ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32m18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY588275.1| Zea mays putative inosine-uridine preferring nucl... 270 6e-69
2ref|XM_483754.1| Oryza sativa (japonica cultivar-group), mRNA 218 2e-53
3dbj|AK065324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 2e-53
4gb|AY109712.1| Zea mays CL31621_2 mRNA sequence 184 3e-43
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 151 4e-33
6dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 151 4e-33
7dbj|AK061415.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 3e-15
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
9dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
10dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
11emb|CR759947.5| Gorilla DNA sequence from clone CH255-315F17, co... 46 0.15
12gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, co... 46 0.15
13emb|X07277.1|GGNCAD Chicken mRNA for N-cadherin 44 0.59
14gb|AC012365.6| Homo sapiens BAC clone RP11-459C22 from 2, comple... 44 0.59
15gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosom... 44 0.59
16ref|NM_001001615.1| Gallus gallus cadherin 2, type 1, N-cadherin... 44 0.59
17ref|XM_713002.1| Candida albicans SC5314 putative ABC family tra... 42 2.3
18ref|XM_712936.1| Candida albicans SC5314 putative ABC family tra... 42 2.3
19gb|AC133330.3| Homo sapiens chromosome 8 clone RP11-134N2, compl... 42 2.3
20gb|AC172242.3| Gallus gallus BAC clone CH261-162M6 from chromoso... 42 2.3
21gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome... 42 2.3
22gb|AC091660.2| Bos taurus clone RP42-354B6, complete sequence 42 2.3
23emb|AL513320.30| Human DNA sequence from clone RP11-46F15 on chr... 42 2.3
24emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chr... 42 2.3
25gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome... 42 2.3
26gb|AC090505.10| Homo sapiens 3 BAC RP11-152D21 (Roswell Park Can... 42 2.3
27gb|AC021305.9| Homo sapiens chromosome 8, clone RP11-140B16, com... 42 2.3
28gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, comple... 42 2.3
29gb|AC079248.5| Homo sapiens BAC clone RP11-24J11 from 2, complet... 42 2.3
30gb|AF267168.3| Homo sapiens chromosome 8 clone RP11-134N2, compl... 42 2.3
31gb|AF254981.4| Homo sapiens chromosome 8 clone RP11-429D14 map 8... 42 2.3
32gb|AY106135.1| Zea mays PCO154542 mRNA sequence 42 2.3
33emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chr... 42 2.3
34gb|AC137117.15| Mus musculus chromosome 15, clone RP23-242E20, c... 40 9.3
35gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 9.3
36ref|XM_640143.1| Dictyostelium discoideum hypothetical protein (... 40 9.3
37gb|AC095018.2| Drosophila melanogaster clone BACR24L18, complete... 40 9.3
38ref|XM_426559.1| PREDICTED: Gallus gallus similar to transmembra... 40 9.3
39gb|AC183274.3| Pan troglodytes BAC clone CH251-156F5 from chromo... 40 9.3
40gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875... 40 9.3
41gb|AC134906.3| Mus musculus BAC clone RP23-361K7 from chromosome... 40 9.3
42gb|AC121940.3| Mus musculus BAC clone RP24-209B21 from chromosom... 40 9.3
43gb|AY194049.1| HIV-1 isolate UGANC1 from Uganda nonfunctional ta... 40 9.3
44gb|AY194048.1| HIV-1 isolate UG3 from Uganda nonfunctional tat p... 40 9.3
45gb|AY194034.1| HIV-1 isolate UGMED2 from Uganda tat protein (tat... 40 9.3
46gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, comp... 40 9.3
47emb|AL359257.9| Human DNA sequence from clone RP11-226E21 on chr... 40 9.3
48emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on ch... 40 9.3
49gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 9.3
50emb|BX510945.13| Zebrafish DNA sequence from clone CH211-59D17 i... 40 9.3
51gb|AC036111.7| Homo sapiens chromosome 2, clone RP11-738O11, com... 40 9.3
52gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswel... 40 9.3
53gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, com... 40 9.3
54emb|BX510315.6| Zebrafish DNA sequence from clone CH211-59I18 in... 40 9.3
55gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswel... 40 9.3
56gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, com... 40 9.3
57gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence 40 9.3
58gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3... 40 9.3
59gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromo... 40 9.3
60gb|AC048341.22| Homo sapiens 12 BAC RP11-631N16 (Roswell Park Ca... 40 9.3
61gb|AC091636.1|AC091636 Drosophila melanogaster, chromosome 3R, r... 40 9.3
62gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, r... 40 9.3
63gb|AC009501.4| Homo sapiens BAC clone RP11-511I11 from 2, comple... 40 9.3
64gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, comple... 40 9.3
65emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on ch... 40 9.3
66gb|BC094158.1| Xenopus laevis cDNA clone MGC:115288 IMAGE:686110... 40 9.3
67gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 9.3
68gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Canc... 40 9.3
69emb|BX510368.7| Zebrafish DNA sequence from clone DKEY-190P19 in... 40 9.3
70emb|AL954739.9| Zebrafish DNA sequence from clone CH211-192K9 in... 40 9.3
71emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in ... 40 9.3
72gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69... 40 9.3
73gb|AE003715.4| Drosophila melanogaster chromosome 3R, section 53... 40 9.3
74gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77... 40 9.3
75gb|AC148246.3| Saimiri boliviensis boliviensis clone CH254-471K1... 40 9.3
76emb|AL929382.9| Mouse DNA sequence from clone RP23-136C24 on chr... 40 9.3
77gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (B... 40 9.3
78gb|L07835.1|DROABDB Drosophila melanogaster (clone DS07696) Abd-... 40 9.3

