaacccatgtgctt 530 Score = 125 bits (63), Expect = 2e-25 Identities = 79/83 (95%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 1 attaaaattattggccgaaagacaacaatatccgaacacaaagatggaaaagtatcgtga 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 1318 attaaaattattggccgaaagacaacaatatccgaacac-aagatggaaaagtatcatga 1260 Query: 61 caattcatcatcatcataaaaca 83 | ||||||||||||| ||||||| Sbjct: 1259 cgattcatcatcatcgtaaaaca 1237
>dbj|AK060718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E10, full insert sequence Length = 1410 Score = 553 bits (279), Expect = e-154 Identities = 483/551 (87%) Strand = Plus / Minus Query: 212 ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 271 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| |||| Sbjct: 1083 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 1024 Query: 272 actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 331 | | | | || |||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1023 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 964 Query: 332 ggaagagtcttaattggtcccatggcagcgatggcaatatcctggtcaaagatgaagcgg 391 |||||| || ||| |||||||| ||||| || || |||||||||||||| ||||| ||| Sbjct: 963 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctggtcaaaaatgaaacgg 904 Query: 392 tttgcaacacgcctgatagtgctgggatcaactgcatctattctcgcaaaaagctcggga 451 || || || ||| ||| ||||| | ||||||||||||||||| ||||||||||| ||| Sbjct: 903 ttggccactcgcttgactgtgcttgcgtcaactgcatctattcttgcaaaaagctcagga 844 Query: 452 ataggaattctacggccatagatgagttgctgacgtccaatatcctcaacaacagcagtg 511 ||||||||||| || |||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 843 ataggaattcttcgaccatagatgagtaactgacggccaatatcctcaacaacagcagtg 784 Query: 512 gagccatcaaggtgtagttggatggacgatttcagctgattacgtgcacgaataacatcc 571 || ||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 783 gaaccatcgaggtgcagttggatggaagatttcagctgattacgtgcacggataacatct 724 Query: 572 tcttcggtaaccctgtatgataatttgctcatctcttgcataattgcaaaagccaaatca 631 || || ||||||| |||||| | |||||| ||||||||||| |||||||||||||||||| Sbjct: 723 tcctcagtaacccggtatgacagtttgctaatctcttgcatgattgcaaaagccaaatca 664 Query: 632 tccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttatagttt 691 |||||||| ||||||||||| ||||| || |||||||| |||||||||||||| || ||| Sbjct: 663 tccaagcagtcaggcttagcaacagcgtagacaccaaagaggccagtgtccttgtaattt 604 Query: 692 gtgttgaatgccattatactctcagctatgtcattgattgctactctctgtacaagctcc 751 || || |||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 603 gtattaaatgccattatactctcagcaatgtcattgatcgctaccctttgtacaagctct 544 Query: 752 gaacccatgtg 762 ||||||||||| Sbjct: 543 gaacccatgtg 533 Score = 67.9 bits (34), Expect = 5e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 82 cacgtcagtcgaatttgcctaccattattgacagctttgtgggttt 127 ||||||||| ||||||||||| |||||||||||||||||| ||||| Sbjct: 1206 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 1161
>dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025E12, full insert sequence Length = 2166 Score = 539 bits (272), Expect = e-150 Identities = 483/552 (87%), Gaps = 1/552 (0%) Strand = Plus / Minus Query: 212 ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 271 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| |||| Sbjct: 1841 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 1782 Query: 272 actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 331 | | | | || |||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1781 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 1722 Query: 332 ggaagagtcttaattggtcccatggcagcgatggcaatatcctggtcaaagatgaagcgg 391 |||||| || ||| |||||||| ||||| || || |||||||||||||| ||||| ||| Sbjct: 1721 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctggtcaaaaatgaaacgg 1662 Query: 392 tttgcaacacgcctgatagtgctgggatcaactgcatctattctcgcaaaaagctcggga 451 || || || ||| ||| ||||| | ||||||||||||||||| ||||||||||| ||| Sbjct: 1661 