ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32o17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT018983.1| Zea mays clone Contig429.F mRNA sequence 446 e-122
2ref|NM_189535.2| Oryza sativa (japonica cultivar-group), mRNA 434 e-118
3dbj|AK106425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
5dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
6dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
7gb|AY110899.1| Zea mays CL17715_1 mRNA sequence 172 1e-39
8emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14... 88 5e-14
9ref|NM_120658.3| Arabidopsis thaliana SYP31 (T-SNARE SED 5); t-S... 54 6e-04
10gb|AY066041.1| Arabidopsis thaliana AT5g05760/MJJ3_17 mRNA, comp... 54 6e-04
11gb|AY054184.1| Arabidopsis thaliana AT5g05760/MJJ3_17 mRNA, comp... 54 6e-04
12gb|AF051853.1|AF051853 Arabidopsis thaliana syntaxin of plants 3... 54 6e-04
13emb|BX831775.1|CNS0A0ZY Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
14ref|NM_113342.3| Arabidopsis thaliana SYP32; t-SNARE AT3G24350 (... 52 0.002
15gb|BT008604.1| Arabidopsis thaliana clone U20852 putative syntax... 52 0.002
16emb|BX824376.1|CNS0A5S8 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
17emb|BX823489.1|CNS0A4SG Arabidopsis thaliana Full-length cDNA Co... 52 0.002
18gb|BT004300.1| Arabidopsis thaliana clone RAFL15-50-A12 (R20852)... 52 0.002
19gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, com... 46 0.15
20gb|AF398142.1|AF398142 Brassica rapa subsp. pekinensis t-SNARE S... 46 0.15
21gb|AC157531.2| Pan troglodytes BAC clone CH251-277G13 from chrom... 46 0.15
22dbj|AP000382.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 46 0.15
23ref|XM_955733.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.61
24ref|XM_326781.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.61
25emb|AL157780.12| Human DNA sequence from clone RP11-98E22 on chr... 44 0.61
26emb|BX294016.1|NCB9K17 Neurospora crassa DNA linkage group V BAC... 44 0.61
27gb|BC082388.1| Xenopus laevis MGC81831 protein, mRNA (cDNA clone... 42 2.4
28gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
29gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
30ref|XM_756503.1| Ustilago maydis 521 hypothetical protein (UM054... 42 2.4
31emb|Z94055.1|HS24M15 Human DNA sequence from clone RP1-24M15 on ... 42 2.4
32ref|XM_787061.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.4
33gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequ... 42 2.4
34gb|AC147539.1| Pan troglodytes clone rp43-131i22, complete sequence 42 2.4
35gb|AC007666.12| Homo sapiens chromosome 22 clone p273a17 map 22q... 42 2.4
36gb|AC000052.16| Homo sapiens Chromosome 22q11.2 BAC Clone 77h2 I... 42 2.4
37gb|AC004019.20| Homo sapiens Chromosome 22q11.2 BAC Clone 357f7 ... 42 2.4
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
40dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
41ref|XM_320519.2| Anopheles gambiae str. PEST ENSANGP00000015736 ... 42 2.4
42emb|AL136297.3|CNS01DW1 Human chromosome 14 DNA sequence BAC R-6... 42 2.4
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
44emb|AL356802.5|CNS05TDK Human chromosome 14 DNA sequence BAC C-2... 42 2.4
45gb|AY152678.1| Petromyzon marinus clone 87B05 CD9-like protein m... 42 2.4
46ref|NM_201684.1| Arabidopsis thaliana inositol or phosphatidylin... 40 9.5
47ref|NM_126434.2| Arabidopsis thaliana inositol or phosphatidylin... 40 9.5
48ref|NM_115766.2| Arabidopsis thaliana unknown protein AT3G59040 ... 40 9.5
49ref|NM_202728.1| Arabidopsis thaliana unknown protein AT3G59040 ... 40 9.5
50ref|NM_115765.2| Arabidopsis thaliana TT12 (TRANSPARENT TESTA 12... 40 9.5
51ref|XM_637152.1| Dictyostelium discoideum hypothetical protein (... 40 9.5
52ref|NM_194702.1| Oryza sativa (japonica cultivar-group) putative... 40 9.5
53gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
54gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
55gb|AY190702.1| Pagrus major high mobility group protein mRNA, co... 40 9.5
56gb|AC010921.12| Drosophila melanogaster clone BACR15L12, complet... 40 9.5
57gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
58gb|AC012160.7| Drosophila melanogaster clone BACR06G02, complete... 40 9.5
59gb|BC053199.1| Danio rerio zgc:64014, mRNA (cDNA clone MGC:64014... 40 9.5
60gb|AC158556.9| Mus musculus chromosome 15, clone RP23-140F20, co... 40 9.5
61ref|XM_706421.1| Candida albicans SC5314 putative DNA binding pr... 40 9.5
62ref|XM_706397.1| Candida albicans SC5314 putative DNA binding pr... 40 9.5
63gb|AY816157.1| Schistosoma japonicum SJCHGC04498 protein mRNA, c... 40 9.5
64gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, compl... 40 9.5
65gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
66gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.5
67ref|NM_001032790.1| Ciona intestinalis nucleolin like protein Ci... 40 9.5
68ref|XM_746128.1| Aspergillus fumigatus Af293 nitrilase (Afu6g134... 40 9.5
69ref|XM_751622.1| Ustilago maydis 521 hypothetical protein (UM005... 40 9.5
70ref|XM_756155.1| Ustilago maydis 521 DNA topoisomerase I (UM0510... 40 9.5
71emb|CT010552.2| Xenopus tropicalis finished cDNA, clone TEgg049a17 40 9.5
72gb|AC127595.3| Mus musculus BAC clone RP23-49I18 from chromosome... 40 9.5
73ref|XM_816162.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.5
74gb|BT000951.1| Arabidopsis thaliana clone C105132 unknown protei... 40 9.5
75gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic ... 40 9.5
76gb|AC102145.3| Mus musculus chromosome 6, clone RP23-302K3, comp... 40 9.5
77ref|XM_786340.1| PREDICTED: Strongylocentrotus purpuratus nuclea... 40 9.5
78ref|XM_500969.1| Yarrowia lipolytica CLIB122, YALI0B16324g predi... 40 9.5
79gb|AY333194.1| Anopheles gambiae clone b1bc microsatellite sequence 40 9.5
80emb|AL121925.10|HSJ966J20 Human DNA sequence from clone RP5-966J... 40 9.5
81gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
82emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52),... 40 9.5
83gb|AY080770.1| Arabidopsis thaliana At3g59040 mRNA sequence 40 9.5
84emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, B... 40 9.5
85emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 40 9.5
86gb|AC159091.2| Mus musculus chromosome 15, clone RP24-283J18, co... 40 9.5
87emb|AJ130871.1|DME130871 Drosophila melanogaster mRNA for Bazook... 40 9.5
88ref|NM_199920.1| Danio rerio zgc:64014 (zgc:64014), mRNA 40 9.5
89gb|AC091205.3| Drosophila melanogaster 3L BAC RP98-22N9 (Roswell... 40 9.5
90gb|AC010109.6| Drosophila melanogaster 3L BAC RP98-9B4 (Roswell ... 40 9.5
91gb|AC007196.5| Arabidopsis thaliana chromosome 2 clone T18C20 ma... 40 9.5
92gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
93gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, comple... 40 9.5
94gb|AY056101.1| Arabidopsis thaliana At2g03890/T18C20.9 mRNA, com... 40 9.5
95gb|AC012096.8|AC012096 Drosophila melanogaster, chromosome X, re... 40 9.5
96dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
97dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
98dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
99emb|BX820088.1|CNS0AAEW Arabidopsis thaliana Full-length cDNA Co... 40 9.5
100emb|BX822687.1|CNS0A70A Arabidopsis thaliana Full-length cDNA Co... 40 9.5
101gb|AY942834.1| Adineta ricciae amphiHMG1/2-like protein mRNA, pa... 40 9.5
102dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
103emb|AJ506220.1|ATH506220 Arabidopsis thaliana single-copy transg... 40 9.5
104dbj|AK110742.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.5
105emb|BX323031.7| Zebrafish DNA sequence from clone DKEYP-7B3 in l... 40 9.5
106gb|AY686749.1| Brassica napus AGL15 type 2 gene, promoter and 5'... 40 9.5
107gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 ... 40 9.5
108gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12... 40 9.5
109gb|AC005773.1|AC005773 Homo sapiens chromosome 17, clone hRPK.53... 40 9.5
110gb|L32017.1|USMTOI Ustilago maydis topoisomerase I gene, complet... 40 9.5
111gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
112emb|AM179826.1| Paracentrotus lividus mRNA for transcription fac... 40 9.5
113gb|AC004658.1|AC004658 Drosophila melanogaster DNA sequence (P1s... 40 9.5
114emb|CT025615.4| Zebrafish DNA sequence from clone CH211-66G21 in... 40 9.5
115emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 9.5
116dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.5
117emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chro... 40 9.5
118emb|AL929142.6| Mouse DNA sequence from clone RP23-340A13 on chr... 40 9.5
119gb|M29384.1|HS2IE Herpes simplex virus type 2 immediate-early (I... 40 9.5
120dbj|AB033282.1| Ciona intestinalis mRNA for nucleolin like prote... 40 9.5
121dbj|AB000735.1| Nocardioides sp. genes for 2-carboxybenzaldehyde... 40 9.5