>gb|AY588275.1| Zea mays putative inosine-uridine preferring nucleoside hydrolase
            mRNA, complete cds
          Length = 1458

 Score =  270 bits (136), Expect = 6e-69
 Identities = 241/276 (87%)
 Strand = Plus / Minus

                                                                        
Query: 404  ctcagggtgccatcagcagcttctttacatatgcaaggacctttggcacattgactgtcc 463
            |||| |||||||| ||||||||||||| | |    | ||||||||||||||  || ||||
Sbjct: 1147 ctcatggtgccatgagcagcttctttataaagctgatgacctttggcacatcaaccgtcc 1088

                                                                        
Query: 464  atgcaactgaaattggtgcataacccgaccatggattttctgaattccactttttcaatc 523
            ||||||||||||| |||  ||| || |||||||| || ||||||||||||||||||||||
Sbjct: 1087 atgcaactgaaatcggtttataccctgaccatgggttctctgaattccactttttcaatc 1028

                                                                        
Query: 524  catgatccatcaaagtatggccggtgcaaatgccctgggtctcgactctcacaacaccct 583
            | |||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 1027 cctgatccatcaaagtgtggccagtgcaaatgccctgggtctctactctcaccacaccct 968

                                                                        
Query: 584  tcttgaatgtgaagtactcgggatgaactaaggctgtaaagctcacaggatcatgtagga 643
            ||||||||||||||||||| ||||||| || ||| || ||||||||||||||||| ||||
Sbjct: 967  tcttgaatgtgaagtactctggatgaagtacggcagtgaagctcacaggatcatgaagga 908

                                                
Query: 644  aaatcccatgaaagctgtcagacttcgcatgccaat 679
            |||| |||||||| |  |||||||| ||||||||||
Sbjct: 907  aaattccatgaaaaccatcagacttggcatgccaat 872



to top

>ref|XM_483754.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1516

 Score =  218 bits (110), Expect = 2e-53
 Identities = 188/214 (87%)
 Strand = Plus / Minus

                                                                        
Query: 445  tttggcacattgactgtccatgcaactgaaattggtgcataacccgaccatggattttct 504
            ||||||||||  ||||||||||||||||| |||||    || || ||||||||||| |||
Sbjct: 1071 tttggcacatcaactgtccatgcaactgagattggcttgtagccagaccatggattctct 1012

                                                                        
Query: 505  gaattccactttttcaatccatgatccatcaaagtatggccggtgcaaatgccctgggtc 564
            |||||||||||||||||||| || ||||| ||||| || || ||||||||||||||||| 
Sbjct: 1011 gaattccactttttcaatccttggtccattaaagtgtgaccagtgcaaatgccctgggtt 952

                                                                        
Query: 565  tcgactctcacaacacccttcttgaatgtgaagtactcgggatgaactaaggctgtaaag 624
            || ||||||||||||||||||||||| ||||||||||| || ||||||| ||| || |||
Sbjct: 951  tctactctcacaacacccttcttgaacgtgaagtactcagggtgaactagggcagtgaag 892

                                              
Query: 625  ctcacaggatcatgtaggaaaatcccatgaaagc 658
            |||||||||||||| |||||||| ||||||||||
Sbjct: 891  ctcacaggatcatggaggaaaattccatgaaagc 858



to top

>dbj|AK065324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P23, full
            insert sequence
          Length = 1517

 Score =  218 bits (110), Expect = 2e-53
 Identities = 188/214 (87%)
 Strand = Plus / Minus

