ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33b22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY341861.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-li... 892 0.0
2gb|AY341862.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-li... 650 0.0
3ref|NM_191905.1| Oryza sativa (japonica cultivar-group), predic... 276 6e-71
4dbj|AK071909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 6e-71
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 182 7e-43
6dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic D... 182 7e-43
7dbj|AK066990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
8dbj|AK102504.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
9dbj|AK063853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
10dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
11gb|AC144656.12| Medicago truncatula clone mth2-27d4, complete se... 58 3e-05
12dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone... 58 3e-05
13ref|NM_192920.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
14gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
15ref|NM_018416.2| Homo sapiens forkhead box J2 (FOXJ2), mRNA 42 1.7
16gb|AC128715.5| Homo sapiens 3 BAC RP11-727B20 (Roswell Park Canc... 42 1.7
17gb|AC116442.3| Homo sapiens chromosome 3 clone RP11-534H12, comp... 42 1.7
18emb|AL049747.1|HS62D4 Human DNA sequence from clone CITF22-62D4 ... 42 1.7
19emb|AL161978.1|HSM802572 Homo sapiens mRNA; cDNA DKFZp762A1712 (... 42 1.7
20emb|AL596204.8| Mouse DNA sequence from clone RP23-180B18 on chr... 42 1.7
21dbj|AK092529.1| Homo sapiens cDNA FLJ35210 fis, clone PROST1000085 42 1.7
22dbj|AK085445.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 1.7
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
24gb|AC084020.17|AC084020 Mus musculus 11 BAC RP23-301I12 (Roswell... 42 1.7
25gb|AC006511.5| Homo sapiens 12 BAC RPCI11-69M1 (Roswell Park Can... 42 1.7
26gb|AF155132.1|AF155132 Homo sapiens FOXJ2 forkhead factor mRNA, ... 42 1.7
27dbj|AK099836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
28gb|AF038177.1|AF038177 Homo sapiens clone 23899 mRNA sequence 42 1.7
29gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 6.6
30gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chrom... 40 6.6
31ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8... 40 6.6
32gb|AC140251.2| Mus musculus BAC clone RP24-289C19 from chromosom... 40 6.6
33gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromo... 40 6.6
34ref|XM_726292.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.6
35emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in... 40 6.6
36emb|BX546442.2| Human DNA sequence from clone WI2-8829E4 on chro... 40 6.6
37emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on ch... 40 6.6
38emb|AL049589.15|HSJ570L12 Human DNA sequence from clone RP4-570L... 40 6.6
39gb|AC158212.3| Mus musculus chromosome 7, clone RP24-288P9, comp... 40 6.6
40gb|AC160535.3| Mus musculus chromosome 7, clone RP24-298A23, com... 40 6.6
41emb|CR382323.8| Zebrafish DNA sequence from clone DKEY-226M8 in ... 40 6.6
42emb|BX927184.5| Zebrafish DNA sequence from clone DKEY-125I20 in... 40 6.6
43emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, co... 40 6.6
44emb|BX530022.5| Zebrafish DNA sequence from clone DKEY-29A22 in ... 40 6.6
45gb|AY525405.1| Methylophilus methylotrophus methylene tetrahydro... 40 6.6
46emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in... 40 6.6
47gb|AC024566.5|AC024566 Homo sapiens chromosome 5 clone CTD-2135M... 40 6.6
48gb|AC111051.26| Mus musculus chromosome 7, clone RP24-163C20, co... 40 6.6
49gb|AC103563.5| Homo sapiens BAC clone RP11-708D7 from 2, complet... 40 6.6
50gb|AF010238.1|AF010238 Homo sapiens von Hippel-Lindau tumor supp... 40 6.6
51dbj|BS000082.1| Pan troglodytes chromosome 22 clone:RP43-097H18,... 40 6.6
52gb|AC105957.13| Mus musculus chromosome 18, clone RP24-303O20, c... 40 6.6
53dbj|AP001685.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.6
54emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 m... 40 6.6
55emb|AL954175.6| Zebrafish DNA sequence from clone CH211-201N5, c... 40 6.6
56emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 6.6
57dbj|AP000966.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 6.6 
>gb|AY341861.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-like protein (Cpl1)
            mRNA, complete cds; alternatively spliced
          Length = 1906

 Score =  892 bits (450), Expect = 0.0
 Identities = 466/471 (98%), Gaps = 1/471 (0%)
 Strand = Plus / Minus

