ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32n22 |
|---|---|
| Clone Library Name | barley_pub |
>HS74L_HUMAN (O95757) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 839 Score = 59.3 bits (142), Expect = 1e-08 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +++DH+D +E +KV SDA +WL K Q+ L +PV+ VS+I K++ LD FC Sbjct: 724 ERYDHLDPTEMEKVEKCISDAMSWLNSKMNAQNKLSLTQDPVVKVSEIVAKSKELDNFCN 783 Query: 498 PIMXXXXXXXXXXXXPLAETPSPEAYTPEEQ-------------SNGADESAEPASDGAQ 358 PI+ P P+A PE++ +G + ++ D +Q Sbjct: 784 PIIY---------------KPKPKAEVPEDKPKANSEHNGPMDGQSGTETKSDSTKDSSQ 828 Query: 357 DEHVGEQMDTD 325 +M+ D Sbjct: 829 HTKSSGEMEVD 839
>HS74L_MOUSE (P48722) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 838 Score = 58.2 bits (139), Expect = 2e-08 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +++DH+D +E ++V SD+ WL K Q+ L +PV+ VS+I K++ LD FC Sbjct: 724 ERYDHLDPAEMERVEKYISDSMNWLNSKMNAQNKLSLTQDPVVKVSEIVTKSKELDNFCN 783 Query: 498 PIMXXXXXXXXXXXXPLAETPSPEAYT------PEEQSNGADESAEPASDGAQDEHVGEQ 337 PI+ E P +A T P + +G++ S +P +Q GE Sbjct: 784 PIVYKPKPK--------VEAPEDKAKTGSEHNGPMDGQSGSETSPDPPKGSSQHTDSGE- 834 Query: 336 MDTD 325 M+ D Sbjct: 835 MEVD 838
>HSP74_HUMAN (P34932) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) (HSP70RY) Length = 840 Score = 44.3 bits (103), Expect = 3e-04 Identities = 27/124 (21%), Positives = 50/124 (40%) Frame = -1 Query: 675 KFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKP 496 ++DH+D ++ KV ++A W+ K Q+ +PV+ +I+ K + L C P Sbjct: 722 QYDHLDAADMTKVEKSTNEAMEWMNNKLNLQNKQSLTMDPVVKSKEIEAKIKELTSTCSP 781 Query: 495 IMXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 316 I+ P P+ P+E+ A+++ G + TD Sbjct: 782 II---------------SKPKPKVEPPKEEQKNAEQNGPVDGQGDNPGPQAAEQGTDTAV 826 Query: 315 PSQA 304 PS + Sbjct: 827 PSDS 830
>HS105_RAT (Q66HA8) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 42.0 bits (97), Expect = 0.002 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +K++HID SE +KV ++ W+ Q H +PV+ +I K + L+ C+ Sbjct: 739 EKYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLHQDPVVRTHEISAKVKELNNVCE 798 Query: 498 PIM 490 P++ Sbjct: 799 PVV 801
>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)| Length = 886 Score = 40.8 bits (94), Expect = 0.004 Identities = 27/117 (23%), Positives = 46/117 (39%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +K+ HI+ E KV + E W K Q+ + +PV+ I+ + +++ C Sbjct: 755 EKYSHIEKDEMAKVEKCLKEKEAWRDSKTSAQNQKAAYQDPVVTAQQIRSEIQSMKFICD 814 Query: 498 PIMXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDT 328 PI+ E P TP E + D P ++G + G+Q T Sbjct: 815 PIINKPKPKPK------EEPPKDNGPTPAEAAK--DGGPAPTTEGEEKMDTGDQAPT 863
>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)| Length = 889 Score = 40.8 bits (94), Expect = 0.004 Identities = 29/123 (23%), Positives = 50/123 (40%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +K+ HI+ + KV + W K Q+ H +PV+ + I+ + +++ C Sbjct: 756 EKYSHIEKEDMAKVEKCVKEKVAWRDSKVNAQNQKAPHQDPVVTAAQIRSEIQSMKFVCD 815 Query: 498 PIMXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKD 319 PI+ E P TPEE + A P ++G + E+MDT Sbjct: 816 PIINKPKPKPK------EEPPKDNGPTPEEAAKDGG-PAPPTTEGGE-----EKMDTSDQ 863 Query: 318 DPS 310 P+ Sbjct: 864 APT 866
>YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III| Length = 776 Score = 40.4 bits (93), Expect = 0.005 Identities = 17/61 (27%), Positives = 30/61 (49%) Frame = -1 Query: 672 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 493 + H+D E +KV+N D + WL E + +Q+ K PV+ +I + + PI Sbjct: 682 YAHLDSKEMEKVINAIEDKKKWLDEARHKQETRSKTDAPVVFTEEILQNKNVFENVVNPI 741 Query: 492 M 490 + Sbjct: 742 L 742
>HSP74_MOUSE (Q61316) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) Length = 841 Score = 40.4 bits (93), Expect = 0.005 Identities = 25/122 (20%), Positives = 48/122 (39%) Frame = -1 Query: 675 KFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKP 496 +++H+D ++ KV ++A W+ K Q+ +PV+ +I+ K + L C P Sbjct: 723 QYEHLDAADVTKVEKSTNEAMEWMNSKLNLQNKQSLTVDPVVKTKEIEAKIKELTSICSP 782 Query: 495 IMXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 316 I+ P P+ P+E+ A+++ G + D Sbjct: 783 II---------------SKPKPKVEPPKEEPKHAEQNGPVDGQGDNPGSQAAEHGADTAV 827 Query: 315 PS 310 PS Sbjct: 828 PS 829