                                                                        
Query: 445  tttggcacattgactgtccatgcaactgaaattggtgcataacccgaccatggattttct 504
            ||||||||||  ||||||||||||||||| |||||    || || ||||||||||| |||
Sbjct: 1072 tttggcacatcaactgtccatgcaactgagattggcttgtagccagaccatggattctct 1013

                                                                        
Query: 505  gaattccactttttcaatccatgatccatcaaagtatggccggtgcaaatgccctgggtc 564
            |||||||||||||||||||| || ||||| ||||| || || ||||||||||||||||| 
Sbjct: 1012 gaattccactttttcaatccttggtccattaaagtgtgaccagtgcaaatgccctgggtt 953

                                                                        
Query: 565  tcgactctcacaacacccttcttgaatgtgaagtactcgggatgaactaaggctgtaaag 624
            || ||||||||||||||||||||||| ||||||||||| || ||||||| ||| || |||
Sbjct: 952  tctactctcacaacacccttcttgaacgtgaagtactcagggtgaactagggcagtgaag 893

                                              
Query: 625  ctcacaggatcatgtaggaaaatcccatgaaagc 658
            |||||||||||||| |||||||| ||||||||||
Sbjct: 892  ctcacaggatcatggaggaaaattccatgaaagc 859



to top

>gb|AY109712.1| Zea mays CL31621_2 mRNA sequence
          Length = 877

 Score =  184 bits (93), Expect = 3e-43
 Identities = 144/161 (89%)
 Strand = Plus / Plus

                                                                       
Query: 519 caatccatgatccatcaaagtatggccggtgcaaatgccctgggtctcgactctcacaac 578
           |||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||| ||
Sbjct: 644 caatccctgatccatcaaagtgtggccagtgcaaatgccctgggtctctaccctcaccac 703

                                                                       
Query: 579 acccttcttgaatgtgaagtactcgggatgaactaaggctgtaaagctcacaggatcatg 638
           |||||||||||||||||||||||| ||||||| || ||| || |||||||||||||||||
Sbjct: 704 acccttcttgaatgtgaagtactctggatgaagtacggcagtgaagctcacaggatcatg 763

                                                    
Query: 639 taggaaaatcccatgaaagctgtcagacttcgcatgccaat 679
            |||||||| |||||||| |  |||||||| ||||||||||
Sbjct: 764 aaggaaaattccatgaaaaccatcagacttggcatgccaat 804



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 90/110 (81%)
 Strand = Plus / Plus

                                                                       
Query: 404 ctcagggtgccatcagcagcttctttacatatgcaaggacctttggcacattgactgtcc 463
           |||| |||||||| ||||||||||||| | |    | |||||||| |||||  || ||||
Sbjct: 313 ctcatggtgccataagcagcttctttataaagctgatgacctttgccacatcaaccgtcc 372

                                                             
Query: 464 atgcaactgaaattggtgcataacccgaccatggattttctgaattccac 513
           ||||||||||||| |||  ||| || |||||||| || ||||||||||||
Sbjct: 373 atgcaactgaaatcggtttataccctgaccatgggttctctgaattccac 422



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  151 bits (76), Expect = 4e-33
 Identities = 121/136 (88%)
 Strand = Plus / Plus

                                                                            
Query: 512      actttttcaatccatgatccatcaaagtatggccggtgcaaatgccctgggtctcgactc 571
                ||||||||||||| || ||||| ||||| || || ||||||||||||||||| || ||||
Sbjct: 27916254 actttttcaatccttggtccattaaagtgtgaccagtgcaaatgccctgggtttctactc 27916313

                                                                            
Query: 572      tcacaacacccttcttgaatgtgaagtactcgggatgaactaaggctgtaaagctcacag 631
                ||||||||||||||||||| ||||||||||| || ||||||| ||| || ||||||||||
Sbjct: 27916314 tcacaacacccttcttgaacgtgaagtactcagggtgaactagggcagtgaagctcacag 27916373

                                
Query: 632      gatcatgtaggaaaat 647
                ||||||| ||||||||
Sbjct: 27916374 gatcatggaggaaaat 27916389



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                            
Query: 445      tttggcacattgactgtccatgcaactgaaattggtgcataacccgaccatggattttct 504
                ||||||||||  ||||||||||||||||| |||||    || || ||||||||||| |||
Sbjct: 27916050 tttggcacatcaactgtccatgcaactgagattggcttgtagccagaccatggattctct 27916109

                         
Query: 505      gaattccac 513
                |||||||||
Sbjct: 27916110 gaattccac 27916118



to top

>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1150_A11
          Length = 142010

 Score =  151 bits (76), Expect = 4e-33
 Identities = 121/136 (88%)
 Strand = Plus / Plus

