ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32p07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
2dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
3dbj|AK071627.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
4dbj|AK067021.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
5dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
6gb|AY104871.1| Zea mays PCO094431 mRNA sequence 90 7e-15
7ref|NM_188693.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
9dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
10dbj|AK073776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
11gb|AY104721.1| Zea mays PCO105901 mRNA sequence 54 4e-04
12gb|BT016179.1| Zea mays clone Contig12 mRNA sequence 48 0.023
13gb|AY105519.1| Zea mays PCO124021 mRNA sequence 48 0.023
14gb|AY108146.1| Zea mays PCO079748 mRNA sequence 46 0.092
15gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.4
16ref|XM_607501.2| PREDICTED: Bos taurus similar to microtubule as... 42 1.4
17ref|XM_567282.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 1.4
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19dbj|AK121085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
20ref|XM_560403.1| Anopheles gambiae str. PEST ENSANGP00000019621 ... 42 1.4
21gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
22gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
23gb|AC154046.1| Drosophila melanogaster clone BACR29O22, complete... 40 5.7
24ref|XM_799230.1| Trypanosoma cruzi strain CL Brener MFS transpor... 40 5.7
25ref|XM_760211.1| Theileria parva strain Muguga ABC transporter (... 40 5.7
26emb|CR704453.2|CNS0G6I9 Tetraodon nigroviridis full-length cDNA 40 5.7
27emb|BX842568.3| Human DNA sequence from clone RP11-31H15 on chro... 40 5.7
28emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 5.7
29emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in... 40 5.7
30emb|AL591410.8| Mouse DNA sequence from clone RP23-96I2 on chrom... 40 5.7
31dbj|AB121977.1| Xanthobacter polyaromaticivorans dbd gene cluste... 40 5.7
32gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswel... 40 5.7
33tpg|BK002132.1| TPA: TPA_inf: Drosophila melanogaster HDC10043 (... 40 5.7
34gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 5.7
35dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.7
36gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48... 40 5.7
37emb|CT010481.8| M.truncatula DNA sequence from clone MTH2-62G7 o... 40 5.7
38gb|AF002254.1|AF002254 Oryza sativa MADS-domain protein gene, pa... 40 5.7
39emb|AL627244.1|HS160J21 Homo sapiens chromosome X sequence from ... 40 5.7 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Plus

                                                                          
Query: 301    cacctcgatccggccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgat 360
              |||||||||||||||||| ||||| || ||||||||||| ||  ||||||||||||| ||
Sbjct: 218947 cacctcgatccggccccatttgtcaactgccagcctcatggtccccttgaacatgtcaat 219006

                                                    
Query: 361    cctggcgttgcggaagatcaccgtgttgcctggcttca 398
              | |||| ||||||||||| |||||| ||||||||||||
Sbjct: 219007 cttggcattgcggaagatgaccgtggtgcctggcttca 219044



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 155    aaaatctatgtccacagccagagag 179
              ||||||||||||||||||| |||||
Sbjct: 218816 aaaatctatgtccacagcccgagag 218840
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>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0075G19
          Length = 163558

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Plus

                                                                         
Query: 301   cacctcgatccggccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgat 360
             |||||||||||||||||| ||||| || ||||||||||| ||  ||||||||||||| ||
Sbjct: 83843 cacctcgatccggccccatttgtcaactgccagcctcatggtccccttgaacatgtcaat 83902

                                                   
Query: 361   cctggcgttgcggaagatcaccgtgttgcctggcttca 398
             | |||| ||||||||||| |||||| ||||||||||||
Sbjct: 83903 cttggcattgcggaagatgaccgtggtgcctggcttca 83940



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 155   aaaatctatgtccacagccagagag 179
             ||||||||||||||||||| |||||
Sbjct: 83712 aaaatctatgtccacagcccgagag 83736
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>dbj|AK071627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107F06, full
           insert sequence
          Length = 1006

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                       
Query: 301 cacctcgatccggccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgat 360
           |||||||||||||||||| ||||| || ||||||||||| ||  ||||||||||||| ||
Sbjct: 519 cacctcgatccggccccatttgtcaactgccagcctcatggtccccttgaacatgtcaat 460

                                                 
Query: 361 cctggcgttgcggaagatcaccgtgttgcctggcttca 398
           | |||| ||||||||||| |||||| ||||||||||||
Sbjct: 459 cttggcattgcggaagatgaccgtggtgcctggcttca 422



