ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32p05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1tpg|BK000086.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-gr... 170 3e-39
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
3dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
4dbj|AK110759.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
5ref|NM_191385.1| Oryza sativa (japonica cultivar-group), predic... 168 1e-38
6gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 111 3e-21
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
8gb|AF435642.1| Oryza sativa CSLC7 mRNA, partial cds 111 3e-21
9ref|XM_475689.1| Oryza sativa (japonica cultivar-group), predic... 109 1e-20
10gb|BT018527.1| Zea mays clone EL01N0432H05.d mRNA sequence 84 6e-13
11gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genom... 78 4e-11
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 4e-11
13gb|AF435653.1|AF435652S2 Oryza sativa CSLC9 gene, exon 5 and com... 78 4e-11
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
15gb|AF435641.1| Oryza sativa CSLC9 mRNA, complete cds 78 4e-11
16dbj|AK121805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
17ref|XM_481033.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
18tpg|BK000088.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-gr... 66 1e-07
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
20dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
21dbj|AP004013.2| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
22dbj|AK108045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
23gb|AY112276.1| Zea mays CL8951_1 mRNA sequence 64 6e-07
24gb|AC166487.6| Mus musculus chromosome 1, clone RP23-298A7, comp... 44 0.52
25gb|AC131748.3| Mus musculus BAC clone RP23-42A17 from 12, comple... 44 0.52
26emb|AL589675.5| Human DNA sequence from clone RP11-255J3 on chro... 44 0.52
27gb|AC152059.4| Mus musculus BAC clone RP24-283B23 from chromosom... 44 0.52
28emb|AL583892.13| Mouse DNA sequence from clone RP23-32G7 on chro... 44 0.52
29emb|AL390056.7| Human DNA sequence from clone RP3-493I16 on chro... 42 2.1
30emb|AL671392.5| Human DNA sequence from clone XXbac-92L3 on chro... 42 2.1
31ref|NM_124465.4| Arabidopsis thaliana ubiquitin conjugating enzy... 40 8.2
32gb|BC045926.1| Danio rerio zgc:56121, mRNA (cDNA clone MGC:56121... 40 8.2
33ref|NM_198980.1| Danio rerio zgc:56121 (zgc:56121), mRNA 40 8.2
34gb|AC139209.10| Mus musculus chromosome 15, clone RP23-153G2, co... 40 8.2
35emb|CR694001.2|CNS0FYFX Tetraodon nigroviridis full-length cDNA 40 8.2
36emb|CR691423.2|CNS0FWGB Tetraodon nigroviridis full-length cDNA 40 8.2
37emb|CR690576.1|CNS0FVSS Tetraodon nigroviridis full-length cDNA 40 8.2
38emb|CR688834.2|CNS0FUGE Tetraodon nigroviridis full-length cDNA 40 8.2
39ref|XM_849956.1| PREDICTED: Canis familiaris similar to low dens... 40 8.2
40emb|AL606462.5| Human DNA sequence from clone CTD-2090I13 on chr... 40 8.2
41emb|AL512323.8| Human DNA sequence from clone RP13-445B20 on chr... 40 8.2
42emb|AL450322.17| Human DNA sequence from clone RP11-184A2 on chr... 40 8.2
43emb|AL356213.10| Human DNA sequence from clone RP5-1171F9 on chr... 40 8.2
44gb|AC102705.10| Mus musculus, clone RP24-400C16, complete sequence 40 8.2
45ref|XM_777831.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.2
46gb|AY065303.1| Arabidopsis thaliana putative ubiquitin-conjugati... 40 8.2
47gb|AE008836.1| Salmonella typhimurium LT2, section 140 of 220 of... 40 8.2
48emb|AL627277.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 8.2
49emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC... 40 8.2
50gb|AC161575.3| Mus musculus chromosome 15, clone RP24-264K6, com... 40 8.2
51gb|AC010139.4|AC010139 Homo sapiens BAC clone RP11-194G10 from 3... 40 8.2
52emb|BX834060.1|CNS09YYK Arabidopsis thaliana Full-length cDNA Co... 40 8.2
53gb|AC092704.10| Homo sapiens chromosome 18, clone RP11-687D19, c... 40 8.2
54gb|AC108448.12| Homo sapiens chromosome 11, clone CTD-2544D21, c... 40 8.2
55gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 8.2
56dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
57dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.2
58emb|BX248326.14| Zebrafish DNA sequence from clone DKEY-260N20 i... 40 8.2
59emb|CR954168.11| Zebrafish DNA sequence from clone DKEY-264P5 in... 40 8.2
60gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 8.2
61gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 8.2
62gb|AC105072.9| Mus musculus chromosome 5, clone RP24-167C6, comp... 40 8.2
63gb|AC134463.3| Mus musculus BAC clone RP23-425N12 from 5, comple... 40 8.2
64emb|AL844486.12| Mouse DNA sequence from clone RP23-249P4 on chr... 40 8.2
65gb|AC100244.12| Mus musculus chromosome 8, clone RP23-64K12, com... 40 8.2
66emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chr... 40 8.2 
>tpg|BK000086.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose
            synthase-like C1 gene, complete cds
          Length = 7383