ttggccactcgcttgactgtgcttgcgtcaactgcatctattcttgcaaaaagctcagga 1602 Query: 452 ataggaattctacggccatagatgagttgctgacgtccaatatcctcaacaacagcag-t 510 ||||||||||| || |||||||||||| |||||| |||||||||||||||||||||| | Sbjct: 1601 ataggaattcttcgaccatagatgagtaactgacggccaatatcctcaacaacagcaggt 1542 Query: 511 ggagccatcaaggtgtagttggatggacgatttcagctgattacgtgcacgaataacatc 570 ||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1541 ggaaccatcgaggtgcagttggatggaagatttcagctgattacgtgcacggataacatc 1482 Query: 571 ctcttcggtaaccctgtatgataatttgctcatctcttgcataattgcaaaagccaaatc 630 || || ||||||| |||||| | |||||| ||||||||||| ||||||||||||||||| Sbjct: 1481 ttcctcagtaacccggtatgacagtttgctaatctcttgcatgattgcaaaagccaaatc 1422 Query: 631 atccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttatagtt 690 ||||||||| ||||||||||| ||||| || |||||||| |||||||||||||| || || Sbjct: 1421 atccaagcagtcaggcttagcaacagcgtagacaccaaagaggccagtgtccttgtaatt 1362 Query: 691 tgtgttgaatgccattatactctcagctatgtcattgattgctactctctgtacaagctc 750 ||| || |||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 1361 tgtattaaatgccattatactctcagcaatgtcattgatcgctaccctttgtacaagctc 1302 Query: 751 cgaacccatgtg 762 ||||||||||| Sbjct: 1301 tgaacccatgtg 1290 Score = 67.9 bits (34), Expect = 5e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 82 cacgtcagtcgaatttgcctaccattattgacagctttgtgggttt 127 ||||||||| ||||||||||| |||||||||||||||||| ||||| Sbjct: 1964 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 1919
>gb|AY108579.1| Zea mays PCO102927 mRNA sequence Length = 2137 Score = 490 bits (247), Expect = e-135 Identities = 424/483 (87%) Strand = Plus / Minus Query: 283 aatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtctggaagagtctt 342 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 1757 aatctagtaacggagcatgtaggtccggcgtctgaaccagttgtagtctggaagtccttg 1698 Query: 343 aattggtcccatggcagcgatggcaatatcctggtcaaagatgaagcggtttgcaacacg 402 || || ||||| ||||| || |||| |||||| |||||||||||||||||||||||||| Sbjct: 1697 gatcggccccatcgcagcaatagcaacatcctgatcaaagatgaagcggtttgcaacacg 1638 Query: 403 cctgatagtgctgggatcaactgcatctattctcgcaaaaagctcgggaataggaattct 462 | | | |||||| | |||||| ||||||||||| |||||||||||||| |||||||||| Sbjct: 1637 cttcacagtgcttgcatcaacagcatctattcttgcaaaaagctcgggggtaggaattct 1578 Query: 463 acggccatagatgagttgctgacgtccaatatcctcaacaacagcagtggagccatcaag 522 || |||||| | || ||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 1577 tcgtccataggtcagcagctgacggccaatgtcctcaacaacagcagttgaaccatcaag 1518 Query: 523 gtgtagttggatggacgatttcagctgattacgtgcacgaataacatcctcttcggtaac 582 ||| |||||||| || || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 1517 gtggagttggatagaggacttcagctgattacgtgcacggataacatcttcttccgtaac 1458 Query: 583 cctgtatgataatttgctcatctcttgcataattgcaaaagccaaatcatccaagcaatc 642 || |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1457 ccggtatgacaatttgctcatctcatgcataattgcaaaagccaaatcatccaagcaatc 1398 Query: 643 aggcttagcgacagcatacacaccaaacaggccagtgtccttatagtttgtgttgaatgc 702 || |||||| |||||||| |||||||| || ||||||||||| || || || |||||| | Sbjct: 1397 agccttagcaacagcatagacaccaaaaagaccagtgtccttgtaattcgtattgaatcc 1338 Query: 703 cattatactctcagctatgtcattgattgctactctctgtacaagctccgaacccatgtg 762 ||||| ||||||||| ||||||||||||||| | ||||| |||||||| ||||||||||| Sbjct: 1337 cattacactctcagcgatgtcattgattgctgccctctgcacaagctctgaacccatgtg 1278 Query: 763 ctt 765 ||| Sbjct: 1277 ctt 1275 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 82 cacgtcagtcgaatttgcctaccattattgacagctttgtgg 123 ||||||||||||| |||||| |||||||||||| ||||||| Sbjct: 1953 cacgtcagtcgaacctgcctatcattattgacagatttgtgg 1912