                                                                          
Query: 512    actttttcaatccatgatccatcaaagtatggccggtgcaaatgccctgggtctcgactc 571
              ||||||||||||| || ||||| ||||| || || ||||||||||||||||| || ||||
Sbjct: 124332 actttttcaatccttggtccattaaagtgtgaccagtgcaaatgccctgggtttctactc 124391

                                                                          
Query: 572    tcacaacacccttcttgaatgtgaagtactcgggatgaactaaggctgtaaagctcacag 631
              ||||||||||||||||||| ||||||||||| || ||||||| ||| || ||||||||||
Sbjct: 124392 tcacaacacccttcttgaacgtgaagtactcagggtgaactagggcagtgaagctcacag 124451

                              
Query: 632    gatcatgtaggaaaat 647
              ||||||| ||||||||
Sbjct: 124452 gatcatggaggaaaat 124467



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                          
Query: 445    tttggcacattgactgtccatgcaactgaaattggtgcataacccgaccatggattttct 504
              ||||||||||  ||||||||||||||||| |||||    || || ||||||||||| |||
Sbjct: 124128 tttggcacatcaactgtccatgcaactgagattggcttgtagccagaccatggattctct 124187

                       
Query: 505    gaattccac 513
              |||||||||
Sbjct: 124188 gaattccac 124196



to top

>dbj|AK061415.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D09, full
            insert sequence
          Length = 1329

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 117/138 (84%), Gaps = 2/138 (1%)
 Strand = Plus / Minus

                                                                        
Query: 502  tctgaattccactttttcaatcc-atgatccatcaaagtatggccggtgcaaatgccctg 560
            |||||||||||||| |||| ||| ||| |||||  ||||||| ||  |||| ||||||||
Sbjct: 1002 tctgaattccacttcttcagtcccatg-tccatggaagtatgccccttgcagatgccctg 944

                                                                        
Query: 561  ggtctcgactctcacaacacccttcttgaatgtgaagtactcgggatgaactaaggctgt 620
            |||||| || ||||| || ||||||||||| |||||||||||||| |||||||  || ||
Sbjct: 943  ggtctcaaccctcaccacgcccttcttgaacgtgaagtactcggggtgaactagcgcggt 884

                              
Query: 621  aaagctcacaggatcatg 638
             || ||||||||||||||
Sbjct: 883  gaaactcacaggatcatg 866



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                            
Query: 548      tgcaaatgccctgggtctcgactctcacaacacccttcttgaatgtgaagtactcgggat 607
                |||| |||||||||||||| || ||||| || ||||||||||| |||||||||||||| |
Sbjct: 22376643 tgcagatgccctgggtctcaaccctcaccacgcccttcttgaacgtgaagtactcggggt 22376702

                                               
Query: 608      gaactaaggctgtaaagctcacaggatcatg 638
                ||||||  || || || ||||||||||||||
Sbjct: 22376703 gaactagcgcggtgaaactcacaggatcatg 22376733



to top

>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1155_H10
          Length = 140475

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                          
Query: 548    tgcaaatgccctgggtctcgactctcacaacacccttcttgaatgtgaagtactcgggat 607
              |||| |||||||||||||| || ||||| || ||||||||||| |||||||||||||| |
Sbjct: 138651 tgcagatgccctgggtctcaaccctcaccacgcccttcttgaacgtgaagtactcggggt 138710

                                             
Query: 608    gaactaaggctgtaaagctcacaggatcatg 638
              ||||||  || || || ||||||||||||||
Sbjct: 138711 gaactagcgcggtgaaactcacaggatcatg 138741



to top

>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1003_C09
          Length = 124746

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                         
Query: 548   tgcaaatgccctgggtctcgactctcacaacacccttcttgaatgtgaagtactcgggat 607
             |||| |||||||||||||| || ||||| || ||||||||||| |||||||||||||| |
Sbjct: 13132 tgcagatgccctgggtctcaaccctcaccacgcccttcttgaacgtgaagtactcggggt 13191

                                            
Query: 608   gaactaaggctgtaaagctcacaggatcatg 638
             ||||||  || || || ||||||||||||||
Sbjct: 13192 gaactagcgcggtgaaactcacaggatcatg 13222



to top

>emb|CR759947.5| Gorilla DNA sequence from clone CH255-315F17, complete sequence
          Length = 97153

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 494   atggattttctgaattccactttttca 520
             ||||| |||||||||||||||||||||
Sbjct: 39828 atggactttctgaattccactttttca 39802



to top

>gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, complete sequence
          Length = 200070

