>YCBX_ECOLI (P75863) Hypothetical protein ycbX|
          Length = 369

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = -2

Query: 487 VPINRFRPNILVDGCHPYAEDLWKTIKIDKLTFDGVKLCDRCKVPTVNQENGIL--GTEP 314
           V + +FRPN++V G   + ED WK I+I  + FD VK C RC   TV+ E G      EP
Sbjct: 166 VKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEP 225

Query: 313 TETMLTFRSGEVLRPSHKNKQKVYFGQNLVCKESVSAKGKGRIVKVGDPVYVLQTYPS 140
            +T+ +FR+ +       +   V FGQNL+ + S        +++VGD V +L T P+
Sbjct: 226 LKTLQSFRTAQ-------DNGDVDFGQNLIARNS-------GVIRVGDEVEILATAPA 269

>RS4E_METVA (P14023) 30S ribosomal protein S4e|
          Length = 244

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
 Frame = -2

Query: 445 CHPYAEDLWKTIKIDKLTFDGVK---------LCDRCKVPTVNQ-------ENGILGTEP 314
           C   A +  K I++ K+  DGVK         L D   +P +N+       ENG +  + 
Sbjct: 55  CADNAREAKKIIQMGKILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRISLKK 114

Query: 313 TET----MLTFRSGEVLRPSHKNKQKVYFGQNLVCKESVSAKGKGRIVKVGDPVYV 158
           TE     +    +  V++  H  +  ++ G+N + K + + K +  I K GD V V
Sbjct: 115 TEKTGVKLCKIVNKTVIKGGHI-QLNLHDGRNQIVKVANALKAEEDIYKTGDSVLV 169

>TSA4_GIALA (P21849) Major surface-labeled trophozoite antigen 417 precursor|
          Length = 713

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/68 (26%), Positives = 24/68 (35%)
 Frame = -2

Query: 397 LTFDGVKLCDRCKVPTVNQENGILGTEPTETMLTFRSGEVLRPSHKNKQKVYFGQNLVCK 218
           LT DG   C  C   T   +NG+   + +    T     +           YF  N  C 
Sbjct: 478 LTIDGASYCSECATTTEYPQNGVCAPKASRATPTCNDSPIQNGVCGTCADNYFKMNGGCY 537

Query: 217 ESVSAKGK 194
           E+V   GK
Sbjct: 538 ETVKYPGK 545

>NUOF_BUCAP (Q8K9Y3) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain F) (NDH-1, chain F)
          Length = 447

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -3

Query: 177 SATRFTFFRHTLLPMKFQPERGLGSTYCICVYVCVEEMTGSVDFVCTLRKF 25
           + T F   +H  LPM F      GS     + + V+  T  +  VC + KF
Sbjct: 296 AGTDFLIEKHLDLPMDFTSIAKAGSRLGTAIAMAVDNKTNMISLVCNIEKF 346

>TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor|
          Length = 667

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/68 (25%), Positives = 25/68 (36%)
 Frame = -2

Query: 397 LTFDGVKLCDRCKVPTVNQENGILGTEPTETMLTFRSGEVLRPSHKNKQKVYFGQNLVCK 218
           LT DG   C  C       +NGI  +    T+ T ++  V      +    +   N  C 
Sbjct: 426 LTIDGASYCSECDTQNEYPQNGICTSTTARTVATCKNSNVANGICSSCTNGFLRMNGGCY 485

Query: 217 ESVSAKGK 194
           E+    GK
Sbjct: 486 ETTKFPGK 493

>COGT1_ARATH (Q9ZQ99) Cytokinin-O-glucosyltransferase 1 (EC 2.4.1.-) (Zeatin|
           O-glucosyltransferase 1) (AtZOG1)
          Length = 491

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -2

Query: 505 ELLKEPVPINRFRPN-ILVDGCHPYAEDLWKTIKIDKLTFDGV 380
           +LLKE  P    RPN I+ D C PY   + K + I K+ F G+
Sbjct: 111 KLLKEIQP----RPNCIIADMCLPYTNRIAKNLGIPKIIFHGM 149

>PYRF_RHIME (Q92SN8) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 234

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = -2

Query: 358 VPTVNQENGILGTEPTETM-------LTFRSG-EVLRPSHKNKQKVYFGQNLVCKESVSA 203
           +PTV +   I+ T   E +       L F  G +  R    + ++V+    L+  ++  A
Sbjct: 15  LPTVTEAEKIVSTLGEEVLFYKIGYQLAFAGGLDFARDLAASGKQVFLDMKLLDIDNTVA 74

Query: 202 KGKGRIVKVGDPVYVLQTYPSS 137
           KG   IVK+G  +  L  YP +
Sbjct: 75  KGVENIVKMGVSMLTLHAYPKA 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,177,186
Number of Sequences: 219361
Number of extensions: 1774076
Number of successful extensions: 4331
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4331
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)