>HS105_HUMAN (Q92598) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| (Antigen NY-CO-25) Length = 858 Score = 40.0 bits (92), Expect = 0.007 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +K++HID SE +KV ++ W+ Q +PV+ +IK K + L+ C+ Sbjct: 738 EKYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKKSLDQDPVVRAQEIKTKIKELNNTCE 797 Query: 498 PIM 490 P++ Sbjct: 798 PVV 800
>HS105_CRIGR (Q60446) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 40.0 bits (92), Expect = 0.007 Identities = 27/120 (22%), Positives = 48/120 (40%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +K++HID SE +KV ++ W+ Q +PV+ +I+ K + L+ C+ Sbjct: 739 EKYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLDQDPVVRTHEIRAKVKELNNVCE 798 Query: 498 PIMXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKD 319 P++ L TP+ +E G D A + H E+ + D Sbjct: 799 PVV--NQPKPKIESPKLERTPNGPNLDKKEDLEGKDNFGAEAPHQNGECHPNEKGSVNMD 856
>HS105_PONPY (Q5R606) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 39.7 bits (91), Expect = 0.009 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +K++HID SE +KV ++ W+ Q +PV+ +IK K + L+ C+ Sbjct: 738 EKYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKESLDQDPVVRAQEIKTKIKELNNTCE 797 Query: 498 PIM 490 P++ Sbjct: 798 PVV 800
>HS105_MOUSE (Q61699) Heat-shock protein 105 kDa (Heat shock-related 100 kDa| protein E7I) (HSP-E7I) (Heat shock 110 kDa protein) (42 degrees C-HSP) Length = 858 Score = 39.3 bits (90), Expect = 0.011 Identities = 17/63 (26%), Positives = 33/63 (52%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 +K++HID SE +KV ++ W+ Q +PV+ +I+ K + L+ C+ Sbjct: 739 EKYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLDQDPVVRTHEIRAKVKELNNVCE 798 Query: 498 PIM 490 P++ Sbjct: 799 PVV 801
>OXRP_RAT (Q63617) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) Length = 999 Score = 38.1 bits (87), Expect = 0.025 Identities = 32/111 (28%), Positives = 48/111 (43%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 Q F ++++ +KV+N D TW +Q LP PVLL DI+ K ALDR + Sbjct: 847 QIFTDVEMTTLEKVIN---DTWTWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQ 903 Query: 498 PIMXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHV 346 ++ P P P++++ E AS G Q+E V Sbjct: 904 YLLNKAKFT----------KPRPR---PKDKNGTRTEPPLNASAGDQEEKV 941
>OXRP_HUMAN (Q9Y4L1) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) Length = 999 Score = 36.6 bits (83), Expect = 0.072 Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 9/127 (7%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCK 499 Q F ++++ +KV+NE W +Q LP PVLL DI+ K ALDR + Sbjct: 847 QIFTEVEMTTLEKVINE---TWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQ 903 Query: 498 PIMXXXXXXX-----XXXXXPLAETPSPEAYTPEEQS----NGADESAEPASDGAQDEHV 346 ++ AE P + + + + G E AEP S+ + E Sbjct: 904 YLLNKAKFTKPRPRPKDKNGTRAEPPLNASASDQGEKVIPPAGQTEDAEPISEPEKVETG 963 Query: 345 GEQMDTD 325 E DT+ Sbjct: 964 SEPGDTE 970
>OXRP_CRIGR (Q60432) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) (170 kDa glucose-regulated protein) Length = 999 Score = 35.8 bits (81), Expect = 0.12 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = -1 Query: 678 QKFDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDR 508 Q F ++++ +KV+N D W +Q LP PVLL DI+ K ALDR Sbjct: 847 QIFTEVEMTTLEKVIN---DTWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDR 900
>HSP68_DROME (O97125) Heat shock protein 68| Length = 635 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = -1 Query: 669 DHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 490 D I ++K +V CS+A WL +N + + K + L++FC PIM Sbjct: 556 DRISAADKSSIVERCSEAMKWL------------DSNTTAEKEEYEYKLKELEQFCSPIM 603
>CLFB_STAAW (Q8NUL0) Clumping factor B precursor (Fibrinogen-binding protein B)| (Fibrinogen receptor B) Length = 907 Score = 31.6 bits (70), Expect = 2.3 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = -1 Query: 441 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 304 +P P+ + + +G+D ++ SD D G D+D D S++ Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624
>CLFB_STAAS (Q6G644) Clumping factor B precursor (Fibrinogen-binding protein B)| (Fibrinogen receptor B) Length = 905 Score = 31.6 bits (70), Expect = 2.3 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = -1 Query: 441 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 304 +P P+ + + +G+D ++ SD D G D+D D S++ Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624