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 494    atggattttctgaattccactttttca 520
              ||||| |||||||||||||||||||||
Sbjct: 144209 atggactttctgaattccactttttca 144183



to top

>emb|X07277.1|GGNCAD Chicken mRNA for N-cadherin
          Length = 3203

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 316 aaaacagaaaaatatactttgg 337
           ||||||||||||||||||||||
Sbjct: 243 aaaacagaaaaatatactttgg 264



to top

>gb|AC012365.6| Homo sapiens BAC clone RP11-459C22 from 2, complete sequence
          Length = 187848

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 193    atgtagttgtatatataaatgt 214
              ||||||||||||||||||||||
Sbjct: 117162 atgtagttgtatatataaatgt 117183



to top

>gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosome ul, complete sequence
          Length = 233533

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 316    aaaacagaaaaatatactttgg 337
              ||||||||||||||||||||||
Sbjct: 175808 aaaacagaaaaatatactttgg 175787



to top

>ref|NM_001001615.1| Gallus gallus cadherin 2, type 1, N-cadherin (neuronal) (CDH2),
           mRNA
          Length = 3203

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 316 aaaacagaaaaatatactttgg 337
           ||||||||||||||||||||||
Sbjct: 243 aaaacagaaaaatatactttgg 264



to top

>ref|XM_713002.1| Candida albicans SC5314 putative ABC family transporter (CaO19_5759),
            mRNA
          Length = 4488

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 535  aaagtatggccggtgcaaatgccctgggt 563
            ||||||| ||||||||||||||| |||||
Sbjct: 1913 aaagtattgccggtgcaaatgccatgggt 1941



to top

>ref|XM_712936.1| Candida albicans SC5314 putative ABC family transporter
            (CaO19_13182), mRNA
          Length = 4488

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 535  aaagtatggccggtgcaaatgccctgggt 563
            ||||||| ||||||||||||||| |||||
Sbjct: 1913 aaagtattgccggtgcaaatgccatgggt 1941



to top

>gb|AC133330.3| Homo sapiens chromosome 8 clone RP11-134N2, complete sequence
          Length = 164916

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 633    atcatgtaggaaaatcccatgaaag 657
              ||||||||||| |||||||||||||
Sbjct: 119035 atcatgtaggagaatcccatgaaag 119011



to top

>gb|AC172242.3| Gallus gallus BAC clone CH261-162M6 from chromosome ul, complete sequence
          Length = 252782

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 498    attttctgaattccacttttt 518
              |||||||||||||||||||||
Sbjct: 191830 attttctgaattccacttttt 191810



to top

>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete sequence
          Length = 193610

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 176    ttttttccaaatttgaaatgt 196
              |||||||||||||||||||||
Sbjct: 149918 ttttttccaaatttgaaatgt 149898



to top

>gb|AC091660.2| Bos taurus clone RP42-354B6, complete sequence
          Length = 173068

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    tttttccaaatttgaaatgta 197
              |||||||||||||||||||||
Sbjct: 136262 tttttccaaatttgaaatgta 136242



to top

>emb|AL513320.30| Human DNA sequence from clone RP11-46F15 on chromosome 1 Contains the
             5' end of the EGFL3 gene for EGF-like-domain multiple 3, a
             novel gene, the gene for a novel protein (FLJ39108,
             FLJ21756 and FLJ21811), the 3' end of the WDR8 gene for WD
             repeat domain 8 and five CpG islands, complete sequence
          Length = 130141

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 493   catggattttctgaattccactttt 517
             |||||||| ||||||||||||||||
Sbjct: 88235 catggattctctgaattccactttt 88211



to top

>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete
              sequence
          Length = 160587

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 619    gtaaagctcacaggatcatgt 639
              |||||||||||||||||||||
Sbjct: 156332 gtaaagctcacaggatcatgt 156352



to top

>gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome 12, complete sequence
          Length = 201524

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 176   ttttttccaaatttgaaatgt 196
             |||||||||||||||||||||
Sbjct: 45112 ttttttccaaatttgaaatgt 45092



to top

>gb|AC090505.10| Homo sapiens 3 BAC RP11-152D21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86560

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 178   ttttccaaatttgaaatgtag 198
             |||||||||||||||||||||
Sbjct: 80762 ttttccaaatttgaaatgtag 80742



to top

>gb|AC021305.9| Homo sapiens chromosome 8, clone RP11-140B16, complete sequence
          Length = 164916

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 633    atcatgtaggaaaatcccatgaaag 657
              ||||||||||| |||||||||||||
Sbjct: 119035 atcatgtaggagaatcccatgaaag 119011



to top

>gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, complete sequence
          Length = 163408