>gb|AY111909.1| Zea mays CL491_-2 mRNA sequence Length = 584 Score = 305 bits (154), Expect = 1e-79 Identities = 272/313 (86%) Strand = Plus / Minus Query: 453 taggaattctacggccatagatgagttgctgacgtccaatatcctcaacaacagcagtgg 512 |||||||||| || |||||| | || |||| || ||||| ||||| ||||||||||| | Sbjct: 557 taggaattcttcgtccataggtcagcagctggcggccaatgtcctcgacaacagcagttg 498 Query: 513 agccatcaaggtgtagttggatggacgatttcagctgattacgtgcacgaataacatcct 572 | ||||||||||| |||||||| || || |||||||||||||||||||| |||||||| | Sbjct: 497 aaccatcaaggtggagttggattgaggacttcagctgattacgtgcacggataacatctt 438 Query: 573 cttcggtaaccctgtatgataatttgctcatctcttgcataattgcaaaagccaaatcat 632 | || ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 437 cctccgtaacccggtatgacaatttgctcatctcatgcataattgcaaaagccaaatcat 378 Query: 633 ccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttatagtttg 692 |||||||||||| |||||| |||||||| ||||| | ||||||||||| || || Sbjct: 377 ccaagcaatcagccttagcaacagcatagacaccnnnnngaccagtgtccttgtaattca 318 Query: 693 tgttgaatgccattatactctcagctatgtcattgattgctactctctgtacaagctccg 752 ||||||||| ||||| ||||||||| ||||||||||||||| || ||||||||||||||| Sbjct: 317 tgttgaatgacattacactctcagcaatgtcattgattgctgctttctgtacaagctccg 258 Query: 753 aacccatgtgctt 765 ||||||||||||| Sbjct: 257 aacccatgtgctt 245
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 143 bits (72), Expect = 1e-30 Identities = 141/164 (85%) Strand = Plus / Minus Query: 212 ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 271 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| |||| Sbjct: 5842767 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 5842708 Query: 272 actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 331 | | | | || |||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 5842707 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 5842648 Query: 332 ggaagagtcttaattggtcccatggcagcgatggcaatatcctg 375 |||||| || ||| |||||||| ||||| || || |||||||| Sbjct: 5842647 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctg 5842604 Score = 121 bits (61), Expect = 4e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 547 ctgattacgtgcacgaataacatcctcttcggtaaccctgtatgataatttgctcatctc 606 ||||||||||||||| |||||||| || || ||||||| |||||| | |||||| ||||| Sbjct: 5841436 ctgattacgtgcacggataacatcttcctcagtaacccggtatgacagtttgctaatctc 5841377 Query: 607 ttgcataattgcaaaagccaaatcatccaagcaatcaggct 647 |||||| |||||||||||||||||||||||||| ||||||| Sbjct: 5841376 ttgcatgattgcaaaagccaaatcatccaagcagtcaggct 5841336 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 646 cttagcgacagcatacacaccaaacaggccagtgtccttatagtttgtgttgaatgccat 705 |||||| ||||| || |||||||| |||||||||||||| || ||||| || |||||||| Sbjct: 5840649 cttagcaacagcgtagacaccaaagaggccagtgtccttgtaatttgtattaaatgccat 5840590 Query: 706 tatactctcagctatgtcattgattgctactctctgtacaagctccgaac 755 |||||||||||| ||||||||||| ||||| || ||||||||||| |||| Sbjct: 5840589 tatactctcagcaatgtcattgatcgctaccctttgtacaagctctgaac 5840540 Score = 97.6 bits (49), Expect = 5e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 481 ctgacgtccaatatcctcaacaacagcagtggagccatcaaggtgtagttggatggacga 540 |||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| || Sbjct: 5841591 ctgacggccaatatcctcaacaacagcagtggaaccatcgaggtgcagttggatggaaga 5841532 Query: 541 tttcagctg 549 ||||||||| Sbjct: 5841531 tttcagctg 5841523 Score = 93.7 bits (47), Expect = 8e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 372 cctggtcaaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatcta 431 |||||||||| ||||| ||||| || || ||| ||| ||||| | ||||||||||||| Sbjct: 5841786 cctggtcaaaaatgaaacggttggccactcgcttgactgtgcttgcgtcaactgcatcta 5841727 Query: 432 ttctcgcaaaaagctcgggaataggaattctacggccatagatgagt 478 |||| ||||||||||| |||||||||||||| || |||||||||||| Sbjct: 5841726 ttcttgcaaaaagctcaggaataggaattcttcgaccatagatgagt 5841680 Score = 67.9 bits (34), Expect = 5e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 82 cacgtcagtcgaatttgcctaccattattgacagctttgtgggttt 127 ||||||||| ||||||||||| |||||||||||||||||| ||||| Sbjct: 5842890 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 5842845