 Score =  170 bits (86), Expect = 3e-39
 Identities = 155/178 (87%)
 Strand = Plus / Minus

                                                                        
Query: 318  atcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctgga 377
            |||||||||| ||||||||||| | |||||| ||||| |||| ||| || ||||| ||||
Sbjct: 4714 atcactcgacttgctcgccgatcaagtcgaggccgacaaccaagaatgagaccccttgga 4655

                                                                        
Query: 378  acagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtca 437
            ||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 4654 acagaaggaagtagaaatgtatgccttgcaccgagagcaggcttcgagctgctgctgtta 4595

                                                                      
Query: 438  agaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttcttttt 495
            | || |||||||||||||| || || |||  ||||| |||||||||||| ||||||||
Sbjct: 4594 atagaaggaaggagagtgccagctccttctggtatatcctattgtgttttttcttttt 4537



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 51   ctccatttgaaggtaaactgtcaa 74
            ||||||||||||||||||||||||
Sbjct: 5006 ctccatttgaaggtaaactgtcaa 4983



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 152  aagccatatatctacaaccccaaca 176
            |||||||||||||||| ||||||||
Sbjct: 4896 aagccatatatctacacccccaaca 4872
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  170 bits (86), Expect = 3e-39
 Identities = 155/178 (87%)
 Strand = Plus / Plus

                                                                            
Query: 318      atcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctgga 377
                |||||||||| ||||||||||| | |||||| ||||| |||| ||| || ||||| ||||
Sbjct: 32312263 atcactcgacttgctcgccgatcaagtcgaggccgacaaccaagaatgagaccccttgga 32312322

                                                                            
Query: 378      acagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtca 437
                ||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 32312323 acagaaggaagtagaaatgtatgccttgcaccgagagcaggcttcgagctgctgctgtta 32312382

                                                                          
Query: 438      agaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttcttttt 495
                | || |||||||||||||| || || |||  ||||| |||||||||||| ||||||||
Sbjct: 32312383 atagaaggaaggagagtgccagctccttctggtatatcctattgtgttttttcttttt 32312440



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 51       ctccatttgaaggtaaactgtcaa 74
                ||||||||||||||||||||||||
Sbjct: 32311971 ctccatttgaaggtaaactgtcaa 32311994



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 152      aagccatatatctacaaccccaaca 176
                |||||||||||||||| ||||||||
Sbjct: 32312081 aagccatatatctacacccccaaca 32312105



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 180      tcatttcagcctctctgatgatca 203
                |||||||| |||||||||||||||
Sbjct: 24442658 tcatttcatcctctctgatgatca 24442635
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>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0053G03
          Length = 101901

 Score =  170 bits (86), Expect = 3e-39
 Identities = 155/178 (87%)
 Strand = Plus / Plus

                                                                         
Query: 318   atcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctgga 377
             |||||||||| ||||||||||| | |||||| ||||| |||| ||| || ||||| ||||
Sbjct: 44548 atcactcgacttgctcgccgatcaagtcgaggccgacaaccaagaatgagaccccttgga 44607

                                                                         
Query: 378   acagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtca 437
             ||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 44608 acagaaggaagtagaaatgtatgccttgcaccgagagcaggcttcgagctgctgctgtta 44667

                                                                       
Query: 438   agaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttcttttt 495
             | || |||||||||||||| || || |||  ||||| |||||||||||| ||||||||
Sbjct: 44668 atagaaggaaggagagtgccagctccttctggtatatcctattgtgttttttcttttt 44725



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 51    ctccatttgaaggtaaactgtcaa 74
             ||||||||||||||||||||||||
Sbjct: 44256 ctccatttgaaggtaaactgtcaa 44279