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 306    cttgcttctaaaaacagaaaa 326
              |||||||||||||||||||||
Sbjct: 137100 cttgcttctaaaaacagaaaa 137120



to top

>gb|AC079248.5| Homo sapiens BAC clone RP11-24J11 from 2, complete sequence
          Length = 128535

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   tcttttctcatttgtctaaacatgt 126
             ||||||||| |||||||||||||||
Sbjct: 25554 tcttttctcctttgtctaaacatgt 25530



to top

>gb|AF267168.3| Homo sapiens chromosome 8 clone RP11-134N2, complete sequence
          Length = 180957

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 633    atcatgtaggaaaatcccatgaaag 657
              ||||||||||| |||||||||||||
Sbjct: 135056 atcatgtaggagaatcccatgaaag 135032



to top

>gb|AF254981.4| Homo sapiens chromosome 8 clone RP11-429D14 map 8q24.2, complete
             sequence
          Length = 202142

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 633   atcatgtaggaaaatcccatgaaag 657
             ||||||||||| |||||||||||||
Sbjct: 73220 atcatgtaggagaatcccatgaaag 73196



to top

>gb|AY106135.1| Zea mays PCO154542 mRNA sequence
          Length = 944

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 536 aagtatggccggtgcaaatgccctgggtctcgactctcacaacacccttcttgaatgtga 595
           ||||||| |||  ||| |||||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 650 aagtatgcccgacgcagatgccctgcgtctccaccctcaccacgcccttcttgaacgtga 591

            
Query: 596 a 596
           |
Sbjct: 590 a 590



to top

>emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chromosome X, complete
              sequence
          Length = 183291

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 226    gctgtcacaatgctgtctgtc 246
              |||||||||||||||||||||
Sbjct: 145223 gctgtcacaatgctgtctgtc 145243



to top

>gb|AC137117.15| Mus musculus chromosome 15, clone RP23-242E20, complete sequence
          Length = 202147

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   aaaacagaaaaatatacttt 335
             ||||||||||||||||||||
Sbjct: 80023 aaaacagaaaaatatacttt 80004



to top

>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    tgcagaatttacccccattg 269
              ||||||||||||||||||||
Sbjct: 449776 tgcagaatttacccccattg 449757



to top

>ref|XM_640143.1| Dictyostelium discoideum hypothetical protein (DDB0216999), partial
            mRNA
          Length = 7347

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  taaatgtttggaatcaatgc 227
            ||||||||||||||||||||
Sbjct: 6980 taaatgtttggaatcaatgc 6999



to top

>gb|AC095018.2| Drosophila melanogaster clone BACR24L18, complete sequence
          Length = 163116

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aaaaacagaaaaatatactt 334
             ||||||||||||||||||||
Sbjct: 12756 aaaaacagaaaaatatactt 12775



to top

>ref|XM_426559.1| PREDICTED: Gallus gallus similar to transmembrane protein with
            EGF-like and two follistatin-like domains 2 (LOC429002),
            mRNA
          Length = 4818

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 232  acaatgctgtctgtcatgtgcaga 255
            |||||||| |||||||||||||||
Sbjct: 3904 acaatgctatctgtcatgtgcaga 3927



to top

>gb|AC183274.3| Pan troglodytes BAC clone CH251-156F5 from chromosome 7, complete
              sequence
          Length = 163934

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    tttgaaatgtagttgtatat 206
              ||||||||||||||||||||
Sbjct: 157798 tttgaaatgtagttgtatat 157779



to top

>gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4,
             complete sequence
          Length = 257109

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   taaatgtttggaatcaatgc 227
             ||||||||||||||||||||
Sbjct: 38997 taaatgtttggaatcaatgc 39016



to top

>gb|AC134906.3| Mus musculus BAC clone RP23-361K7 from chromosome 19, complete sequence
          Length = 192484

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   tctgtcatgtgcagaattta 260
             ||||||||||||||||||||
Sbjct: 24277 tctgtcatgtgcagaattta 24258



to top

>gb|AC121940.3| Mus musculus BAC clone RP24-209B21 from chromosome 19, complete sequence
          Length = 203390

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    tctgtcatgtgcagaattta 260
              ||||||||||||||||||||
Sbjct: 113091 tctgtcatgtgcagaattta 113072



to top

>gb|AY194049.1| HIV-1 isolate UGANC1 from Uganda nonfunctional tat protein gene,
           partial sequence
          Length = 261

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 542 ggccggtgcaaatgccctgggtct 565
           ||||||||| ||||||||||||||
Sbjct: 250 ggccggtgctaatgccctgggtct 227



to top

>gb|AY194048.1| HIV-1 isolate UG3 from Uganda nonfunctional tat protein gene,
           partial sequence
          Length = 261

