| Clone Name | rbags32o23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103959.1| Zea mays PCO068678 mRNA sequence Length = 1621 Score = 365 bits (184), Expect = 1e-97 Identities = 340/392 (86%) Strand = Plus / Minus Query: 243 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 302 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1357 gcttctgctgcatctcctttcttgcctttcttcttcttcccaccacccttcttctttgat 1298 Query: 303 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 362 || || |||||||||||||| ||||| ||||| |||| || ||||||||||| | |||| Sbjct: 1297 ttcgtccccaaagcaagccatgcctttatctctgcattgtcttcaatggatttggtgggc 1238 Query: 363 tccaactgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacg 422 | |||| |||||| |||||||| || ||||| || || ||||| ||||||| || ||| Sbjct: 1237 tttaactcctgtagaggatgtgatgttatcttatctgatccattgggcatcagcagcaca 1178 Query: 423 gtgaatttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgc 482 ||||| || ||||| ||||||||||||||| |||| ||||| || |||||||| |||||| Sbjct: 1177 gtgaactttatgtgtgcaacaagatcgcctggcttctcatgaagtacagggtacggctgc 1118 Query: 483 aacagctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgcc 542 || || ||||| ||||||||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1117 aatagttcatggttcatgcattccaccaagcctaaacgcgcacgcttctcttctaatgcc 1058 Query: 543 ctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgat 602 |||||||| || ||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 1057 ctagcagtaaaaggcatgattgggaacttctggctgatctcactgaaaataaaccttgac 998 Query: 603 gccttcatcttcaagtgatagttcttgtctac 634 || ||||||||||||||||| ||||||||||| Sbjct: 997 gctttcatcttcaagtgataattcttgtctac 966 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 113 ccacagctgaatgtaatataacacaatcagatgcagc 149 ||||| |||||||||||||||||| |||||||||||| Sbjct: 1486 ccacaactgaatgtaatataacaccatcagatgcagc 1450
>gb|BT023967.1| Zea mays clone EL01N0406A06 mRNA sequence Length = 1422 Score = 333 bits (168), Expect = 4e-88 Identities = 354/416 (85%) Strand = Plus / Minus Query: 247 ctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgactttg 306 |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 1189 ctgctgcatctcctttcttgcctttcttcttctttccaccacccttcttctttgatttcg 1130 Query: 307 tgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggctcca 366 | |||||||||||||| ||||| ||||| |||| || ||||||||||||| |||| | Sbjct: 1129 tccccaaagcaagccatgcctttatctcagcattgtcttcaatggattttgttggcttta 1070 Query: 367 actgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacggtga 426 ||| |||||| |||| ||| || ||| | || || ||||| ||||| | || ||| |||| Sbjct: 1069 actcctgtagcggatatgatgtaatcctatccgatccattgggcattagcagcacagtga 1010 Query: 427 atttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaaca 486 | || ||||| |||||||| || ||| |||| ||||| || |||||||| |||||||| | Sbjct: 1009 actttatgtgtgcaacaaggtcacctggcttctcatgaagtacagggtacggctgcaata 950 Query: 487 gctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctag 546 ||||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||||| Sbjct: 949 gctcatggttcatgcattccaccaagcctaagcgtgcacgcttctcttctaatgccctag 890 Query: 547 cagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcct 606 ||||||| ||||||||||||||||||||||| || |||||||| || |||||||| || | Sbjct: 889 cagtgaagggcatgattgggaacttctggctgatttcactgaaaataaaccttgacgctt 830 Query: 607 tcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttc 662 ||||||||| || ||| |||||||||||||| || || || || || ||||||||| Sbjct: 829 tcatcttcaggttataattcttgtctacagcccttttgtagatggttgtctgcttc 774 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 119 ctgaatgtaatataacacaatcagatgcagc 149 |||||||||||||||||| |||||||||||| Sbjct: 1313 ctgaatgtaatataacaccatcagatgcagc 1283
>gb|BT016573.1| Zea mays clone Contig406 mRNA sequence Length = 583 Score = 283 bits (143), Expect = 4e-73 Identities = 284/331 (85%) Strand = Plus / Minus Query: 247 ctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgactttg 306 |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 344 ctgctgcatctcctttcttgcctttcttcttctttccaccacccttcttctttgatttcg 285 Query: 307 tgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggctcca 366 | |||||||||||||| ||||| ||||| |||| || ||||||||||||| |||| | Sbjct: 284 tccccaaagcaagccatgcctttatctcagcattgtcttcaatggattttgttggcttta 225 Query: 367 actgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacggtga 426 ||| |||||| |||| ||| || ||| | || || ||||| ||||| | || ||| |||| Sbjct: 224 actcctgtagcggatatgatgtaatcctatccgatccattgggcattagcagcacagtga 165 Query: 427 atttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaaca 486 | || ||||| |||||||| || ||| |||| ||||| || |||||||| |||||||| | Sbjct: 164 actttatgtgtgcaacaaggtcacctggcttctcatgaagtacagggtacggctgcaata 105 Query: 487 gctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctag 546 ||||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||||| Sbjct: 104 gctcatggttcatgcattccaccaagcctaagcgtgcacgcttctcttctaatgccctag 45 Query: 547 cagtgaatggcatgattgggaacttctggct 577 ||||||| ||||||||||||||||||||||| Sbjct: 44 cagtgaagggcatgattgggaacttctggct 14 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 119 ctgaatgtaatataacacaatcagatgcagc 149 |||||||||||||||||| |||||||||||| Sbjct: 468 ctgaatgtaatataacaccatcagatgcagc 438
>dbj|AK102897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112P14, full insert sequence Length = 1530 Score = 266 bits (134), Expect = 8e-68 Identities = 209/234 (89%) Strand = Plus / Minus Query: 429 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 488 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1096 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 1037 Query: 489 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 548 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1036 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 977 Query: 549 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 608 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 976 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 917 Query: 609 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttc 662 |||||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 916 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttc 863 Score = 103 bits (52), Expect = 7e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 243 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 302 ||||||||||||||||||||||| |||||||| || || |||||| |||||||||| Sbjct: 1282 gcttctgctgcatctcctttcttacctttcttcttttttgcaccacttttcttctttgtt 1223 Query: 303 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 362 ||||| |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1222 tttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatggatttagtgggc 1163 Query: 363 tccaactgctgtagtg 378 | ||||| ||| |||| Sbjct: 1162 tgcaactcctgaagtg 1147 Score = 42.1 bits (21), Expect = 2.3 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 113 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 172 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 1407 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1351 Query: 173 ggaagcaattc 183 ||||||||||| Sbjct: 1350 ggaagcaattc 1340
>dbj|AK061712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G08, full insert sequence Length = 1427 Score = 266 bits (134), Expect = 8e-68 Identities = 209/234 (89%) Strand = Plus / Minus Query: 429 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 488 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1098 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 1039 Query: 489 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 548 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1038 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 979 Query: 549 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 608 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 978 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 919 Query: 609 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttc 662 |||||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 918 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttc 865 Score = 103 bits (52), Expect = 7e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 243 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 302 ||||||||||||||||||||||| |||||||| || || |||||| |||||||||| Sbjct: 1284 gcttctgctgcatctcctttcttacctttcttcttttttgcaccacttttcttctttgtt 1225 Query: 303 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 362 ||||| |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1224 tttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatggatttagtgggc 1165 Query: 363 tccaactgctgtagtg 378 | ||||| ||| |||| Sbjct: 1164 tgcaactcctgaagtg 1149 Score = 42.1 bits (21), Expect = 2.3 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 113 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 172 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 1409 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1353 Query: 173 ggaagcaattc 183 ||||||||||| Sbjct: 1352 ggaagcaattc 1342
