>ref|XM_476192.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1056

 Score =  222 bits (112), Expect = 1e-54
 Identities = 213/246 (86%), Gaps = 3/246 (1%)
 Strand = Plus / Minus

                                                                       
Query: 242 tgtccttgatgcccggtacctgcgaagcgagacgggcttgctgtagagaaaggtgctgct 301
           ||||||||||  || ||| |||| ||||| ||||| |||||||| |||||||  ||||  
Sbjct: 932 tgtccttgatttccagtagctgcaaagcgggacggacttgctgtcgagaaagtcgctg-- 875

                                                                       
Query: 302 ggacttcttggagtgttgccagggttgtggttgcgagaaccaaatggagacctagcaaag 361
            |||||||||||||||  ||||  ||||| | | ||||||| || |||||||||||||| 
Sbjct: 874 -gacttcttggagtgtgaccagaattgtgttggagagaaccgaacggagacctagcaaaa 816

                                                                       
Query: 362 gaggctgttgaaggagaaatactgtggacatgatgcaagggacgtccaggagtgccctgg 421
           ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 815 gaggctgttgaaggagaaatactatgaacatgatgcaagggacgtccaggagtgccctgg 756

                                                                       
Query: 422 ttggaaccagcatctgactccccagcaaactcgctgaaattgacatcaacggtcattctg 481
           |||||||| || || ||||| |||||||  || || ||||||||||||||||||||||||
Sbjct: 755 ttggaacccgcctcagactcgccagcaacatcactaaaattgacatcaacggtcattctg 696

                 
Query: 482 ggcacc 487
           ||||||
Sbjct: 695 ggcacc 690



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttatgttgaactgggcgggcgatagtccctgaatacggaggaagagccaccggatgcagc 186
            |||||||||| |||| |||||||| |||||||| ||||||||||| || ||||| |||||
Sbjct: 1056 ttatgttgaattgggtgggcgataatccctgaacacggaggaagaaccgccggaggcagc 997

                                       
Query: 187  aggggaaggcgacgatgctacaaagtt 213
             ||||||||||| || |||||||||||
Sbjct: 996  gggggaaggcgaagaggctacaaagtt 970

>dbj|AK109456.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-D12, full
            insert sequence
          Length = 1535

 Score =  222 bits (112), Expect = 1e-54
 Identities = 213/246 (86%), Gaps = 3/246 (1%)
 Strand = Plus / Minus

                                                                        
Query: 242  tgtccttgatgcccggtacctgcgaagcgagacgggcttgctgtagagaaaggtgctgct 301
            ||||||||||  || ||| |||| ||||| ||||| |||||||| |||||||  ||||  
Sbjct: 1198 tgtccttgatttccagtagctgcaaagcgggacggacttgctgtcgagaaagtcgctg-- 1141

                                                                        
Query: 302  ggacttcttggagtgttgccagggttgtggttgcgagaaccaaatggagacctagcaaag 361
             |||||||||||||||  ||||  ||||| | | ||||||| || |||||||||||||| 
Sbjct: 1140 -gacttcttggagtgtgaccagaattgtgttggagagaaccgaacggagacctagcaaaa 1082

                                                                        
Query: 362  gaggctgttgaaggagaaatactgtggacatgatgcaagggacgtccaggagtgccctgg 421
            ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1081 gaggctgttgaaggagaaatactatgaacatgatgcaagggacgtccaggagtgccctgg 1022

                                                                        
Query: 422  ttggaaccagcatctgactccccagcaaactcgctgaaattgacatcaacggtcattctg 481
            |||||||| || || ||||| |||||||  || || ||||||||||||||||||||||||
Sbjct: 1021 ttggaacccgcctcagactcgccagcaacatcactaaaattgacatcaacggtcattctg 962

                  
Query: 482  ggcacc 487
            ||||||
Sbjct: 961  ggcacc 956



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttatgttgaactgggcgggcgatagtccctgaatacggaggaagagccaccggatgcagc 186
            |||||||||| |||| |||||||| |||||||| ||||||||||| || ||||| |||||
Sbjct: 1322 ttatgttgaattgggtgggcgataatccctgaacacggaggaagaaccgccggaggcagc 1263

                                       
Query: 187  aggggaaggcgacgatgctacaaagtt 213
             ||||||||||| || |||||||||||
Sbjct: 1262 gggggaaggcgaagaggctacaaagtt 1236

>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0043H23, complete sequence
          Length = 134097

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                         
Query: 336   gagaaccaaatggagacctagcaaaggaggctgttgaaggagaaatactgtggacatgat 395
             ||||||| || |||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 39965 gagaaccgaacggagacctagcaaaagaggctgttgaaggagaaatactatgaacatgat 39906

                                                                         
Query: 396   gcaagggacgtccaggagtgccctggttggaaccagcatctgactccccagcaaactcgc 455
             |||||||||||||||||||||||||||||||||| || || ||||| |||||||  || |
Sbjct: 39905 gcaagggacgtccaggagtgccctggttggaacccgcctcagactcgccagcaacatcac 39846