>gb|BT018983.1| Zea mays clone Contig429.F mRNA sequence
          Length = 1428

 Score =  446 bits (225), Expect = e-122
 Identities = 285/305 (93%)
 Strand = Plus / Minus

                                                                        
Query: 202  gccacgaagaatatgaagatcatgaggaacaccatcagcacaaagaatatcttcatcatc 261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 gccacgaagaatatgaagatcatgaggaacaccatcagcacaaagaatatcttcatcatc 1097

                                                                        
Query: 262  agccacctgttcgacgaaatgctgttgaggtacttgaggagctggccctgcgctccctcg 321
            ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| 
Sbjct: 1096 agccacctgttggacgaaatgctgttgagatacttcaggagctggccctgcgctccctcc 1037

                                                                        
Query: 322  acgttggctaccgtctcctccatgttctcatcgattctgattgctagctctccctgctga 381
            ||||| || || || |||||||||||||| || ||||||||||||||||||||||| |||
Sbjct: 1036 acgttagccactgtttcctccatgttctcgtcaattctgattgctagctctccctgttga 977

                                                                        
Query: 382  gacaccatggttgccagctgggtaaagatgttgctcagctcatggatggttgattccaca 441
            || ||||||||||||| ||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 976  gaaaccatggttgccaactgtgtaaatatgttgctcagctcatggattgttgattccaca 917

                                                                        
Query: 442  ttttgaagagcctcagctctgctctgcatgtaactatcctgctgtactgccaattgctgc 501
            |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||
Sbjct: 916  ttttgaagggcctcagctctgctctgcatgtaactgtcctgctgcactgccaattgttgc 857

                 
Query: 502  tgctg 506
            |||||
Sbjct: 856  tgctg 852



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 72/82 (87%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                       
Query: 529 gatgatgatgctccatgatctccgttagtcttcttcctctgaaacaatggcgtagttgca 588
           ||||||||||| ||||| ||||| ||||| ||||||||||| || ||||| |||| ||||
Sbjct: 838 gatgatgatgccccatggtctccattagttttcttcctctggaataatggggtagatgca 779

                                 
Query: 589 gagtcactggccccatggtgct 610
           ||||| |||| |||||||||||
Sbjct: 778 gagtcgctgg-cccatggtgct 758



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 640 aacaaggggccgctgacgaatgaatggatttgatgcatcttttgcagctga 690
           ||||||||| || ||||| |||||||||||||| || || |||||||||||
Sbjct: 725 aacaaggggtcgttgacggatgaatggatttgacgcgtcctttgcagctga 675



to top

>ref|NM_189535.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1340

 Score =  434 bits (219), Expect = e-118
 Identities = 360/405 (88%), Gaps = 9/405 (2%)
 Strand = Plus / Minus

                                                                        
Query: 197  atcatgccacgaagaatatgaagatcatgaggaacaccatcagcacaaagaatatcttca 256
            ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 1198 atcatgcaacgaagaatataaagatcatgaggaaaaccatcagcacaaagaatatcttca 1139

                                                                        
Query: 257  tcatcagccacctgttcgacgaaatgctgttgaggtacttgaggagctggccctgcgctc 316
            |||||||||||| |||||| |||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 1138 tcatcagccaccggttcgatgaaatgctgttgagatacttcagtagctggccctgagctc 1079

                                                                        
Query: 317  cctcgacgttggctaccgtctcctccatgttctcatcgattctgattgctagctctccct 376
            |||| || |||||||  || || |||||||||||||| ||||||||||||||||||||||
Sbjct: 1078 cctcaacattggctagtgtgtcatccatgttctcatcaattctgattgctagctctccct 1019

                                                                        
Query: 377  gctgagacaccatggttgccagctgggtaaagatgttgctcagctcatggatggttgatt 436
            ||||||| ||||| |||||||| || ||||| |||||||| |||||||||||||||||||
Sbjct: 1018 gctgagaaaccatagttgccagttgtgtaaaaatgttgcttagctcatggatggttgatt 959

                                                                        
Query: 437  ccacattttgaagagcctcagctctgctctgcatgtaactatcctgctgtactgccaatt 496
            | |||||||| |||||||| ||||| |||||||||||||| ||||||||||||   ||  
Sbjct: 958  caacattttggagagcctccgctctactctgcatgtaactgtcctgctgtact---aa-- 904

                                                                        
Query: 497  gctgctgctgcatgaaagcaggagacgacgatgatgatgatgctccatgatctccgttag 556
             ||||||||||||||| |   |||| |   ||||||||||||||||||||||||| ||||
Sbjct: 903  -ctgctgctgcatgaatggctgagaag---atgatgatgatgctccatgatctccattag 848

                                                         
Query: 557  tcttcttcctctgaaacaatggcgtagttgcagagtcactggccc 601
            |||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 847  tcttcttcctctgaaacaatggagtagtggcagaatcactggccc 803



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 634 cctgggaacaaggggccgctgacgaatgaatggatttgatgcatcttttgcagctga 690
           ||||| ||||||||| || |||||||  ||||||||||||||||  || ||||||||
Sbjct: 768 cctggtaacaaggggacgttgacgaacaaatggatttgatgcattgttcgcagctga 712



to top

>dbj|AK106425.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B08, full
            insert sequence
          Length = 1346

 Score =  434 bits (219), Expect = e-118
 Identities = 360/405 (88%), Gaps = 9/405 (2%)
 Strand = Plus / Minus

                                                                        
Query: 197  atcatgccacgaagaatatgaagatcatgaggaacaccatcagcacaaagaatatcttca 256
            ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 1204 atcatgcaacgaagaatataaagatcatgaggaaaaccatcagcacaaagaatatcttca 1145

                                                                        
Query: 257  tcatcagccacctgttcgacgaaatgctgttgaggtacttgaggagctggccctgcgctc 316
            |||||||||||| |||||| |||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 1144 tcatcagccaccggttcgatgaaatgctgttgagatacttcagtagctggccctgagctc 1085