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 143 bits (72), Expect = 1e-30 Identities = 141/164 (85%) Strand = Plus / Minus Query: 212 ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 271 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| |||| Sbjct: 71597 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 71538 Query: 272 actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 331 | | | | || |||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 71537 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 71478 Query: 332 ggaagagtcttaattggtcccatggcagcgatggcaatatcctg 375 |||||| || ||| |||||||| ||||| || || |||||||| Sbjct: 71477 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctg 71434 Score = 121 bits (61), Expect = 4e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 547 ctgattacgtgcacgaataacatcctcttcggtaaccctgtatgataatttgctcatctc 606 ||||||||||||||| |||||||| || || ||||||| |||||| | |||||| ||||| Sbjct: 70266 ctgattacgtgcacggataacatcttcctcagtaacccggtatgacagtttgctaatctc 70207 Query: 607 ttgcataattgcaaaagccaaatcatccaagcaatcaggct 647 |||||| |||||||||||||||||||||||||| ||||||| Sbjct: 70206 ttgcatgattgcaaaagccaaatcatccaagcagtcaggct 70166 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 646 cttagcgacagcatacacaccaaacaggccagtgtccttatagtttgtgttgaatgccat 705 |||||| ||||| || |||||||| |||||||||||||| || ||||| || |||||||| Sbjct: 69479 cttagcaacagcgtagacaccaaagaggccagtgtccttgtaatttgtattaaatgccat 69420 Query: 706 tatactctcagctatgtcattgattgctactctctgtacaagctccgaac 755 |||||||||||| ||||||||||| ||||| || ||||||||||| |||| Sbjct: 69419 tatactctcagcaatgtcattgatcgctaccctttgtacaagctctgaac 69370 Score = 97.6 bits (49), Expect = 5e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 481 ctgacgtccaatatcctcaacaacagcagtggagccatcaaggtgtagttggatggacga 540 |||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| || Sbjct: 70421 ctgacggccaatatcctcaacaacagcagtggaaccatcgaggtgcagttggatggaaga 70362 Query: 541 tttcagctg 549 ||||||||| Sbjct: 70361 tttcagctg 70353 Score = 93.7 bits (47), Expect = 8e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 372 cctggtcaaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatcta 431 |||||||||| ||||| ||||| || || ||| ||| ||||| | ||||||||||||| Sbjct: 70616 cctggtcaaaaatgaaacggttggccactcgcttgactgtgcttgcgtcaactgcatcta 70557 Query: 432 ttctcgcaaaaagctcgggaataggaattctacggccatagatgagt 478 |||| ||||||||||| |||||||||||||| || |||||||||||| Sbjct: 70556 ttcttgcaaaaagctcaggaataggaattcttcgaccatagatgagt 70510 Score = 67.9 bits (34), Expect = 5e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 82 cacgtcagtcgaatttgcctaccattattgacagctttgtgggttt 127 ||||||||| ||||||||||| |||||||||||||||||| ||||| Sbjct: 71720 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 71675
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 143 bits (72), Expect = 1e-30 Identities = 141/164 (85%) Strand = Plus / Minus Query: 212 ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 271 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| |||| Sbjct: 5841980 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 5841921 Query: 272 actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 331 | | | | || |||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 5841920 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 5841861 Query: 332 ggaagagtcttaattggtcccatggcagcgatggcaatatcctg 375 |||||| || ||| |||||||| ||||| || || |||||||| Sbjct: 5841860 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctg 5841817 Score = 121 bits (61), Expect = 4e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 547 ctgattacgtgcacgaataacatcctcttcggtaaccctgtatgataatttgctcatctc 606 ||||||||||||||| |||||||| || || ||||||| |||||| | |||||| ||||| Sbjct: 5840649 ctgattacgtgcacggataacatcttcctcagtaacccggtatgacagtttgctaatctc 5840590 Query: 607 ttgcataattgcaaaagccaaatcatccaagcaatcaggct 647 |||||| |||||||||||||||||||||||||| ||||||| Sbjct: 