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 152   aagccatatatctacaaccccaaca 176
             |||||||||||||||| ||||||||
Sbjct: 44366 aagccatatatctacacccccaaca 44390
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>dbj|AK110759.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-H04, full
           insert sequence
          Length = 912

 Score =  170 bits (86), Expect = 3e-39
 Identities = 155/178 (87%)
 Strand = Plus / Minus

                                                                       
Query: 318 atcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctgga 377
           |||||||||| ||||||||||| | |||||| ||||| |||| ||| || ||||| ||||
Sbjct: 523 atcactcgacttgctcgccgatcaagtcgaggccgacaaccaagaatgagaccccttgga 464

                                                                       
Query: 378 acagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtca 437
           ||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 463 acagaaggaagtagaaatgtatgccttgcaccgagagcaggcttcgagctgctgctgtta 404

                                                                     
Query: 438 agaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttcttttt 495
           | || |||||||||||||| || || |||  ||||| |||||||||||| ||||||||
Sbjct: 403 atagaaggaaggagagtgccagctccttctggtatatcctattgtgttttttcttttt 346



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 51  ctccatttgaaggtaaactgtcaa 74
           ||||||||||||||||||||||||
Sbjct: 815 ctccatttgaaggtaaactgtcaa 792



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 152 aagccatatatctacaaccccaaca 176
           |||||||||||||||| ||||||||
Sbjct: 705 aagccatatatctacacccccaaca 681
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>ref|NM_191385.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2073

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 319  tcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaa 378
            ||||||||| ||||||||||| | |||||| ||||| |||| ||| || ||||| |||||
Sbjct: 2073 tcactcgacttgctcgccgatcaagtcgaggccgacaaccaagaatgagaccccttggaa 2014

                                                                        
Query: 379  cagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtcaa 438
            |||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||
Sbjct: 2013 cagaaggaagtagaaatgtatgccttgcaccgagagcaggcttcgagctgctgctgttaa 1954

                                                                     
Query: 439  gaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttcttttt 495
             || |||||||||||||| || || |||  ||||| |||||||||||| ||||||||
Sbjct: 1953 tagaaggaaggagagtgccagctccttctggtatatcctattgtgttttttcttttt 1897
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>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
             complete sequence
          Length = 162772

 Score =  111 bits (56), Expect = 3e-21
 Identities = 149/180 (82%)
 Strand = Plus / Plus

                                                                         
Query: 318   atcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctgga 377
             ||||||| || ||||| || || |||||||| || || |||| ||| || ||||| ||||
Sbjct: 43505 atcactccacttgctcaccaattaggtcgagaccaacaaccaagaatgagaccccttgga 43564

                                                                         
Query: 378   acagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtca 437
             ||||||| ||||||||||| || |||||| | || ||||  |||||||||||||| || |
Sbjct: 43565 acagaagaaagtagaaatggattccctgagcagatagcaaactgcgagctgctgccgtta 43624

                                                                         
Query: 438   agaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttctttttgg 497
             | | ||||||||| ||||| ||||| |||||||| | ||||||||| |||||||| ||||
Sbjct: 43625 acaagaggaaggaaagtgccagttccttcctgtagatcctattgtgcttcttcttcttgg 43684
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  111 bits (56), Expect = 3e-21
 Identities = 149/180 (82%)
 Strand = Plus / Plus

                                                                            
Query: 318      atcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctgga 377
                ||||||| || ||||| || || |||||||| || || |||| ||| || ||||| ||||
Sbjct: 25100850 atcactccacttgctcaccaattaggtcgagaccaacaaccaagaatgagaccccttgga 25100909

                                                                            
Query: 378      acagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtca 437
                ||||||| ||||||||||| || |||||| | || ||||  |||||||||||||| || |
Sbjct: 25100910 acagaagaaagtagaaatggattccctgagcagatagcaaactgcgagctgctgccgtta 25100969

                                                                            
Query: 438      agaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttctttttgg 497
                | | ||||||||| ||||| ||||| |||||||| | ||||||||| |||||||| ||||
Sbjct: 25100970 acaagaggaaggaaagtgccagttccttcctgtagatcctattgtgcttcttcttcttgg 25101029
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>gb|AF435642.1| Oryza sativa CSLC7 mRNA, partial cds
          Length = 1113

 Score =  111 bits (56), Expect = 3e-21
 Identities = 149/180 (82%)
 Strand = Plus / Minus

