ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL117337.26|HSA393J16 Human DNA sequence from clone RP11-393... 46 0.15
2gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, ... 46 0.15
3gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 2.3
4emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.3
5gb|AC069242.13| Homo sapiens 3 BAC RP11-554J1 (Roswell Park Canc... 42 2.3
6emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in l... 42 2.3
7gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, comple... 42 2.3
8gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 2.3
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
10gb|AC117457.11| Homo sapiens 3 BAC RP11-385J1 (Roswell Park Canc... 42 2.3
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
12emb|AL713935.5|CNS07YPG Oryza sativa chromosome 12, . BAC OJ1427... 42 2.3
13ref|XM_467767.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.1
14gb|AC012162.11| Drosophila melanogaster clone BACR01N10, complet... 40 9.1
15gb|BC056168.1| Mus musculus coatomer protein complex, subunit ga... 40 9.1
16gb|BC024896.1| Mus musculus coatomer protein complex, subunit ga... 40 9.1
17gb|BC024686.1| Mus musculus coatomer protein complex, subunit ga... 40 9.1
18ref|XM_959344.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.1
19ref|XM_330384.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.1
20ref|NM_201244.1| Mus musculus coatomer protein complex, subunit ... 40 9.1
21ref|NM_017477.1| Mus musculus coatomer protein complex, subunit ... 40 9.1
22ref|XM_505032.1| Yarrowia lipolytica CLIB122, YALI0F05434g predi... 40 9.1
23emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 9.1
24dbj|AK151816.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.1
25dbj|AK147895.1| Mus musculus melanocyte cDNA, RIKEN full-length ... 40 9.1
26dbj|AK164280.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 9.1
27dbj|AK151284.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.1
28dbj|AK153142.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.1
29dbj|AK171950.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 9.1
30dbj|AK169256.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 40 9.1
31dbj|AK172519.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 9.1
32gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 9.1
33dbj|AK077461.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 9.1
34gb|AC155318.2| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 9.1
35dbj|AK080451.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 9.1
36dbj|AK049417.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 9.1
37dbj|AK018151.1| Mus musculus adult male medulla oblongata cDNA, ... 40 9.1
38dbj|AK014595.1| Mus musculus 0 day neonate skin cDNA, RIKEN full... 40 9.1
39gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Canc... 40 9.1
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
41gb|AF187079.1|AF187079 Mus musculus coat protein gamma-cop (Copg... 40 9.1
42gb|AC011745.4|AC011745 Homo sapiens BAC clone RP11-329C15 from Y... 40 9.1
43dbj|AK206833.1| Mus musculus cDNA, clone:Y2G0106B09, strand:minu... 40 9.1
44dbj|AK187461.1| Mus musculus cDNA, clone:Y0G0141O16, strand:minu... 40 9.1
45dbj|AK184926.1| Mus musculus cDNA, clone:Y0G0131P20, strand:plus... 40 9.1
46dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
47dbj|AK103517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
48gb|AE003506.3| Drosophila melanogaster chromosome X, section 58 ... 40 9.1
49emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 9.1
50emb|AL596263.8| Mouse DNA sequence from clone RP23-392O2 on chro... 40 9.1 
>emb|AL117337.26|HSA393J16 Human DNA sequence from clone RP11-393J16 on chromosome 10 Contains a
              zinc finger protein pseudogene, the ZNF25 gene for zinc
              finger protein 25 (KOX 19), the 5' end of the ZNF33A gene
              for zinc finger protein 33a (KOX 31) and two CpG islands,
              complete sequence
          Length = 161452

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 570    ttcttcaacaaattgtgggtgtt 592
              |||||||||||||||||||||||
Sbjct: 140514 ttcttcaacaaattgtgggtgtt 140492
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>gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, partial sequence, complete
              sequence
          Length = 312283

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 570    ttcttcaacaaattgtgggtgtt 592
              |||||||||||||||||||||||
Sbjct: 219995 ttcttcaacaaattgtgggtgtt 219973
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 340     gggtgcgcggcgacctcctgctgcg 364
               |||||||||||||| ||||||||||
Sbjct: 1518357 gggtgcgcggcgacatcctgctgcg 1518381
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 340     gggtgcgcggcgacctcctgctgcg 364
               |||||||||||||| ||||||||||
Sbjct: 2853103 gggtgcgcggcgacatcctgctgcg 2853127
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>gb|AC069242.13| Homo sapiens 3 BAC RP11-554J1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184664

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 406   ctttcataaatgatattagcttgat 430
             |||||||||||||| ||||||||||
Sbjct: 58711 ctttcataaatgattttagcttgat 58687
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>emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in linkage group 15,
             complete sequence
          Length = 155540

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 576   aacaaattgtgggtgttgcat 596
             |||||||||||||||||||||
Sbjct: 32894 aacaaattgtgggtgttgcat 32914
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>gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, complete sequence
          Length = 166300

