ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33d23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC147273.3| Pan troglodytes BAC clone RP43-116B18 from chromo... 48 0.041
2gb|AC102589.9| Mus musculus chromosome 8, clone RP23-334O19, com... 44 0.64
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.64
4gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genom... 44 0.64
5emb|BX950225.10| Zebrafish DNA sequence from clone CH211-173B8 i... 44 0.64
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.64
7emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in... 44 0.64
8emb|BX005180.6| Mouse DNA sequence from clone RP23-414F9 on chro... 44 0.64
9ref|XM_462962.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.5
10gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genom... 42 2.5
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.5
12dbj|AK101639.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.5
13emb|AL355888.3|CNS05TCZ Human chromosome 14 DNA sequence BAC R-3... 42 2.5
14gb|AC171729.1| Lycopersicon esculentum chromosome 01 clone C01HB... 42 2.5
15gb|AC109147.19| Mus musculus chromosome 8, clone RP23-341D16, co... 40 10.0
16gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome... 40 10.0
17gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, co... 40 10.0
18gb|AC116695.12| Mus musculus chromosome 1, clone RP24-407C10, co... 40 10.0
19gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome ... 40 10.0
20gb|AC147901.2| Xenopus tropicalis clone CH216-57C20, complete se... 40 10.0
21gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome 40 10.0
22gb|L22015.2|YSCCHROMI Saccharomyces cerevisiae chromosome I cent... 40 10.0
23gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosom... 40 10.0
24gb|AC165265.2| Mus musculus BAC clone RP23-15M14 from chromosome... 40 10.0
25emb|AL356156.14| Human DNA sequence from clone RP11-351L5 on chr... 40 10.0
26emb|AL354923.12| Human DNA sequence from clone RP11-192E23 on ch... 40 10.0
27gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 10.0
28emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 40 10.0
29emb|BX927382.9| Zebrafish DNA sequence from clone DKEY-168I13 in... 40 10.0
30gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 ma... 40 10.0
31gb|AC018923.21| Homo sapiens 12 BAC RP11-559C10 (Roswell Park Ca... 40 10.0
32gb|AC154518.2| Mus musculus BAC clone RP23-211K12 from chromosom... 40 10.0
33gb|AC091865.3| Homo sapiens chromosome 5 clone CTD-2354N18, comp... 40 10.0
34gb|AC159207.2| Mus musculus BAC clone RP23-150H14 from chromosom... 40 10.0
35gb|AC026722.4|AC026722 Homo sapiens chromosome 5 clone CTD-2203N... 40 10.0
36gb|AF003529.2| Homo sapiens glypican 3 (GPC3) gene, partial cds ... 40 10.0
37emb|BX571975.7| Zebrafish DNA sequence from clone DKEY-77F3 in l... 40 10.0
38dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 10.0
39gb|AC002407.1|AC002407 Human Chromosome X, complete sequence 40 10.0
40gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, compl... 40 10.0
41emb|BX784029.5| Zebrafish DNA sequence from clone DKEY-21H14 in ... 40 10.0
42emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in... 40 10.0
43emb|BX548070.5| Zebrafish DNA sequence from clone CH211-245P7 in... 40 10.0
44gb|AF041468.1| Guillardia theta complete plastid genome 40 10.0
45gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome 40 10.0
46gb|AC154313.2| Mus musculus BAC clone RP23-354M21 from chromosom... 40 10.0
47gb|AC167022.4| Mus musculus BAC clone RP23-183A4 from chromosome... 40 10.0
48emb|AJ404295.1|BSC404295 Borelis schlumbergeri 18S rRNA gene, is... 40 10.0
49gb|M98261.1|YSC138TAU Saccharomyces cerevisiae tau138 (TFC3) gen... 40 10.0 
>gb|AC147273.3| Pan troglodytes BAC clone RP43-116B18 from chromosome 7, complete
             sequence
          Length = 178716

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 603   ataggctttctcacaaactataaa 626
             ||||||||||||||||||||||||
Sbjct: 72447 ataggctttctcacaaactataaa 72424
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>gb|AC102589.9| Mus musculus chromosome 8, clone RP23-334O19, complete sequence
          Length = 234829

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 643    atttacataaaagtaaaatttagcca 668
              ||||||||||| ||||||||||||||
Sbjct: 149529 atttacataaaggtaaaatttagcca 149554
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                            
Query: 416      aaatagtagcacccaacattcacgtatgccacaaacacctgccaaccgcaccccacagcc 475
                |||||||||||||| ||||| | ||| ||||||| |   ||||| || ||||| ||||||
Sbjct: 20534726 aaatagtagcacccgacattgatgtacgccacaatcttttgccatccacacccgacagcc 20534785