                                                                       
Query: 318 atcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctgga 377
           ||||||| || ||||| || || |||||||| || || |||| ||| || ||||| ||||
Sbjct: 762 atcactccacttgctcaccaattaggtcgagaccaacaaccaagaatgagaccccttgga 703

                                                                       
Query: 378 acagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtca 437
           ||||||| ||||||||||| || |||||| | || ||||  |||||||||||||| || |
Sbjct: 702 acagaagaaagtagaaatggattccctgagcagatagcaaactgcgagctgctgccgtta 643

                                                                       
Query: 438 agaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttctttttgg 497
           | | ||||||||| ||||| ||||| |||||||| | ||||||||| |||||||| ||||
Sbjct: 642 acaagaggaaggaaagtgccagttccttcctgtagatcctattgtgcttcttcttcttgg 583
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>ref|XM_475689.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2067

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Minus

                                                                        
Query: 319  tcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaa 378
            |||||| || ||||| || || |||||||| || || |||| ||| || ||||| |||||
Sbjct: 2067 tcactccacttgctcaccaattaggtcgagaccaacaaccaagaatgagaccccttggaa 2008

                                                                        
Query: 379  cagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgctgctgtcaa 438
            |||||| ||||||||||| || |||||| | || ||||  |||||||||||||| || ||
Sbjct: 2007 cagaagaaagtagaaatggattccctgagcagatagcaaactgcgagctgctgccgttaa 1948

                                                                       
Query: 439  gaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttctttttgg 497
             | ||||||||| ||||| ||||| |||||||| | ||||||||| |||||||| ||||
Sbjct: 1947 caagaggaaggaaagtgccagttccttcctgtagatcctattgtgcttcttcttcttgg 1889
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>gb|BT018527.1| Zea mays clone EL01N0432H05.d mRNA sequence
          Length = 2043

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 319  tcactcgacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaa 378
            |||||||||||||||||| |||||||| || || || | || ||| || || ||||||||
Sbjct: 1826 tcactcgacctgctcgcctatgaggtcaaggcctactagcaagaaggagacgccctggaa 1767

                                                      
Query: 379  cagaaggaagtagaaatgtatgccctgaaccgacagcaggct 420
            ||| ||||||||||| |||||||||||   ||||||||||||
Sbjct: 1766 caggaggaagtagaagtgtatgccctgcttcgacagcaggct 1725
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>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete
             sequence
          Length = 150743

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                         
Query: 371   ccctggaacagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgct 430
             ||||||||||| ||||||||||||||||| |||||   ||| ||||  ||||||||||| 
Sbjct: 53440 ccctggaacaggaggaagtagaaatgtataccctgtttcgagagcaaactgcgagctgca 53381

                                                                         
Query: 431   gctgtcaagaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttc 490
             || || | |||||| || |||||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 53380 gcggttaggaggagcaatgagagtgcaagctctttcttgtatatccggttgtgcttcttc 53321

                
Query: 491   ttt 493
             |||
Sbjct: 53320 ttt 53318
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 102/123 (82%)
 Strand = Plus / Plus

                                                                            
Query: 371      ccctggaacagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgct 430
                ||||||||||| ||||||||||||||||| |||||   ||| ||||  ||||||||||| 
Sbjct: 31627227 ccctggaacaggaggaagtagaaatgtataccctgtttcgagagcaaactgcgagctgca 31627286

                                                                            
Query: 431      gctgtcaagaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttc 490
                || || | |||||| || |||||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 31627287 gcggttaggaggagcaatgagagtgcaagctctttcttgtatatccggttgtgcttcttc 31627346

                   
Query: 491      ttt 493
                |||
Sbjct: 31627347 ttt 31627349
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>gb|AF435653.1|AF435652S2 Oryza sativa CSLC9 gene, exon 5 and complete cds
          Length = 1572

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                        
Query: 371  ccctggaacagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgct 430
            ||||||||||| ||||||||||||||||| |||||   ||| ||||  ||||||||||| 
Sbjct: 1026 ccctggaacaggaggaagtagaaatgtataccctgtttcgagagcaaactgcgagctgca 967

                                                                        
Query: 431  gctgtcaagaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttc 490
            || || | |||||| || |||||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 966  gcggttaggaggagcaatgagagtgcaagctctttcttgtatatccggttgtgcttcttc 907

               
Query: 491  ttt 493
            |||
Sbjct: 906  ttt 904
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 102/123 (82%)
 Strand = Plus / Plus