                                                                        
Query: 317  cctcgacgttggctaccgtctcctccatgttctcatcgattctgattgctagctctccct 376
            |||| || |||||||  || || |||||||||||||| ||||||||||||||||||||||
Sbjct: 1084 cctcaacattggctagtgtgtcatccatgttctcatcaattctgattgctagctctccct 1025

                                                                        
Query: 377  gctgagacaccatggttgccagctgggtaaagatgttgctcagctcatggatggttgatt 436
            ||||||| ||||| |||||||| || ||||| |||||||| |||||||||||||||||||
Sbjct: 1024 gctgagaaaccatagttgccagttgtgtaaaaatgttgcttagctcatggatggttgatt 965

                                                                        
Query: 437  ccacattttgaagagcctcagctctgctctgcatgtaactatcctgctgtactgccaatt 496
            | |||||||| |||||||| ||||| |||||||||||||| ||||||||||||   ||  
Sbjct: 964  caacattttggagagcctccgctctactctgcatgtaactgtcctgctgtact---aa-- 910

                                                                        
Query: 497  gctgctgctgcatgaaagcaggagacgacgatgatgatgatgctccatgatctccgttag 556
             ||||||||||||||| |   |||| |   ||||||||||||||||||||||||| ||||
Sbjct: 909  -ctgctgctgcatgaatggctgagaag---atgatgatgatgctccatgatctccattag 854

                                                         
Query: 557  tcttcttcctctgaaacaatggcgtagttgcagagtcactggccc 601
            |||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 853  tcttcttcctctgaaacaatggagtagtggcagaatcactggccc 809



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 634 cctgggaacaaggggccgctgacgaatgaatggatttgatgcatcttttgcagctga 690
           ||||| ||||||||| || |||||||  ||||||||||||||||  || ||||||||
Sbjct: 774 cctggtaacaaggggacgttgacgaacaaatggatttgatgcattgttcgcagctga 718



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  198 bits (100), Expect = 2e-47
 Identities = 148/164 (90%)
 Strand = Plus / Minus

                                                                           
Query: 197     atcatgccacgaagaatatgaagatcatgaggaacaccatcagcacaaagaatatcttca 256
               ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 4121082 atcatgcaacgaagaatataaagatcatgaggaaaaccatcagcacaaagaatatcttca 4121023

                                                                           
Query: 257     tcatcagccacctgttcgacgaaatgctgttgaggtacttgaggagctggccctgcgctc 316
               |||||||||||| |||||| |||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 4121022 tcatcagccaccggttcgatgaaatgctgttgagatacttcagtagctggccctgagctc 4120963

                                                           
Query: 317     cctcgacgttggctaccgtctcctccatgttctcatcgattctg 360
               |||| || |||||||  || || |||||||||||||| ||||||
Sbjct: 4120962 cctcaacattggctagtgtgtcatccatgttctcatcaattctg 4120919



 Score =  196 bits (99), Expect = 7e-47
 Identities = 183/209 (87%), Gaps = 9/209 (4%)
 Strand = Plus / Minus

                                                                           
Query: 358     ctgattgctagctctccctgctgagacaccatggttgccagctgggtaaagatgttgctc 417
               |||||||||||||||||||||||||| ||||| |||||||| || ||||| |||||||| 
Sbjct: 4120385 ctgattgctagctctccctgctgagaaaccatagttgccagttgtgtaaaaatgttgctt 4120326

                                                                           
Query: 418     agctcatggatggttgattccacattttgaagagcctcagctctgctctgcatgtaacta 477
               |||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||| 
Sbjct: 4120325 agctcatggatggttgattcaacattttggagagcctccgctctactctgcatgtaactg 4120266

                                                                           
Query: 478     tcctgctgtactgccaattgctgctgctgcatgaaagcaggagacgacgatgatgatgat 537
               ||||||||||||   ||   ||||||||||||||| |   |||| |   |||||||||||
Sbjct: 4120265 tcctgctgtact---aa---ctgctgctgcatgaatggctgagaag---atgatgatgat 4120215

                                            
Query: 538     gctccatgatctccgttagtcttcttcct 566
               |||||||||||||| ||||||||||||||
Sbjct: 4120214 gctccatgatctccattagtcttcttcct 4120186



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 564     cctctgaaacaatggcgtagttgcagagtcactggccc 601
               ||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 4119861 cctctgaaacaatggagtagtggcagaatcactggccc 4119824



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                        
Query: 634     cctgggaacaaggggccgctgacgaatgaatggatttgatgcatcttttgcagctga 690
               ||||| ||||||||| || |||||||  ||||||||||||||||  || ||||||||
Sbjct: 4119789 cctggtaacaaggggacgttgacgaacaaatggatttgatgcattgttcgcagctga 4119733



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 263     gccacctgttcgacgaaatgc 283
               |||||||||||||||||||||
Sbjct: 9643801 gccacctgttcgacgaaatgc 9643821



to top

>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score =  198 bits (100), Expect = 2e-47
 Identities = 148/164 (90%)
 Strand = Plus / Minus

                                                                         
Query: 197   atcatgccacgaagaatatgaagatcatgaggaacaccatcagcacaaagaatatcttca 256
             ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 87825 atcatgcaacgaagaatataaagatcatgaggaaaaccatcagcacaaagaatatcttca 87766

                                                                         
Query: 257   tcatcagccacctgttcgacgaaatgctgttgaggtacttgaggagctggccctgcgctc 316
             |||||||||||| |||||| |||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 87765 tcatcagccaccggttcgatgaaatgctgttgagatacttcagtagctggccctgagctc 87706

                                                         
Query: 317   cctcgacgttggctaccgtctcctccatgttctcatcgattctg 360
             |||| || |||||||  || || |||||||||||||| ||||||
Sbjct: 87705 cctcaacattggctagtgtgtcatccatgttctcatcaattctg 87662



 Score =  196 bits (99), Expect = 7e-47
 Identities = 183/209 (87%), Gaps = 9/209 (4%)
 Strand = Plus / Minus

                                                                         
Query: 358   ctgattgctagctctccctgctgagacaccatggttgccagctgggtaaagatgttgctc 417
             |||||||||||||||||||||||||| ||||| |||||||| || ||||| |||||||| 
Sbjct: 87128 ctgattgctagctctccctgctgagaaaccatagttgccagttgtgtaaaaatgttgctt 87069

                                                                         
Query: 418   agctcatggatggttgattccacattttgaagagcctcagctctgctctgcatgtaacta 477
             |||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||| 
Sbjct: 87068 agctcatggatggttgattcaacattttggagagcctccgctctactctgcatgtaactg 87009

                                                                         
Query: 478   tcctgctgtactgccaattgctgctgctgcatgaaagcaggagacgacgatgatgatgat 537
             ||||||||||||   ||   ||||||||||||||| |   |||| |   |||||||||||
Sbjct: 87008 tcctgctgtact---aa---ctgctgctgcatgaatggctgagaag---atgatgatgat 86958

                                          
Query: 538   gctccatgatctccgttagtcttcttcct 566
             |||||||||||||| ||||||||||||||
Sbjct: 86957 gctccatgatctccattagtcttcttcct 86929



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 564   cctctgaaacaatggcgtagttgcagagtcactggccc 601
             ||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 86604 cctctgaaacaatggagtagtggcagaatcactggccc 86567



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 634   cctgggaacaaggggccgctgacgaatgaatggatttgatgcatcttttgcagctga 690
             ||||| ||||||||| || |||||||  ||||||||||||||||  || ||||||||
Sbjct: 86532 cctggtaacaaggggacgttgacgaacaaatggatttgatgcattgttcgcagctga 86476



to top

>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406H10
          Length = 156419

