>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 36/38 (94%), Positives = 36/38 (94%)
 Frame = -2

Query: 218 GKGAQQGTLPVPEGCTDQNAKNYDPTARSXXGSCLYTF 105
           GKGAQQGTLPVPEGCTDQNAKNYDPTARS  GSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -2

Query: 218 GKGAQQGTLPVPEGCTDQNAKNYDPTARSXXGSCLYTF 105
           GKGAQQ  LPVPEGCTD  A+N+DPTARS  G+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
 Frame = -2

Query: 221 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSXXGSCLYTF 105
           GG+ AQQ G +PVPEGCTD  A NYDPTARS  GSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -2

Query: 218 GKGAQQGTLPVPEGCTDQNAKNYDPTARSXXGSCLY 111
           GK AQQ +LPV +GCTD  AKNYDPTARS  GSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>TFE2_XENLA (Q01978) Transcription factor E2-alpha (Transcription factor|
           XE12/XE47)
          Length = 658

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = -2

Query: 278 FLLRLENSPXTPTI--SCCIGGGKGAQQGTLPVPEGCTDQNAKNYD 147
           F L + N    PT   S   GGG G ++ T   P G  D N   +D
Sbjct: 26  FPLPVANGKTRPTTLASTQFGGGSGLEERTGSAPWGTEDHNGSTFD 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,971,852
Number of Sequences: 219361
Number of extensions: 593022
Number of successful extensions: 1543
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)