                                                                            
Query: 371      ccctggaacagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgct 430
                ||||||||||| ||||||||||||||||| |||||   ||| ||||  ||||||||||| 
Sbjct: 31717743 ccctggaacaggaggaagtagaaatgtataccctgtttcgagagcaaactgcgagctgca 31717802

                                                                            
Query: 431      gctgtcaagaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttc 490
                || || | |||||| || |||||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 31717803 gcggttaggaggagcaatgagagtgcaagctctttcttgtatatccggttgtgcttcttc 31717862

                   
Query: 491      ttt 493
                |||
Sbjct: 31717863 ttt 31717865
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>gb|AF435641.1| Oryza sativa CSLC9 mRNA, complete cds
          Length = 2045

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                        
Query: 371  ccctggaacagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgct 430
            ||||||||||| ||||||||||||||||| |||||   ||| ||||  ||||||||||| 
Sbjct: 1878 ccctggaacaggaggaagtagaaatgtataccctgtttcgagagcaaactgcgagctgca 1819

                                                                        
Query: 431  gctgtcaagaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttc 490
            || || | |||||| || |||||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 1818 gcggttaggaggagcaatgagagtgcaagctctttcttgtatatccggttgtgcttcttc 1759

               
Query: 491  ttt 493
            |||
Sbjct: 1758 ttt 1756
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>dbj|AK121805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097L05, full
            insert sequence
          Length = 2260

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                        
Query: 371  ccctggaacagaaggaagtagaaatgtatgccctgaaccgacagcaggctgcgagctgct 430
            ||||||||||| ||||||||||||||||| |||||   ||| ||||  ||||||||||| 
Sbjct: 1945 ccctggaacaggaggaagtagaaatgtataccctgtttcgagagcaaactgcgagctgca 1886

                                                                        
Query: 431  gctgtcaagaggaggaaggagagtgctagttctttcctgtataacctattgtgtttcttc 490
            || || | |||||| || |||||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 1885 gcggttaggaggagcaatgagagtgcaagctctttcttgtatatccggttgtgcttcttc 1826

               
Query: 491  ttt 493
            |||
Sbjct: 1825 ttt 1823
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>ref|XM_481033.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2238

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 325  gacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaacagaag 384
            |||||||||||||||||||||||| |||||| | ||||| |  || |||||||| || ||
Sbjct: 2232 gacctgctcgccgatgaggtcgaggccgacggcgaggaaggtgacgccctggaagaggag 2173

                     
Query: 385  gaagtagaa 393
            |||||||||
Sbjct: 2172 gaagtagaa 2164
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>tpg|BK000088.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose
            synthase-like C3 gene, complete cds
          Length = 4915

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 325  gacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaacagaag 384
            |||||||||||||||||||||||| |||||| | ||||| |  || |||||||| || ||
Sbjct: 4412 gacctgctcgccgatgaggtcgaggccgacggcgaggaaggtgacgccctggaagaggag 4353

                     
Query: 385  gaagtagaa 393
            |||||||||
Sbjct: 4352 gaagtagaa 4344
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                           
Query: 325     gacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaacagaag 384
               |||||||||||||||||||||||| |||||| | ||||| |  || |||||||| || ||
Sbjct: 9380975 gacctgctcgccgatgaggtcgaggccgacggcgaggaaggtgacgccctggaagaggag 9380916

                        
Query: 385     gaagtagaa 393
               |||||||||
Sbjct: 9380915 gaagtagaa 9380907
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>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1112_D12
          Length = 97572

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 325  gacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaacagaag 384
            |||||||||||||||||||||||| |||||| | ||||| |  || |||||||| || ||
Sbjct: 5566 gacctgctcgccgatgaggtcgaggccgacggcgaggaaggtgacgccctggaagaggag 5507

                     
Query: 385  gaagtagaa 393
            |||||||||
Sbjct: 5506 gaagtagaa 5498
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>dbj|AP004013.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1575_B01
          Length = 86158

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                         
Query: 325   gacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaacagaag 384
             |||||||||||||||||||||||| |||||| | ||||| |  || |||||||| || ||
Sbjct: 57204 gacctgctcgccgatgaggtcgaggccgacggcgaggaaggtgacgccctggaagaggag 57145

                      
Query: 385   gaagtagaa 393
             |||||||||
Sbjct: 57144 gaagtagaa 57136
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>dbj|AK108045.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E05, full
            insert sequence
          Length = 1795