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 155 aaaatctatgtccacagccagagag 179
           ||||||||||||||||||| |||||
Sbjct: 650 aaaatctatgtccacagcccgagag 626
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>dbj|AK067021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090L10, full
           insert sequence
          Length = 902

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                       
Query: 301 cacctcgatccggccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgat 360
           |||||||||||||||||| ||||| || ||||||||||| ||  ||||||||||||| ||
Sbjct: 484 cacctcgatccggccccatttgtcaactgccagcctcatggtccccttgaacatgtcaat 425

                                                 
Query: 361 cctggcgttgcggaagatcaccgtgttgcctggcttca 398
           | |||| ||||||||||| |||||| ||||||||||||
Sbjct: 424 cttggcattgcggaagatgaccgtggtgcctggcttca 387



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 155 aaaatctatgtccacagccagagag 179
           ||||||||||||||||||| |||||
Sbjct: 615 aaaatctatgtccacagcccgagag 591
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>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0681G01, complete sequence
          Length = 184118

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                        
Query: 301  cacctcgatccggccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgat 360
            |||||||||||||||||| ||||| || ||||||||||| ||  ||||||||||||| ||
Sbjct: 1595 cacctcgatccggccccatttgtcaactgccagcctcatggtccccttgaacatgtcaat 1536

                                                  
Query: 361  cctggcgttgcggaagatcaccgtgttgcctggcttca 398
            | |||| ||||||||||| |||||| ||||||||||||
Sbjct: 1535 cttggcattgcggaagatgaccgtggtgcctggcttca 1498



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 155  aaaatctatgtccacagccagagag 179
            ||||||||||||||||||| |||||
Sbjct: 1726 aaaatctatgtccacagcccgagag 1702
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>gb|AY104871.1| Zea mays PCO094431 mRNA sequence
          Length = 902

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                       
Query: 301 cacctcgatccggccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgat 360
           |||||| ||||||||||| |||||||||||||| ||||| ||| |||||||||| || ||
Sbjct: 529 cacctcaatccggccccaattgtccaccgccagtctcatggtgcccttgaacatatcaat 470

                                
Query: 361 cctggcgttgcggaagatcac 381
           | |||| ||||||||||||||
Sbjct: 469 cttggcattgcggaagatcac 449
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>ref|NM_188693.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 426

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 ccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgatcctggcgttgcgg 373
           ||||||||||||||||| |||||||| | | | ||||||||||||||  |||| ||||| 
Sbjct: 332 ccccacttgtccaccgcaagcctcattgagcctttgaacatgtcgattttggcattgcgc 273

                   
Query: 374 aagatcac 381
           | ||||||
Sbjct: 272 atgatcac 265
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                           
Query: 314     ccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgatcctggcgttgcgg 373
               ||||||||||||||||| |||||||| | | | ||||||||||||||  |||| ||||| 
Sbjct: 7671352 ccccacttgtccaccgcaagcctcattgagcctttgaacatgtcgattttggcattgcgc 7671293

                       
Query: 374     aagatcac 381
               | ||||||
Sbjct: 7671292 atgatcac 7671285
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>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0086P08
          Length = 145312

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 314   ccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgatcctggcgttgcgg 373
             ||||||||||||||||| |||||||| | | | ||||||||||||||  |||| ||||| 
Sbjct: 81928 ccccacttgtccaccgcaagcctcattgagcctttgaacatgtcgattttggcattgcgc 81869

                     
Query: 374   aagatcac 381
             | ||||||
Sbjct: 81868 atgatcac 81861
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>dbj|AK073776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D04, full
           insert sequence
          Length = 854

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 ccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgatcctggcgttgcgg 373
           ||||||||||||||||| |||||||| | | | ||||||||||||||  |||| ||||| 
Sbjct: 471 ccccacttgtccaccgcaagcctcattgagcctttgaacatgtcgattttggcattgcgc 412

                   
Query: 374 aagatcac 381
           | ||||||
Sbjct: 411 atgatcac 404
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>gb|AY104721.1| Zea mays PCO105901 mRNA sequence
          Length = 1144

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                       
Query: 303 cctcgatccggccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgatcc 362
           |||| ||||| ||||| |||||||| || |||||||| |   | ||||||||||||||  
Sbjct: 319 cctcaatccgcccccatttgtccactgcaagcctcattgatcctttgaacatgtcgattt 260