                      
Query: 476      acacct 481
                ||||||
Sbjct: 20534786 acacct 20534791



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 419      tagtagcacccaacattcacgtatgccacaaacacctgccaaccgcaccccacagccaca 478
                |||||||| || || || ||||| ||||| ||| | ||||| ||||| ||||| ||||||
Sbjct: 20603497 tagtagcagcctacgttgacgtaggccacgaacgcttgccatccgcagcccacggccaca 20603556

                     
Query: 479      cctgt 483
                |||||
Sbjct: 20603557 cctgt 20603561
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>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence, complete
             sequence
          Length = 101073

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                         
Query: 416   aaatagtagcacccaacattcacgtatgccacaaacacctgccaaccgcaccccacagcc 475
             |||||||||||||| ||||| | ||| ||||||| |   ||||| || ||||| ||||||
Sbjct: 48791 aaatagtagcacccgacattgatgtacgccacaatcttttgccatccacacccgacagcc 48850

                   
Query: 476   acacct 481
             ||||||
Sbjct: 48851 acacct 48856
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>emb|BX950225.10| Zebrafish DNA sequence from clone CH211-173B8 in linkage group 19,
             complete sequence
          Length = 105707

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 643   atttacataaaagtaaaattta 664
             ||||||||||||||||||||||
Sbjct: 99006 atttacataaaagtaaaattta 99027
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                            
Query: 416      aaatagtagcacccaacattcacgtatgccacaaacacctgccaaccgcaccccacagcc 475
                |||||||||||||| ||||| | ||| ||||||| |   ||||| || ||||| ||||||
Sbjct: 20527755 aaatagtagcacccgacattgatgtacgccacaatcttttgccatccacacccgacagcc 20527814

                      
Query: 476      acacct 481
                ||||||
Sbjct: 20527815 acacct 20527820



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 419      tagtagcacccaacattcacgtatgccacaaacacctgccaaccgcaccccacagccaca 478
                |||||||| || || || ||||| ||||| ||| | ||||| ||||| ||||| ||||||
Sbjct: 20596526 tagtagcagcctacgttgacgtaggccacgaacgcttgccatccgcagcccacggccaca 20596585

                     
Query: 479      cctgt 483
                |||||
Sbjct: 20596586 cctgt 20596590
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>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17,
              complete sequence
          Length = 205685

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 93     aaacacaaattacaatttagaa 114
              ||||||||||||||||||||||
Sbjct: 150268 aaacacaaattacaatttagaa 150289
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>emb|BX005180.6| Mouse DNA sequence from clone RP23-414F9 on chromosome X, complete
              sequence
          Length = 148346

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 642    tatttacataaaagtaaaattt 663
              ||||||||||||||||||||||
Sbjct: 124348 tatttacataaaagtaaaattt 124327
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>ref|XM_462962.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1206

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 416 aaatagtagcacccaacattcacgtatgccacaaacacctgccaaccgcaccccacagcc 475
           |||||||||||||| ||||| | ||| ||||||| |   ||||| || ||||| ||||||
Sbjct: 986 aaatagtagcacccgacattgatgtacgccacaatcttttgccatccacacccgacagcc 927

                
Query: 476 acacc 480
           |||||
Sbjct: 926 acacc 922
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>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete
             sequence
          Length = 152417

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                         
Query: 419   tagtagcacccaacattcacgtatgccacaaacacctgccaaccgcaccccacagccaca 478
             |||||||| || || || ||||| ||||| ||| | ||||| ||||| ||||| ||||||
Sbjct: 17254 tagtagcagcctacgttgacgtaggccacgaacgcttgccatccgcagcccacggccaca 17313

                  
Query: 479   cctgt 483
             |||||
Sbjct: 17314 cctgt 17318
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 253     cgcgtgggccttctcgacctc 273
               |||||||||||||||||||||
Sbjct: 3196175 cgcgtgggccttctcgacctc 3196155
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>dbj|AK101639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055G23, full
            insert sequence
          Length = 1734

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  aaatagtagcacccaacattcacgtatgccacaaacacctgccaaccgcaccccacagcc 475
            |||||||||||||| ||||| | ||| ||||||| |   ||||| || ||||| ||||||
Sbjct: 1398 aaatagtagcacccgacattgatgtacgccacaatcttttgccatccacacccgacagcc 1339

                 
Query: 476  acacc 480
            |||||
Sbjct: 1338 acacc 1334
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>emb|AL355888.3|CNS05TCZ Human chromosome 14 DNA sequence BAC R-322L17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 214852

