ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags33h10 |
|---|---|
| Clone Library Name | barley_pub |
>TIP1_RAT (Q9QYU7) TGF-beta-inducible nuclear protein 1 (Protein CDK105)| Length = 260 Score = 138 bits (347), Expect = 7e-33 Identities = 65/83 (78%), Positives = 73/83 (87%) Frame = -3 Query: 440 FXKAHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVV 261 F KAHVTH ELK TF L I+ VKKNP+ P+YT+LGV+T+GT+IEVNVSELG VT GKV+ Sbjct: 178 FKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVI 237 Query: 260 WGKYAQVTNNPENDGCINAVLLV 192 WGKYAQVTNNPENDGCINAVLLV Sbjct: 238 WGKYAQVTNNPENDGCINAVLLV 260
>TIP1_MOUSE (Q9CR47) TGF-beta-inducible nuclear protein 1 (L-name-related| protein 42) (LNR42) Length = 260 Score = 138 bits (347), Expect = 7e-33 Identities = 65/83 (78%), Positives = 73/83 (87%) Frame = -3 Query: 440 FXKAHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVV 261 F KAHVTH ELK TF L I+ VKKNP+ P+YT+LGV+T+GT+IEVNVSELG VT GKV+ Sbjct: 178 FKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVI 237 Query: 260 WGKYAQVTNNPENDGCINAVLLV 192 WGKYAQVTNNPENDGCINAVLLV Sbjct: 238 WGKYAQVTNNPENDGCINAVLLV 260
>TIP1_HUMAN (O95478) TGF-beta-inducible nuclear protein 1 (Hairy cell leukemia| protein 1) Length = 260 Score = 138 bits (347), Expect = 7e-33 Identities = 65/83 (78%), Positives = 73/83 (87%) Frame = -3 Query: 440 FXKAHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVV 261 F KAHVTH ELK TF L I+ VKKNP+ P+YT+LGV+T+GT+IEVNVSELG VT GKV+ Sbjct: 178 FKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVI 237 Query: 260 WGKYAQVTNNPENDGCINAVLLV 192 WGKYAQVTNNPENDGCINAVLLV Sbjct: 238 WGKYAQVTNNPENDGCINAVLLV 260
>TIP1_BOVIN (Q3SX11) TGF-beta-inducible nuclear protein 1| Length = 260 Score = 138 bits (347), Expect = 7e-33 Identities = 65/83 (78%), Positives = 73/83 (87%) Frame = -3 Query: 440 FXKAHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVV 261 F KAHVTH ELK TF L I+ VKKNP+ P+YT+LGV+T+GT+IEVNVSELG VT GKV+ Sbjct: 178 FKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVI 237 Query: 260 WGKYAQVTNNPENDGCINAVLLV 192 WGKYAQVTNNPENDGCINAVLLV Sbjct: 238 WGKYAQVTNNPENDGCINAVLLV 260
>YEV6_YEAST (P40078) Hypothetical 29.7 kDa protein in RSP5-LCP5 intergenic| region Length = 261 Score = 124 bits (310), Expect = 1e-28 Identities = 60/81 (74%), Positives = 67/81 (82%) Frame = -3 Query: 434 KAHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWG 255 KA+VTH EL T L I++VKKNP PMYT LGV+T+GTIIEVNVSELG VT GKVVWG Sbjct: 181 KANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTAGGKVVWG 240 Query: 254 KYAQVTNNPENDGCINAVLLV 192 KYAQVTN P+ DGC+NAVLLV Sbjct: 241 KYAQVTNEPDRDGCVNAVLLV 261
>RS8E_PICTO (Q6L0D3) 30S ribosomal protein S8e| Length = 125 Score = 42.4 bits (98), Expect = 5e-04 Identities = 29/79 (36%), Positives = 41/79 (51%) Frame = -3 Query: 431 AHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGK 252 A+V + + K T + I +VK+N P Y +M RGT+I +ELG Sbjct: 62 ANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVIS---TELGD----------- 107 Query: 251 YAQVTNNPENDGCINAVLL 195 A++T+ P DG INAVLL Sbjct: 108 -ARITSRPGQDGVINAVLL 125