                                                                      
Query: 363 tggcgttgcggaagatcaccgtgttgcctggcttcagcatctcaatctggtcgttgcgg 421
           |||| ||||| ||||||||||||    | ||||||||||  ||||  ||||||||||||
Sbjct: 259 tggcattgcgcaagatcaccgtggcctcgggcttcagcaaatcaacttggtcgttgcgg 201
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>gb|BT016179.1| Zea mays clone Contig12 mRNA sequence
          Length = 965

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 314 ccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgatc 361
           |||||||||||||| || |||| |||||   |||||||||||||||||
Sbjct: 516 ccccacttgtccactgcaagccgcatcgaacccttgaacatgtcgatc 469
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>gb|AY105519.1| Zea mays PCO124021 mRNA sequence
          Length = 802

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 314 ccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgatc 361
           |||||||||||||| || |||| |||||   |||||||||||||||||
Sbjct: 482 ccccacttgtccactgcaagccgcatcgaacccttgaacatgtcgatc 435
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>gb|AY108146.1| Zea mays PCO079748 mRNA sequence
          Length = 836

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 303 cctcgatccggccccacttgtccaccgccagcctcatcgtgtccttgaacatgtcgatcc 362
           |||| ||||| |||||||||||||| || |||||||| |   | ||||||||||| ||  
Sbjct: 402 cctcaatccgcccccacttgtccactgcaagcctcattgatcctttgaacatgtctattt 343

                              
Query: 363 tggcgttgcggaagatcac 381
           |||| ||||| ||||||||
Sbjct: 342 tggcattgcgcaagatcac 324
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>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete
             sequence
          Length = 1085720

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 213   gcttcttcggcggcacgttcacgag 237
             ||||||||||| |||||||||||||
Sbjct: 60860 gcttcttcggcagcacgttcacgag 60884
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>ref|XM_607501.2| PREDICTED: Bos taurus similar to microtubule associated
            serine/threonine kinase 1 (LOC529061), partial mRNA
          Length = 6123

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 271  gttcaccttgaagccggcagg 291
            |||||||||||||||||||||
Sbjct: 1959 gttcaccttgaagccggcagg 1939
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>ref|XM_567282.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNJ00250) partial mRNA
          Length = 3181

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 213  gcttcttcggcggcacgttcacgag 237
            ||||||||||| |||||||||||||
Sbjct: 2438 gcttcttcggcagcacgttcacgag 2414
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
             complete sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 314   ccccacttgtccaccgccagcctcatcgtgtccttgaacat 354
             ||||||||||||||||| |||| |||||   ||||||||||
Sbjct: 40142 ccccacttgtccaccgcaagccgcatcgaccccttgaacat 40182
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>dbj|AK121085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064B05, full
           insert sequence
          Length = 756

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 314 ccccacttgtccaccgccagcctcatcgtgtccttgaacat 354
           ||||||||||||||||| |||| |||||   ||||||||||
Sbjct: 432 ccccacttgtccaccgcaagccgcatcgaccccttgaacat 392
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>ref|XM_560403.1| Anopheles gambiae str. PEST ENSANGP00000019621
           (ENSANGG00000017132), partial mRNA
          Length = 1287

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 239 tcgtactcgaccttcgacacgttgt 263
           |||||||| ||||||||||||||||
Sbjct: 380 tcgtactccaccttcgacacgttgt 356
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
             complete sequence
          Length = 156772

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 314   ccccacttgtccaccgccagcctcatcgtgtccttgaacat 354
             ||||||||||||||||| |||| |||||   ||||||||||
Sbjct: 40142 ccccacttgtccaccgcaagccgcatcgaccccttgaacat 40182
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>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0098I11, complete sequence
          Length = 122970

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 314   ccccacttgtccaccgccagcctcatcgtgtccttgaacat 354
             ||||||||||||||||| |||| |||||   ||||||||||
Sbjct: 49371 ccccacttgtccaccgcaagccgcatcgaccccttgaacat 49411
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>gb|AC154046.1| Drosophila melanogaster clone BACR29O22, complete sequence
          Length = 177480

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    atgtccacagccagagagag 181
              ||||||||||||||||||||
Sbjct: 146403 atgtccacagccagagagag 146384
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>ref|XM_799230.1| Trypanosoma cruzi strain CL Brener MFS transporter
           (Tc00.1047053503505.20) partial mRNA
          Length = 1112

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 202 tttacgctcctgcttcttcggcggcacg 229
           ||||||||||||||||| ||||| ||||
Sbjct: 71  tttacgctcctgcttctccggcgtcacg 44
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>ref|XM_760211.1| Theileria parva strain Muguga ABC transporter (TP02_0737) partial
            mRNA
          Length = 1905