>gb|AF020787.1|AF020787 Oryza sativa DNA-binding protein GBP16 (Rgbp16) mRNA, complete cds Length = 1422 Score = 266 bits (134), Expect = 8e-68 Identities = 209/234 (89%) Strand = Plus / Minus Query: 429 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 488 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1043 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 984 Query: 489 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 548 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 983 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 924 Query: 549 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 608 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 923 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 864 Query: 609 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttc 662 |||||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 863 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttc 810 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 243 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 302 ||||||||||||||||||||||| |||||||| || | | |||||| |||||||||| Sbjct: 1229 gcttctgctgcatctcctttcttacctttcttcttttgggcaccacttttcttctttgtt 1170 Query: 303 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 362 || || |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1169 ttggtccccaaagcaagccatgccttgatctcagcgtggtcttcaatggatttagtgggc 1110 Query: 363 tccaac 368 | |||| Sbjct: 1109 tgcaac 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 113 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 172 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 1354 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1298 Query: 173 ggaagcaattc 183 ||||||||||| Sbjct: 1297 ggaagcaattc 1287
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 153 bits (77), Expect = 9e-34 Identities = 110/121 (90%) Strand = Plus / Minus Query: 542 cctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttga 601 |||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct: 59679 cctagcagtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctaga 59620 Query: 602 tgccttcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgctt 661 ||| ||||||||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 59619 tgctttcatcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgctt 59560 Query: 662 c 662 | Sbjct: 59559 c 59559 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 468 acagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgtgcacgc 527 |||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct: 59828 acagggtacggctgcaataattcatgattcatgcattccaccaaacctaagcgtgcacgc 59769 Query: 528 ttctcctccaacgccct 544 ||||| ||||| ||||| Sbjct: 59768 ttctcttccaatgccct 59752 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 291 ttcttctttgactttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatg 350 |||||||||| ||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 60218 ttcttctttgtttttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatg 60159 Query: 351 gattttgagggctccaactgctgtagtg 378 ||||| | ||||| ||||| ||| |||| Sbjct: 60158 gatttagtgggctgcaactcctgaagtg 60131 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 243 gcttctgctgcatctcctttctt 265 ||||||||||||||||||||||| Sbjct: 60372 gcttctgctgcatctcctttctt 60350 Score = 42.1 bits (21), Expect = 2.3 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 113 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 172 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 60497 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 60441 Query: 173 ggaagcaattc 183 ||||||||||| Sbjct: 60440 ggaagcaattc 60430
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 153 bits (77), Expect = 9e-34 Identities = 110/121 (90%) Strand = Plus / Minus Query: 542 cctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttga 601 |||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct: 16419242 cctagcagtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctaga 16419183 Query: 602 tgccttcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgctt 661 ||| ||||||||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 16419182 tgctttcatcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgctt 16419123 Query: 662 c 662 | Sbjct: 16419122 c 16419122 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 468 acagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgtgcacgc 527 |||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct: 16419391 acagggtacggctgcaataattcatgattcatgcattccaccaaacctaagcgtgcacgc 16419332 