>PTMS_HUMAN (P20962) Parathymosin| Length = 101 Score = 31.2 bits (69), Expect = 3.0 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = -1 Query: 414 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 316 EE+ NGA+E E ++ ++E GE+ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE 70
>ENPL_MOUSE (P08113) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) (ERP99) (Polymorphic tumor rejection antigen 1) (Tumor rejection antigen gp96) Length = 802 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -1 Query: 432 PEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 307 PEA EE ++++E A D QDE GE+MD ++ + Sbjct: 751 PEAQVEEEPEEEPEDTSEDAEDSEQDE--GEEMDAGTEEEEE 790
>HS70L_RAT (P55063) Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein| 1-like) (Heat shock 70 kDa protein 3) (HSP70.3) Length = 641 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = -1 Query: 669 DHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 490 D I S+K+K++++CS+ +WL AN + + K + L+ C PI+ Sbjct: 562 DKISESDKKKILDKCSEVLSWL------------EANQLAEKEEFDHKRKELENMCNPII 609
>PTMS_MOUSE (Q9D0J8) Parathymosin| Length = 100 Score = 30.8 bits (68), Expect = 4.0 Identities = 10/36 (27%), Positives = 23/36 (63%) Frame = -1 Query: 414 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 307 EE+ NGA+E E ++ +D+ G++ D ++++ + Sbjct: 38 EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEDE 73
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%) Frame = -1 Query: 435 SPEAYTPEEQ-------SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 292 SPE P++ +NG+D+ A+P++ AQ++ +D+D++ PS + + S Sbjct: 548 SPEKVGPKQAEDAAKSIANGSDDGAQPSTSTAQEQDDVLIVDSDEEGPSNSTDCS 602
>S6A15_BOVIN (Q9XS59) Orphan sodium- and chloride-dependent neurotransmitter| transporter NTT73 (Orphan transporter v7-3) (Solute carrier family 6 member 15) Length = 729 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/70 (32%), Positives = 34/70 (48%) Frame = +1 Query: 328 GVHLLTHMLILSTVASWFSRLICSI*LFFWCISLG*WGFC*RRGLWFWRWPWFGHDGFAE 507 G +LL ++++L L+ I LFF +S+G G+W + P G GFA Sbjct: 97 GAYLLPYLILL---------LVIGIPLFFLELSVGQRIRRGSIGVWNYISPQLGGIGFAS 147 Query: 508 PVKCFSLLLY 537 V CF + LY Sbjct: 148 CVVCFFVALY 157
>TOLA_ECOLI (P19934) Protein tolA| Length = 421 Score = 30.4 bits (67), Expect = 5.2 Identities = 27/109 (24%), Positives = 38/109 (34%) Frame = -1 Query: 648 KQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXXXX 469 KQK E + + K + DA +D KKKAEA K Sbjct: 130 KQKQAEEAAAKAAADAKAKAEADAKAAEEAAKKAAADAKKKAEA--EAAKAAAEAQKKAE 187 Query: 468 XXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDK 322 + + EA E + A E+AE A A+ + E+ DK Sbjct: 188 AAAAALKKKAEAAEAAAAEARKKAATEAAEKAKAEAEKKAAAEKAAADK 236
>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)| Length = 101 Score = 30.4 bits (67), Expect = 5.2 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = -1 Query: 414 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 316 EE+ NGA+E E ++ +D+ G++ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEE 70
>HS70L_MOUSE (P16627) Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein| 1-like) (Heat shock 70 kDa-like protein 1) (Spermatid-specific heat shock protein 70) Length = 641 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/60 (25%), Positives = 29/60 (48%) Frame = -1 Query: 669 DHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 490 D I S+K+K++++C++ +WL AN + + K + L+ C PI+ Sbjct: 562 DKISESDKKKILDKCNEVLSWL------------EANQLAEKDEFDHKRKELENMCNPII 609
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 29.6 bits (65), Expect = 8.8 Identities = 13/38 (34%), Positives = 26/38 (68%) Frame = -1 Query: 405 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 292 +NG+D+ A+P++ AQ++ +D+D++D S +VS Sbjct: 567 TNGSDDGAQPSTSTAQEQDDVLIVDSDEEDSSNNADVS 604
>PTMS_BOVIN (P08814) Parathymosin| Length = 101 Score = 29.6 bits (65), Expect = 8.8 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = -1 Query: 414 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 316 EE+ NGA+E E ++ ++E G++ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEEEDDGDEEDEEEEE 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,437,751 Number of Sequences: 219361 Number of extensions: 1880348 Number of successful extensions: 5947 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5501 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5928 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