>RS8E_SULAC (Q4JAP5) 30S ribosomal protein S8e| Length = 128 Score = 38.9 bits (89), Expect = 0.006 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = -3 Query: 431 AHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGK 252 A+V + K + IISV ++P Y G++ +GT+I+ +ELG Sbjct: 63 ANVYDPQSKTAKKVKIISVLESPANREYARRGIIVKGTLIQ---TELGK----------- 108 Query: 251 YAQVTNNPENDGCINAVLL 195 A+VT+ P DG INA+LL Sbjct: 109 -AKVTSRPGQDGIINALLL 126
>RS8E_THEVO (Q97BA2) 30S ribosomal protein S8e| Length = 127 Score = 37.7 bits (86), Expect = 0.013 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 II+VK+NP Y ++ +GTII + E A VT+ P DG IN Sbjct: 78 IITVKENPANSHYVQRNIINKGTIISTEIGE---------------AIVTSRPGQDGVIN 122 Query: 206 AVLL 195 A LL Sbjct: 123 AKLL 126
>RS8E_PYRHO (O58830) 30S ribosomal protein S8e| Length = 127 Score = 36.2 bits (82), Expect = 0.037 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVLENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 206 AVLL 195 A+LL Sbjct: 122 AILL 125
>RS8E_PYRKO (Q5JGF3) 30S ribosomal protein S8e| Length = 130 Score = 36.2 bits (82), Expect = 0.037 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 I++V +NP Y ++T+G IIE T GK + VT+ P DG +N Sbjct: 77 ILNVVENPANRQYARRNIITKGAIIE---------TEIGKAI------VTSRPGQDGVVN 121 Query: 206 AVLL 195 AVL+ Sbjct: 122 AVLI 125
>RS8E_SULTO (Q976K3) 30S ribosomal protein S8e| Length = 128 Score = 35.8 bits (81), Expect = 0.048 Identities = 24/79 (30%), Positives = 40/79 (50%) Frame = -3 Query: 431 AHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGK 252 A++ + K + I+SV + P Y G++ +G+II+ +ELG Sbjct: 63 ANIYDPQEKVSKKAKILSVIETPANKEYARRGIIVKGSIIQ---TELGK----------- 108 Query: 251 YAQVTNNPENDGCINAVLL 195 A+VT+ P DG INA+L+ Sbjct: 109 -AKVTSRPGQDGTINAILI 126
>RS8E_PYRFU (Q8U1Y5) 30S ribosomal protein S8e| Length = 127 Score = 35.8 bits (81), Expect = 0.048 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVIENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 206 AVLL 195 A+LL Sbjct: 122 AILL 125
>RS8E_PYRAB (Q9UZL4) 30S ribosomal protein S8e| Length = 127 Score = 35.8 bits (81), Expect = 0.048 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVIENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 206 AVLL 195 A+LL Sbjct: 122 AILL 125
>RS8E_ARCFU (O28130) 30S ribosomal protein S8e| Length = 125 Score = 35.8 bits (81), Expect = 0.048 Identities = 21/66 (31%), Positives = 33/66 (50%) Frame = -3 Query: 392 LDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGC 213 ++I SV +NP Y V+T+G II ++ + A+VTN P +G Sbjct: 74 VEIESVVENPAHVHYARRNVITKGAIIATSIGK---------------ARVTNRPSQEGV 118 Query: 212 INAVLL 195 +NAVL+ Sbjct: 119 VNAVLI 124