Query: 528 ttctcctccaacgccct 544 ||||| ||||| ||||| Sbjct: 16419331 ttctcttccaatgccct 16419315 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 291 ttcttctttgactttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatg 350 |||||||||| ||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 16419781 ttcttctttgtttttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatg 16419722 Query: 351 gattttgagggctccaactgctgtagtg 378 ||||| | ||||| ||||| ||| |||| Sbjct: 16419721 gatttagtgggctgcaactcctgaagtg 16419694 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 243 gcttctgctgcatctcctttctt 265 ||||||||||||||||||||||| Sbjct: 16419935 gcttctgctgcatctcctttctt 16419913 Score = 42.1 bits (21), Expect = 2.3 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 113 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 172 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 16420060 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 16420004 Query: 173 ggaagcaattc 183 ||||||||||| Sbjct: 16420003 ggaagcaattc 16419993
>gb|BT013897.1| Lycopersicon esculentum clone 132894F, mRNA sequence Length = 1587 Score = 123 bits (62), Expect = 8e-25 Identities = 197/242 (81%) Strand = Plus / Minus Query: 402 ccatttggcatcaacaacacggtgaatttgatgtgggcaacaagatcgccttgcttttca 461 ||||| ||||| |||| ||| ||||| || ||||| ||||| | ||| || | || ||| Sbjct: 1174 ccattaggcattaacagcactgtgaacttaatgtgagcaaccaaatcaccaggtttctca 1115 Query: 462 tggagaacagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgt 521 || |||||||| ||||||||||| |||||||| || | ||||| || | || || || Sbjct: 1114 tgtagaacaggatatggctgcaaaagctcatggttaacacattcaacaaggcccaaacga 1055 Query: 522 gcacgcttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatc 581 || | |||||||||||| |||| || || ||||||||||| ||||||||||| || || Sbjct: 1054 gctctcttctcctccaaatcccttgcggtaaatggcatgatagggaacttctgactgatt 995 Query: 582 tcactgaagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctc 641 |||||||||||||||||||| || |||||||||| || |||| ||||||| ||||||||| Sbjct: 994 tcactgaagatgaaccttgaggctttcatcttcaggttatagctcttgtccacagctctc 935 Query: 642 tt 643 || Sbjct: 934 tt 933 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 258 cctttcttgcctttctttttcttgccaccacccttcttctt 298 |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 1318 cctttctttcctttctttttcttcccaccacctttcttctt 1278
>gb|AF281652.1|AF281652 Atriplex hortensis putative DNA binding protein mRNA, complete cds Length = 1460 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Minus Query: 527 cttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcact 586 |||||||||||||||||| || || ||||||||||| ||||| ||||| | || ||||| Sbjct: 934 cttctcctccaacgcccttgctgtaaatggcatgatagggaatttctgattgatttcact 875 Query: 587 gaagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttata 646 ||| || || |||||||| ||||| ||||||||||| |||||||| |||||||| || || Sbjct: 874 gaaaataaatcttgatgctttcattttcaagtgataattcttgtccacagctcttttgta 815 Query: 647 aatagtggtctgcttc 662 |||||| || |||||| Sbjct: 814 aatagttgtttgcttc 799
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 255 tctcctttcttgcctttctttttct 279 ||||||||||||||||||||||||| Sbjct: 18789971 tctcctttcttgcctttctttttct 18789995
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0071O21 Length = 158410 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 255 tctcctttcttgcctttctttttct 279 ||||||||||||||||||||||||| Sbjct: 132613 tctcctttcttgcctttctttttct 132637
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 255 tctcctttcttgcctttctttttct 279 ||||||||||||||||||||||||| Sbjct: 35336 tctcctttcttgcctttctttttct 35360
>ref|XM_795059.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC581850 (LOC581850), mRNA Length = 1673 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 261 ttcttgcctttctttttcttgcc 283 ||||||||||||||||||||||| Sbjct: 719 ttcttgcctttctttttcttgcc 697
>ref|NM_115039.2| Arabidopsis thaliana ATG2; metalloexopeptidase/ methionyl aminopeptidase AT3G51800 (ATG2) transcript variant AT3G51800.1 mRNA, complete cds Length = 1514 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagtt 855
>ref|NM_180348.1| Arabidopsis thaliana ATG2; metalloexopeptidase/ methionyl aminopeptidase AT3G51800 (ATG2) transcript variant AT3G51800.2 mRNA, complete cds Length = 1541 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagtt 855
>gb|AY142627.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (At3g51800) mRNA, complete cds Length = 1210 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagtt 754