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 542 ggccggtgcaaatgccctgggtct 565
           ||||||||| ||||||||||||||
Sbjct: 250 ggccggtgctaatgccctgggtct 227



to top

>gb|AY194034.1| HIV-1 isolate UGMED2 from Uganda tat protein (tat) gene, partial
           cds
          Length = 258

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 542 ggccggtgcaaatgccctgggtct 565
           ||||||||| ||||||||||||||
Sbjct: 250 ggccggtgctaatgccctgggtct 227



to top

>gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, complete sequence
          Length = 159635

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   tgcttctaaaaacagaaaaatata 331
             |||||||||||||||||| |||||
Sbjct: 14073 tgcttctaaaaacagaaatatata 14096



to top

>emb|AL359257.9| Human DNA sequence from clone RP11-226E21 on chromosome 13 Contains
             part of a novel gene (KIAA0916)amd two novel genes,
             complete sequence
          Length = 97477

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   ttgtatatataaatgtttgg 218
             ||||||||||||||||||||
Sbjct: 75204 ttgtatatataaatgtttgg 75185



to top

>emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on chromosome 1 Contains the 5'
              end of the SMYD3 gene for SET and MYND domain containing 3,
              an ubiquitin specific protease 6 (Tre-2 oncogene) (USP6)
              pseudogene, a novel gene, a pseudogene similar to part of
              tumor necrosis factor receptor superfamily member 13B
              (TNFRSF13B), a pseudogene similar to part of
              carboxypeptidase D (CPD), the TFB2M gene for mitochondrial
              transcription factor B2, the 5' end of the gene for a novel
              protein (FLJ32001, DKFZp451A152, DKFZp451B077, FLJ00215)
              and two CpG islands, complete sequence
          Length = 207486

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    ttttccaaatttgaaatgta 197
              ||||||||||||||||||||
Sbjct: 178110 ttttccaaatttgaaatgta 178129



to top

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 302     tatgcttgcttctaaaaaca 321
               ||||||||||||||||||||
Sbjct: 1777862 tatgcttgcttctaaaaaca 1777843



to top

>emb|BX510945.13| Zebrafish DNA sequence from clone CH211-59D17 in linkage group 21,
             complete sequence
          Length = 202152

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   tatatataaatgtttggaat 221
             ||||||||||||||||||||
Sbjct: 84106 tatatataaatgtttggaat 84125



to top

>gb|AC036111.7| Homo sapiens chromosome 2, clone RP11-738O11, complete sequence
          Length = 184570

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    aatttgaaatgtagttgtat 204
              ||||||||||||||||||||
Sbjct: 150391 aatttgaaatgtagttgtat 150372



to top

>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 195757

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 512    actttttcaatccatgatccatca 535
              |||||||| |||||||||||||||
Sbjct: 178843 actttttctatccatgatccatca 178866



to top

>gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, complete sequence
          Length = 177301

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   tgcttctaaaaacagaaaaatata 331
             |||||||||||||||||| |||||
Sbjct: 27244 tgcttctaaaaacagaaatatata 27267



to top

>emb|BX510315.6| Zebrafish DNA sequence from clone CH211-59I18 in linkage group 24,
              complete sequence
          Length = 202562

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    tcacaatgctgtctgtcatg 249
              ||||||||||||||||||||
Sbjct: 121065 tcacaatgctgtctgtcatg 121084



to top

>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167026

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 512    actttttcaatccatgatccatca 535
              |||||||| |||||||||||||||
Sbjct: 147339 actttttctatccatgatccatca 147316



to top

>gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, complete sequence
          Length = 156721

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 308    tgcttctaaaaacagaaaaatata 331
              |||||||||||||||||| |||||
Sbjct: 115300 tgcttctaaaaacagaaatatata 115277



to top

>gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence
          Length = 167475

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    cttctaaaaacagaaaaata 329
              ||||||||||||||||||||
Sbjct: 138966 cttctaaaaacagaaaaata 138947



to top

>gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3, complete sequence
          Length = 174133

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   ttctaaaaacagaaaaatat 330
             ||||||||||||||||||||
Sbjct: 35042 ttctaaaaacagaaaaatat 35061



to top

>gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromosome 7, complete
              sequence
          Length = 168496

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    tttgaaatgtagttgtatat 206
              ||||||||||||||||||||
Sbjct: 109278 tttgaaatgtagttgtatat 109297



to top

>gb|AC048341.22| Homo sapiens 12 BAC RP11-631N16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 67400

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 316  aaaacagaaaaatatacttt 335
            ||||||||||||||||||||
Sbjct: 7910 aaaacagaaaaatatacttt 7891



to top

>gb|AC091636.1|AC091636 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone
             BACR03M20, complete sequence
          Length = 175335

