>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 655   ttctaaatgatacccttcatg 675
             |||||||||||||||||||||
Sbjct: 55759 ttctaaatgatacccttcatg 55739

>gb|AY517480.1| Sulfolobus tengchongensis plasmid pTC, complete sequence
          Length = 20417

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 233  agaaacaagggaccaagaaac 253
            |||||||||||||||||||||
Sbjct: 5343 agaaacaagggaccaagaaac 5363

>gb|AC142333.1| Pan troglodytes BAC clone RP43-32G1 from 7, complete sequence
          Length = 173510

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 235   aaacaagggaccaagaaactg 255
             |||||||||||||||||||||
Sbjct: 81687 aaacaagggaccaagaaactg 81667

>emb|BX324130.5| Zebrafish DNA sequence from clone DKEY-30J16 in linkage group 11,
              complete sequence
          Length = 209188

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 429    accacaccatctgacttggta 449
              |||||||||||||||||||||
Sbjct: 115109 accacaccatctgacttggta 115129

>gb|AC097515.5| Homo sapiens BAC clone RP11-446J8 from 4, complete sequence
          Length = 165973

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 256   aaactttcattttgcagaaaa 276
             |||||||||||||||||||||
Sbjct: 84724 aaactttcattttgcagaaaa 84704

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 525      cccgacaatgatcaggccatg 545
                |||||||||||||||||||||
Sbjct: 24402874 cccgacaatgatcaggccatg 24402854

>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1792_D02
          Length = 141649

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 525   cccgacaatgatcaggccatg 545
             |||||||||||||||||||||
Sbjct: 31080 cccgacaatgatcaggccatg 31060

>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence
          Length = 209693

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 655    ttctaaatgatacccttcatg 675
              |||||||||||||||||||||
Sbjct: 127957 ttctaaatgatacccttcatg 127977

>gb|AC104540.9| Mus musculus chromosome 5, clone RP23-301P15, complete sequence
          Length = 221681

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    gaaactgaaactttcatttt 268
              ||||||||||||||||||||
Sbjct: 152771 gaaactgaaactttcatttt 152752

>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
              sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    tctccctctgggtaatcaat 403
              ||||||||||||||||||||
Sbjct: 579093 tctccctctgggtaatcaat 579112

>gb|AC005214.1| Homo sapiens chromosome 5, BAC clone 319C17 (LBNL H159), complete
             sequence
          Length = 50511

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tagtagcaccaactaatatg 52
             ||||||||||||||||||||
Sbjct: 49121 tagtagcaccaactaatatg 49140

>ref|XM_648473.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (79.t00007)
           partial mRNA
          Length = 1029

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 670 ttcatggaaataaaaccatt 689
           ||||||||||||||||||||
Sbjct: 96  ttcatggaaataaaaccatt 77

>gb|AC007033.3| Homo sapiens BAC clone RP11-28D14 from 7, complete sequence
          Length = 76385

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   atcaggccatgagccatcaa 554
             ||||||||||||||||||||
Sbjct: 45720 atcaggccatgagccatcaa 45739

>emb|CR954966.2| Mouse DNA sequence from clone WI1-2342H11 on chromosome X, complete
            sequence
          Length = 23417

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   gaaagtttagtagcaccaactaat 49
            |||| |||||||||||||||||||
Sbjct: 4199 gaaattttagtagcaccaactaat 4176

>emb|AL136453.3| Human DNA sequence from clone RP1-249K20 on chromosome 10, complete
            sequence
          Length = 98368

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  aacagaaacagtcagttctc 387
            ||||||||||||||||||||
Sbjct: 6089 aacagaaacagtcagttctc 6070

>emb|AL022145.1|HS423N22 Human DNA sequence from clone RP3-423N22 on chromosome 1q24-25 Contains
             part of the ASTN gene for astrotactin, complete sequence
          Length = 135007

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   aagggaccaagaaactgaaa 258
             ||||||||||||||||||||
Sbjct: 40113 aagggaccaagaaactgaaa 40094