 Score =  198 bits (100), Expect = 2e-47
 Identities = 148/164 (90%)
 Strand = Plus / Minus

                                                                         
Query: 197   atcatgccacgaagaatatgaagatcatgaggaacaccatcagcacaaagaatatcttca 256
             ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 68053 atcatgcaacgaagaatataaagatcatgaggaaaaccatcagcacaaagaatatcttca 67994

                                                                         
Query: 257   tcatcagccacctgttcgacgaaatgctgttgaggtacttgaggagctggccctgcgctc 316
             |||||||||||| |||||| |||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 67993 tcatcagccaccggttcgatgaaatgctgttgagatacttcagtagctggccctgagctc 67934

                                                         
Query: 317   cctcgacgttggctaccgtctcctccatgttctcatcgattctg 360
             |||| || |||||||  || || |||||||||||||| ||||||
Sbjct: 67933 cctcaacattggctagtgtgtcatccatgttctcatcaattctg 67890



 Score =  196 bits (99), Expect = 7e-47
 Identities = 183/209 (87%), Gaps = 9/209 (4%)
 Strand = Plus / Minus

                                                                         
Query: 358   ctgattgctagctctccctgctgagacaccatggttgccagctgggtaaagatgttgctc 417
             |||||||||||||||||||||||||| ||||| |||||||| || ||||| |||||||| 
Sbjct: 67356 ctgattgctagctctccctgctgagaaaccatagttgccagttgtgtaaaaatgttgctt 67297

                                                                         
Query: 418   agctcatggatggttgattccacattttgaagagcctcagctctgctctgcatgtaacta 477
             |||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||| 
Sbjct: 67296 agctcatggatggttgattcaacattttggagagcctccgctctactctgcatgtaactg 67237

                                                                         
Query: 478   tcctgctgtactgccaattgctgctgctgcatgaaagcaggagacgacgatgatgatgat 537
             ||||||||||||   ||   ||||||||||||||| |   |||| |   |||||||||||
Sbjct: 67236 tcctgctgtact---aa---ctgctgctgcatgaatggctgagaag---atgatgatgat 67186

                                          
Query: 538   gctccatgatctccgttagtcttcttcct 566
             |||||||||||||| ||||||||||||||
Sbjct: 67185 gctccatgatctccattagtcttcttcct 67157



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 564   cctctgaaacaatggcgtagttgcagagtcactggccc 601
             ||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 66832 cctctgaaacaatggagtagtggcagaatcactggccc 66795



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 634   cctgggaacaaggggccgctgacgaatgaatggatttgatgcatcttttgcagctga 690
             ||||| ||||||||| || |||||||  ||||||||||||||||  || ||||||||
Sbjct: 66760 cctggtaacaaggggacgttgacgaacaaatggatttgatgcattgttcgcagctga 66704



to top

>gb|AY110899.1| Zea mays CL17715_1 mRNA sequence
          Length = 833

 Score =  172 bits (87), Expect = 1e-39
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                       
Query: 263 gccacctgttcgacgaaatgctgttgaggtacttgaggagctggccctgcgctccctcga 322
           |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct: 386 gccacctgttggacgaaatgctgttgagatacttcaggagctggccctgcgctccctcca 445

                                                                       
Query: 323 cgttggctaccgtctcctccatgttctcatcgattctgattgctagctctccctgctgag 382
           |||| || || || |||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 446 cgttagccactgtttcctccatgttctcgtcaattctgattgctagctctccctgttgag 505

                          
Query: 383 acaccatggttgcca 397
           | |||||||||||||
Sbjct: 506 aaaccatggttgcca 520



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 529 gatgatgatgctccatgatctccgttagtcttcttcctctgaaacaatggcgtagttgca 588
           ||||||||||| ||||| ||||| ||||||||||||||||| || ||||| |||| ||||
Sbjct: 643 gatgatgatgccccatggtctccattagtcttcttcctctggaataatggggtagatgca 702

                                 
Query: 589 gagtcactggccccatggtgct 610
           ||||| |||| |||||||||||
Sbjct: 703 gagtcgctgg-cccatggtgct 723



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 640 aacaaggggccgctgacgaatgaatggatttgatgcatcttttgcagc 687
           ||||||||| || ||||| |||||||||||||| || || ||||||||
Sbjct: 756 aacaaggggtcgttgacggatgaatggatttgacgcgtcctttgcagc 803



to top

>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3,
             complete sequence
          Length = 96467

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                         
Query: 404   taaagatgttgctcagctcatggatggttgattccacattttgaagagcctcagctctgc 463
             ||||||||||||| |||||||| || || || || |||||||||||||| ||||||||||
Sbjct: 18009 taaagatgttgctgagctcatgaatagtggactcaacattttgaagagcttcagctctgc 17950

                                 
Query: 464   tctgcatgtaactatcctgc 483
             | ||||||||||| ||||||
Sbjct: 17949 tttgcatgtaactgtcctgc 17930



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 200   atgccacgaagaatatgaagatcatgaggaacaccatcagcacaaagaatatcttcatca 259
             ||||||| || |||| ||| | ||||||||| | |||||  |||||||| ||||| ||||
Sbjct: 19431 atgccacaaaaaataagaaaaccatgaggaaaaacatcaatacaaagaaaatcttgatca 19372

                       
Query: 260   tcagccacct 269
             ||||||||||
Sbjct: 19371 tcagccacct 19362



to top

>ref|NM_120658.3| Arabidopsis thaliana SYP31 (T-SNARE SED 5); t-SNARE AT5G05760
           (SYP31) mRNA, complete cds
          Length = 2768

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 340 tccatgttctcatcgattctgattgctagctctcc 374
           ||||| || ||||||||||||||||||||||||||
Sbjct: 987 tccatattgtcatcgattctgattgctagctctcc 953



to top

>gb|AY066041.1| Arabidopsis thaliana AT5g05760/MJJ3_17 mRNA, complete cds
          Length = 1011

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 340 tccatgttctcatcgattctgattgctagctctcc 374
           ||||| || ||||||||||||||||||||||||||
Sbjct: 869 tccatattgtcatcgattctgattgctagctctcc 835



to top

>gb|AY054184.1| Arabidopsis thaliana AT5g05760/MJJ3_17 mRNA, complete cds
          Length = 1347

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 340 tccatgttctcatcgattctgattgctagctctcc 374
           ||||| || ||||||||||||||||||||||||||
Sbjct: 987 tccatattgtcatcgattctgattgctagctctcc 953



to top

>gb|AF051853.1|AF051853 Arabidopsis thaliana syntaxin of plants 31 (SYP31) mRNA, complete
           cds
          Length = 1011

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 340 tccatgttctcatcgattctgattgctagctctcc 374
           ||||| || ||||||||||||||||||||||||||
Sbjct: 869 tccatattgtcatcgattctgattgctagctctcc 835



to top

>emb|BX831775.1|CNS0A0ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH29ZB11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1245

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 340 tccatgttctcatcgattctgattgctagctctcc 374
           ||||| || ||||||||||||||||||||||||||
Sbjct: 982 tccatattgtcatcgattctgattgctagctctcc 948



to top

>ref|NM_113342.3| Arabidopsis thaliana SYP32; t-SNARE AT3G24350 (SYP32) mRNA,
           complete cds
          Length = 1311

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 tccatgttctcatcgattctgattgctagctctccctgctgagacaccatggttgccagc 399
           |||||||| | |||||| |||||||| |  || || || ||||| ||||||||||| || 
Sbjct: 989 tccatgttttgatcgatcctgattgcaatttccccttgttgagaaaccatggttgctagt 930