5840589 ttgcatgattgcaaaagccaaatcatccaagcagtcaggct 5840549 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 646 cttagcgacagcatacacaccaaacaggccagtgtccttatagtttgtgttgaatgccat 705 |||||| ||||| || |||||||| |||||||||||||| || ||||| || |||||||| Sbjct: 5839862 cttagcaacagcgtagacaccaaagaggccagtgtccttgtaatttgtattaaatgccat 5839803 Query: 706 tatactctcagctatgtcattgattgctactctctgtacaagctccgaac 755 |||||||||||| ||||||||||| ||||| || ||||||||||| |||| Sbjct: 5839802 tatactctcagcaatgtcattgatcgctaccctttgtacaagctctgaac 5839753 Score = 97.6 bits (49), Expect = 5e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 481 ctgacgtccaatatcctcaacaacagcagtggagccatcaaggtgtagttggatggacga 540 |||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| || Sbjct: 5840804 ctgacggccaatatcctcaacaacagcagtggaaccatcgaggtgcagttggatggaaga 5840745 Query: 541 tttcagctg 549 ||||||||| Sbjct: 5840744 tttcagctg 5840736 Score = 93.7 bits (47), Expect = 8e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 372 cctggtcaaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatcta 431 |||||||||| ||||| ||||| || || ||| ||| ||||| | ||||||||||||| Sbjct: 5840999 cctggtcaaaaatgaaacggttggccactcgcttgactgtgcttgcgtcaactgcatcta 5840940 Query: 432 ttctcgcaaaaagctcgggaataggaattctacggccatagatgagt 478 |||| ||||||||||| |||||||||||||| || |||||||||||| Sbjct: 5840939 ttcttgcaaaaagctcaggaataggaattcttcgaccatagatgagt 5840893 Score = 67.9 bits (34), Expect = 5e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 82 cacgtcagtcgaatttgcctaccattattgacagctttgtgggttt 127 ||||||||| ||||||||||| |||||||||||||||||| ||||| Sbjct: 5842103 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 5842058
>gb|AF363285.1|AF363285 Avicennia marina mitochondrial processing peptidase mRNA, complete cds; nuclear gene for mitochondrial product Length = 1870 Score = 111 bits (56), Expect = 3e-21 Identities = 131/156 (83%) Strand = Plus / Minus Query: 610 cataattgcaaaagccaaatcatccaagcaatcaggcttagcgacagcatacacaccaaa 669 |||||| ||| | |||||||| |||||||| ||||||||||| | |||||| |||||||| Sbjct: 1319 cataatcgcataggccaaatcgtccaagcagtcaggcttagcaatagcataaacaccaaa 1260 Query: 670 caggccagtgtccttatagtttgtgttgaatgccattatactctcagctatgtcattgat 729 | |||||||| |||||||| || ||||| ||||| || ||||| ||||| |||||||| Sbjct: 1259 taaaccagtgtctttatagttggtattgaaagccatcatgctctcggctatttcattgat 1200 Query: 730 tgctactctctgtacaagctccgaacccatgtgctt 765 | ||||||||| ||||||| |||||||| ||||| Sbjct: 1199 cccaactctctgtgcaagctcagaacccatatgctt 1164 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 377 tcaaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatctattctc 436 ||||| ||||| ||||||||||||||| |||| ||||||||||| || || ||||| || Sbjct: 1552 tcaaatatgaatcggtttgcaacacgcttgatggtgctgggatctacggcgtctatcctg 1493 Query: 437 gcaaa 441 ||||| Sbjct: 1492 gcaaa 1488 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 286 ctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtctgg 333 ||||||||||||| |||||| ||||| |||||||||||||| ||||| Sbjct: 1643 ctagtaacggagccagtaggttctgcgcctgaaccagttgtaatctgg 1596
>gb|AF297643.1|AF297643 Cucumis melo mitochondrial processing peptidase beta subunit mRNA, complete cds; nuclear gene for mitochondrial product Length = 1906 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 614 attgcaaaagccaaatcatccaagcaatcaggcttagcgacagcatacacaccaaacagg 673 |||||| ||||||||||||||||||| |||||||| || |||||||| |||||||| || Sbjct: 1298 attgcataagccaaatcatccaagcagtcaggctttgcaacagcatagacaccaaaaaga 1239 Query: 674 ccagtgtccttatagtttgtgttgaatgccattatactctcagctatgtcattgattgct 733 ||||||||||| || || |||||||| ||||| ||||| || |||| |||||||| || Sbjct: 1238 ccagtgtccttgtaattggtgttgaaagccatcatactttctgctacctcattgatggca 1179 Query: 734 actctctgtacaagctccgaacccatgtgctt 765 ||||| || | ||||| |||||||| ||||| Sbjct: 1178 actctttgggccagctcagaacccatatgctt 1147 Score = 42.1 bits (21), Expect = 2.7 Identities = 63/77 (81%) Strand = Plus / Minus Query: 392 tttgcaacacgcctgatagtgctgggatcaactgcatctattctcgcaaaaagctcggga 451 ||||||||||| | |||||||| | |||||| ||||| ||||| ||||| | |||| | Sbjct: 1520 tttgcaacacgttttatagtgcttgcatcaacagcatcaattcttgcaaacaattcggca 1461 Query: 452 ataggaattctacggcc 468 | |||||||||||||| Sbjct: 1460 aacggaattctacggcc 1444
