ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33b17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK111862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 7e-47
2dbj|AK111494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 7e-47
3gb|AY111072.1| Zea mays CL5330_1 mRNA sequence 174 2e-40
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 168 2e-38
5dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 168 2e-38
6gb|AF081923.1|AF081923 Oryza sativa protein phosphatase 2A 55 kD... 103 8e-19
7ref|XM_464729.1| Oryza sativa (japonica cultivar-group), mRNA 98 5e-17
8dbj|AK101100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 5e-17
9gb|AF081922.1|AF081922 Oryza sativa protein phosphatase 2A 55 kD... 94 7e-16
10gb|BT014615.1| Lycopersicon esculentum clone 134101F, mRNA sequence 92 3e-15
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 5e-14
12dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic D... 88 5e-14
13gb|BT009432.1| Triticum aestivum clone wlmk1.pk0037.b8:fis, full... 86 2e-13
14gb|BT012719.1| Lycopersicon esculentum clone 113608F, mRNA sequence 72 3e-09
15gb|U18129.1|ATU18129 Arabidopsis thaliana 55 kDa B regulatory su... 48 0.039
16ref|NM_202274.1| Arabidopsis thaliana ATB ALPHA; nucleotide bind... 48 0.039
17ref|NM_104047.2| Arabidopsis thaliana ATB ALPHA; nucleotide bind... 48 0.039
18gb|BT000109.1| Arabidopsis thaliana type 2A protein serine/threo... 48 0.039
19gb|AY120756.1| Arabidopsis thaliana type 2A protein serine/threo... 48 0.039
20gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F1... 48 0.039
21emb|BX816494.1|CNS0AAKJ Arabidopsis thaliana Full-length cDNA Co... 48 0.039
22gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 42 2.4
23ref|XM_842912.1| Leishmania major strain Friedlin cysteine pepti... 42 2.4
24gb|AC020894.5| Homo sapiens chromosome 5 clone CTC-293A9, comple... 42 2.4
25ref|XM_463396.1| Oryza sativa (japonica cultivar-group), predic... 40 9.5
26gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome... 40 9.5
27gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosom... 40 9.5
28gb|AC069280.10| Homo sapiens BAC clone RP11-3P22 from 7, complet... 40 9.5
29emb|AL133391.5| Human DNA sequence from clone RP11-22C13 on chro... 40 9.5
30gb|AC109352.3| Homo sapiens BAC clone RP11-489P20 from 4, comple... 40 9.5
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
32gb|AF196289.1|AF196289 Medicago sativa subsp. x varia Ser/Thr sp... 40 9.5
33dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
34dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
35gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, comple... 40 9.5
36dbj|AP005241.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.5
37dbj|AP005130.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.5
38gb|BC082957.1| Xenopus laevis hypothetical LOC494814, mRNA (cDNA... 40 9.5
39dbj|AK116696.1| Ciona intestinalis cDNA, clone:cieg032p17, full ... 40 9.5
40gb|BC108443.1| Xenopus laevis cDNA clone IMAGE:7978084, partial cds 40 9.5 
>dbj|AK111862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L19, full
           insert sequence
          Length = 961

 Score =  196 bits (99), Expect = 7e-47
 Identities = 174/199 (87%)
 Strand = Plus / Minus

                                                                       
Query: 451 aaccaagaacgataaattttctctagagaattttctacgcataatacatatacaggctat 510
           |||||| ||| |||||||||||| ||    || |||||||||||||||||||||  ||||
Sbjct: 513 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaaactat 454

                                                                       
Query: 511 ttgcagcagcgcatgcaatggaattctcggtggggtgccatgcaaggtggagcaacttcg 570
           |||||||||| ||||| || |||||||| || |||||||||||||| ||||||||||| |
Sbjct: 453 ttgcagcagcacatgcgatagaattctcagttgggtgccatgcaagatggagcaactttg 394

                                                                       
Query: 571 tcgagaagtctaatgagtttccattggcatcaacacctagattttccccacctcttcgca 630
           |||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||||| ||||
Sbjct: 393 tcgaaaagtcaaatgaatttccattggcatcaacgccttgattttccccacctctccgca 334

