>RS6B_ARATH (P51430) 40S ribosomal protein S6-2|
          Length = 249

 Score =  172 bits (437), Expect = 7e-43
 Identities = 88/115 (76%), Positives = 95/115 (82%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           LTDTEKPRMRGPKRASKI+KLFNLGK+DDVR YVNTYRRTF NKKGKKVSKAPKIQRLVT
Sbjct: 126 LTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQRLVT 185

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 356
           PLTLQ                 S+AA+YQKLLA RLKEQRDRRSES+AK+RS+LS
Sbjct: 186 PLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6|
          Length = 251

 Score =  166 bits (421), Expect = 5e-41
 Identities = 87/115 (75%), Positives = 92/115 (80%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           LTD EKPRMRGPKRASKI+KLFNL K+DDVR YVNTYRRTF NKKGK  SKAPKIQRLVT
Sbjct: 126 LTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKIQRLVT 185

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 356
           PLTLQ                KSEAAEYQKLLA RLKEQRDRRSES+AK+RS+LS
Sbjct: 186 PLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240

>RS6A_ARATH (O48549) 40S ribosomal protein S6-1|
          Length = 250

 Score =  166 bits (420), Expect = 6e-41
 Identities = 85/115 (73%), Positives = 94/115 (81%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           LTDTEKPRMRGPKRASKI+KLFNL K+DDVR+YVNTYRR F NKKGK+VSKAPKIQRLVT
Sbjct: 126 LTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVT 185

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 356
           PLTLQ                 S+AA+YQKLLA RLKEQRDRRSES+AK+RS+LS
Sbjct: 186 PLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)|
          Length = 199

 Score =  116 bits (291), Expect = 6e-26
 Identities = 68/115 (59%), Positives = 78/115 (67%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           LTDTEKPRMRGP+   + + L+   K+DDVR YVNT        KG   SKAPKIQRLVT
Sbjct: 81  LTDTEKPRMRGPREPQRSEALYF--KEDDVRKYVNTTAEFTTKWKG---SKAPKIQRLVT 135

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 356
           PLTLQ                KSEAAEYQKLLA RLKEQR++RSES+AK+RS+LS
Sbjct: 136 PLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQREKRSESLAKKRSRLS 190

>RS6_RAT (P62755) 40S ribosomal protein S6|
          Length = 249

 Score =  109 bits (272), Expect = 9e-24
 Identities = 64/112 (57%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTDT  PR  GPKRAS+I+KLFNL K+DDVR YV    R  LNK+GKK  +KAPKIQRLV
Sbjct: 124 LTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVV---RKPLNKEGKKPRTKAPKIQRLV 180

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRR 368
           TP  LQ                K EAAEY KLLA+R+KE +++R E +AKRR
Sbjct: 181 TPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232

>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  109 bits (272), Expect = 9e-24
 Identities = 64/112 (57%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTDT  PR  GPKRAS+I+KLFNL K+DDVR YV    R  LNK+GKK  +KAPKIQRLV
Sbjct: 124 LTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVV---RKPLNKEGKKPRTKAPKIQRLV 180

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRR 368
           TP  LQ                K EAAEY KLLA+R+KE +++R E +AKRR
Sbjct: 181 TPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232

>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  109 bits (272), Expect = 9e-24
 Identities = 64/112 (57%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTDT  PR  GPKRAS+I+KLFNL K+DDVR YV    R  LNK+GKK  +KAPKIQRLV
Sbjct: 124 LTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVV---RKPLNKEGKKPRTKAPKIQRLV 180

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRR 368
           TP  LQ                K EAAEY KLLA+R+KE +++R E +AKRR
Sbjct: 181 TPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232

>RS6_CHICK (P47838) 40S ribosomal protein S6|
          Length = 249

 Score =  108 bits (269), Expect = 2e-23
 Identities = 63/112 (56%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTDT  PR  GPKRAS+I+KLFNL K+DDVR YV    R  LNK+GKK  +KAPKIQRLV
Sbjct: 124 LTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVV---RKPLNKEGKKPRTKAPKIQRLV 180