                                                                        
Query: 17   aaatagctctgccaccaaaattcttgatcctatgaaacccatgtaaataaaattaagaaa 76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 aaatagctctgccaccaaaattcttgatcctatgaaacccatgtaaataaaattaagaaa 1746

                                                                        
Query: 77   aaggcaagtctcaactagctcggtcaa-tgtgtcatgtaagttcttgtccctctatgtga 135
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1745 aaggcaagtctcaactagctcggtcaagtgtgtcatgtaagttcttgtccctctatgtga 1686

                                                                        
Query: 136  gtaaccaacaaactcttcctaacacctgctggaaaacctcagccattatccttttagttg 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1685 gtaaccaacaaactcttcctaacacctgctggaaaacctcagccattatccttttagttg 1626

                                                                        
Query: 196  ccaaacctcttggcaattatgggtcggacgtcatcagcaacagcaagtgtctccaggaat 255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 ccaaacctcttggcaattatgggtcggacgtcatcagcaacagcaagtgtctccaggaat 1566

                                                                        
Query: 256  ggaatcagctgagataatccctcatcaaaggggtcattataccagctctctatgggtata 315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 ggaatcagctgagataatccctcatcaaaggggtcattataccagctctctatgggtata 1506

                                                                        
Query: 316  ccattattcacttgcaactggaaaacctgcggagtgttgtcaattatggcaacctttgca 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 ccattattcacttgcaactggaaaacctgcggagtgttgtcaattatggcaacctttgca 1446

                                                                        
Query: 376  aggtcaactccaataacagtcagatcttttgtgtagccactttccgtaaatacacatgac 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1445 aggtcaactccaataacagtcagatcttttgtgtagccactttccgtaaatacacatgac 1386

                                                               
Query: 436  tcgnggaaaaaacgctnctagaacaatgtgttctntggatcaagcctgtca 486
            ||| |||||||||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 1385 tcgcggaaaaaacgcttcgagaacaatgtgttctctggatcaagcctgtca 1335
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>gb|AY341862.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-like protein (Cpl1)
            gene, complete cds; alternatively spliced
          Length = 5591

 Score =  650 bits (328), Expect = 0.0
 Identities = 328/328 (100%)
 Strand = Plus / Minus

                                                                        
Query: 17   aaatagctctgccaccaaaattcttgatcctatgaaacccatgtaaataaaattaagaaa 76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5511 aaatagctctgccaccaaaattcttgatcctatgaaacccatgtaaataaaattaagaaa 5452

                                                                        
Query: 77   aaggcaagtctcaactagctcggtcaatgtgtcatgtaagttcttgtccctctatgtgag 136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5451 aaggcaagtctcaactagctcggtcaatgtgtcatgtaagttcttgtccctctatgtgag 5392

                                                                        
Query: 137  taaccaacaaactcttcctaacacctgctggaaaacctcagccattatccttttagttgc 196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5391 taaccaacaaactcttcctaacacctgctggaaaacctcagccattatccttttagttgc 5332

                                                                        
Query: 197  caaacctcttggcaattatgggtcggacgtcatcagcaacagcaagtgtctccaggaatg 256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5331 caaacctcttggcaattatgggtcggacgtcatcagcaacagcaagtgtctccaggaatg 5272

                                                                        
Query: 257  gaatcagctgagataatccctcatcaaaggggtcattataccagctctctatgggtatac 316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5271 gaatcagctgagataatccctcatcaaaggggtcattataccagctctctatgggtatac 5212

                                        
Query: 317  cattattcacttgcaactggaaaacctg 344
            ||||||||||||||||||||||||||||
Sbjct: 5211 cattattcacttgcaactggaaaacctg 5184



 Score =  266 bits (134), Expect = 6e-68
 Identities = 143/147 (97%)
 Strand = Plus / Minus

                                                                        
Query: 340  acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5003 acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 4944

                                                                        
Query: 400  tcttttgtgtagccactttccgtaaatacacatgactcgnggaaaaaacgctnctagaac 459
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 4943 tcttttgtgtagccactttccgtaaatacacatgactcgcggaaaaaacgcttcgagaac 4884

                                       
Query: 460  aatgtgttctntggatcaagcctgtca 486
            |||||||||| ||||||||||||||||
Sbjct: 4883 aatgtgttctctggatcaagcctgtca 4857
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>ref|NM_191905.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1632