>emb|X80237.1|STBIMPP S.tuberosum mRNA for beta-I MPP Length = 1961 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 634 caagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttatagtttgt 693 |||||||||||||||||| ||||||| ||||||||||| || || || |||||||| || Sbjct: 1275 caagcaatcaggcttagcttcagcatagacaccaaacagccctgtatctttatagttggt 1216 Query: 694 gttgaatgccattatactctcagctatgtcattgattgctactctctgtacaagctccga 753 ||| || ||||| | ||| ||||||| ||||| || || || ||||| |||||||| || Sbjct: 1215 gttaaaagccatcacactttcagctagctcattaatggccaccctctggacaagctctga 1156 Query: 754 acccatgtgctt 765 |||||||||||| Sbjct: 1155 acccatgtgctt 1144 Score = 42.1 bits (21), Expect = 2.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 283 aatctagtaacggagcatgtaggtcctgcgtctgaaccagttgta 327 ||||||||| || ||| ||| |||||||||| |||||||||||| Sbjct: 1626 aatctagtagcgcagccagtatgtcctgcgtcggaaccagttgta 1582 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 539 gatttcagctgattacgtgcacgaa 563 |||||||||||||||||||| |||| Sbjct: 1370 gatttcagctgattacgtgcgcgaa 1346
>ref|NM_111075.2| Arabidopsis thaliana MPPBETA; metalloendopeptidase AT3G02090 (MPPBETA) transcript variant AT3G02090.1 mRNA, complete cds Length = 2056 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 626 aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 685 ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| Sbjct: 1331 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1272 Query: 686 tagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1271 tagttagtgttgaatgccattatgctttctgctatttcatt 1231
>ref|NM_180169.1| Arabidopsis thaliana MPPBETA; metalloendopeptidase AT3G02090 (MPPBETA) transcript variant AT3G02090.2 mRNA, complete cds Length = 2060 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 626 aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 685 ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| Sbjct: 1331 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1272 Query: 686 tagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1271 tagttagtgttgaatgccattatgctttctgctatttcatt 1231
>gb|BT000830.1| Arabidopsis thaliana putative mitochondrial processing peptidase (At3g02090/F1C9_12) mRNA, complete cds Length = 1596 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 626 aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 685 ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| Sbjct: 1256 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1197 Query: 686 tagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1196 tagttagtgttgaatgccattatgctttctgctatttcatt 1156
>gb|BT000662.1| Arabidopsis thaliana clone RAFL07-09-O22 (R10705) putative mitochondrial processing peptidase (At3g02090) mRNA, complete cds Length = 2036 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 626 aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 685 ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| Sbjct: 1319 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1260 Query: 686 tagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1259 tagttagtgttgaatgccattatgctttctgctatttcatt 1219
>gb|AY057579.1| Arabidopsis thaliana At3g02090 mRNA sequence Length = 2026 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 626 aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 685 ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| Sbjct: 1327 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1268 Query: 686 tagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1267 tagttagtgttgaatgccattatgctttctgctatttcatt 1227