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRR 368
           TP  LQ                K EAA+Y KLLA+R+KE +++R E +AKRR
Sbjct: 181 TPRVLQHKRRRIALKKQRTQKNKEEAADYAKLLAKRMKEAKEKRQEQIAKRR 232

>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6|
          Length = 249

 Score =  106 bits (264), Expect = 8e-23
 Identities = 63/112 (56%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTD+  PR  GPKRAS+I+KLFNL K+DDVR YV    R  L K+GKK  +KAPKIQRLV
Sbjct: 124 LTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYVV---RRPLTKEGKKPRTKAPKIQRLV 180

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRR 368
           TP  LQ                K EAAEY KLLA+RLKE +++R E +AKRR
Sbjct: 181 TPRVLQHKRRRIALKRQRTQKNKDEAAEYAKLLAKRLKEAKEKRQEKIAKRR 232

>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6|
          Length = 249

 Score =  104 bits (259), Expect = 3e-22
 Identities = 61/112 (54%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTD+  PR  GPKRASKI+KLFNL K+DDVR YV    R  L K+GKK  +KAP+IQRLV
Sbjct: 124 LTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYVV---RRPLTKEGKKPRTKAPRIQRLV 180

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRR 368
           TP  LQ                K EA+EY KLLA+R+KE +++R E +AKRR
Sbjct: 181 TPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRMKEAKEKRQEQIAKRR 232

>RS6_XENLA (P39017) 40S ribosomal protein S6|
          Length = 249

 Score =  101 bits (252), Expect = 2e-21
 Identities = 61/112 (54%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTD   PR  GPKRAS+I+KLFNL K+DDVR YV    R  L K+GKK  +KAPKIQRLV
Sbjct: 124 LTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYVV---RKPLAKEGKKPRTKAPKIQRLV 180

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRR 368
           TP  LQ                K EA+EY KLLA+R KE +++R E +AKRR
Sbjct: 181 TPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRSKEAKEKRQEQIAKRR 232

>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6|
          Length = 247

 Score = 99.4 bits (246), Expect = 9e-21
 Identities = 60/115 (52%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTD   PR  GPKRASKI+KLFNL K+DDVR YV   RR    + GKK  SKAPKIQRLV
Sbjct: 124 LTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPKIQRLV 181

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE-SMAKRRSK 362
           TP+ LQ                + + AEY KLLAQR+KE ++R+ E   +  RSK
Sbjct: 182 TPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMKEAKERKMERKRSNSRSK 236

>RS6_MANSE (Q94624) 40S ribosomal protein S6|
          Length = 253

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 59/116 (50%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSK----APKIQ 533
           LTD   PR  GPKRASKI+KLFNL K+DDVR YV   +     K+GK+ +K    APKIQ
Sbjct: 124 LTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKALLPAKEGKENAKPRYKAPKIQ 181

Query: 532 RLVTPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRS 365
           RLVTP+ LQ                KS  A+Y KLLAQR KE + RR E + +RRS
Sbjct: 182 RLVTPVVLQRRRHRLALKKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIKRRRS 237

>RS6_SPOFR (Q95V32) 40S ribosomal protein S6|
          Length = 253

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 58/116 (50%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVS----KAPKIQ 533
           LTD   PR  GPKRASKI+KLFNL K+DDVR YV   +R    K+GK+ +    KAPKIQ
Sbjct: 124 LTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRLLPAKEGKENAKPRYKAPKIQ 181

Query: 532 RLVTPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRS 365
           RLVTP+ LQ                K    +Y KLLAQR KE + RR E + +RRS
Sbjct: 182 RLVTPVVLQRRRHRLALKKKRLAKRKQSENDYAKLLAQRKKESKVRRQEELKRRRS 237

>RS6_DROME (P29327) 40S ribosomal protein S6|
          Length = 248

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 55/115 (47%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKK-VSKAPKIQRLV 524
           LTDT  PR  GPKRASKI+KL+NL K+DDVR +V   RR    K  KK  SKAPKIQRL+
Sbjct: 124 LTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNKKATSKAPKIQRLI 181

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           TP+ LQ                K  +A+Y KLL QR KE + +R E+  +R + +
Sbjct: 182 TPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREEAKRRRSASI 236