 Score =  276 bits (139), Expect = 6e-71
 Identities = 250/286 (87%), Gaps = 1/286 (0%)
 Strand = Plus / Minus

                                                                        
Query: 165  tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 224
            ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 1628 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 1570

                                                                        
Query: 225  gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 284
             ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 1569 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 1510

                                                                        
Query: 285  ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 344
            |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 1450

                                                                        
Query: 345  cggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcagatcttt 404
            ||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||| ||
Sbjct: 1449 cggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcagatcctt 1390

                                                          
Query: 405  tgtgtagccactttccgtaaatacacatgactcgnggaaaaaacgc 450
             ||||||| | | |  |||||||||||||||||  ||||| |||||
Sbjct: 1389 cgtgtagctagtgtttgtaaatacacatgactcccggaaataacgc 1344
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>dbj|AK071909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065H16, full
            insert sequence
          Length = 1852

 Score =  276 bits (139), Expect = 6e-71
 Identities = 250/286 (87%), Gaps = 1/286 (0%)
 Strand = Plus / Minus

                                                                        
Query: 165  tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 224
            ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 1628 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 1570

                                                                        
Query: 225  gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 284
             ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 1569 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 1510

                                                                        
Query: 285  ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 344
            |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 1450

                                                                        
Query: 345  cggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcagatcttt 404
            ||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||| ||
Sbjct: 1449 cggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcagatcctt 1390

                                                          
Query: 405  tgtgtagccactttccgtaaatacacatgactcgnggaaaaaacgc 450
             ||||||| | | |  |||||||||||||||||  ||||| |||||
Sbjct: 1389 cgtgtagctagtgtttgtaaatacacatgactcccggaaataacgc 1344



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 20   tagctctgccaccaaaattcttgatcctatgaaa 53
            |||||||  ||||||||||||| |||||||||||
Sbjct: 1772 tagctctaacaccaaaattcttaatcctatgaaa 1739
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  182 bits (92), Expect = 7e-43
 Identities = 159/180 (88%), Gaps = 1/180 (0%)
 Strand = Plus / Plus

                                                                            
Query: 165      tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 224
                ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 27172186 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 27172244

                                                                            
Query: 225      gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 284
                 ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 27172245 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 27172304

                                                                            
Query: 285      ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 344
                |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27172305 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 27172364



 Score =  103 bits (52), Expect = 5e-19
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                            
Query: 340      acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 399
                |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||
Sbjct: 27172550 acctgcggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcaga 27172609

                                                                   
Query: 400      tcttttgtgtagccactttccgtaaatacacatgactcgnggaaaaaacgc 450
                || || ||||||| | | |  |||||||||||||||||  ||||| |||||
Sbjct: 27172610 tccttcgtgtagctagtgtttgtaaatacacatgactcccggaaataacgc 27172660



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                            
Query: 284      aggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacct 343
                ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 25133867 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactggaaaacct 25133808

                 
Query: 344      g 344
                |
Sbjct: 25133807 g 25133807



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                            
Query: 340      acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 399
                ||||| ||||| ||||||| |||  |||| ||||| ||||||||||||| ||  ||||||
Sbjct: 25133533 acctgtggagtattgtcaactattacaacttttgccaggtcaactccaagaattgtcaga 25133474

                             
Query: 400      tcttttgtgtagc 412
                || ||||| ||||
Sbjct: 25133473 tcctttgtatagc 25133461



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 20       tagctctgccaccaaaattcttgatcctatgaaa 53
                |||||||  ||||||||||||| |||||||||||
Sbjct: 27172042 tagctctaacaccaaaattcttaatcctatgaaa 27172075
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>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003E08
          Length = 135014

 Score =  182 bits (92), Expect = 7e-43
 Identities = 159/180 (88%), Gaps = 1/180 (0%)
 Strand = Plus / Plus

                                                                         
Query: 165   tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 224
             ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 79864 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 79922

                                                                         
Query: 225   gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 284
              ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 79923 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 79982

                                                                         
Query: 285   ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 344
             |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79983 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 80042



 Score =  103 bits (52), Expect = 5e-19
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                         
Query: 340   acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 399
             |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||
Sbjct: 80228 acctgcggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcaga 80287

