>YD17_SCHPO (Q10240) Hypothetical UPF0300 protein C4G9.07 in chromosome I|
          Length = 513

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -2

Query: 239 REYQQVLENRMKCTYIQWHHLLLYHFFSIFRQSSSYAAI*AYL 111
           +E  ++L N      +  HH++LYH++  F QS+ + A+ +YL
Sbjct: 232 KELSEMLTNNNAPLEVLIHHVMLYHYYPSFLQSALWTAVSSYL 274

>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 2)
            (RAT brain class D) (RBD)
          Length = 2203

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 352  STYNFHNLILSNSKDEIKPPSSVPHQLILP 441
            S++NF  L   NS+D++ P  ++PH+  LP
Sbjct: 1963 SSFNFECLRRQNSQDDVLPSPALPHRAALP 1992

>UL07_HHV6U (P52456) Protein U75|
          Length = 249

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = +3

Query: 183 MPLYVSTLHPVF*NLLVFPSNYPLTELMFDS 275
           +PL  STLH +   L++FP+  P+T+++F++
Sbjct: 128 LPLKQSTLHKLIAKLVLFPALSPITKILFNT 158

>UL07_HHV6Z (P52457) Protein U75|
          Length = 249

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 183 MPLYVSTLHPVF*NLLVFPSNYPLTELMFDS 275
           +PL  STLH +   L++FP   P+T+++F++
Sbjct: 128 LPLKQSTLHKLIARLVLFPVLSPVTKILFNT 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,002,001
Number of Sequences: 219361
Number of extensions: 1570559
Number of successful extensions: 3169
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3169
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)