>gb|AY040067.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (At3g51800) mRNA, complete cds Length = 1179 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagtt 754
>gb|AF360226.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (AT3g51800) mRNA, complete cds Length = 1458 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagtt 855
>gb|AF422841.1| Arabidopsis thaliana cell cycle-related nuclear binding protein (cam1) mRNA, complete cds Length = 1179 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagtt 754
>gb|AF332664.1|AF332664 Bothrops alternatus clone BA5 Bov-B LINE, complete sequence Length = 1746 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 ctttcttgcctttctttttctt 280 |||||||||||||||||||||| Sbjct: 634 ctttcttgcctttctttttctt 613
>gb|AY056616.1| Arabidopsis thaliana nuclear DNA-binding protein (CAM1) mRNA, complete cds Length = 1472 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 947 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 888 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 887 attatgaatctggaggccttcatcttcaactgatagtt 850
>emb|BX823040.1|CNS0A71F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZF08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1379 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 926 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 867 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 866 attatgaatctggaggccttcatcttcaactgatagtt 829
>gb|AF300703.1|AF300703 Oryctolagus cuniculus parathyroid hormone-related protein (PTHrP) mRNA, complete cds Length = 534 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 263 cttgcctttctttttcttgcca 284 |||||||||||||||||||||| Sbjct: 387 cttgcctttctttttcttgcca 366
>gb|U72503.1|ATU72503 Arabidopsis thaliana putative nuclear DNA-binding protein G2p (AtG2) mRNA, complete cds Length = 1472 Score = 44.1 bits (22), Expect = 0.58 Identities = 79/98 (80%) Strand = Plus / Minus Query: 528 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 587 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 947 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 888 Query: 588 aagatgaaccttgatgccttcatcttcaagtgatagtt 625 | ||||| || || |||||||||||||| |||||||| Sbjct: 887 attatgaatctggaggccttcatcttcaactgatagtt 850
>gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosome 13, complete sequence Length = 196911 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ggatcatttccattagacact 91 ||||||||||||||||||||| Sbjct: 139501 ggatcatttccattagacact 139481
>ref|NM_001003303.1| Canis familiaris parathyroid hormone-like hormone (PTHLH), mRNA Length = 1166 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ttgcctttctttttcttgcca 284 ||||||||||||||||||||| Sbjct: 553 ttgcctttctttttcttgcca 533
>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the 3' end of a novel gene, complete sequence Length = 188357 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 tttcttgcctttctttttctt 280 ||||||||||||||||||||| Sbjct: 86946 tttcttgcctttctttttctt 86966
>emb|AJ831410.1| Halichoerus grypus partial mRNA for parathyroid hormone related protein (pthlp gene) Length = 1099 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ttgcctttctttttcttgcca 284 ||||||||||||||||||||| Sbjct: 725 ttgcctttctttttcttgcca 705
>gb|AC104639.3| Homo sapiens 3q BAC RP11-672L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187942 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 ttccattagacacttcaaaaaaggt 102 |||||||||||||||||| |||||| Sbjct: 50825 ttccattagacacttcaagaaaggt 50849
>gb|AC093527.2| Homo sapiens chromosome 5 clone RP11-252A23, complete sequence Length = 191035 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 ctgaatgtaatataacacaat 139 ||||||||||||||||||||| Sbjct: 87455 ctgaatgtaatataacacaat 87435
>gb|AC026473.7| Homo sapiens chromosome 16 clone RP11-51O6, complete sequence Length = 170393 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 ttccattagacacttcaaaaaaggt 102 |||||||||||||||||| |||||| Sbjct: 121162 ttccattagacacttcaagaaaggt 121138
>gb|AC091932.2| Homo sapiens chromosome 5 clone RP11-315A16, complete sequence Length = 167799 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 ctcctttcttgcctttctttt 276 ||||||||||||||||||||| Sbjct: 107524 ctcctttcttgcctttctttt 107544
>gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C23, complete sequence Length = 112944 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ctgaatgtaatataacacaat 139 ||||||||||||||||||||| Sbjct: 6299 ctgaatgtaatataacacaat 6319