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 325  gacctgctcgccgatgaggtcgagcccgacgaccaggaacgacaccccctggaacagaag 384
            |||||||||||||||||||||||| |||||| | ||||| |  || |||||||| || ||
Sbjct: 1444 gacctgctcgccgatgaggtcgaggccgacggcgaggaaggtgacgccctggaagaggag 1385

                     
Query: 385  gaagtagaa 393
            |||||||||
Sbjct: 1384 gaagtagaa 1376
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>gb|AY112276.1| Zea mays CL8951_1 mRNA sequence
          Length = 868

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 359 aggaacgacaccccctggaacagaaggaagtagaaatgtatgccctga 406
           ||||| |||| ||||||||||||||||||||||||||| || ||||||
Sbjct: 444 aggaatgacatcccctggaacagaaggaagtagaaatgaatcccctga 491
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>gb|AC166487.6| Mus musculus chromosome 1, clone RP23-298A7, complete sequence
          Length = 187404

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 177   ttttcatttcagcctctctgat 198
             ||||||||||||||||||||||
Sbjct: 81615 ttttcatttcagcctctctgat 81594
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>gb|AC131748.3| Mus musculus BAC clone RP23-42A17 from 12, complete sequence
          Length = 215972

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 439   gaggaggaaggagagtgctagttctt 464
             ||||||||||||| ||||||||||||
Sbjct: 55081 gaggaggaaggagggtgctagttctt 55106
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>emb|AL589675.5| Human DNA sequence from clone RP11-255J3 on chromosome 9 Contains the
             5' end of gene KIAA0020, a G protein pathway suppressor 2
             (GPS2) pseudogene, an ATP synthase H+ transporting
             mitochondrial F0 complex subunit d (ATP5H) pseudogene,
             part of the gene for a novel protein similar to
             coactivator-associated arginine methyltransferase-1
             (CARM1) and a CpG island, complete sequence
          Length = 109783

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 176   attttcatttcagcctctctga 197
             ||||||||||||||||||||||
Sbjct: 50428 attttcatttcagcctctctga 50449
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>gb|AC152059.4| Mus musculus BAC clone RP24-283B23 from chromosome 12, complete sequence
          Length = 180085

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 439    gaggaggaaggagagtgctagttctt 464
              ||||||||||||| ||||||||||||
Sbjct: 177761 gaggaggaaggagggtgctagttctt 177786
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>emb|AL583892.13| Mouse DNA sequence from clone RP23-32G7 on chromosome 15, complete
              sequence
          Length = 216733

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 439    gaggaggaaggagagtgctagttctt 464
              ||||||||||||| ||||||||||||
Sbjct: 136566 gaggaggaaggagggtgctagttctt 136541
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>emb|AL390056.7| Human DNA sequence from clone RP3-493I16 on chromosome 6 Contains the
             5' end of the RAB3IP2 gene for RAB3 interacting protein 2
             and a CpG island, complete sequence
          Length = 62390

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 378   acagaaggaagtagaaatgta 398
             |||||||||||||||||||||
Sbjct: 22498 acagaaggaagtagaaatgta 22478
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>emb|AL671392.5| Human DNA sequence from clone XXbac-92L3 on chromosome 6, complete
             sequence
          Length = 62014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 378   acagaaggaagtagaaatgta 398
             |||||||||||||||||||||
Sbjct: 29984 acagaaggaagtagaaatgta 30004
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>ref|NM_124465.4| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT5G50870 mRNA, complete cds
          Length = 800

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 482 tgtttcttctttttgggtttggga 505
           ||||||||||||| ||||||||||
Sbjct: 29  tgtttcttcttttagggtttggga 52
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>gb|BC045926.1| Danio rerio zgc:56121, mRNA (cDNA clone MGC:56121 IMAGE:5411602),
           complete cds
          Length = 1472

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 424 agctgctgctgtcaagagga 443
           ||||||||||||||||||||
Sbjct: 287 agctgctgctgtcaagagga 306
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>ref|NM_198980.1| Danio rerio zgc:56121 (zgc:56121), mRNA
          Length = 1472

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 424 agctgctgctgtcaagagga 443
           ||||||||||||||||||||
Sbjct: 287 agctgctgctgtcaagagga 306
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>gb|AC139209.10| Mus musculus chromosome 15, clone RP23-153G2, complete sequence
          Length = 211178

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     cagtatcactccatttgaag 62
              ||||||||||||||||||||
Sbjct: 133571 cagtatcactccatttgaag 133590
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>emb|CR694001.2|CNS0FYFX Tetraodon nigroviridis full-length cDNA
          Length = 1208