                                                                
Query: 400   tcttttgtgtagccactttccgtaaatacacatgactcgnggaaaaaacgc 450
             || || ||||||| | | |  |||||||||||||||||  ||||| |||||
Sbjct: 80288 tccttcgtgtagctagtgtttgtaaatacacatgactcccggaaataacgc 80338



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 20    tagctctgccaccaaaattcttgatcctatgaaa 53
             |||||||  ||||||||||||| |||||||||||
Sbjct: 79720 tagctctaacaccaaaattcttaatcctatgaaa 79753
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>dbj|AK066990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093I20, full
            insert sequence
          Length = 3361

 Score =  182 bits (92), Expect = 7e-43
 Identities = 159/180 (88%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                        
Query: 165  tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 224
            ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 3140 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 3082

                                                                        
Query: 225  gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 284
             ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 3081 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 3022

                                                                        
Query: 285  ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 344
            |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 2962



 Score =  103 bits (52), Expect = 5e-19
 Identities = 96/111 (86%)
 Strand = Plus / Minus

                                                                        
Query: 340  acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 399
            |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||
Sbjct: 2776 acctgcggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcaga 2717

                                                               
Query: 400  tcttttgtgtagccactttccgtaaatacacatgactcgnggaaaaaacgc 450
            || || ||||||| | | |  |||||||||||||||||  ||||| |||||
Sbjct: 2716 tccttcgtgtagctagtgtttgtaaatacacatgactcccggaaataacgc 2666



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 20   tagctctgccaccaaaattcttgatcctatgaaa 53
            |||||||  ||||||||||||| |||||||||||
Sbjct: 3284 tagctctaacaccaaaattcttaatcctatgaaa 3251
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>dbj|AK102504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095E13, full
            insert sequence
          Length = 2366

 Score =  113 bits (57), Expect = 5e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 284  aggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacct 343
            ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 2006 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactggaaaacct 1947

                                                                        
Query: 344  gcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcagatctt 403
            | ||||| ||||||| |||  |||| ||||| ||||||||||||| ||  |||||||| |
Sbjct: 1946 gtggagtattgtcaactattacaacttttgccaggtcaactccaagaattgtcagatcct 1887

                     
Query: 404  ttgtgtagc 412
            |||| ||||
Sbjct: 1886 ttgtatagc 1878
to top
>dbj|AK063853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D02, full
           insert sequence
          Length = 514

 Score =  113 bits (57), Expect = 5e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                       
Query: 284 aggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacct 343
           ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 150 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactggaaaacct 91

                                                                       
Query: 344 gcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcagatctt 403
           | ||||| ||||||| |||  |||| ||||| ||||||||||||| ||  |||||||| |
Sbjct: 90  gtggagtattgtcaactattacaacttttgccaggtcaactccaagaattgtcagatcct 31

                    
Query: 404 ttgtgtagc 412
           |||| ||||
Sbjct: 30  ttgtatagc 22
to top
>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0688A04
          Length = 143969

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                          
Query: 284    aggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacct 343
              ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 133475 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactggaaaacct 133416

               
Query: 344    g 344
              |
Sbjct: 133415 g 133415



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                          
Query: 340    acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 399
              ||||| ||||| ||||||| |||  |||| ||||| ||||||||||||| ||  ||||||
Sbjct: 133141 acctgtggagtattgtcaactattacaacttttgccaggtcaactccaagaattgtcaga 133082

                           
Query: 400    tcttttgtgtagc 412
              || ||||| ||||
Sbjct: 133081 tcctttgtatagc 133069
to top
>gb|AC144656.12| Medicago truncatula clone mth2-27d4, complete sequence
          Length = 102057

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 296   accagctctctatgggtataccattattcacttgcaactggaaaacctg 344
             |||| |||| |||||| ||||||||||||||||||||  ||||||||||
Sbjct: 76735 accaactctttatggggataccattattcacttgcaaacggaaaacctg 76783
to top
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382,
             complete sequence
          Length = 99748

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 296   accagctctctatgggtataccattattcacttgcaactggaaaacctg 344
             |||| |||| |||||| ||||||||||||||||||||  ||||||||||
Sbjct: 88352 accaactctttatgggaataccattattcacttgcaaacggaaaacctg 88400
to top
>ref|NM_192920.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 975

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 284 aggggtcattataccagctctctatgggtataccattattcacttgcaactg 335
           ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||
Sbjct: 865 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactg 814
to top
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
             complete sequence
          Length = 204649