                                                 
Query: 400 tgggtaaagatgttgctcagctcatggatggttgattc 437
           || || |||||  |||| ||||||||||| ||||||||
Sbjct: 929 tgtgtgaagatactgcttagctcatggattgttgattc 892



to top

>gb|BT008604.1| Arabidopsis thaliana clone U20852 putative syntaxin SYP32
           (At3g24350) mRNA, complete cds
          Length = 1121

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 tccatgttctcatcgattctgattgctagctctccctgctgagacaccatggttgccagc 399
           |||||||| | |||||| |||||||| |  || || || ||||| ||||||||||| || 
Sbjct: 902 tccatgttttgatcgatcctgattgcaatttccccttgttgagaaaccatggttgctagt 843

                                                 
Query: 400 tgggtaaagatgttgctcagctcatggatggttgattc 437
           || || |||||  |||| ||||||||||| ||||||||
Sbjct: 842 tgtgtgaagatactgcttagctcatggattgttgattc 805



to top

>emb|BX824376.1|CNS0A5S8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH44ZD04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1443

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  tccatgttctcatcgattctgattgctagctctccctgctgagacaccatggttgccagc 399
            |||||||| | |||||| |||||||| |  || || || ||||| ||||||||||| || 
Sbjct: 1194 tccatgttttgatcgatcctgattgcgatgtccccttgttgagagaccatggttgcgagt 1135

                                                  
Query: 400  tgggtaaagatgttgctcagctcatggatggttgattc 437
            || || |||||  |||| ||||||||||| ||||||||
Sbjct: 1134 tgtgtgaagatactgcttagctcatggattgttgattc 1097



to top

>emb|BX823489.1|CNS0A4SG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS43ZD01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1499

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  tccatgttctcatcgattctgattgctagctctccctgctgagacaccatggttgccagc 399
            |||||||| | |||||| |||||||| |  || || || ||||| ||||||||||| || 
Sbjct: 1198 tccatgttttgatcgatcctgattgcaatttccccttgttgagaaaccatggttgctagt 1139

                                                  
Query: 400  tgggtaaagatgttgctcagctcatggatggttgattc 437
            || || |||||  |||| ||||||||||| ||||||||
Sbjct: 1138 tgtgtgaagatactgcttagctcatggattgttgattc 1101



to top

>gb|BT004300.1| Arabidopsis thaliana clone RAFL15-50-A12 (R20852) putative syntaxin
           SYP32 (At3g24350) mRNA, complete cds
          Length = 1330

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 tccatgttctcatcgattctgattgctagctctccctgctgagacaccatggttgccagc 399
           |||||||| | |||||| |||||||| |  || || || ||||| ||||||||||| || 
Sbjct: 993 tccatgttttgatcgatcctgattgcaatttccccttgttgagaaaccatggttgctagt 934

                                                 
Query: 400 tgggtaaagatgttgctcagctcatggatggttgattc 437
           || || |||||  |||| ||||||||||| ||||||||
Sbjct: 933 tgtgtgaagatactgcttagctcatggattgttgattc 896



to top

>gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, complete sequence
          Length = 203259

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 381   agacaccatggttgccagctggg 403
             |||||||||||||||||||||||
Sbjct: 96716 agacaccatggttgccagctggg 96738



to top

>gb|AF398142.1|AF398142 Brassica rapa subsp. pekinensis t-SNARE SED5-like protein 2 mRNA,
           partial cds
          Length = 406

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 340 tccatgttctcatcgattctgattgctagctctccctgctgagacaccatg 390
           |||||||||| |||||||||||| || | ||| || |||||||| ||||||
Sbjct: 55  tccatgttctgatcgattctgatagcgatctccccttgctgagaaaccatg 5



to top

>gb|AC157531.2| Pan troglodytes BAC clone CH251-277G13 from chromosome unknown,
             complete sequence
          Length = 183251

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 381   agacaccatggttgccagctggg 403
             |||||||||||||||||||||||
Sbjct: 48689 agacaccatggttgccagctggg 48667



to top

>dbj|AP000382.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7M2
          Length = 80393

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 379   tgagacaccatggttgccagctgggtaaagatgttgctcagctcatggatggttgattc 437
             ||||| ||||||||||| || || || |||||  |||| ||||||||||| ||||||||
Sbjct: 46355 tgagaaaccatggttgctagttgtgtgaagatactgcttagctcatggattgttgattc 46297



to top

>ref|XM_955733.1| Neurospora crassa OR74A hypothetical protein (NCU01289.1) partial
            mRNA
          Length = 1959

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 518  gagacgacgatgatgatgatgc 539
            ||||||||||||||||||||||
Sbjct: 1117 gagacgacgatgatgatgatgc 1138



to top

>ref|XM_326781.1| Neurospora crassa OR74A hypothetical protein (NCU01289.1) partial
            mRNA
          Length = 1959

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 518  gagacgacgatgatgatgatgc 539
            ||||||||||||||||||||||
Sbjct: 1117 gagacgacgatgatgatgatgc 1138



to top

>emb|AL157780.12| Human DNA sequence from clone RP11-98E22 on chromosome 9q33.1-33.3
             Contains a CpG island, complete sequence
          Length = 160114

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 238   agcacaaagaatatcttcatcatcag 263
             |||||||||||||| |||||||||||
Sbjct: 69443 agcacaaagaatatattcatcatcag 69418



to top

>emb|BX294016.1|NCB9K17 Neurospora crassa DNA linkage group V BAC clone B9K17
          Length = 71774

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 518   gagacgacgatgatgatgatgc 539
             ||||||||||||||||||||||
Sbjct: 26238 gagacgacgatgatgatgatgc 26217



to top

>gb|BC082388.1| Xenopus laevis MGC81831 protein, mRNA (cDNA clone MGC:81831
           IMAGE:7008137), complete cds
          Length = 3444

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 514 gcaggagacgacgatgatgatgatg 538
           |||||||| ||||||||||||||||
Sbjct: 530 gcaggagatgacgatgatgatgatg 554



to top

>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 263   gccacctgttcgacgaaatgc 283
             |||||||||||||||||||||
Sbjct: 37328 gccacctgttcgacgaaatgc 37308



to top

>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08,
             complete sequence
          Length = 95638

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 263   gccacctgttcgacgaaatgc 283
             |||||||||||||||||||||
Sbjct: 52048 gccacctgttcgacgaaatgc 52068



to top

>ref|XM_756503.1| Ustilago maydis 521 hypothetical protein (UM05449.1) partial mRNA
          Length = 4446

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 520  gacgacgatgatgatgatgct 540
            |||||||||||||||||||||
Sbjct: 1387 gacgacgatgatgatgatgct 1407



to top

>emb|Z94055.1|HS24M15 Human DNA sequence from clone RP1-24M15 on chromosome 1q24-25 Contains
             part of the TNR gene fortenascin R (restrictin, janusin),
             complete sequence
          Length = 134539

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   aacttaaagaatgtacttggg 164
             |||||||||||||||||||||
Sbjct: 41129 aacttaaagaatgtacttggg 41149



to top

>ref|XM_787061.1| PREDICTED: Strongylocentrotus purpuratus similar to CG3493-PA
           (LOC587326), mRNA
          Length = 855

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 518 gagacgacgatgatgatgatg 538
           |||||||||||||||||||||
Sbjct: 806 gagacgacgatgatgatgatg 786



to top

>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence
          Length = 95814

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 520   gacgacgatgatgatgatgct 540
             |||||||||||||||||||||
Sbjct: 13602 gacgacgatgatgatgatgct 13582



to top

>gb|AC147539.1| Pan troglodytes clone rp43-131i22, complete sequence
          Length = 175485

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    cagctgggtaaagatgttgct 416
              |||||||||||||||||||||
Sbjct: 150489 cagctgggtaaagatgttgct 150509



to top

>gb|AC007666.12| Homo sapiens chromosome 22 clone p273a17 map 22q11.2, complete sequence
          Length = 139388