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 406   ctttcataaatgatattagcttgat 430
             |||||||||||||| ||||||||||
Sbjct: 67732 ctttcataaatgatgttagcttgat 67708
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 340    gggtgcgcggcgacctcctgctgcg 364
              |||||||||||||| ||||||||||
Sbjct: 385167 gggtgcgcggcgacatcctgctgcg 385143
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 347     cggcgacctcctgctgcggca 367
               |||||||||||||||||||||
Sbjct: 6805832 cggcgacctcctgctgcggca 6805852
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>gb|AC117457.11| Homo sapiens 3 BAC RP11-385J1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 204899

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 377   ctctaggaaggaatgcatcac 397
             |||||||||||||||||||||
Sbjct: 62548 ctctaggaaggaatgcatcac 62568
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 347     cggcgacctcctgctgcggca 367
               |||||||||||||||||||||
Sbjct: 6805711 cggcgacctcctgctgcggca 6805731
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>emb|AL713935.5|CNS07YPG Oryza sativa chromosome 12, . BAC OJ1427_C06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 88558

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 347   cggcgacctcctgctgcggca 367
             |||||||||||||||||||||
Sbjct: 12696 cggcgacctcctgctgcggca 12676
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>ref|XM_467767.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2018

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 175  gatcatctgtatgctggtgcgccagcaaagga 206
            |||||||  ||||||||||| |||||||||||
Sbjct: 1587 gatcatcgatatgctggtgcaccagcaaagga 1556
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>gb|AC012162.11| Drosophila melanogaster clone BACR01N10, complete sequence
          Length = 169856

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 446   catgaggagcaggagcagca 465
             ||||||||||||||||||||
Sbjct: 56725 catgaggagcaggagcagca 56744
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>gb|BC056168.1| Mus musculus coatomer protein complex, subunit gamma, mRNA (cDNA
           clone IMAGE:5699665), complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 82  gtcgaatttcttcaacatgg 63
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>gb|BC024896.1| Mus musculus coatomer protein complex, subunit gamma, mRNA (cDNA
           clone MGC:28506 IMAGE:4189311), complete cds
          Length = 2942

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 82  gtcgaatttcttcaacatgg 63
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>gb|BC024686.1| Mus musculus coatomer protein complex, subunit gamma, mRNA (cDNA
           clone MGC:30335 IMAGE:3992144), complete cds
          Length = 2945

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 85  gtcgaatttcttcaacatgg 66
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>ref|XM_959344.1| Neurospora crassa OR74A hypothetical protein (NCU09735.1) partial
           mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gacgaccctagctacaccaa 126
           ||||||||||||||||||||
Sbjct: 466 gacgaccctagctacaccaa 485
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>ref|XM_330384.1| Neurospora crassa OR74A hypothetical protein (NCU09735.1) partial
           mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gacgaccctagctacaccaa 126
           ||||||||||||||||||||
Sbjct: 466 gacgaccctagctacaccaa 485
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>ref|NM_201244.1| Mus musculus coatomer protein complex, subunit gamma (Copg),
           transcript variant 2, mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 82  gtcgaatttcttcaacatgg 63
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>ref|NM_017477.1| Mus musculus coatomer protein complex, subunit gamma (Copg),
           transcript variant 1, mRNA
          Length = 4017

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 113 gtcgaatttcttcaacatgg 94
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>ref|XM_505032.1| Yarrowia lipolytica CLIB122, YALI0F05434g predicted mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ttgatgtggatggtatgaac 445
            ||||||||||||||||||||
Sbjct: 1727 ttgatgtggatggtatgaac 1746
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>emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              5/8
          Length = 348408

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    aagcaccacggtagatctca 327
              ||||||||||||||||||||
Sbjct: 265663 aagcaccacggtagatctca 265682
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>dbj|AK151816.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830038J23 product:coatomer
           protein complex, subunit gamma, full insert sequence
          Length = 2964

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 119 gtcgaatttcttcaacatgg 100
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>dbj|AK147895.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library,
           clone:G270085C15 product:coatomer protein complex,
           subunit gamma, full insert sequence
          Length = 2960

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 127 gtcgaatttcttcaacatgg 108
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>dbj|AK164280.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030064N22 product:coatomer
           protein complex, subunit gamma, full insert sequence
          Length = 2917

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 84  gtcgaatttcttcaacatgg 65
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>dbj|AK151284.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830027K12 product:coatomer
           protein complex, subunit gamma, full insert sequence
          Length = 2964

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 119 gtcgaatttcttcaacatgg 100
to top
>dbj|AK153142.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830124P21 product:coatomer
           protein complex, subunit gamma, full insert sequence
          Length = 2964

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 119 gtcgaatttcttcaacatgg 100
to top
>dbj|AK171950.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830021F17 product:coatomer protein
           complex, subunit gamma, full insert sequence
          Length = 2927