>RS6_BRAFL (O01727) 40S ribosomal protein S6|
          Length = 244

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 58/113 (51%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVS-KAPKIQRLV 524
           LTDT  PR  GPKRA +I+KLFNL K+DDVR YV   RR    K+GKK   K PKIQRL+
Sbjct: 124 LTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRPLPQKEGKKQKFKTPKIQRLI 181

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRS 365
           TP  LQ                + E A Y KLLA+R KE+R    E+ AKRRS
Sbjct: 182 TPQRLQRKRHMRAVKRRRYAKQREEEATYAKLLAKRKKEER----EAHAKRRS 230

>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6|
          Length = 236

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 55/114 (48%), Positives = 68/114 (59%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           LTDT  P+  GPKRA+ I+K F L K+DDVR +V   RR  + K  KK +KAPKIQRLVT
Sbjct: 124 LTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV--VRREVV-KGDKKYTKAPKIQRLVT 180

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           P TLQ                +  AAEY +LLAQRL E++  R+E   +R S L
Sbjct: 181 PQTLQRKRALKAQKVKNAQQQRDAAAEYAQLLAQRLHERKAERAEIKKRRASSL 234

>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A|
          Length = 239

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKK-VSKAPKIQRLV 524
           LTD   P+  GPKRASKI++ FNL K+DDVR +V   R     K+GKK  +KAPKIQRLV
Sbjct: 124 LTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLV 182

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           TP TLQ                + EAAE+ +L+A+R+ E + +R    A+R S L
Sbjct: 183 TPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKREVVKARRASSL 237

>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B|
          Length = 239

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKK-VSKAPKIQRLV 524
           LTD   P+  GPKRASKI++ FNL K+DDVR +V   R     K+GKK  +KAPKIQRLV
Sbjct: 124 LTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLV 182

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           TP TLQ                + EAAE+ +L+A+R+ E + ++    A+R S +
Sbjct: 183 TPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKKEVVKARRASSM 237

>RS6_YARLI (Q6C169) 40S ribosomal protein S6|
          Length = 242

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 51/114 (44%), Positives = 64/114 (56%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           LT    PR  GPKRA+ I+KLF L K+DDVR YV   RR    K GK  +KAPKIQRL+T
Sbjct: 124 LTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV--IRREVTTKSGKTYTKAPKIQRLIT 181

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           P  L                 K  AAEY +LLA+R+ E++  ++E   +R S L
Sbjct: 182 PRRLAHKAQLREKKVKAIQASKDAAAEYAQLLAKRVAEKKSEKAEEKKRRASSL 235

>RS6_AEDAE (Q9U761) 40S ribosomal protein S6|
          Length = 346

 Score = 87.0 bits (214), Expect = 5e-17
 Identities = 52/116 (44%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTDT  PR  GPKRAS I+KL+NL K+DDVR +V   +R    K GKK  +KAPKIQRL+
Sbjct: 124 LTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKKARTKAPKIQRLI 181

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 356
           TP+ LQ                K   AEY K+L  R +++R RR   ++  R   S
Sbjct: 182 TPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSRLSSMRDSRS 237

>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)|
          Length = 236

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 50/114 (43%), Positives = 65/114 (57%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           LTDT  P+  GPKRA+ I+K F L K+DDVR +V    R  + K  K  +KAPKIQRLVT
Sbjct: 124 LTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFVI---RREVTKGEKTYTKAPKIQRLVT 180

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           P  LQ                +  AAEY +LLA+RL E++  ++E   +R S L
Sbjct: 181 PQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIRKRRASSL 234

>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6|
          Length = 246

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 52/115 (45%), Positives = 67/115 (58%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           LTD+  PR  GPKRASKI+KLFNL K DDV  YV T+ +TF +   K +  APKIQRL+T
Sbjct: 124 LTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTI--APKIQRLIT 181

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 356
           P  +                 + +AA Y KLLA+  KE+ D +   +A+RRS  S
Sbjct: 182 PARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHDAK---IARRRSSAS 233

>RS6_AEDAL (Q9U762) 40S ribosomal protein S6|
          Length = 349

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 52/116 (44%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKV-SKAPKIQRLV 524
           LTDT   R  GPKRAS I+KL+NL K+DDVR YV   +R    K GKK  +KAPKIQRL+
Sbjct: 124 LTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGKKPRTKAPKIQRLI 181