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 483  gtttcttctttttgggtttg 502
            ||||||||||||||||||||
Sbjct: 1064 gtttcttctttttgggtttg 1045
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>emb|CR691423.2|CNS0FWGB Tetraodon nigroviridis full-length cDNA
          Length = 1311

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 483  gtttcttctttttgggtttg 502
            ||||||||||||||||||||
Sbjct: 1106 gtttcttctttttgggtttg 1087
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>emb|CR690576.1|CNS0FVSS Tetraodon nigroviridis full-length cDNA
          Length = 1298

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 483  gtttcttctttttgggtttg 502
            ||||||||||||||||||||
Sbjct: 1104 gtttcttctttttgggtttg 1085
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>emb|CR688834.2|CNS0FUGE Tetraodon nigroviridis full-length cDNA
          Length = 1268

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 483  gtttcttctttttgggtttg 502
            ||||||||||||||||||||
Sbjct: 987  gtttcttctttttgggtttg 1006
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>ref|XM_849956.1| PREDICTED: Canis familiaris similar to low density lipoprotein
           receptor adaptor protein 1 (LOC612219), mRNA
          Length = 930

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 424 agctgctgctgtcaagagga 443
           ||||||||||||||||||||
Sbjct: 201 agctgctgctgtcaagagga 220
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>emb|AL606462.5| Human DNA sequence from clone CTD-2090I13 on chromosome 1 Contains a
             novel gene, a nuclear ubiquitous casein kinase and
             cyclin-dependent kinase substrate (NUCKS) pseudogene, a
             ribosomal protein S18 (RPS18) pseudogene and a pseudogene
             similar to part ofbasic transcription factor 3 (BTF3),
             complete sequence
          Length = 112401

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   aagaggaggaaggagagtgc 456
             ||||||||||||||||||||
Sbjct: 90674 aagaggaggaaggagagtgc 90693
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>emb|AL512323.8| Human DNA sequence from clone RP13-445B20 on chromosome 6, complete
              sequence
          Length = 205043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    tttatcaaatgagaaagagaaaaa 286
              ||||||||||| ||||||||||||
Sbjct: 156997 tttatcaaatgtgaaagagaaaaa 157020
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>emb|AL450322.17| Human DNA sequence from clone RP11-184A2 on chromosome 10 Contains the
             3' end of the COPEB gene for core promoter element binding
             protein (GBF ZF9 Zf9 BCD1 CPBP KLF6) and two novel genes,
             complete sequence
          Length = 94162

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   aaagagaaaaatccattata 295
             ||||||||||||||||||||
Sbjct: 50129 aaagagaaaaatccattata 50148
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>emb|AL356213.10| Human DNA sequence from clone RP5-1171F9 on chromosome Xq23-25 Contains
             part of the GRIA3 gene for glutamate receptor,
             ionotrophic, AMPA 3, complete sequence
          Length = 87793

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   caaatgagaaagagaaaaat 287
             ||||||||||||||||||||
Sbjct: 49308 caaatgagaaagagaaaaat 49289
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>gb|AC102705.10| Mus musculus, clone RP24-400C16, complete sequence
          Length = 135473

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    agaagaagagaattaacccc 94
             ||||||||||||||||||||
Sbjct: 55356 agaagaagagaattaacccc 55375
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>ref|XM_777831.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7449-PA,
            isoform A (LOC577616), mRNA
          Length = 3681

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 436  caagaggaggaaggagagtg 455
            ||||||||||||||||||||
Sbjct: 2200 caagaggaggaaggagagtg 2219
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>gb|AY065303.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At5g50870) mRNA, complete cds
          Length = 811

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 482 tgtttcttctttttgggtttggga 505
           ||||||||||||| ||||||||||
Sbjct: 29  tgtttcttcttttagggtttggga 52
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>gb|AE008836.1| Salmonella typhimurium LT2, section 140 of 220 of the complete genome
          Length = 20653

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 237  ggcgtcggcggcatgattcc 256
            ||||||||||||||||||||
Sbjct: 3778 ggcgtcggcggcatgattcc 3797
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>emb|AL627277.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
           complete chromosome; segment 13/20
          Length = 230050

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggcgtcggcggcatgattcc 256
           ||||||||||||||||||||
Sbjct: 444 ggcgtcggcggcatgattcc 463
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>emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome
             5 of Podospora anserina
          Length = 156244