>RS8E_THEAC (Q9HJD0) 30S ribosomal protein S8e| Length = 127 Score = 35.4 bits (80), Expect = 0.063 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 II+VK NP Y ++ +GT+I + + A VT+ P DG IN Sbjct: 78 IITVKANPANSHYVQRNIINKGTVIATEIGD---------------AVVTSRPGQDGVIN 122 Query: 206 AVLL 195 A LL Sbjct: 123 AKLL 126
>RS8E_NANEQ (P61301) 30S ribosomal protein S8e| Length = 127 Score = 35.4 bits (80), Expect = 0.063 Identities = 20/69 (28%), Positives = 34/69 (49%) Frame = -3 Query: 401 TFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPEN 222 T I+ NP+ + +G++T+G I+E +ELG V ++T+ P Sbjct: 73 TVKAKIVRFLDNPSNRNFARMGILTKGAIVE---TELGKV------------KITSRPGQ 117 Query: 221 DGCINAVLL 195 DG +N VL+ Sbjct: 118 DGVLNGVLI 126
>RS8E_METJA (P54055) 30S ribosomal protein S8e| Length = 129 Score = 35.4 bits (80), Expect = 0.063 Identities = 23/79 (29%), Positives = 36/79 (45%) Frame = -3 Query: 431 AHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGK 252 A+V E + II+V++N Y V+T+G IIE + Sbjct: 64 ANVLDPETGTCKKVKIITVRENKANIHYVRRNVITKGAIIETEIG--------------- 108 Query: 251 YAQVTNNPENDGCINAVLL 195 A+VT+ P DG +NA+L+ Sbjct: 109 LAKVTSRPGQDGTVNAILI 127
>RS8E_METKA (Q8TV55) 30S ribosomal protein S8e| Length = 133 Score = 35.0 bits (79), Expect = 0.082 Identities = 24/73 (32%), Positives = 33/73 (45%) Frame = -3 Query: 413 ELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTN 234 E+KC + I V KNP Y GV+T+G II + A+VTN Sbjct: 72 EVKC---VRIEEVVKNPASQYYERHGVITKGAIIRTEIG---------------LAKVTN 113 Query: 233 NPENDGCINAVLL 195 P + +NAVL+ Sbjct: 114 RPGQEPVVNAVLI 126
>RS8E_HALMA (P49402) 30S ribosomal protein S8e (HS23)| Length = 123 Score = 34.7 bits (78), Expect = 0.11 Identities = 20/69 (28%), Positives = 33/69 (47%) Frame = -3 Query: 401 TFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPEN 222 T I +V +NP+ P Y ++T+G I+E + + A+VT+ P Sbjct: 69 TIEATIENVVENPSNPNYARRNIITKGAILETSEGQ---------------ARVTSRPGQ 113 Query: 221 DGCINAVLL 195 G +NAVL+ Sbjct: 114 HGQVNAVLV 122
>PER_DROPS (P12348) Period circadian protein| Length = 1241 Score = 33.1 bits (74), Expect = 0.31 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +1 Query: 82 GSIPKTSMNCNTDKIALVRPDTNSALIPSTRIVSKLHTSKTALIQPSFSG---LFVT*AY 252 G+ PK N+ + P+ A IP V HT+ TA+ Q SFS LF T Y Sbjct: 940 GNKPKQQPTLNSVGVGTGAPE---APIPP---VHPTHTTHTAIAQSSFSAQQSLFPTFYY 993 Query: 253 LPQTTFPAGVTGPSSLTFT 309 +P T A P +L+ T Sbjct: 994 IPATPLAASTPAPGALSPT 1012
>RS8E_METMP (P61300) 30S ribosomal protein S8e| Length = 128 Score = 32.7 bits (73), Expect = 0.41 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 + +V N Y VMT+G IIE T GK A+VT+ P DG +N Sbjct: 78 VTNVIDNKANKHYIRRNVMTKGAIIE---------TEMGK------AKVTSRPGQDGVVN 122 Query: 206 AVLL 195 A+LL Sbjct: 123 AILL 126
>RS8E_METMA (Q8PVC6) 30S ribosomal protein S8e| Length = 125 Score = 32.7 bits (73), Expect = 0.41 Identities = 24/79 (30%), Positives = 37/79 (46%) Frame = -3 Query: 431 AHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGK 252 A++T+ + T I +V N Y ++T+G++I TP G Sbjct: 61 ANITNPKDGKTVTATIETVIDNTANKHYVRRNILTKGSVIR---------TPVGT----- 106 Query: 251 YAQVTNNPENDGCINAVLL 195 A+VT+ P DG INAVL+ Sbjct: 107 -ARVTSRPGQDGVINAVLI 124
