ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32n02 |
|---|---|
| Clone Library Name | barley_pub |
>MMPL2_MYCTU (Q11171) Putative membrane protein mmpL2| Length = 968 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/63 (26%), Positives = 29/63 (46%) Frame = -2 Query: 238 LGPSCWTLVRLYTAFNPKSKRNKDPFSGMAPATLSWPYTPSSRQASLSMHGLLLVGILRV 59 LGP+ T+ + F+PK + N + + A + WP + ++ GLL + R Sbjct: 343 LGPAVLTVGSFFKLFDPKRRMNTRRWRRVGTAIVRWPGPVLAATCLVASIGLLALPSYRT 402 Query: 58 *YD 50 YD Sbjct: 403 TYD 405
>ACS2L_HUMAN (Q9NUB1) Acetyl-coenzyme A synthetase 2-like, mitochondrial| precursor (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acetyl-CoA synthetase 2) (Acyl-CoA synthetase short-chain family member 1) Length = 689 Score = 30.0 bits (66), Expect = 5.4 Identities = 19/70 (27%), Positives = 28/70 (40%) Frame = -3 Query: 573 CVQDVKWQVGSEYTPADALAQGLKSLALNETRVLSRTIADYFRSL*KLRL**FYVH*NFR 394 CV D+ W G Y L G S+ T V Y+ ++ +L++ FY Sbjct: 333 CVADIGWITGHSYVVYGPLCNGATSVLFESTPVYPNA-GRYWETVERLKINQFYGAPTAV 391 Query: 393 MLLMKLAGVW 364 LL+K W Sbjct: 392 RLLLKYGDAW 401
>PURA_BACHK (Q6HAG9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 231 QVVGL*SGYTLHLTRNPRGTRIHSQVWHQRR*VGR 127 +VVG+ YT + P T +H ++ HQ R VGR Sbjct: 260 RVVGVCKAYTSRVGDGPFPTELHDEIGHQIREVGR 294
>PURA_BACCZ (Q630D5) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 231 QVVGL*SGYTLHLTRNPRGTRIHSQVWHQRR*VGR 127 +VVG+ YT + P T +H ++ HQ R VGR Sbjct: 260 RVVGVCKAYTSRVGDGPFPTELHDEIGHQIREVGR 294
>PURA_BACCR (Q814H1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 231 QVVGL*SGYTLHLTRNPRGTRIHSQVWHQRR*VGR 127 +VVG+ YT + P T +H ++ HQ R VGR Sbjct: 260 RVVGVCKAYTSRVGDGPFPTELHDEIGHQIREVGR 294
>PURA_BACC1 (Q72WW1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 231 QVVGL*SGYTLHLTRNPRGTRIHSQVWHQRR*VGR 127 +VVG+ YT + P T +H ++ HQ R VGR Sbjct: 260 RVVGVCKAYTSRVGDGPFPTELHDEIGHQIREVGR 294
>PURA_BACAN (Q81JI9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 231 QVVGL*SGYTLHLTRNPRGTRIHSQVWHQRR*VGR 127 +VVG+ YT + P T +H ++ HQ R VGR Sbjct: 260 RVVGVCKAYTSRVGDGPFPTELHDEIGHQIREVGR 294
>Y2562_VIBVU (Q8D9N5) Hypothetical protein VV1_2562| Length = 288 Score = 29.3 bits (64), Expect = 9.3 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -3 Query: 195 LTRNPRGTRIHSQVWHQRR*VGRIHLPAGRQVCPCTAFFW 76 L NPR + IH +WH G + L A +C A +W Sbjct: 183 LNHNPRPSLIHGDLWH-----GNVALSAFGPICYDPACYW 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,565,878 Number of Sequences: 219361 Number of extensions: 1822223 Number of successful extensions: 4746 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4635 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4746 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