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 396   cagctgggtaaagatgttgct 416
             |||||||||||||||||||||
Sbjct: 34103 cagctgggtaaagatgttgct 34123



to top

>gb|AC000052.16| Homo sapiens Chromosome 22q11.2 BAC Clone 77h2 In CES Region, complete
              sequence
          Length = 190363

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    cagctgggtaaagatgttgct 416
              |||||||||||||||||||||
Sbjct: 114221 cagctgggtaaagatgttgct 114241



to top

>gb|AC004019.20| Homo sapiens Chromosome 22q11.2 BAC Clone 357f7 In CES Region, complete
              sequence
          Length = 260409

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    cagctgggtaaagatgttgct 416
              |||||||||||||||||||||
Sbjct: 186360 cagctgggtaaagatgttgct 186380



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 263      gccacctgttcgacgaaatgc 283
                |||||||||||||||||||||
Sbjct: 26335496 gccacctgttcgacgaaatgc 26335476



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 491      ccaattgctgctgctgcatg 510
                ||||||||||||||||||||
Sbjct: 18911844 ccaattgctgctgctgcatg 18911825



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 264     ccacctgttcgacgaaatgc 283
               ||||||||||||||||||||
Sbjct: 4996568 ccacctgttcgacgaaatgc 4996587



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 263      gccacctgttcgacgaaatgc 283
                |||||||||||||||||||||
Sbjct: 26354695 gccacctgttcgacgaaatgc 26354715



to top

>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0038F12
          Length = 190014

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 263   gccacctgttcgacgaaatgc 283
             |||||||||||||||||||||
Sbjct: 81804 gccacctgttcgacgaaatgc 81824



to top

>ref|XM_320519.2| Anopheles gambiae str. PEST ENSANGP00000015736
           (ENSANGG00000013247), partial mRNA
          Length = 1437

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 520 gacgacgatgatgatgatgctccat 544
           ||||||||||||| |||||||||||
Sbjct: 641 gacgacgatgatggtgatgctccat 617



to top

>emb|AL136297.3|CNS01DW1 Human chromosome 14 DNA sequence BAC R-60K23 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163918

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 491  ccaattgctgctgctgcatgaaagc 515
            |||||||||||||||||| ||||||
Sbjct: 7042 ccaattgctgctgctgcaagaaagc 7018



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 263      gccacctgttcgacgaaatgc 283
                |||||||||||||||||||||
Sbjct: 26649754 gccacctgttcgacgaaatgc 26649734



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 491      ccaattgctgctgctgcatg 510
                ||||||||||||||||||||
Sbjct: 19071017 ccaattgctgctgctgcatg 19070998



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 264     ccacctgttcgacgaaatgc 283
               ||||||||||||||||||||
Sbjct: 5015352 ccacctgttcgacgaaatgc 5015371



to top

>emb|AL356802.5|CNS05TDK Human chromosome 14 DNA sequence BAC C-2137E9 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 137883

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 491   ccaattgctgctgctgcatgaaagc 515
             |||||||||||||||||| ||||||
Sbjct: 75354 ccaattgctgctgctgcaagaaagc 75378



to top

>gb|AY152678.1| Petromyzon marinus clone 87B05 CD9-like protein mRNA, complete cds
          Length = 1492

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 520 gacgacgatgatgatgatgct 540
           |||||||||||||||||||||
Sbjct: 394 gacgacgatgatgatgatgct 374



to top

>ref|NM_201684.1| Arabidopsis thaliana inositol or phosphatidylinositol kinase/
           phosphotransferase, alcohol group as acceptor AT2G03890
           transcript variant AT2G03890.2 mRNA, complete cds
          Length = 2530

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 176 agacgacgatgatgatgatg 195



to top

>ref|NM_126434.2| Arabidopsis thaliana inositol or phosphatidylinositol kinase/
           phosphotransferase, alcohol group as acceptor AT2G03890
           transcript variant AT2G03890.1 mRNA, complete cds
          Length = 2890

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 176 agacgacgatgatgatgatg 195



to top

>ref|NM_115766.2| Arabidopsis thaliana unknown protein AT3G59040 transcript variant
            AT3G59040.1 mRNA, complete cds
          Length = 1935

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 516  aggagacgacgatgatgatgatgc 539
            |||||| |||||||||||||||||
Sbjct: 1681 aggagatgacgatgatgatgatgc 1704



to top

>ref|NM_202728.1| Arabidopsis thaliana unknown protein AT3G59040 transcript variant
            AT3G59040.2 mRNA, complete cds
          Length = 2312

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 516  aggagacgacgatgatgatgatgc 539
            |||||| |||||||||||||||||
Sbjct: 2058 aggagatgacgatgatgatgatgc 2081



to top

>ref|NM_115765.2| Arabidopsis thaliana TT12 (TRANSPARENT TESTA 12); antiporter/
            transporter AT3G59030 (TT12) mRNA, complete cds
          Length = 2327

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 516  aggagacgacgatgatgatgatgc 539
            |||||| |||||||||||||||||
Sbjct: 1892 aggagatgacgatgatgatgatgc 1869



to top

>ref|XM_637152.1| Dictyostelium discoideum hypothetical protein (DDB0205323), partial
           mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 658 aatgaatggatttgatgcatcttt 681
           |||||||||||||||||| |||||
Sbjct: 126 aatgaatggatttgatgcttcttt 103



to top

>ref|NM_194702.1| Oryza sativa (japonica cultivar-group) putative copia-type
            polyprotein (OSJNBa0020E23.19), mRNA
          Length = 5412

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 264  ccacctgttcgacgaaatgc 283
            ||||||||||||||||||||
Sbjct: 4209 ccacctgttcgacgaaatgc 4228



to top

>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map
             near C10769, complete sequence
          Length = 194856

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   atcttcatcatcagccacct 269
             ||||||||||||||||||||
Sbjct: 12613 atcttcatcatcagccacct 12594



to top

>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map
             near E1419S, complete sequence
          Length = 133421

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   aaagcaggagacgacgatga 530
             ||||||||||||||||||||
Sbjct: 41117 aaagcaggagacgacgatga 41136



to top

>gb|AY190702.1| Pagrus major high mobility group protein mRNA, complete cds
          Length = 1115

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 641 agacgacgatgatgatgatg 660



to top

>gb|AC010921.12| Drosophila melanogaster clone BACR15L12, complete sequence
          Length = 163466

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   gacgacgatgatgatgatgc 539
             ||||||||||||||||||||
Sbjct: 10985 gacgacgatgatgatgatgc 10966



to top

>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08,
              complete sequence
          Length = 197156

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 491    ccaattgctgctgctgcatg 510
              ||||||||||||||||||||
Sbjct: 176211 ccaattgctgctgctgcatg 176192



to top

>gb|AC012160.7| Drosophila melanogaster clone BACR06G02, complete sequence
          Length = 172069

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gacgacgatgatgatgatgc 539
             ||||||||||||||||||||
Sbjct: 92721 gacgacgatgatgatgatgc 92740



to top

>gb|BC053199.1| Danio rerio zgc:64014, mRNA (cDNA clone MGC:64014 IMAGE:6792982),
           complete cds
          Length = 1265

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 736 agacgacgatgatgatgatg 717



to top

>gb|AC158556.9| Mus musculus chromosome 15, clone RP23-140F20, complete sequence
          Length = 203053

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 557    tcttcttcctctgaaacaat 576
              ||||||||||||||||||||
Sbjct: 192824 tcttcttcctctgaaacaat 192843



to top

>ref|XM_706421.1| Candida albicans SC5314 putative DNA binding protein (CaO19.12953),
            mRNA
          Length = 2163