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 93     aaacacaaattacaatttagaaata 117
              ||||||||||||||| |||||||||
Sbjct: 137573 aaacacaaattacaaattagaaata 137549
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>gb|AC171729.1| Lycopersicon esculentum chromosome 01 clone C01HBa0252G05, complete
              sequence
          Length = 163336

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 484    aattaataagaagattatttc 504
              |||||||||||||||||||||
Sbjct: 120331 aattaataagaagattatttc 120311
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>gb|AC109147.19| Mus musculus chromosome 8, clone RP23-341D16, complete sequence
          Length = 184600

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   tacttgtagctacatatttt 196
             ||||||||||||||||||||
Sbjct: 88321 tacttgtagctacatatttt 88340
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>gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome 13, complete sequence
          Length = 213487

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 641    ctatttacataaaagtaaaattta 664
              |||| |||||||||||||||||||
Sbjct: 175548 ctatgtacataaaagtaaaattta 175525
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>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence
          Length = 223764

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gatgagtttctgtataaaga 539
             ||||||||||||||||||||
Sbjct: 58647 gatgagtttctgtataaaga 58666
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>gb|AC116695.12| Mus musculus chromosome 1, clone RP24-407C10, complete sequence
          Length = 199978

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 641    ctatttacataaaagtaaaa 660
              ||||||||||||||||||||
Sbjct: 104986 ctatttacataaaagtaaaa 104967
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>gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome 13, complete sequence
          Length = 216751

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 641   ctatttacataaaagtaaaattta 664
             |||| |||||||||||||||||||
Sbjct: 63594 ctatgtacataaaagtaaaattta 63571
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>gb|AC147901.2| Xenopus tropicalis clone CH216-57C20, complete sequence
          Length = 151523

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 92  taaacacaaattacaatttagaaa 115
           |||||| |||||||||||||||||
Sbjct: 459 taaacataaattacaatttagaaa 436
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>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 584    tattaaggttttgcaaaacatagg 607
              |||||| |||||||||||||||||
Sbjct: 365254 tattaaagttttgcaaaacatagg 365231
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>gb|L22015.2|YSCCHROMI Saccharomyces cerevisiae chromosome I centromere and right arm sequence
          Length = 41988

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 645   ttacataaaagtaaaattta 664
             ||||||||||||||||||||
Sbjct: 14007 ttacataaaagtaaaattta 14026
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>gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosome 14, complete
             sequence
          Length = 159082

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 642   tatttacataaaagtaaaatttag 665
             ||||||||||||||| ||||||||
Sbjct: 32734 tatttacataaaagtgaaatttag 32711
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>gb|AC165265.2| Mus musculus BAC clone RP23-15M14 from chromosome 13, complete sequence
          Length = 237830

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    acaactcagttctgagaaat 136
              ||||||||||||||||||||
Sbjct: 221625 acaactcagttctgagaaat 221606
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>emb|AL356156.14| Human DNA sequence from clone RP11-351L5 on chromosome 9, complete
             sequence
          Length = 130598

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 646   tacataaaagtaaaatttag 665
             ||||||||||||||||||||
Sbjct: 36767 tacataaaagtaaaatttag 36748
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>emb|AL354923.12| Human DNA sequence from clone RP11-192E23 on chromosome 9 Contains the
             3' end of the COL15A1 gene for collagen type XV and a CpG
             island, complete sequence
          Length = 134965

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    caaattacaatttagaaata 117
             ||||||||||||||||||||
Sbjct: 98510 caaattacaatttagaaata 98529
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     gtgggccttctcgacctcat 275
               ||||||||||||||||||||
Sbjct: 2920753 gtgggccttctcgacctcat 2920772
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>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 644     tttacataaaagtaaaattt 663
               ||||||||||||||||||||
Sbjct: 1296851 tttacataaaagtaaaattt 1296832
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>emb|BX927382.9| Zebrafish DNA sequence from clone DKEY-168I13 in linkage group 2,
            complete sequence
          Length = 57395

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 673  ttagagtgatttttccagtt 692
            ||||||||||||||||||||
Sbjct: 3064 ttagagtgatttttccagtt 3083
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>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete
             sequence
          Length = 120938

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    aaattacaatttagaaatac 118
             ||||||||||||||||||||
Sbjct: 17720 aaattacaatttagaaatac 17701
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>gb|AC018923.21| Homo sapiens 12 BAC RP11-559C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152802

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 694    agaacgtaaacactaaaatt 713
              ||||||||||||||||||||
Sbjct: 148114 agaacgtaaacactaaaatt 148133
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>gb|AC154518.2| Mus musculus BAC clone RP23-211K12 from chromosome 16, complete sequence
          Length = 177189

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     taaacacaaattacaatttagaaa 115
              |||| |||||||||||||||||||
Sbjct: 148754 taaatacaaattacaatttagaaa 148777
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>gb|AC091865.3| Homo sapiens chromosome 5 clone CTD-2354N18, complete sequence
          Length = 87256