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 217   ggtcggacgtcatcagcaacagcaa 241
             |||||||||||||| ||||||||||
Sbjct: 41355 ggtcggacgtcatctgcaacagcaa 41331
to top
>ref|NM_018416.2| Homo sapiens forkhead box J2 (FOXJ2), mRNA
          Length = 5499

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 195  gccaaacctcttggcaattatgggt 219
            |||||||||||||| ||||||||||
Sbjct: 4433 gccaaacctcttggaaattatgggt 4409
to top
>gb|AC128715.5| Homo sapiens 3 BAC RP11-727B20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 100845

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    atgtaaataaaattaagaaaa 77
             |||||||||||||||||||||
Sbjct: 12550 atgtaaataaaattaagaaaa 12570
to top
>gb|AC116442.3| Homo sapiens chromosome 3 clone RP11-534H12, complete sequence
          Length = 175610

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    atgtaaataaaattaagaaaa 77
             |||||||||||||||||||||
Sbjct: 91890 atgtaaataaaattaagaaaa 91910
to top
>emb|AL049747.1|HS62D4 Human DNA sequence from clone CITF22-62D4 on chromosome 22, complete
             sequence
          Length = 40665

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    taaataaaattaagaaaaagg 80
             |||||||||||||||||||||
Sbjct: 15854 taaataaaattaagaaaaagg 15874
to top
>emb|AL161978.1|HSM802572 Homo sapiens mRNA; cDNA DKFZp762A1712 (from clone DKFZp762A1712)
          Length = 3019

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 195  gccaaacctcttggcaattatgggt 219
            |||||||||||||| ||||||||||
Sbjct: 1976 gccaaacctcttggaaattatgggt 1952
to top
>emb|AL596204.8| Mouse DNA sequence from clone RP23-180B18 on chromosome 11 Contains the
             Flcn gene for folliculin, the gene for a novel
             Phospholipase D Active site motif-containing protein, two
             novel genes, the gene for Rho interacting protein 3
             (Rhoip3), the gene (possible pseudogene) for a novel
             protein similar to olfactory receptor proteins and two CpG
             islands, complete sequence
          Length = 205606

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 253   aatggaatcagctgagataat 273
             |||||||||||||||||||||
Sbjct: 90120 aatggaatcagctgagataat 90140
to top
>dbj|AK092529.1| Homo sapiens cDNA FLJ35210 fis, clone PROST1000085
          Length = 2402

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 195  gccaaacctcttggcaattatgggt 219
            |||||||||||||| ||||||||||
Sbjct: 1374 gccaaacctcttggaaattatgggt 1350
to top
>dbj|AK085445.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
            library, clone:D630027A16 product:unclassifiable, full
            insert sequence
          Length = 1626

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 253  aatggaatcagctgagataat 273
            |||||||||||||||||||||
Sbjct: 1325 aatggaatcagctgagataat 1305
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 217      ggtcggacgtcatcagcaacagcaa 241
                |||||||||||||| ||||||||||
Sbjct: 27961190 ggtcggacgtcatctgcaacagcaa 27961166
to top
>gb|AC084020.17|AC084020 Mus musculus 11 BAC RP23-301I12 (Roswell Park Cancer Institute Mouse
             BAC Library) complete sequence
          Length = 147670

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 253   aatggaatcagctgagataat 273
             |||||||||||||||||||||
Sbjct: 87212 aatggaatcagctgagataat 87192
to top
>gb|AC006511.5| Homo sapiens 12 BAC RPCI11-69M1 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 186321

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 195   gccaaacctcttggcaattatgggt 219
             |||||||||||||| ||||||||||
Sbjct: 75946 gccaaacctcttggaaattatgggt 75970
to top
>gb|AF155132.1|AF155132 Homo sapiens FOXJ2 forkhead factor mRNA, complete cds
          Length = 4873

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 195  gccaaacctcttggcaattatgggt 219
            |||||||||||||| ||||||||||
Sbjct: 3838 gccaaacctcttggaaattatgggt 3814
to top
>dbj|AK099836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106J19, full
            insert sequence
          Length = 1584

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 217  ggtcggacgtcatcagcaacagcaa 241
            |||||||||||||| ||||||||||
Sbjct: 1283 ggtcggacgtcatctgcaacagcaa 1259