                                             
Query: 456   tgaaattgacatcaacggtcattctgggcacc 487
             | ||||||||||||||||||||||||||||||
Sbjct: 39845 taaaattgacatcaacggtcattctgggcacc 39814



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 127   ttatgttgaactgggcgggcgatagtccctgaatacggaggaagagccaccggatgcagc 186
             |||||||||| |||| |||||||| |||||||| ||||||||||| || ||||| |||||
Sbjct: 40451 ttatgttgaattgggtgggcgataatccctgaacacggaggaagaaccgccggaggcagc 40392

                                        
Query: 187   aggggaaggcgacgatgctacaaagtt 213
              ||||||||||| || |||||||||||
Sbjct: 40391 gggggaaggcgaagaggctacaaagtt 40365

>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08,
             complete sequence
          Length = 152527

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                         
Query: 336   gagaaccaaatggagacctagcaaaggaggctgttgaaggagaaatactgtggacatgat 395
             ||||||| || |||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 75443 gagaaccgaacggagacctagcaaaagaggctgttgaaggagaaatactatgaacatgat 75384

                                                                         
Query: 396   gcaagggacgtccaggagtgccctggttggaaccagcatctgactccccagcaaactcgc 455
             |||||||||||||||||||||||||||||||||| || || ||||| |||||||  || |
Sbjct: 75383 gcaagggacgtccaggagtgccctggttggaacccgcctcagactcgccagcaacatcac 75324

                                             
Query: 456   tgaaattgacatcaacggtcattctgggcacc 487
             | ||||||||||||||||||||||||||||||
Sbjct: 75323 taaaattgacatcaacggtcattctgggcacc 75292



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 127   ttatgttgaactgggcgggcgatagtccctgaatacggaggaagagccaccggatgcagc 186
             |||||||||| |||| |||||||| |||||||| ||||||||||| || ||||| |||||
Sbjct: 75929 ttatgttgaattgggtgggcgataatccctgaacacggaggaagaaccgccggaggcagc 75870

                                        
Query: 187   aggggaaggcgacgatgctacaaagtt 213
              ||||||||||| || |||||||||||
Sbjct: 75869 gggggaaggcgaagaggctacaaagtt 75843

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                           
Query: 336     gagaaccaaatggagacctagcaaaggaggctgttgaaggagaaatactgtggacatgat 395
               ||||||| || |||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 7337188 gagaaccgaacggagacctagcaaaagaggctgttgaaggagaaatactatgaacatgat 7337129

                                                                           
Query: 396     gcaagggacgtccaggagtgccctggttggaaccagcatctgactccccagcaaactcgc 455
               |||||||||||||||||||||||||||||||||| || || ||||| |||||||  || |
Sbjct: 7337128 gcaagggacgtccaggagtgccctggttggaacccgcctcagactcgccagcaacatcac 7337069

                                               
Query: 456     tgaaattgacatcaacggtcattctgggcacc 487
               | ||||||||||||||||||||||||||||||
Sbjct: 7337068 taaaattgacatcaacggtcattctgggcacc 7337037



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                           
Query: 127     ttatgttgaactgggcgggcgatagtccctgaatacggaggaagagccaccggatgcagc 186
               |||||||||| |||| |||||||| |||||||| ||||||||||| || ||||| |||||
Sbjct: 7337674 ttatgttgaattgggtgggcgataatccctgaacacggaggaagaaccgccggaggcagc 7337615

                                          
Query: 187     aggggaaggcgacgatgctacaaagtt 213
                ||||||||||| || |||||||||||
Sbjct: 7337614 gggggaaggcgaagaggctacaaagtt 7337588

>emb|AL049552.20|HSJ388E23 Human DNA sequence from clone RP3-388E23 on chromosome 6q22.33-24.1
             Contains part of the gene for a novel protein, a novel
             gene and a CpG Island, complete sequence
          Length = 98828

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 33    tcaataaagtagcaattcaaag 54
             ||||||||||||||||||||||
Sbjct: 52375 tcaataaagtagcaattcaaag 52354

>emb|BX927104.11| Zebrafish DNA sequence from clone CH211-210P22 in linkage group 17,
              complete sequence
          Length = 146265

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 19     ttcacataatattgtcaataaa 40
              ||||||||||||||||||||||
Sbjct: 105285 ttcacataatattgtcaataaa 105306

>emb|BX548041.14| Zebrafish DNA sequence from clone CH211-223G17 in linkage group 12,
             complete sequence
          Length = 123626

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 19    ttcacataatattgtcaataaa 40
             ||||||||||||||||||||||
Sbjct: 87861 ttcacataatattgtcaataaa 87882

>emb|AL627250.8| Human DNA sequence from clone RP13-222H17 on chromosome X Contains a
             novel pseudogene, complete sequence
          Length = 177796