>gb|AC090579.6| Homo sapiens chromosome 8, clone RP11-649G15, complete sequence
          Length = 186066

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    taataccacatcgaagcaaacatg 98
             ||||||||||| ||||||||||||
Sbjct: 82266 taataccacatggaagcaaacatg 82289

>gb|AC116353.2| Homo sapiens chromosome 5 clone RP11-515C16, complete sequence
          Length = 220535

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  tagtagcaccaactaatatg 52
           ||||||||||||||||||||
Sbjct: 402 tagtagcaccaactaatatg 383

>gb|AE005945.1| Caulobacter crescentus CB15 section 271 of 359 of the complete genome
          Length = 13348

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 620  cagcgcttgctggggatgcg 639
            ||||||||||||||||||||
Sbjct: 7205 cagcgcttgctggggatgcg 7224

>gb|AC011399.6| Homo sapiens chromosome 5 clone CTB-25P15, complete sequence
          Length = 174158

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tagtagcaccaactaatatg 52
             ||||||||||||||||||||
Sbjct: 21202 tagtagcaccaactaatatg 21221

>dbj|AK024213.1| Homo sapiens cDNA FLJ14151 fis, clone MAMMA1003031
          Length = 2406

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  tagtagcaccaactaatatg 52
           ||||||||||||||||||||
Sbjct: 420 tagtagcaccaactaatatg 401

>ref|XM_680301.1| PREDICTED: Danio rerio similar to NHL repeat containing 2
           (LOC557264), mRNA
          Length = 2166

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 470 tcaagcagcaccactttccc 489
           ||||||||||||||||||||
Sbjct: 236 tcaagcagcaccactttccc 217

>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete
              sequence
          Length = 250531

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    tagaaacaacactccttgca 422
              ||||||||||||||||||||
Sbjct: 234871 tagaaacaacactccttgca 234852

>emb|AL662923.21| Mouse DNA sequence from clone RP23-25A3 on chromosome X, complete
              sequence
          Length = 211977

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    tgaaactttcattttgcaga 273
              ||||||||||||||||||||
Sbjct: 115792 tgaaactttcattttgcaga 115811

>emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in linkage group 19,
             complete sequence
          Length = 190702

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   aactttcattttgcagaaaa 276
             ||||||||||||||||||||
Sbjct: 73416 aactttcattttgcagaaaa 73397

>emb|AL358913.4|CNS05TEE Human chromosome 14 DNA sequence BAC R-557C9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 179862

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   ttccattttgaaaatcaagc 475
             ||||||||||||||||||||
Sbjct: 61688 ttccattttgaaaatcaagc 61669

>dbj|AP000856.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1539E1
          Length = 152130

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 75   taataccacatcgaagcaaacatg 98
            ||||||||||| ||||||||||||
Sbjct: 3626 taataccacatggaagcaaacatg 3649

>gb|AC163408.4| Mus musculus chromosome 5, clone RP24-300F2, complete sequence
          Length = 171463

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    gaaactgaaactttcatttt 268
              ||||||||||||||||||||
Sbjct: 122303 gaaactgaaactttcatttt 122322

>gb|AC170917.2| Mus musculus BAC clone RP23-160F6 from chromosome 1, complete
            sequence
          Length = 195784

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  gttctccctctgggtaatca 401
            ||||||||||||||||||||
Sbjct: 7009 gttctccctctgggtaatca 7028

>dbj|AP004285.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1356H11
          Length = 145327

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    taataccacatcgaagcaaacatg 98
             ||||||||||| ||||||||||||
Sbjct: 62405 taataccacatggaagcaaacatg 62428


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,310,679
Number of Sequences: 3902068
Number of extensions: 6310679
Number of successful extensions: 119994
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119891
Number of HSP's gapped (non-prelim): 103
length of query: 700
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 677
effective length of database: 17,143,297,704
effective search space: 11606012545608
effective search space used: 11606012545608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)