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   gatgagtttctgtataaaga 539
             ||||||||||||||||||||
Sbjct: 36271 gatgagtttctgtataaaga 36252
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>gb|AC159207.2| Mus musculus BAC clone RP23-150H14 from chromosome 13, complete sequence
          Length = 191824

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    acaactcagttctgagaaat 136
              ||||||||||||||||||||
Sbjct: 100738 acaactcagttctgagaaat 100757
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>gb|AC026722.4|AC026722 Homo sapiens chromosome 5 clone CTD-2203N22, complete sequence
          Length = 150162

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   gatgagtttctgtataaaga 539
             ||||||||||||||||||||
Sbjct: 75445 gatgagtttctgtataaaga 75426
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>gb|AF003529.2| Homo sapiens glypican 3 (GPC3) gene, partial cds and flanking repeat
              regions
          Length = 165658

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    atacaactcagttctgagaa 134
              ||||||||||||||||||||
Sbjct: 159935 atacaactcagttctgagaa 159916
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>emb|BX571975.7| Zebrafish DNA sequence from clone DKEY-77F3 in linkage group 18,
             complete sequence
          Length = 187272

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   cacatcccacattatattaa 589
             ||||||||||||||||||||
Sbjct: 80204 cacatcccacattatattaa 80223
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>dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXE2
          Length = 86854

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    aacacaaattacaatttaga 113
             ||||||||||||||||||||
Sbjct: 20423 aacacaaattacaatttaga 20442
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>gb|AC002407.1|AC002407 Human Chromosome X, complete sequence
          Length = 95506

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   atacaactcagttctgagaa 134
             ||||||||||||||||||||
Sbjct: 20063 atacaactcagttctgagaa 20044
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>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence
          Length = 175641

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    tgttgcaatgaatgtttctt 231
              ||||||||||||||||||||
Sbjct: 117017 tgttgcaatgaatgtttctt 117036
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>emb|BX784029.5| Zebrafish DNA sequence from clone DKEY-21H14 in linkage group 4,
             complete sequence
          Length = 219903

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 643   atttacataaaagtaaaatt 662
             ||||||||||||||||||||
Sbjct: 77898 atttacataaaagtaaaatt 77879



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 643   atttacataaaagtaaaatt 662
             ||||||||||||||||||||
Sbjct: 57915 atttacataaaagtaaaatt 57896
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>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18,
             complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    acaaattacaatttagaaatacaa 120
             |||||||||||| |||||||||||
Sbjct: 25243 acaaattacaatctagaaatacaa 25266
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>emb|BX548070.5| Zebrafish DNA sequence from clone CH211-245P7 in linkage group 18,
             complete sequence
          Length = 173372

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   cacatcccacattatattaa 589
             ||||||||||||||||||||
Sbjct: 77217 cacatcccacattatattaa 77236
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>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 481   tgtaattaataagaagatta 500
             ||||||||||||||||||||
Sbjct: 50703 tgtaattaataagaagatta 50722
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>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 584    tattaaggttttgcaaaacatagg 607
              |||||| |||||||||||||||||
Sbjct: 377831 tattaaagttttgcaaaacatagg 377808
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>gb|AC154313.2| Mus musculus BAC clone RP23-354M21 from chromosome 12, complete sequence
          Length = 220909

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    acatattttgccactgatca 207
              ||||||||||||||||||||
Sbjct: 134367 acatattttgccactgatca 134386
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>gb|AC167022.4| Mus musculus BAC clone RP23-183A4 from chromosome 8, complete sequence
          Length = 224462

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   tacttgtagctacatatttt 196
             ||||||||||||||||||||
Sbjct: 27900 tacttgtagctacatatttt 27881
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>emb|AJ404295.1|BSC404295 Borelis schlumbergeri 18S rRNA gene, isolate 191
          Length = 2744

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 tcaatcatgttgcaatgaat 224
           ||||||||||||||||||||
Sbjct: 231 tcaatcatgttgcaatgaat 212
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>gb|M98261.1|YSC138TAU Saccharomyces cerevisiae tau138 (TFC3) gene, complete cds
          Length = 5096

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 645  ttacataaaagtaaaattta 664
            ||||||||||||||||||||
Sbjct: 4615 ttacataaaagtaaaattta 4596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,141,696
Number of Sequences: 3902068
Number of extensions: 7141696
Number of successful extensions: 133130
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132806
Number of HSP's gapped (non-prelim): 324
length of query: 729
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 706
effective length of database: 17,143,297,704
effective search space: 12103168179024
effective search space used: 12103168179024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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