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 32.3 bits (72), Expect = 0.53 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = +3 Query: 168 NQNCIKASHEQDSIDTAIILRVICNLSVFAPNNF--SSRGYGTKFTNIHLDNCSPRHNTK 341 N N A Q I +A + F+ +F +S G GT +N+ D+CS R N+K Sbjct: 725 NNNTSFAQDVQSQITSASF----ADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSK 780 Query: 342 RSVHWTVWVFLHRNYVEVERT 404 S + R Y +V++T Sbjct: 781 GSSWQKIATPRVRTYTKVQKT 801
>TRPE_THEMA (Q08653) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 461 Score = 32.0 bits (71), Expect = 0.70 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +1 Query: 259 QTTFPAG-VTGPSSLTFTSIIVPLVITPREVYIGPFGFF-FTEIMSRLNV 402 + TFPAG V+G + II L TPR Y G G+F F + R+N+ Sbjct: 353 EATFPAGTVSGAPKVRAMEIIEELEPTPRGPYAGAVGYFSFPDDKGRMNM 402
>RS8E_PYRAE (Q8ZTB8) 30S ribosomal protein S8e| Length = 131 Score = 31.6 bits (70), Expect = 0.91 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 IIS+ P P + + +G++I+ V + A VT+ P DG IN Sbjct: 82 IISIISTPANPDFARRNFIVKGSVIQTEVGK---------------ALVTSRPGQDGVIN 126 Query: 206 AVLL 195 AVL+ Sbjct: 127 AVLI 130
>RS8E_METAC (Q8TS82) 30S ribosomal protein S8e| Length = 125 Score = 30.8 bits (68), Expect = 1.6 Identities = 21/79 (26%), Positives = 36/79 (45%) Frame = -3 Query: 431 AHVTHXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGK 252 A+VT+ + T I +V N Y ++T+G++I ++ Sbjct: 61 ANVTNPKDGKTVTAPIETVIDNTANKHYVRRNILTKGSVIRTSMGT-------------- 106 Query: 251 YAQVTNNPENDGCINAVLL 195 A+VT+ P DG +NAVL+ Sbjct: 107 -ARVTSRPGQDGVVNAVLI 124
>VG65_ICHV1 (Q00106) Hypothetical gene 65 protein| Length = 1434 Score = 30.8 bits (68), Expect = 1.6 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -3 Query: 308 VNVSELGPVTPAGKVVWGKYAQVTNNPE 225 VN +GP+TP+ V GKY V +PE Sbjct: 690 VNPPYVGPITPSASVPTGKYIHVMKHPE 717
>RMT2_CANGA (Q6FMP0) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 412 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Frame = +1 Query: 58 QLDITLESGS--IPKTSMNCNTDKIALVRPDTNSALIPSTRIVSKLHTSKTALI 213 ++DI E+ + +PK +++ +T K++ V D +A P T + +KL ++ ALI Sbjct: 157 EIDICAEASAEVVPKDALDDSTGKVSSVSDDDATAADPDTYLNTKLKYTEDALI 210
>TOP2_ASFM2 (P34203) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1191 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -3 Query: 374 KKNPNGPMYTSLGVMTRGTIIEVNVSELGPV-TPAGKVVWGKYAQVTNNPENDGCINAV 201 K NP+GP + G+++ G +I ++ + T +G+ + + Q+TNN G + + Sbjct: 453 KSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVL 511
>TOP2_ASFB7 (Q00942) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1192 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -3 Query: 374 KKNPNGPMYTSLGVMTRGTIIEVNVSELGPV-TPAGKVVWGKYAQVTNNPENDGCINAV 201 K NP+GP + G+++ G +I ++ + T +G+ + + Q+TNN G + + Sbjct: 454 KSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVL 512