                              
Query: 631 caccacgggtcatagaggt 649
           ||||||||| || ||||||
Sbjct: 333 caccacgggccagagaggt 315



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 276 ataatttacacatttactaatgaatcaaca 305
           ||||||||||||| |||||| |||||||||
Sbjct: 675 ataatttacacatgtactaaagaatcaaca 646
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>dbj|AK111494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D03, full
           insert sequence
          Length = 2264

 Score =  196 bits (99), Expect = 7e-47
 Identities = 174/199 (87%)
 Strand = Plus / Plus

                                                                       
Query: 451 aaccaagaacgataaattttctctagagaattttctacgcataatacatatacaggctat 510
           |||||| ||| |||||||||||| ||    || |||||||||||||||||||||  ||||
Sbjct: 434 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaaactat 493

                                                                       
Query: 511 ttgcagcagcgcatgcaatggaattctcggtggggtgccatgcaaggtggagcaacttcg 570
           |||||||||| ||||| || |||||||| || |||||||||||||| ||||||||||| |
Sbjct: 494 ttgcagcagcacatgcgatagaattctcagttgggtgccatgcaagatggagcaactttg 553

                                                                       
Query: 571 tcgagaagtctaatgagtttccattggcatcaacacctagattttccccacctcttcgca 630
           |||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||||| ||||
Sbjct: 554 tcgaaaagtcaaatgaatttccattggcatcaacgccttgattttccccacctctccgca 613

                              
Query: 631 caccacgggtcatagaggt 649
           ||||||||| || ||||||
Sbjct: 614 caccacgggccagagaggt 632



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 276 ataatttacacatttactaatgaatcaaca 305
           ||||||||||||| |||||| |||||||||
Sbjct: 272 ataatttacacatgtactaaagaatcaaca 301
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>gb|AY111072.1| Zea mays CL5330_1 mRNA sequence
          Length = 796

 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/156 (89%)
 Strand = Plus / Minus

                                                                       
Query: 484 tctacgcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtgg 543
           ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |
Sbjct: 251 tctacgcataatacatatacaagctatttgcagcagcacatgcaatagaattctcggtcg 192

                                                                       
Query: 544 ggtgccatgcaaggtggagcaacttcgtcgagaagtctaatgagtttccattggcatcaa 603
           |||||||||| |||||||||| |||||| |||||||| | ||| || ||||| |||||||
Sbjct: 191 ggtgccatgcgaggtggagcagcttcgttgagaagtcgagtgaattcccattagcatcaa 132

                                               
Query: 604 cacctagattttccccacctcttcgcacaccacggg 639
           | ||| ||||||| |||||||| || ||||||||||
Sbjct: 131 cgccttgattttctccacctctccgaacaccacggg 96



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 49/55 (89%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 275 tataatttacacatttactaatgaatcaacaggggcgcaatccgctagcacagca 329
           |||||||||||||| |||||| ||||||||| ||||||| || | ||||||||||
Sbjct: 453 tataatttacacatgtactaaagaatcaaca-gggcgcagtctgttagcacagca 400
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  168 bits (85), Expect = 2e-38
 Identities = 151/173 (87%)
 Strand = Plus / Minus

                                                                            
Query: 451      aaccaagaacgataaattttctctagagaattttctacgcataatacatatacaggctat 510
                |||||| ||| |||||||||||| ||    || |||||||||||||||||||||  ||||
Sbjct: 21314012 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaaactat 21313953

                                                                            
Query: 511      ttgcagcagcgcatgcaatggaattctcggtggggtgccatgcaaggtggagcaacttcg 570
                |||||||||| ||||| || |||||||| || |||||||||||||| ||||||||||| |
Sbjct: 21313952 ttgcagcagcacatgcgatagaattctcagttgggtgccatgcaagatggagcaactttg 21313893