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   cacaggccgagtcccaagcc 156
             ||||||||||||||||||||
Sbjct: 36527 cacaggccgagtcccaagcc 36508
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>gb|AC161575.3| Mus musculus chromosome 15, clone RP24-264K6, complete sequence
          Length = 164213

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     cagtatcactccatttgaag 62
              ||||||||||||||||||||
Sbjct: 133641 cagtatcactccatttgaag 133660
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>gb|AC010139.4|AC010139 Homo sapiens BAC clone RP11-194G10 from 3, complete sequence
          Length = 161407

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttatcaaatgagaaagagaa 283
             ||||||||||||||||||||
Sbjct: 24008 ttatcaaatgagaaagagaa 23989
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>emb|BX834060.1|CNS09YYK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL92ZH05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 791

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 482 tgtttcttctttttgggtttggga 505
           ||||||||||||| ||||||||||
Sbjct: 20  tgtttcttcttttagggtttggga 43
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>gb|AC092704.10| Homo sapiens chromosome 18, clone RP11-687D19, complete sequence
          Length = 185257

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   tgagaaagagaaaaatccat 291
             ||||||||||||||||||||
Sbjct: 98336 tgagaaagagaaaaatccat 98355
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>gb|AC108448.12| Homo sapiens chromosome 11, clone CTD-2544D21, complete sequence
          Length = 198599

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    gagctgctgctgtcaagagg 442
              ||||||||||||||||||||
Sbjct: 147476 gagctgctgctgtcaagagg 147457
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 237     ggcgtcggcggcatgattcc 256
               ||||||||||||||||||||
Sbjct: 2938542 ggcgtcggcggcatgattcc 2938561
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>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0686E09
          Length = 156425

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 180   tcatttcagcctctctgatgatca 203
             |||||||| |||||||||||||||
Sbjct: 23042 tcatttcatcctctctgatgatca 23019
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>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7
          Length = 68726

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 482  tgtttcttctttttgggtttggga 505
            ||||||||||||| ||||||||||
Sbjct: 3537 tgtttcttcttttagggtttggga 3514
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>emb|BX248326.14| Zebrafish DNA sequence from clone DKEY-260N20 in linkage group 20,
              complete sequence
          Length = 182841

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    ctctctgatgatcaatcagc 209
              ||||||||||||||||||||
Sbjct: 168337 ctctctgatgatcaatcagc 168356
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>emb|CR954168.11| Zebrafish DNA sequence from clone DKEY-264P5 in linkage group 19,
             complete sequence
          Length = 128597

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   agctgctgctgtcaagagga 443
             ||||||||||||||||||||
Sbjct: 23632 agctgctgctgtcaagagga 23651
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 237     ggcgtcggcggcatgattcc 256
               ||||||||||||||||||||
Sbjct: 2962339 ggcgtcggcggcatgattcc 2962358
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 237     ggcgtcggcggcatgattcc 256
               ||||||||||||||||||||
Sbjct: 3080613 ggcgtcggcggcatgattcc 3080632
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>gb|AC105072.9| Mus musculus chromosome 5, clone RP24-167C6, complete sequence
          Length = 173710

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     aaagaagaagagaattaacc 92
              ||||||||||||||||||||
Sbjct: 134062 aaagaagaagagaattaacc 134043
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>gb|AC134463.3| Mus musculus BAC clone RP23-425N12 from 5, complete sequence
          Length = 200629

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aaagaagaagagaattaacc 92
             ||||||||||||||||||||
Sbjct: 87233 aaagaagaagagaattaacc 87214
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>emb|AL844486.12| Mouse DNA sequence from clone RP23-249P4 on chromosome 2, complete
              sequence
          Length = 118787

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     agaagaagagaattaacccc 94
              ||||||||||||||||||||
Sbjct: 105908 agaagaagagaattaacccc 105927
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>gb|AC100244.12| Mus musculus chromosome 8, clone RP23-64K12, complete sequence
          Length = 212430

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   aaatgagaaagagaaaaatc 288
             ||||||||||||||||||||
Sbjct: 39483 aaatgagaaagagaaaaatc 39464
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>emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chromosome 4, complete
              sequence
          Length = 174638

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 475    cctattgtgtttcttctttt 494
              ||||||||||||||||||||
Sbjct: 107025 cctattgtgtttcttctttt 107044


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,122,555
Number of Sequences: 3902068
Number of extensions: 7122555
Number of successful extensions: 155487
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 154987
Number of HSP's gapped (non-prelim): 500
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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