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                        
Query: 301  ctctctatgggtataccattattcacttgcaactggaaaacctgcggagtgttgtcaatt 360
            |||||||| ||||||||||| | | | || | | |||||||||  ||||  ||||| |||
Sbjct: 1199 ctctctataggtataccattttcctcctgtagccggaaaacctctggagaattgtcgatt 1140

                                                     
Query: 361  atggcaacctttgcaaggtcaactccaataacagtcagatc 401
            ||  |||||||||| || ||| |  ||||||||||||||||
Sbjct: 1139 atcacaacctttgcgagatcagcaacaataacagtcagatc 1099
to top
>gb|AF038177.1|AF038177 Homo sapiens clone 23899 mRNA sequence
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 195 gccaaacctcttggcaattatgggt 219
           |||||||||||||| ||||||||||
Sbjct: 77  gccaaacctcttggaaattatgggt 53
to top
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     gtaaataaaattaagaaaaa 78
              ||||||||||||||||||||
Sbjct: 539852 gtaaataaaattaagaaaaa 539833
to top
>gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chromosome 2, complete
              sequence
          Length = 139973

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     taaataaaattaagaaaaag 79
              ||||||||||||||||||||
Sbjct: 135003 taaataaaattaagaaaaag 135022
to top
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X
          Length = 652898

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     ccatgtaaataaaattaagaaaaa 78
              ||||| ||||||||||||||||||
Sbjct: 578907 ccatgaaaataaaattaagaaaaa 578930
to top
>gb|AC140251.2| Mus musculus BAC clone RP24-289C19 from chromosome 12, complete sequence
          Length = 177652

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    gtgtcatgtaagttcttgtc 124
              ||||||||||||||||||||
Sbjct: 102292 gtgtcatgtaagttcttgtc 102311
to top
>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete
             sequence
          Length = 192494

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    taaataaaattaagaaaaag 79
             ||||||||||||||||||||
Sbjct: 88967 taaataaaattaagaaaaag 88948
to top
>ref|XM_726292.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03383)
            partial mRNA
          Length = 2790

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   taaataaaattaagaaaaag 79
            ||||||||||||||||||||
Sbjct: 2669 taaataaaattaagaaaaag 2688
to top
>emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in linkage group 14,
             complete sequence
          Length = 168298

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    tcctatgaaacccatgtaaataaa 67
             |||||| |||||||||||||||||
Sbjct: 73685 tcctattaaacccatgtaaataaa 73662
to top
>emb|BX546442.2| Human DNA sequence from clone WI2-8829E4 on chromosome X, complete
             sequence
          Length = 43157

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    ccatgtaaataaaattaagaaaaa 78
             ||||| ||||||||||||||||||
Sbjct: 27001 ccatgaaaataaaattaagaaaaa 27024
to top
>emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on chromosome 1, complete
             sequence
          Length = 113420

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   aagtgtctccaggaatggaa 259
             ||||||||||||||||||||
Sbjct: 34363 aagtgtctccaggaatggaa 34344
to top
>emb|AL049589.15|HSJ570L12 Human DNA sequence from clone RP4-570L12 on chromosome Xq13.1-21.1
              Contains the PGK1 gene for phosphoglycerate kinase 1, the
              TAF9L gene for TAF9-like RNA polymerase II TATA box binding
              protein (TBP)-associated factor 31kDa, a novel pseudogene
              and a CpG island, complete sequence
          Length = 143508

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     aaataaaattaagaaaaagg 80
              ||||||||||||||||||||
Sbjct: 112555 aaataaaattaagaaaaagg 112574
to top
>gb|AC158212.3| Mus musculus chromosome 7, clone RP24-288P9, complete sequence
          Length = 161314

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    taaataaaattaagaaaaag 79
             ||||||||||||||||||||
Sbjct: 15047 taaataaaattaagaaaaag 15028
to top
>gb|AC160535.3| Mus musculus chromosome 7, clone RP24-298A23, complete sequence
          Length = 163688

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    taaataaaattaagaaaaag 79
             ||||||||||||||||||||
Sbjct: 26466 taaataaaattaagaaaaag 26485
to top
>emb|CR382323.8| Zebrafish DNA sequence from clone DKEY-226M8 in linkage group 5,
             complete sequence
          Length = 143411

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    taaataaaattaagaaaaag 79
             ||||||||||||||||||||
Sbjct: 30071 taaataaaattaagaaaaag 30090
to top
>emb|BX927184.5| Zebrafish DNA sequence from clone DKEY-125I20 in linkage group 5,
            complete sequence
          Length = 160345