Query: 523 TPLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKLS 356
           TP+ LQ                K   AEY K+L  R +++R RR   ++  R   S
Sbjct: 182 TPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSRLSSMRDSRS 237

>RS6_KLULA (Q6CM04) 40S ribosomal protein S6|
          Length = 236

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 48/114 (42%), Positives = 64/114 (56%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           +T+   P+  GPKRA+ I+K F L K+DDVR YV    R  + K  K  +KAPKIQRLVT
Sbjct: 124 ITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYVI---RREVTKGDKSYTKAPKIQRLVT 180

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           P  LQ                +  AAEY +LLA+RL E++  ++E   +R S L
Sbjct: 181 PQRLQRKRQQKSLKIKNAQAQREAAAEYAQLLAKRLSERKAEKAEVRKRRASSL 234

>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6|
          Length = 236

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 48/114 (42%), Positives = 65/114 (57%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           +TD   P+  GPKRA+ I+K F L K+DDVR +V    R  + K  K  +KAPKIQRLVT
Sbjct: 124 VTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVT 180

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           P  LQ                +  AAEY +LLA+RL E++  ++E+  +R S L
Sbjct: 181 PQRLQRKRYQRNLKVRNAQAQREAAAEYAQLLAKRLAERKAEKAETRKRRASSL 234

>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6|
          Length = 236

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 49/114 (42%), Positives = 65/114 (57%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           +T+   P+  GPKRA+ I+K F L KDDDVR +V   RR  + K  K  +KAPKIQRLVT
Sbjct: 124 ITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV--IRREVV-KGDKTYTKAPKIQRLVT 180

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           P  LQ                +  AAEY +LLA+RL E++  ++E   +R S L
Sbjct: 181 PQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLTEKKAEKAEERKRRASSL 234

>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)|
          Length = 235

 Score = 76.3 bits (186), Expect = 9e-14
 Identities = 49/114 (42%), Positives = 63/114 (55%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           +T+   P+  GPKRA+ I+K F L K+DDVR YV    R  + K  K  +KAPKIQRLVT
Sbjct: 124 VTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYVI---RREVTKGEKTYTKAPKIQRLVT 180

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESMAKRRSKL 359
           P  LQ                +  AAEY +LLA+RL E   R++E   +R S L
Sbjct: 181 PQRLQRKRQQKALKIKNAQAQREAAAEYAQLLAKRLAE---RKAEVRKRRASSL 231

>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6|
          Length = 249

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 46/111 (41%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           +TDT  PR  GPKRASKI+KLFNL + +DVR YV   RR  +    K   KAPKIQRL+T
Sbjct: 127 VTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV--VRRRVVKSGKKDRLKAPKIQRLIT 184

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLA--QRLKEQRDRRSESMAK 374
           P                     +E  EY +L+A  +R   QRD   +   K
Sbjct: 185 PRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQRDHSKKHTRK 235

>RS6_LEIIN (O44012) 40S ribosomal protein S6|
          Length = 249

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 46/111 (41%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = -1

Query: 700 LTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKKVSKAPKIQRLVT 521
           +TDT  PR  GPKRASKI+KLFNL + +DVR YV   RR  +    K   KAPKIQRL+T
Sbjct: 127 VTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV--VRRRVVKSGKKDRLKAPKIQRLIT 184

Query: 520 PLTLQXXXXXXXXXXXXXXXXKSEAAEYQKLLA--QRLKEQRDRRSESMAK 374
           P                     +E  EY +L+A  +R   QRD   +   K
Sbjct: 185 PRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQRDHSKKHTQK 235

>COX3_CHOCR (P48872) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide III)
          Length = 272

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 280 ATFSFLGLVIDAVLREHGYFIVGSFVTGVAFLCLYLMQFT 161
           A+       I  V+  H Y + GSF+  ++F CL L+ FT
Sbjct: 28  ASLCAFSCAIGGVMYMHAY-VNGSFILSISFFCLLLVMFT 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,273,081
Number of Sequences: 219361
Number of extensions: 1248330
Number of successful extensions: 3527
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3497
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)