>gb|AY126990.1| Arabidopsis thaliana AT3g02090/F1C9_12 mRNA, complete cds Length = 1911 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 626 aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 685 ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| Sbjct: 1326 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1267 Query: 686 tagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1266 tagttagtgttgaatgccattatgctttctgctatttcatt 1226
>emb|BX823363.1|CNS0A4RL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS27ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1928 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 626 aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 685 ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| Sbjct: 1322 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1263 Query: 686 tagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1262 tagttagtgttgaatgccattatgctttctgctatttcatt 1222
>gb|BT001915.1| Arabidopsis thaliana clone C105149 putative mitochondrial processing peptidase (At3g02090) mRNA, complete cds Length = 1627 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 626 aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 685 ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| Sbjct: 1256 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1197 Query: 686 tagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1196 tagttagtgttgaatgccattatgctttctgctatttcatt 1156
>emb|BX825296.1|CNS0A4ZN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1939 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 628 atcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttata 687 ||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| || Sbjct: 1304 atcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttgta 1245 Query: 688 gtttgtgttgaatgccattatactctcagctatgtcatt 726 ||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1244 gttagtgttgaatgccattatgctttctgctatttcatt 1206
>gb|BT013728.1| Lycopersicon esculentum clone 132587R, mRNA sequence Length = 1778 Score = 63.9 bits (32), Expect = 7e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 285 tctagtaacggagcatgtaggtcctgcgtctgaaccagtt 324 |||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1667 tctaataacggagcatgtaggttctgcgtctgaaccagtt 1628 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 625 caaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctt 684 ||||||| ||| ||||||||||| || ||||||||||| || |||| ||||| ||||| Sbjct: 1327 caaatcactcaaacaatcaggctttgcaacagcatacacgccgaacaaaccagtatcctt 1268 Query: 685 atagtttgtgttgaatgccattatactctcagc 717 |||||| ||||| || | ||| || |||||||| Sbjct: 1267 atagttggtgttaaaagacatcatgctctcagc 1235
>gb|DQ284488.1| Solanum tuberosum clone 028E08 mitochondrial processing peptidase-like mRNA, complete cds; nuclear gene for mitochondrial product Length = 1761 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 625 caaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctt 684 ||||||| ||| ||||||||||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 1312 caaatcactcaaacaatcaggctttgcaacagcatacacgccgaacagaccagtatcctt 1253 Query: 685 atagtttgtgttgaatgccattatactctcagcta 719 ||| || ||||| || | ||| || |||||||||| Sbjct: 1252 ataattggtgttaaaagacatcatgctctcagcta 1218
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 668 aacaggccagtgtccttatagtttgtgttgaatgccattatactctcagctatgtcatt 726 ||||| ||||| ||||| ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 41747 aacagtccagtatccttgtagttagtgttgaatgccattatgctttctgctatttcatt 41805
>emb|X80235.1|STBIIMPP S.tuberosum mRNA for beta-II MPP Length = 1848 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 625 caaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctt 684 ||||||| ||| ||||||| ||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 1311 caaatcactcaaacaatcagactttgcaacagcatacacgccgaacagaccagtatcctt 1252 Query: 685 atagtttgtgttgaatgccattatactctcagcta 719 ||| || ||||| || | ||| || |||||||||| Sbjct: 1251 ataattggtgttaaaagacatcatgctctcagcta 1217