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 93  gtcgaatttcttcaacatgg 74
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>dbj|AK169256.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920099G05 product:coatomer protein
           complex, subunit gamma, full insert sequence
          Length = 4053

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 159 gtcgaatttcttcaacatgg 140
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>dbj|AK172519.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830212C18 product:coatomer protein
           complex, subunit gamma, full insert sequence
          Length = 4028

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 130 gtcgaatttcttcaacatgg 111
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 444     accatgaggagcaggagcag 463
               ||||||||||||||||||||
Sbjct: 2110060 accatgaggagcaggagcag 2110041
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>dbj|AK077461.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730412D09 product:coatomer
           protein complex, subunit gamma 1, full insert sequence
          Length = 3957

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 61  gtcgaatttcttcaacatgg 42
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>gb|AC155318.2| Ornithorhynchus anatinus chromosome UNK clone OABb-158A1, complete
             sequence
          Length = 163918

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   cagcaggcccctggagattt 255
             ||||||||||||||||||||
Sbjct: 41905 cagcaggcccctggagattt 41886
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>dbj|AK080451.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730016G05 product:coatomer
           protein complex, subunit gamma 1, full insert sequence
          Length = 875

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 86  gtcgaatttcttcaacatgg 67
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>dbj|AK049417.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:C430005L08 product:coatomer
           protein complex, subunit gamma 1, full insert sequence
          Length = 2898

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 65  gtcgaatttcttcaacatgg 46
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>dbj|AK018151.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330409F01 product:coatomer
           protein complex, subunit gamma 1, full insert sequence
          Length = 837

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 44  gtcgaatttcttcaacatgg 25
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>dbj|AK014595.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
           library, clone:4632427M03 product:coatomer protein
           complex, subunit gamma 1, full insert sequence
          Length = 2758

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 97  gtcgaatttcttcaacatgg 78
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>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203418

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 509   gtcgaatttcttcaacatgg 528
             ||||||||||||||||||||
Sbjct: 69424 gtcgaatttcttcaacatgg 69405
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 175      gatcatctgtatgctggtgcgccagcaaagga 206
                |||||||  ||||||||||| |||||||||||
Sbjct: 31317139 gatcatcgatatgctggtgcaccagcaaagga 31317108
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>gb|AF187079.1|AF187079 Mus musculus coat protein gamma-cop (Copg1) mRNA, complete cds
          Length = 4017

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 113 gtcgaatttcttcaacatgg 94
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>gb|AC011745.4|AC011745 Homo sapiens BAC clone RP11-329C15 from Y, complete sequence
          Length = 149525

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    tattagcttgatgtggatgg 438
              ||||||||||||||||||||
Sbjct: 113009 tattagcttgatgtggatgg 112990
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>dbj|AK206833.1| Mus musculus cDNA, clone:Y2G0106B09, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000032139, based on BLAT search
          Length = 135

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 28  gtcgaatttcttcaacatgg 9
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>dbj|AK187461.1| Mus musculus cDNA, clone:Y0G0141O16, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000032139, based on BLAT search
          Length = 135

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 28  gtcgaatttcttcaacatgg 9
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>dbj|AK184926.1| Mus musculus cDNA, clone:Y0G0131P20, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000042726, based on BLAT search
          Length = 284

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 509 gtcgaatttcttcaacatgg 528
           ||||||||||||||||||||
Sbjct: 108 gtcgaatttcttcaacatgg 127
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>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1118_G04
          Length = 134464

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 175   gatcatctgtatgctggtgcgccagcaaagga 206
             |||||||  ||||||||||| |||||||||||
Sbjct: 87007 gatcatcgatatgctggtgcaccagcaaagga 86976
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>dbj|AK103517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131H10, full
            insert sequence
          Length = 2019

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 175  gatcatctgtatgctggtgcgccagcaaagga 206
            |||||||  ||||||||||| |||||||||||
Sbjct: 1588 gatcatcgatatgctggtgcaccagcaaagga 1557
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>gb|AE003506.3| Drosophila melanogaster chromosome X, section 58 of 74 of the complete
              sequence
          Length = 302073

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    catgaggagcaggagcagca 465
              ||||||||||||||||||||
Sbjct: 267979 catgaggagcaggagcagca 267960
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    ttgatgtggatggtatgaac 445
              ||||||||||||||||||||
Sbjct: 816272 ttgatgtggatggtatgaac 816291
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>emb|AL596263.8| Mouse DNA sequence from clone RP23-392O2 on chromosome 2, complete
             sequence
          Length = 100060

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   tttcataaatgatattagct 426
             ||||||||||||||||||||
Sbjct: 85292 tttcataaatgatattagct 85311


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,077,895
Number of Sequences: 3902068
Number of extensions: 5077895
Number of successful extensions: 109012
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108786
Number of HSP's gapped (non-prelim): 226
length of query: 666
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 643
effective length of database: 17,143,297,704
effective search space: 11023140423672
effective search space used: 11023140423672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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