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   cgacacagaacacgatccat 43
            ||||||||||||||||||||
Sbjct: 1119 cgacacagaacacgatccat 1138
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>emb|CR704453.2|CNS0G6I9 Tetraodon nigroviridis full-length cDNA
          Length = 592

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 ccaccgccagcctcatcgtg 343
           ||||||||||||||||||||
Sbjct: 24  ccaccgccagcctcatcgtg 5
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>emb|BX842568.3| Human DNA sequence from clone RP11-31H15 on chromosome X Contains the
             gene for a novel protein, a transmembrane 4 superfamily
             member 10 (TM4SF10) pseudogene, a transcription factor
             Dp-1 (TFDP1) pseudogene, a novel pseudogene and two
             ferritin, heavy polypeptide-like 17 (FTHL17) pseudogenes,
             complete sequence
          Length = 161540

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 81    agcctttttcactactactaacag 104
             |||||||||| |||||||||||||
Sbjct: 99071 agcctttttcgctactactaacag 99094
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   tgtcctcgttcaccttgaagccgg 287
             ||||||||| ||||||||||||||
Sbjct: 39638 tgtcctcgtgcaccttgaagccgg 39615
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>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17,
              complete sequence
          Length = 193986

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    gcaggctcctccaccacctc 306
              ||||||||||||||||||||
Sbjct: 134051 gcaggctcctccaccacctc 134032
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>emb|AL591410.8| Mouse DNA sequence from clone RP23-96I2 on chromosome 11 Contains part of
              the Myo1d gene for myosin ID, complete sequence
          Length = 231675

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    ctgctacccactgcctccca 155
              ||||||||||||||||||||
Sbjct: 181107 ctgctacccactgcctccca 181126
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>dbj|AB121977.1| Xanthobacter polyaromaticivorans dbd gene cluster (dbdA, dbdB, dbdCa,
            dbdCb, dbdCc, dbdD, dbdE), complete and partial cds
          Length = 6407

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  cggaagatcaccgtgttgcc 390
            ||||||||||||||||||||
Sbjct: 5750 cggaagatcaccgtgttgcc 5731
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>gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 167638

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   atgtccacagccagagagag 181
             ||||||||||||||||||||
Sbjct: 85353 atgtccacagccagagagag 85372
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>tpg|BK002132.1| TPA: TPA_inf: Drosophila melanogaster HDC10043 (HDC10043) gene,
           complete cds
          Length = 2327

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 atgtccacagccagagagag 181
           ||||||||||||||||||||
Sbjct: 504 atgtccacagccagagagag 523
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    gcttcttcggcggcacgttc 232
              ||||||||||||||||||||
Sbjct: 500970 gcttcttcggcggcacgttc 500989
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 235     gagttcgtactcgaccttcg 254
               ||||||||||||||||||||
Sbjct: 2451606 gagttcgtactcgaccttcg 2451625



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 285    cggcaggctcctccaccacctcga 308
              ||||||||||||||||| ||||||
Sbjct: 702204 cggcaggctcctccacctcctcga 702181
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>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete
              sequence
          Length = 282116

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    atgtccacagccagagagag 181
              ||||||||||||||||||||
Sbjct: 281065 atgtccacagccagagagag 281084
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>emb|CT010481.8| M.truncatula DNA sequence from clone MTH2-62G7 on chromosome 3,
            complete sequence
          Length = 113400

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   gaagcctttttcactactac 98
            ||||||||||||||||||||
Sbjct: 1558 gaagcctttttcactactac 1577
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>gb|AF002254.1|AF002254 Oryza sativa MADS-domain protein gene, partial cds
          Length = 2246

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  gctcctgcttcttcggcggc 226
            ||||||||||||||||||||
Sbjct: 1725 gctcctgcttcttcggcggc 1744
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>emb|AL627244.1|HS160J21 Homo sapiens chromosome X sequence from BAC CEPHB160J21 , map Xp21.1
             region DXS709-SRPX, complete sequence
          Length = 150966

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 81    agcctttttcactactactaacag 104
             |||||||||| |||||||||||||
Sbjct: 83639 agcctttttcgctactactaacag 83662


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,755,781
Number of Sequences: 3902068
Number of extensions: 3755781
Number of successful extensions: 59710
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59502
Number of HSP's gapped (non-prelim): 207
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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