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 519  agacgacgatgatgatgatg 538
            ||||||||||||||||||||
Sbjct: 1863 agacgacgatgatgatgatg 1882



to top

>ref|XM_706397.1| Candida albicans SC5314 putative DNA binding protein (CaO19.5498),
            mRNA
          Length = 2163

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 519  agacgacgatgatgatgatg 538
            ||||||||||||||||||||
Sbjct: 1863 agacgacgatgatgatgatg 1882



to top

>gb|AY816157.1| Schistosoma japonicum SJCHGC04498 protein mRNA, complete cds
          Length = 916

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 207 gaagaatatgaagatcatgaggaa 230
           ||||||||||||||| ||||||||
Sbjct: 636 gaagaatatgaagatgatgaggaa 659



to top

>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence
          Length = 225556

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 518    gagacgacgatgatgatgat 537
              ||||||||||||||||||||
Sbjct: 221882 gagacgacgatgatgatgat 221863



to top

>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   ccaattgctgctgctgcatg 510
             ||||||||||||||||||||
Sbjct: 15566 ccaattgctgctgctgcatg 15547



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 250      atcttcatcatcagccacct 269
                ||||||||||||||||||||
Sbjct: 29126678 atcttcatcatcagccacct 29126697



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 511      aaagcaggagacgacgatga 530
                ||||||||||||||||||||
Sbjct: 23945647 aaagcaggagacgacgatga 23945628



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 511      aaagcaggagacgacgatga 530
                ||||||||||||||||||||
Sbjct: 23864426 aaagcaggagacgacgatga 23864407



to top

>ref|NM_001032790.1| Ciona intestinalis nucleolin like protein CiRGG1 (CiRGG1), mRNA
          Length = 2020

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 498 agacgacgatgatgatgatg 517



to top

>ref|XM_746128.1| Aspergillus fumigatus Af293 nitrilase (Afu6g13450) partial mRNA
          Length = 1260

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 catgaggaacaccatcagca 241
           ||||||||||||||||||||
Sbjct: 964 catgaggaacaccatcagca 945



to top

>ref|XM_751622.1| Ustilago maydis 521 hypothetical protein (UM00568.1) partial mRNA
          Length = 2340

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 520  gacgacgatgatgatgatgc 539
            ||||||||||||||||||||
Sbjct: 2260 gacgacgatgatgatgatgc 2279



to top

>ref|XM_756155.1| Ustilago maydis 521 DNA topoisomerase I (UM05101.1) partial mRNA
          Length = 3060

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 378 agacgacgatgatgatgatg 397



to top

>emb|CT010552.2| Xenopus tropicalis finished cDNA, clone TEgg049a17
          Length = 1770

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 514 agacgacgatgatgatgatg 533



to top

>gb|AC127595.3| Mus musculus BAC clone RP23-49I18 from chromosome 7, complete sequence
          Length = 239586

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 518   gagacgacgatgatgatgat 537
             ||||||||||||||||||||
Sbjct: 23583 gagacgacgatgatgatgat 23564



to top

>ref|XM_816162.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510101.470) partial mRNA
          Length = 1518

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 515 caggagacgacgatgatgatgatg 538
           ||||||| ||||||||||||||||
Sbjct: 829 caggagatgacgatgatgatgatg 806



to top

>gb|BT000951.1| Arabidopsis thaliana clone C105132 unknown protein (At3g59040) mRNA,
            complete cds
          Length = 1612

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 516  aggagacgacgatgatgatgatgc 539
            |||||| |||||||||||||||||
Sbjct: 1473 aggagatgacgatgatgatgatgc 1496



to top

>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete
             sequence
          Length = 91084

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   atcttcatcatcagccacct 269
             ||||||||||||||||||||
Sbjct: 44698 atcttcatcatcagccacct 44679



to top

>gb|AC102145.3| Mus musculus chromosome 6, clone RP23-302K3, complete sequence
          Length = 199882

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   aatatgaagatcatgaggaa 230
             ||||||||||||||||||||
Sbjct: 80311 aatatgaagatcatgaggaa 80292



to top

>ref|XM_786340.1| PREDICTED: Strongylocentrotus purpuratus nuclear histone binding
           protein (LOC373260), mRNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 514 agacgacgatgatgatgatg 533



to top

>ref|XM_500969.1| Yarrowia lipolytica CLIB122, YALI0B16324g predicted mRNA
          Length = 2961

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 520 gacgacgatgatgatgatgc 539
           ||||||||||||||||||||
Sbjct: 289 gacgacgatgatgatgatgc 308



to top

>gb|AY333194.1| Anopheles gambiae clone b1bc microsatellite sequence
          Length = 238

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 488 ctgccaattgctgctgctgc 507
           ||||||||||||||||||||
Sbjct: 149 ctgccaattgctgctgctgc 130



to top

>emb|AL121925.10|HSJ966J20 Human DNA sequence from clone RP5-966J20 on chromosome 20 Contains STSs
             and GSSs, complete sequence
          Length = 39260

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 458   ctctgctctgcatgtaacta 477
             ||||||||||||||||||||
Sbjct: 18350 ctctgctctgcatgtaacta 18331



to top

>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 264     ccacctgttcgacgaaatgc 283
               ||||||||||||||||||||
Sbjct: 1736880 ccacctgttcgacgaaatgc 1736861



to top

>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome
          Length = 154746

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 520    gacgacgatgatgatgatgc 539
              ||||||||||||||||||||
Sbjct: 134036 gacgacgatgatgatgatgc 134055



to top

>gb|AY080770.1| Arabidopsis thaliana At3g59040 mRNA sequence
          Length = 1952

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 516  aggagacgacgatgatgatgatgc 539
            |||||| |||||||||||||||||
Sbjct: 1682 aggagatgacgatgatgatgatgc 1705



to top

>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16
          Length = 89517

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 516   aggagacgacgatgatgatgatgc 539
             |||||| |||||||||||||||||
Sbjct: 34834 aggagatgacgatgatgatgatgc 34811



to top

>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4
          Length = 272698

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   agacgacgatgatgatgatg 538
             ||||||||||||||||||||
Sbjct: 47175 agacgacgatgatgatgatg 47156



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   agacgacgatgatgatgatg 538
             ||||||||||||||||||||
Sbjct: 47148 agacgacgatgatgatgatg 47129



to top

>gb|AC159091.2| Mus musculus chromosome 15, clone RP24-283J18, complete sequence
          Length = 65063

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   tcttcttcctctgaaacaat 576
             ||||||||||||||||||||
Sbjct: 62572 tcttcttcctctgaaacaat 62553



to top

>emb|AJ130871.1|DME130871 Drosophila melanogaster mRNA for Bazooka protein
          Length = 6738

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 520 gacgacgatgatgatgatgc 539
           ||||||||||||||||||||
Sbjct: 756 gacgacgatgatgatgatgc 775



to top

>ref|NM_199920.1| Danio rerio zgc:64014 (zgc:64014), mRNA
          Length = 1265

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 736 agacgacgatgatgatgatg 717



to top

>gb|AC091205.3| Drosophila melanogaster 3L BAC RP98-22N9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170836

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gacgacgatgatgatgatgc 539
             ||||||||||||||||||||
Sbjct: 24389 gacgacgatgatgatgatgc 24408



to top

>gb|AC010109.6| Drosophila melanogaster 3L BAC RP98-9B4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 167675

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gacgacgatgatgatgatgc 539
             ||||||||||||||||||||
Sbjct: 70897 gacgacgatgatgatgatgc 70916



to top

>gb|AC007196.5| Arabidopsis thaliana chromosome 2 clone T18C20 map RNS1, complete
             sequence
          Length = 35137