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   aaaaacagaaaaatatactt 334
             ||||||||||||||||||||
Sbjct: 49729 aaaaacagaaaaatatactt 49710



to top

>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone
              BACR26M03, complete sequence
          Length = 197071

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    tgtatatataaatgtttgga 219
              ||||||||||||||||||||
Sbjct: 107803 tgtatatataaatgtttgga 107822



to top

>gb|AC009501.4| Homo sapiens BAC clone RP11-511I11 from 2, complete sequence
          Length = 157173

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    ttcctcctatgcttgcttctaaaa 318
              |||||||||||||| |||||||||
Sbjct: 151564 ttcctcctatgctttcttctaaaa 151587



to top

>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    aactgaaattggtgcataac 487
              ||||||||||||||||||||
Sbjct: 135335 aactgaaattggtgcataac 135354



to top

>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete
              sequence
          Length = 180092

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    ctgaattccactttttcaat 522
              ||||||||||||||||||||
Sbjct: 175632 ctgaattccactttttcaat 175651



to top

>gb|BC094158.1| Xenopus laevis cDNA clone MGC:115288 IMAGE:6861103, complete cds
          Length = 4580

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  ttctcagggtgccatcagca 421
            ||||||||||||||||||||
Sbjct: 2650 ttctcagggtgccatcagca 2669



to top

>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 488     ccgaccatggattttctgaa 507
               ||||||||||||||||||||
Sbjct: 2055750 ccgaccatggattttctgaa 2055769



to top

>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 158176

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   ttacatatgcaaggaccttt 447
             ||||||||||||||||||||
Sbjct: 97439 ttacatatgcaaggaccttt 97420



to top

>emb|BX510368.7| Zebrafish DNA sequence from clone DKEY-190P19 in linkage group 20,
             complete sequence
          Length = 84687

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 191   aaatgtagttgtatatataaatgt 214
             |||||||||||||||| |||||||
Sbjct: 79248 aaatgtagttgtatatttaaatgt 79225



to top

>emb|AL954739.9| Zebrafish DNA sequence from clone CH211-192K9 in linkage group 20,
             complete sequence
          Length = 154604

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 191   aaatgtagttgtatatataaatgt 214
             |||||||||||||||| |||||||
Sbjct: 66333 aaatgtagttgtatatttaaatgt 66356



to top

>emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in linkage group 19,
             complete sequence
          Length = 185640

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   ggaagttttttccaaatttg 190
             ||||||||||||||||||||
Sbjct: 98670 ggaagttttttccaaatttg 98689



to top

>gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69 of 118 of the complete
              sequence
          Length = 230001

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    tgtatatataaatgtttgga 219
              ||||||||||||||||||||
Sbjct: 174018 tgtatatataaatgtttgga 174037



to top

>gb|AE003715.4| Drosophila melanogaster chromosome 3R, section 53 of 118 of the complete
              sequence
          Length = 228547

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    aaaaacagaaaaatatactt 334
              ||||||||||||||||||||
Sbjct: 144938 aaaaacagaaaaatatactt 144919



to top

>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete
              sequence
          Length = 249021

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 512    actttttcaatccatgatccatca 535
              |||||||| |||||||||||||||
Sbjct: 209706 actttttctatccatgatccatca 209683



to top

>gb|AC148246.3| Saimiri boliviensis boliviensis clone CH254-471K13, complete sequence
          Length = 177755

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   tgcttctaaaaacagaaaaatata 331
             ||||||||||||| ||||||||||
Sbjct: 95895 tgcttctaaaaacggaaaaatata 95918



to top

>emb|AL929382.9| Mouse DNA sequence from clone RP23-136C24 on chromosome X, complete
             sequence
          Length = 201060

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   ttgcttctaaaaacagaaaa 326
             ||||||||||||||||||||
Sbjct: 35139 ttgcttctaaaaacagaaaa 35158



to top

>gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (BX-C), complete sequence
          Length = 338234

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aaaaacagaaaaatatactt 334
             ||||||||||||||||||||
Sbjct: 38780 aaaaacagaaaaatatactt 38799



to top

>gb|L07835.1|DROABDB Drosophila melanogaster (clone DS07696) Abd-B gene
          Length = 80423

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aaaaacagaaaaatatactt 334
             ||||||||||||||||||||
Sbjct: 38780 aaaaacagaaaaatatactt 38799


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,037,344
Number of Sequences: 3902068
Number of extensions: 7037344
Number of successful extensions: 146278
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145995
Number of HSP's gapped (non-prelim): 278
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top