>gb|AF327654.1|AF327654 Ovis aries parathyroid hormone-related peptide mRNA, partial cds Length = 363 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cttgcctttctttttcttgcc 283 ||||||||||||||||||||| Sbjct: 357 cttgcctttctttttcttgcc 337
>gb|AC002122.1|AC002122 Human unknown clone GS1-293J4 from 5p15.2, complete sequence Length = 79931 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 ctcctttcttgcctttctttt 276 ||||||||||||||||||||| Sbjct: 5003 ctcctttcttgcctttctttt 4983
>dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822I2, complete sequence Length = 196606 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 ctttcttgcctttctttttct 279 ||||||||||||||||||||| Sbjct: 73425 ctttcttgcctttctttttct 73405
>gb|U15593.1|CFU15593 Canis familiaris parathyroid hormone-related protein mRNA, complete cds Length = 1166 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ttgcctttctttttcttgcca 284 ||||||||||||||||||||| Sbjct: 553 ttgcctttctttttcttgcca 533
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence Length = 168677 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gctgcatctcctttcttgcctttc 272 |||||||| ||||||||||||||| Sbjct: 57177 gctgcatcccctttcttgcctttc 57154
>gb|BC068955.1| Xenopus laevis hypothetical protein MGC83228, mRNA (cDNA clone MGC:83228 IMAGE:6635611), complete cds Length = 3638 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ttcttgcctttctttttctt 280 |||||||||||||||||||| Sbjct: 785 ttcttgcctttctttttctt 766
>ref|XM_716436.1| Candida albicans SC5314 hypothetical protein (CaO19_3031), mRNA Length = 882 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ttcttgcctttctttttctt 280 |||||||||||||||||||| Sbjct: 740 ttcttgcctttctttttctt 721
>ref|XM_716165.1| Candida albicans SC5314 hypothetical protein (CaO19_10549), mRNA Length = 882 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ttcttgcctttctttttctt 280 |||||||||||||||||||| Sbjct: 740 ttcttgcctttctttttctt 721
>gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, complete sequence Length = 208480 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 atcatttccattagacacttcaaa 96 |||||||||||| ||||||||||| Sbjct: 134968 atcatttccattggacacttcaaa 134991
>gb|AY193782.2| Sus scrofa parathyroid hormone-like hormone mRNA, complete cds Length = 1336 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ttgcctttctttttcttgcc 283 |||||||||||||||||||| Sbjct: 705 ttgcctttctttttcttgcc 686
>emb|CR762428.7| Zebrafish DNA sequence from clone CH211-172N16 in linkage group 1, complete sequence Length = 140219 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gcagtgaatggcatgattgg 565 |||||||||||||||||||| Sbjct: 98074 gcagtgaatggcatgattgg 98055
>ref|XM_447914.1| Candida glabrata CBS138, CAGL0J04796g partial mRNA Length = 1800 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcttgcctttctttttcttg 281 |||||||||||||||||||| Sbjct: 1765 tcttgcctttctttttcttg 1746
>ref|XM_797333.1| Trypanosoma cruzi strain CL Brener FtsJ cell division protein (Tc00.1047053511619.5) partial mRNA Length = 633 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 ccttcttctttgactttgtgccca 312 ||||||||||||||||||| |||| Sbjct: 25 ccttcttctttgactttgtcccca 2
>ref|XM_798036.1| Trypanosoma cruzi strain CL Brener FtsJ cell division protein (Tc00.1047053507207.19) partial mRNA Length = 1953 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 ccttcttctttgactttgtgccca 312 ||||||||||||||||||| |||| Sbjct: 25 ccttcttctttgactttgtcccca 2
>gb|AC004614.2| Homo sapiens PAC clone RP5-1168D11 from 7, complete sequence Length = 112456 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tctcctttcttgcctttctt 274 |||||||||||||||||||| Sbjct: 23468 tctcctttcttgcctttctt 23449
>gb|AC005999.2| Homo sapiens PAC clone RP4-718N17 from 7, complete sequence Length = 135727 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ggcttctgctgcatctcctt 261 |||||||||||||||||||| Sbjct: 133820 ggcttctgctgcatctcctt 133839
>gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, complete sequence Length = 168008 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tctcctttcttgcctttctt 274 |||||||||||||||||||| Sbjct: 57285 tctcctttcttgcctttctt 57304
>emb|AL593854.6| Human DNA sequence from clone RP11-423B13 on chromosome 6 Contains the 5' part of a novel gene, complete sequence Length = 166869 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcctttcttgcctttctttt 276 |||||||||||||||||||| Sbjct: 98161 tcctttcttgcctttctttt 98142
>emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chromosome 1 Contains ubiquinol-cytochrome c reductase binding (UQCRB) pseudogene, the UAP1 gene for UDP-N-acteylglucosamine pyrophosphorylase 1, the 5' end of the DDR2 gene for discoidin domain receptor family member 2 and a CpG island, complete sequence Length = 152770 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tcctttcttgcctttctttttctt 280 ||||||||| |||||||||||||| Sbjct: 79267 tcctttctttcctttctttttctt 79244
>emb|AL589787.16| Human DNA sequence from clone RP11-422P15 on chromosome 10 Contans the 5' end of the ADAM12 gene for a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna), a novel gene, the 3' end of a novel gene and a CpG island, complete sequence Length = 146287 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tcctttcttgcctttctttttctt 280 ||||||||| |||||||||||||| Sbjct: 17395 tcctttctttcctttctttttctt 17372
>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence Length = 199946 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggtgaatttgatgtgggcaa 441 |||||||||||||||||||| Sbjct: 167175 ggtgaatttgatgtgggcaa 167194
>emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chromosome 1p35-36.2 Contains the 3' end of a novel gene and the gene for a novel actin like protein (LOC81569), complete sequence Length = 154028 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 aacacggtgaatttgatgtg 436 |||||||||||||||||||| Sbjct: 73796 aacacggtgaatttgatgtg 73777
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cttgatctccgcatcatcct 345 |||||||||||||||||||| Sbjct: 352297 cttgatctccgcatcatcct 352278
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcttgcctttctttttcttg 281 |||||||||||||||||||| Sbjct: 455461 tcttgcctttctttttcttg 455442
>gb|DQ099524.1| Rabies virus strain FluryLEP nucleoprotein (NP), phosphoprotein (PP), matrix protein (MP), glycoprotein (GP), and large protein (LP) genes, complete cds Length = 11711 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 2130 actgaagatgaaccttgatg 2149
>gb|AC090424.18| Homo sapiens 12q BAC RP11-428I12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158472 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gcagaaggatcatttccatt 84 |||||||||||||||||||| Sbjct: 112378 gcagaaggatcatttccatt 112359
>emb|AJ831411.1| Phoca vitulina partial mRNA for parathyroid hormone related protein (pthlp gene) Length = 1366 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ttgcctttctttttcttgcc 283 |||||||||||||||||||| Sbjct: 725 ttgcctttctttttcttgcc 706
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 cttgatgccttcatcttcaa 616 |||||||||||||||||||| Sbjct: 1550817 cttgatgccttcatcttcaa 1550836
>emb|BX901938.5| Zebrafish DNA sequence from clone CH211-254D18 in linkage group 1, complete sequence Length = 104059 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 ctttcttgcctttctttttcttgc 282 ||||||| |||||||||||||||| Sbjct: 98034 ctttctttcctttctttttcttgc 98011
>gb|AY056617.1| Arabidopsis thaliana nuclear DNA-binding protein (CAM1) gene, complete cds Length = 4106 Score = 40.1 bits (20), Expect = 9.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 546 gcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcc 605 |||||||||||||| ||||| ||||| |||| || |||| ||||| || || ||| Sbjct: 2893 gcagtgaatggcatacgggggaagttctgtttaatttcgctgattatgaatctggaggcc 2834 Query: 606 ttcatcttcaagtgatagtt 625 ||||||||||| |||||||| Sbjct: 2833 ttcatcttcaactgatagtt 2814
>dbj|AB226447.1| Aspergillus oryzae cDNA, contig sequence: AoEST3309 Length = 924 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctgcggcttctgctgcatct 257 |||||||||||||||||||| Sbjct: 72 ctgcggcttctgctgcatct 53
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctgcggcttctgctgcatct 257 |||||||||||||||||||| Sbjct: 833584 ctgcggcttctgctgcatct 833565
>gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, complete sequence Length = 162705 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 cctttcttgcctttctttttcttg 281 ||||| |||||||||||||||||| Sbjct: 45537 cctttgttgcctttctttttcttg 45560
>gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complete sequence Length = 243558 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tcctttcttgcctttctttttctt 280 ||||||||| |||||||||||||| Sbjct: 123300 tcctttctttcctttctttttctt 123277
>ref|XM_700817.1| PREDICTED: Danio rerio hypothetical protein LOC561194 (LOC561194), partial mRNA Length = 932 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 ctttcttgcctttctttttcttgc 282 ||||||| |||||||||||||||| Sbjct: 215 ctttctttcctttctttttcttgc 192