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   taaataaaattaagaaaaag 79
            ||||||||||||||||||||
Sbjct: 9337 taaataaaattaagaaaaag 9318
to top
>emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, complete sequence
          Length = 84546

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ttttagttgccaaacctctt 206
             ||||||||||||||||||||
Sbjct: 61898 ttttagttgccaaacctctt 61879
to top
>emb|BX530022.5| Zebrafish DNA sequence from clone DKEY-29A22 in linkage group 21,
              complete sequence
          Length = 139415

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     taaataaaattaagaaaaag 79
              ||||||||||||||||||||
Sbjct: 133931 taaataaaattaagaaaaag 133950
to top
>gb|AY525405.1| Methylophilus methylotrophus methylene tetrahydromethanopterin
           dehydrogenase (mtdB) gene, partial cds
          Length = 644

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  tgccaccaaaattcttgatc 45
           ||||||||||||||||||||
Sbjct: 313 tgccaccaaaattcttgatc 294
to top
>emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in linkage group 3,
              complete sequence
          Length = 244555

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ttttagttgccaaacctctt 206
              ||||||||||||||||||||
Sbjct: 206014 ttttagttgccaaacctctt 205995
to top
>gb|AC024566.5|AC024566 Homo sapiens chromosome 5 clone CTD-2135M18, complete sequence
          Length = 145957

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    tgtaaataaaattaagaaaa 77
             ||||||||||||||||||||
Sbjct: 74255 tgtaaataaaattaagaaaa 74236
to top
>gb|AC111051.26| Mus musculus chromosome 7, clone RP24-163C20, complete sequence
          Length = 166456

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    taaataaaattaagaaaaag 79
             ||||||||||||||||||||
Sbjct: 82581 taaataaaattaagaaaaag 82600
to top
>gb|AC103563.5| Homo sapiens BAC clone RP11-708D7 from 2, complete sequence
          Length = 131132

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    taaataaaattaagaaaaag 79
             ||||||||||||||||||||
Sbjct: 10747 taaataaaattaagaaaaag 10766
to top
>gb|AF010238.1|AF010238 Homo sapiens von Hippel-Lindau tumor suppressor (VHL) gene, complete
            cds
          Length = 14543

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   gatcctatgaaacccatgta 61
            ||||||||||||||||||||
Sbjct: 7029 gatcctatgaaacccatgta 7010
to top
>dbj|BS000082.1| Pan troglodytes chromosome 22 clone:RP43-097H18, map 22, complete
             sequences
          Length = 176268

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    gaaacccatgtaaataaaattaag 73
             |||||||||||||||| |||||||
Sbjct: 90123 gaaacccatgtaaatataattaag 90146
to top
>gb|AC105957.13| Mus musculus chromosome 18, clone RP24-303O20, complete sequence
          Length = 167570

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   tccttttagttgccaaacct 203
             ||||||||||||||||||||
Sbjct: 23464 tccttttagttgccaaacct 23483
to top
>dbj|AP001685.1| Homo sapiens genomic DNA, chromosome 21q, section 29/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     gaaacccatgtaaataaaattaag 73
              |||||||||||||||| |||||||
Sbjct: 230398 gaaacccatgtaaatataattaag 230421
to top
>emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 map Xq28, complete
              sequence
          Length = 205943

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     aaataaaattaagaaaaagg 80
              ||||||||||||||||||||
Sbjct: 187567 aaataaaattaagaaaaagg 187586
to top
>emb|AL954175.6| Zebrafish DNA sequence from clone CH211-201N5, complete sequence
          Length = 176268

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    tcctatgaaacccatgtaaataaa 67
             |||||| |||||||||||||||||
Sbjct: 33434 tcctattaaacccatgtaaataaa 33411
to top
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     agcaacagcaagtgtctcca 250
               ||||||||||||||||||||
Sbjct: 2493591 agcaacagcaagtgtctcca 2493610
to top
>dbj|AP000966.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B876D15,
             LL56-APP region, complete sequence
          Length = 156234

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    gaaacccatgtaaataaaattaag 73
             |||||||||||||||| |||||||
Sbjct: 94770 gaaacccatgtaaatataattaag 94793


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,614,907
Number of Sequences: 3902068
Number of extensions: 4614907
Number of successful extensions: 120225
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119987
Number of HSP's gapped (non-prelim): 231
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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