>YFF4_YEAST (P43549) Hypothetical 70.5 kDa protein in AGP3-DAK3 intergenic|
           region
          Length = 646

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = -2

Query: 531 PQPPENTADGSVPRQVPRMTVDVNFSEFAGESDAGSNQGTPGRPLHHVHSISPSTASFAR 352
           PQ P NT   +V R+  R + +VNFS    ES A S      R L ++ ++  ST  + +
Sbjct: 244 PQKPSNTHIENVSRKKKRTSHNVNFS-LGDESYASSIADAESRKLKNMQTLDGSTPVYTK 302

Query: 351 SP 346
            P
Sbjct: 303 LP 304

>FBX42_MOUSE (Q6PDJ6) F-box only protein 42|
          Length = 717

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 12/109 (11%)
 Frame = -2

Query: 513 TADGSVPRQVPRMTVDVNFSEFAGESDAGS-NQGTPGRPLHHVHSIS---PSTASFARSP 346
           T  GSV R  P  T  V+       + AG+ + G   R L  + ++S   PS ++    P
Sbjct: 522 TVAGSV-RHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPP 580

Query: 345 FGSRNHNPGNXXXXXXXXXXXXXXXXXAGTGHQ--------GHHPSASL 223
            GS   +PG+                  G GH         GHHP  SL
Sbjct: 581 LGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSL 629

>MUTA_STRCM (Q05064) Methylmalonyl-CoA mutase small subunit (EC 5.4.99.2)|
           (MCM-beta)
          Length = 616

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 510 ADGSVPRQVPRMTVDVNFSEFAGESDAGSNQGTPGRPLHHVHSISPSTASFARSPFGS 337
           A  + P  +PR+  D  + E  G SDA   + T  RP   + ++ P+ A  AR+ F +
Sbjct: 463 APAAPPGGLPRVRRDEAYEELRGRSDA-HLEATGARPKVFIAALGPAAAHTARATFAA 519


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,240,979
Number of Sequences: 219361
Number of extensions: 1626630
Number of successful extensions: 4233
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4232
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)