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   agacgacgatgatgatgatg 538
             ||||||||||||||||||||
Sbjct: 24234 agacgacgatgatgatgatg 24253



to top

>gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23,
              complete sequence
          Length = 151359

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    ccacctgttcgacgaaatgc 283
              ||||||||||||||||||||
Sbjct: 133977 ccacctgttcgacgaaatgc 133958



to top

>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence
          Length = 173808

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    aacttaaagaatgtacttgg 163
              ||||||||||||||||||||
Sbjct: 135788 aacttaaagaatgtacttgg 135807



to top

>gb|AY056101.1| Arabidopsis thaliana At2g03890/T18C20.9 mRNA, complete cds
          Length = 2824

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 175 agacgacgatgatgatgatg 194



to top

>gb|AC012096.8|AC012096 Drosophila melanogaster, chromosome X, region 15E-15F, BAC clone
            BACR18O02, complete sequence
          Length = 177793

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 520  gacgacgatgatgatgatgc 539
            ||||||||||||||||||||
Sbjct: 9110 gacgacgatgatgatgatgc 9129



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 264     ccacctgttcgacgaaatgc 283
               ||||||||||||||||||||
Sbjct: 1736880 ccacctgttcgacgaaatgc 1736861



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 209      agaatatgaagatcatgagg 228
                ||||||||||||||||||||
Sbjct: 10980807 agaatatgaagatcatgagg 10980788



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 250      atcttcatcatcagccacct 269
                ||||||||||||||||||||
Sbjct: 29218100 atcttcatcatcagccacct 29218119



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 511      aaagcaggagacgacgatga 530
                ||||||||||||||||||||
Sbjct: 23857514 aaagcaggagacgacgatga 23857495



to top

>emb|BX820088.1|CNS0AAEW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS72ZD05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2427

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 164 agacgacgatgatgatgatg 183



to top

>emb|BX822687.1|CNS0A70A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB58ZD09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 574

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 516 aggagacgacgatgatgatgatgc 539
           |||||| |||||||||||||||||
Sbjct: 322 aggagatgacgatgatgatgatgc 345



to top

>gb|AY942834.1| Adineta ricciae amphiHMG1/2-like protein mRNA, partial cds
          Length = 487

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 454 agacgacgatgatgatgatg 473



to top

>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0091I19
          Length = 126544

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   agaatatgaagatcatgagg 228
             ||||||||||||||||||||
Sbjct: 42750 agaatatgaagatcatgagg 42731



to top

>emb|AJ506220.1|ATH506220 Arabidopsis thaliana single-copy transgenic T-DNA insertion line,
           clone MDL-AfAf-23_LB
          Length = 471

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 386 agacgacgatgatgatgatg 405



to top

>dbj|AK110742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F09, full
           insert sequence
          Length = 1494

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 ccacctgttcgacgaaatgc 283
           ||||||||||||||||||||
Sbjct: 26  ccacctgttcgacgaaatgc 45



to top

>emb|BX323031.7| Zebrafish DNA sequence from clone DKEYP-7B3 in linkage group 18, complete
              sequence
          Length = 164748

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 519    agacgacgatgatgatgatg 538
              ||||||||||||||||||||
Sbjct: 148180 agacgacgatgatgatgatg 148199



to top

>gb|AY686749.1| Brassica napus AGL15 type 2 gene, promoter and 5' UTR
          Length = 1069

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 30  agacgacgatgatgatgatg 49



to top

>gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 of 74 of the complete
              sequence
          Length = 298703

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 520    gacgacgatgatgatgatgc 539
              ||||||||||||||||||||
Sbjct: 222938 gacgacgatgatgatgatgc 222957



to top

>gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12 of 83 of the complete
              sequence
          Length = 317354

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    gacgacgatgatgatgatgc 539
              ||||||||||||||||||||
Sbjct: 187274 gacgacgatgatgatgatgc 187255



to top

>gb|AC005773.1|AC005773 Homo sapiens chromosome 17, clone hRPK.534_P_15, complete sequence
          Length = 99036

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 670   tgatgcatcttttgcagctg 689
             ||||||||||||||||||||
Sbjct: 23701 tgatgcatcttttgcagctg 23682



to top

>gb|L32017.1|USMTOI Ustilago maydis topoisomerase I gene, complete cds
          Length = 3740

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 519  agacgacgatgatgatgatg 538
            ||||||||||||||||||||
Sbjct: 994  agacgacgatgatgatgatg 1013



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 264     ccacctgttcgacgaaatgc 283
               ||||||||||||||||||||
Sbjct: 1736831 ccacctgttcgacgaaatgc 1736812



to top

>emb|AM179826.1| Paracentrotus lividus mRNA for transcription factor (tcf gene)
          Length = 2525

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 520  gacgacgatgatgatgatgc 539
            ||||||||||||||||||||
Sbjct: 1798 gacgacgatgatgatgatgc 1779



to top

>gb|AC004658.1|AC004658 Drosophila melanogaster DNA sequence (P1s DS00079 (D250) and DS08435
             (D258)), complete sequence
          Length = 94718

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gacgacgatgatgatgatgc 539
             ||||||||||||||||||||
Sbjct: 32493 gacgacgatgatgatgatgc 32512



to top

>emb|CT025615.4| Zebrafish DNA sequence from clone CH211-66G21 in linkage group 14,
             complete sequence
          Length = 27301

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    tactaacaacagatccatcctgga 37
             |||||||||||||||||| |||||
Sbjct: 25649 tactaacaacagatccatactgga 25626



to top

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 520     gacgacgatgatgatgatgc 539
               ||||||||||||||||||||
Sbjct: 2153464 gacgacgatgatgatgatgc 2153445



to top

>dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP13-259F12, complete
              sequence
          Length = 167444

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    agacgacgatgatgatgatg 538
              ||||||||||||||||||||
Sbjct: 110264 agacgacgatgatgatgatg 110245



to top

>emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chromosome 2, complete
             sequence
          Length = 196421

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   agacgacgatgatgatgatg 538
             ||||||||||||||||||||
Sbjct: 40667 agacgacgatgatgatgatg 40686



to top

>emb|AL929142.6| Mouse DNA sequence from clone RP23-340A13 on chromosome 2, complete
             sequence
          Length = 207823

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   gagcctcagctctgctctgc 468
             ||||||||||||||||||||
Sbjct: 16081 gagcctcagctctgctctgc 16062



to top

>gb|M29384.1|HS2IE Herpes simplex virus type 2 immediate-early (IE4) protein mRNA, 5'
            end
          Length = 1560

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 520  gacgacgatgatgatgatgc 539
            ||||||||||||||||||||
Sbjct: 1266 gacgacgatgatgatgatgc 1285



to top

>dbj|AB033282.1| Ciona intestinalis mRNA for nucleolin like protein CiRGG1, complete
           cds
          Length = 2020

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 519 agacgacgatgatgatgatg 538
           ||||||||||||||||||||
Sbjct: 498 agacgacgatgatgatgatg 517



to top

>dbj|AB000735.1| Nocardioides sp. genes for 2-carboxybenzaldehyde dehydrogenase,
            trans-2'-carboxybenzalpyruvate hydratase-aldolase and 5
            ORFs, complete cds
          Length = 16775

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 223  atgaggaacaccatcagcac 242
            ||||||||||||||||||||
Sbjct: 9469 atgaggaacaccatcagcac 9450


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,103,181
Number of Sequences: 3902068
Number of extensions: 7103181
Number of successful extensions: 151986
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150665
Number of HSP's gapped (non-prelim): 1316
length of query: 693
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 670
effective length of database: 17,143,297,704
effective search space: 11486009461680
effective search space used: 11486009461680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top