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 aagacaggggcaaggaaaacga 157 |||||||||||||||||||||| Sbjct: 1831617 aagacaggggcaaggaaaacga 1831596
>emb|AJ538971.1|NTA538971 Nicotiana tabacum cDNA-AFLP-fragment BT31-M2-028 Length = 274 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Plus Query: 545 agctgattacgtgcacgaataacatc 570 |||||||||||||||||||| ||||| Sbjct: 65 agctgattacgtgcacgaatgacatc 90
>ref|NM_118394.2| Arabidopsis thaliana MYB85; DNA binding / transcription factor AT4G22680 (MYB85) mRNA, complete cds Length = 1386 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 734 acaattcatcatcatcataaa 714
>gb|AY519608.1| Arabidopsis thaliana MYB transcription factor (At4g22680) mRNA, complete cds Length = 801 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 598 acaattcatcatcatcataaa 578
>gb|DQ446863.1| Arabidopsis thaliana clone pENTR221-At4g22680 myb family transcription factor (At4g22680) mRNA, complete cds Length = 801 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 598 acaattcatcatcatcataaa 578
>emb|CR450809.6| Zebrafish DNA sequence from clone CH211-195I6 in linkage group 2, complete sequence Length = 206746 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gccatagatgagttgctgacg 486 ||||||||||||||||||||| Sbjct: 169259 gccatagatgagttgctgacg 169279
>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57 Length = 199577 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 159699 acaattcatcatcatcataaa 159719
>emb|AL021635.1|ATT12H17 Arabidopsis thaliana DNA chromosome 4, BAC clone T12H17 (ESSAII project) Length = 89350 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 16030 acaattcatcatcatcataaa 16050
>ref|XM_678031.1| PREDICTED: Danio rerio similar to retinal-specific ATP transporter ABCA4 (LOC555506), mRNA Length = 4932 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gccatagatgagttgctgacg 486 ||||||||||||||||||||| Sbjct: 4825 gccatagatgagttgctgacg 4845
>gb|AF175993.2|AF175993 Arabidopsis thaliana putative transcription factor (MYB85) mRNA, complete cds Length = 813 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 610 acaattcatcatcatcataaa 590
>gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, complete sequence Length = 210038 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 atactgatgccaaaacaagca 237 ||||||||||||||||||||| Sbjct: 156558 atactgatgccaaaacaagca 156538
>emb|BX829062.1|CNS0A3K8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 912 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 561 acaattcatcatcatcataaa 541
>gb|AY085497.1| Arabidopsis thaliana clone 154343 mRNA, complete sequence Length = 1154 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 734 acaattcatcatcatcataaa 714
>dbj|AK175777.1| Arabidopsis thaliana mRNA for myb-like protein, complete cds, clone: RAFL22-35-I17 Length = 1201 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 731 acaattcatcatcatcataaa 711
>dbj|AK175718.1| Arabidopsis thaliana mRNA for myb-like protein, complete cds, clone: RAFL22-25-P15 Length = 1201 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acaattcatcatcatcataaa 80 ||||||||||||||||||||| Sbjct: 731 acaattcatcatcatcataaa 711 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,710,075 Number of Sequences: 3902068 Number of extensions: 7710075 Number of successful extensions: 132903 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132710 Number of HSP's gapped (non-prelim): 189 length of query: 765 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 742 effective length of database: 17,143,297,704 effective search space: 12720326896368 effective search space used: 12720326896368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)