>WRK46_ARATH (Q9SKD9) Probable WRKY transcription factor 46 (WRKY DNA-binding| protein 46) Length = 295 Score = 29.3 bits (64), Expect = 4.5 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Frame = +3 Query: 144 YKQCTHPFNQNCIKASHEQDSIDTAIILRVICNLSVFAPNNFSSRGYGTKF----TNIHL 311 Y +CTH F Q+C+ Q S DT L + L NN +S T F TN ++ Sbjct: 126 YYRCTHRFTQDCLAVKQVQKS-DTDPSLFEVKYLGNHTCNNITSPKTTTNFSVSLTNTNI 184 Query: 312 DNCSPRHNTKRS 347 + H T++S Sbjct: 185 FEGNRVHVTEQS 196
>TRUA2_DESPS (Q6AKP0) tRNA pseudouridine synthase A 2 (EC 5.4.99.12)| (tRNA-uridine isomerase I 2) (tRNA pseudouridylate synthase I 2) Length = 261 Score = 29.3 bits (64), Expect = 4.5 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 9/54 (16%) Frame = +3 Query: 201 DSI--DTAIILRVICNLSVFAPN--NFSSRGYGTKF-----TNIHLDNCSPRHN 335 DSI D +LR C L V + NFSSRG GT F +IH N SP N Sbjct: 141 DSIGPDDLALLRSACRLFVGRHDFYNFSSRGSGTSFREIFYCDIHRANFSPLAN 194
>RS8E_HALSA (Q9HPE9) 30S ribosomal protein S8e| Length = 124 Score = 29.3 bits (64), Expect = 4.5 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 I V N P Y ++T+G IIE T AG A+VT+ P DG +N Sbjct: 74 IEDVSANDANPNYARRNIITKGAIIE---------TDAGT------ARVTSRPGQDGQVN 118 Query: 206 A 204 A Sbjct: 119 A 119
>ATG4_ASHGO (Q75E61) Probable cysteine protease ATG4 (EC 3.4.22.-)| (Autophagy-related protein 4) Length = 521 Score = 28.9 bits (63), Expect = 5.9 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 Query: 419 HXELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEV 306 H L T+ + + ++PNGP S+ VM R + V Sbjct: 121 HTRLHFTYRTRFVPIPRHPNGPSPMSISVMLRDNPLNV 158
>RS8E_AERPE (Q9YDY0) 30S ribosomal protein S8e| Length = 136 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = -3 Query: 386 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGPVTPAGKVVWGKYAQVTNNPENDGCIN 207 I+ + + P Y G++ +G +I+ T G+ V VT+ P +G +N Sbjct: 81 ILRIVETPAHREYARRGIIVKGAVID---------TTLGRAV------VTSRPGQEGVVN 125 Query: 206 AVLL 195 AVLL Sbjct: 126 AVLL 129
>PGPLA_DROME (Q95T64) Peptidoglycan-recognition protein-LA| Length = 368 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/68 (30%), Positives = 29/68 (42%) Frame = +1 Query: 184 KLHTSKTALIQPSFSGLFVT*AYLPQTTFPAGVTGPSSLTFTSIIVPLVITPREVYIGPF 363 +LH +A S SGL LPQ F PSS+ + +VI P Y GP Sbjct: 28 RLHNLTSAGSSTSSSGL-----PLPQNIFTNPAIQPSSVINLNHSTDVVIGPMTQYQGPV 82 Query: 364 GFFFTEIM 387 ++ + M Sbjct: 83 SIYYMDYM 90
>MPIP3_PIG (Q29029) M-phase inducer phosphatase 3 (EC 3.1.3.48) (Dual| specificity phosphatase Cdc25C) Length = 502 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = -3 Query: 374 KKNPNGPMYTSLGVMTRGTIIEVNVSELG-PVTPAGKV 264 +K P GP + L ++ G ++E + LG P+T K+ Sbjct: 165 QKRPGGPYMSPLSLLDNGNLVEGEMKHLGSPITAVSKL 202 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,306,719 Number of Sequences: 219361 Number of extensions: 1330736 Number of successful extensions: 3254 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3240 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
