| Clone Name | rbaal2c12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MS2_ARATH (Q08891) Male sterility protein 2 | 48 | 6e-06 | 2 | ACCO2_DORSP (Q39705) 1-aminocyclopropane-1-carboxylate oxidase 2... | 28 | 6.2 | 3 | DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-re... | 28 | 8.1 |
|---|
>MS2_ARATH (Q08891) Male sterility protein 2| Length = 616 Score = 48.1 bits (113), Expect = 6e-06 Identities = 22/65 (33%), Positives = 36/65 (55%) Frame = -1 Query: 248 LYGPFSLFKGXFDDVNLNKLRLAMVDGDHANVNVGGLFNFDPKTLDWXDYFFKVHIPGVM 69 +Y P++ + G FD+ N +L M + + F FD +++W DY VHIPG+ Sbjct: 555 IYEPYTFYGGRFDNSNTQRLMENMSEDEKRE------FGFDVGSINWTDYITNVHIPGLR 608 Query: 68 KYVLK 54 ++VLK Sbjct: 609 RHVLK 613
>ACCO2_DORSP (Q39705) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) Length = 325 Score = 28.1 bits (61), Expect = 6.2 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -1 Query: 167 DHANVNVGGLFNFDPKTLDWXDYFFKVHIP 78 + A+ + + N DP LDW FF H+P Sbjct: 69 EFASKTLDSVENVDPDNLDWESTFFLRHLP 98
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -1 Query: 197 NKLRLAMVDGDHANVNVGGLFNFDPKTLDWXDYFFKVH 84 NKLR+ + + +G F FDPK L ++F +H Sbjct: 1085 NKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLH 1122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,088,607 Number of Sequences: 219361 Number of extensions: 350884 Number of successful extensions: 888 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 881 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 887 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)