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 366   ctgttgaaggagaaatactgt 386
             |||||||||||||||||||||
Sbjct: 10524 ctgttgaaggagaaatactgt 10504

>gb|AC084377.5| Homo sapiens BAC clone RP11-478L9 from 2, complete sequence
          Length = 152320

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 370   tgaaggagaaatactgtggac 390
             |||||||||||||||||||||
Sbjct: 95047 tgaaggagaaatactgtggac 95067

>gb|AC019060.5|AC019060 Homo sapiens BAC clone RP11-125K5 from Y, complete sequence
          Length = 116795

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 366  ctgttgaaggagaaatactgt 386
            |||||||||||||||||||||
Sbjct: 9312 ctgttgaaggagaaatactgt 9292

>gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome 7, complete sequence
          Length = 227709

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   aaaggaggctgttgaaggag 377
             ||||||||||||||||||||
Sbjct: 22831 aaaggaggctgttgaaggag 22812

>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 354     tagcaaaggaggctgttgaa 373
               ||||||||||||||||||||
Sbjct: 1236726 tagcaaaggaggctgttgaa 1236745

>gb|AC095021.2| Sus scrofa clone RP44-290D23, complete sequence
          Length = 165901

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 479   ctgggcacctgtctgggaacactt 502
             ||||||||||| ||||||||||||
Sbjct: 15403 ctgggcacctgcctgggaacactt 15426

>ref|XM_662875.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.50109)
           partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  cacataatattgtcaataaa 40
           ||||||||||||||||||||
Sbjct: 602 cacataatattgtcaataaa 621

>emb|AL732594.5| Mouse DNA sequence from clone RP24-189G18 on chromosome 4 Contains the
              Prpf4 gene for PRP4 pre-mRNA processing factor 4 homolog
              (yeast), three novel genes, the Bspry gene for B-box and
              SPRY domain containing protein, the Alad gene for delta
              aminolevulinate dehydratase, the Pole3 gene for polymerase
              (DNA directed) epsilon 3 (p17 subunit) and three CpG
              islands, complete sequence
          Length = 145776

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    gatgcagcaggggaaggcga 198
              ||||||||||||||||||||
Sbjct: 136117 gatgcagcaggggaaggcga 136136

>emb|BX548248.9| Zebrafish DNA sequence from clone DKEY-245P14 in linkage group 1,
             complete sequence
          Length = 173643

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ataatattgtcaataaagta 43
             ||||||||||||||||||||
Sbjct: 90556 ataatattgtcaataaagta 90537

>ref|XM_626205.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_2680),
            partial mRNA
          Length = 3780

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   cacataatattgtcaataaa 40
            ||||||||||||||||||||
Sbjct: 2582 cacataatattgtcaataaa 2601

>gb|AC060788.11| Homo sapiens chromosome 8, clone CTD-2008O4, complete sequence
          Length = 177717

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     aaagtagcaattcaaagagg 57
              ||||||||||||||||||||
Sbjct: 154386 aaagtagcaattcaaagagg 154405

>dbj|AK077205.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4933430I17 product:weakly similar to
            HYPOTHETICAL 53.2 KDA PROTEIN [Macaca fascicularis], full
            insert sequence
          Length = 1785

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  gatgcagcaggggaaggcga 198
            ||||||||||||||||||||
Sbjct: 1055 gatgcagcaggggaaggcga 1074

>gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, complete sequence
          Length = 215022

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    aaaggaggctgttgaaggag 377
              ||||||||||||||||||||
Sbjct: 179733 aaaggaggctgttgaaggag 179714

>gb|AC124730.5| Mus musculus chromosome 5 clone RP23-286M3, complete sequence
          Length = 194040

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    tcagctgtgttttctggcgg 525
              ||||||||||||||||||||
Sbjct: 174551 tcagctgtgttttctggcgg 174532

>ref|NM_177607.2| Mus musculus RIKEN cDNA 4933430I17 gene (4933430I17Rik), mRNA
          Length = 1785

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  gatgcagcaggggaaggcga 198
            ||||||||||||||||||||
Sbjct: 1055 gatgcagcaggggaaggcga 1074

>gb|AF051241.1|AF051241 Picea mariana phosphoglycerate kinase (Sb56) mRNA, partial cds
          Length = 663

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  ttgtcaataaagtagcaatt 49
           ||||||||||||||||||||
Sbjct: 634 ttgtcaataaagtagcaatt 653

>gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, complete sequence
          Length = 194931

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    tcagctgtgttttctggcgg 525
              ||||||||||||||||||||
Sbjct: 172569 tcagctgtgttttctggcgg 172588

>gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 map 5, complete sequence
          Length = 203821

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    tcagctgtgttttctggcgg 525
              ||||||||||||||||||||
Sbjct: 199879 tcagctgtgttttctggcgg 199898


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,392,967
Number of Sequences: 3902068
Number of extensions: 4392967
Number of successful extensions: 79835
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79755
Number of HSP's gapped (non-prelim): 80
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)