>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence Length = 198179 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ggtgaatttgatgtgggcaa 441 |||||||||||||||||||| Sbjct: 133062 ggtgaatttgatgtgggcaa 133043
>gb|AF369346.1|AF369346 Rabies virus V077.SHB phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369329.1|AF369329 Rabies virus V466.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369327.1|AF369327 Rabies virus V463.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369316.1|AF369316 Rabies virus C1.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369264.1|AF369264 Rabies virus V015 phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6 clone RP23-208N9, complete sequence Length = 182382 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tccaactgctgtagtggatg 382 |||||||||||||||||||| Sbjct: 86727 tccaactgctgtagtggatg 86708
>gb|DQ011221.1| Rabies virus strain 98 phosphoprotein mRNA, complete cds Length = 914 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 698 actgaagatgaaccttgatg 717
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tcctttcttgcctttctttttctt 280 ||||||||| |||||||||||||| Sbjct: 700316 tcctttctttcctttctttttctt 700339
>ref|NM_213916.1| Sus scrofa parathyroid hormone-like hormone (PTHLH), mRNA Length = 1336 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ttgcctttctttttcttgcc 283 |||||||||||||||||||| Sbjct: 705 ttgcctttctttttcttgcc 686
>gb|AC010358.5|AC010358 Homo sapiens chromosome 5 clone CTD-2031C5, complete sequence Length = 159129 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tcctttcttgcctttctttttctt 280 ||||||||| |||||||||||||| Sbjct: 142931 tcctttctttcctttctttttctt 142908
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cttgatctccgcatcatcct 345 |||||||||||||||||||| Sbjct: 405488 cttgatctccgcatcatcct 405469
>emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chromosome X, complete sequence Length = 189991 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctttctttttcttgccacca 287 |||||||||||||||||||| Sbjct: 163125 ctttctttttcttgccacca 163106
>emb|X13357.1|RHLNMG Rabies virus 3'region of genome encoding leader RNA, N, M1, M2 and G proteins Length = 3385 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 2199 actgaagatgaaccttgatg 2218
>emb|X57783.1|RAVNSPG Rabies virus NS protein gene Length = 991 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 716 actgaagatgaaccttgatg 735
>emb|X55727.1|RHABNSPP Rabies virus CVS-11 NS-phosphoprotein gene Length = 991 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 actgaagatgaaccttgatg 603 |||||||||||||||||||| Sbjct: 716 actgaagatgaaccttgatg 735
>gb|AF049236.1|AF049236 Arabidopsis thaliana putative transmembrane protein G1p (AtG1), putative nuclear DNA-binding protein G2p (AtG2), Em1 protein (ATEM1), putative chlorophyll synthetase (AtG4), putative transmembrane protein G5p (AtG5), putative acyl-coA dehydrogenase (AtG6), and calcium dependent protein kinase genes, complete cds; and unknown genes Length = 60000 Score = 40.1 bits (20), Expect = 9.0 Identities = 65/80 (81%) Strand = Plus / Plus Query: 546 gcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcc 605 |||||||||||||| ||||| ||||| |||| || |||| ||||| || || ||| Sbjct: 14248 gcagtgaatggcatacgggggaagttctgtttaatttcgctgattatgaatctggaggcc 14307 Query: 606 ttcatcttcaagtgatagtt 625 ||||||||||| |||||||| Sbjct: 14308 ttcatcttcaactgatagtt 14327
>dbj|AP001000.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-676M6, complete sequence Length = 204955 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tcctttcttgcctttctttttctt 280 ||||||||| |||||||||||||| Sbjct: 152384 tcctttctttcctttctttttctt 152361
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence Length = 166760 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gactttgtgcccaaagcaag 319 |||||||||||||||||||| Sbjct: 58146 gactttgtgcccaaagcaag 58127
>gb|AC164522.2| Mus musculus chromosome 1, clone RP23-148N9, complete sequence Length = 183664 Score = 40.1 bits (20), Expect = 9.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 233 gggctctgc-ggcttctgctgcatctcctttc 263 ||||||||| |||||||||||||||| ||||| Sbjct: 81392 gggctctgcaggcttctgctgcatctactttc 81423 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,126,123 Number of Sequences: 3902068 Number of extensions: 7126123 Number of successful extensions: 146532 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 146139 Number of HSP's gapped (non-prelim): 389 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)