                                                                     
Query: 571      tcgagaagtctaatgagtttccattggcatcaacacctagattttccccacct 623
                |||| ||||| ||||| ||||||||||||||||| ||| ||||||||||||||
Sbjct: 21313892 tcgaaaagtcaaatgaatttccattggcatcaacgccttgattttccccacct 21313840



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 276      ataatttacacatttactaatgaatcaaca 305
                ||||||||||||| |||||| |||||||||
Sbjct: 21314174 ataatttacacatgtactaaagaatcaaca 21314145
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>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0656E03
          Length = 181786

 Score =  168 bits (85), Expect = 2e-38
 Identities = 151/173 (87%)
 Strand = Plus / Minus

                                                                          
Query: 451    aaccaagaacgataaattttctctagagaattttctacgcataatacatatacaggctat 510
              |||||| ||| |||||||||||| ||    || |||||||||||||||||||||  ||||
Sbjct: 109388 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaaactat 109329

                                                                          
Query: 511    ttgcagcagcgcatgcaatggaattctcggtggggtgccatgcaaggtggagcaacttcg 570
              |||||||||| ||||| || |||||||| || |||||||||||||| ||||||||||| |
Sbjct: 109328 ttgcagcagcacatgcgatagaattctcagttgggtgccatgcaagatggagcaactttg 109269

                                                                   
Query: 571    tcgagaagtctaatgagtttccattggcatcaacacctagattttccccacct 623
              |||| ||||| ||||| ||||||||||||||||| ||| ||||||||||||||
Sbjct: 109268 tcgaaaagtcaaatgaatttccattggcatcaacgccttgattttccccacct 109216



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 276    ataatttacacatttactaatgaatcaaca 305
              ||||||||||||| |||||| |||||||||
Sbjct: 109550 ataatttacacatgtactaaagaatcaaca 109521
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>gb|AF081923.1|AF081923 Oryza sativa protein phosphatase 2A 55 kDa B regulatory subunit mRNA,
            complete cds
          Length = 2132

 Score =  103 bits (52), Expect = 8e-19
 Identities = 142/172 (82%)
 Strand = Plus / Minus

                                                                        
Query: 486  tacgcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtgggg 545
            |||||||| ||||| |||| ||||||||||||||| || || ||||||||||| || |||
Sbjct: 1583 tacgcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttggg 1524

                                                                        
Query: 546  tgccatgcaaggtggagcaacttcgtcgagaagtctaatgagtttccattggcatcaaca 605
            ||||||||||| ||||||||||| || || |  ||  | || |||||||| ||||| || 
Sbjct: 1523 tgccatgcaagatggagcaactttgttgaaagatcgtaagaatttccattagcatcgact 1464

                                                                
Query: 606  cctagattttccccacctcttcgcacaccacgggtcatagaggtcagcgtcc 657
            ||  |||||||||||||||| | |||  |||||||||  |||||||| ||||
Sbjct: 1463 cccggattttccccacctctcctcacggcacgggtcaatgaggtcagggtcc 1412
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>ref|XM_464729.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2237

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 139/169 (82%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 1749 gcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttgggtgc 1690

                                                                        
Query: 549  catgcaaggtggagcaacttcgtcgagaagtctaatgagtttccattggcatcaacacct 608
            |||||||| ||||||||||| || || |  ||  | || |||||||| |||||||| || 
Sbjct: 1689 catgcaagatggagcaactttgttgaaagatcgtaagaatttccattagcatcaactccc 1630

                                                             
Query: 609  agattttccccacctcttcgcacaccacgggtcatagaggtcagcgtcc 657
             ||||||| |||||||| | |||  |||||||||  |||||||| ||||
Sbjct: 1629 ggattttctccacctctcctcacggcacgggtcaatgaggtcagggtcc 1581
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>dbj|AK101100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025A11, full
            insert sequence
          Length = 2238

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 139/169 (82%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 1749 gcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttgggtgc 1690

                                                                        
Query: 549  catgcaaggtggagcaacttcgtcgagaagtctaatgagtttccattggcatcaacacct 608
            |||||||| ||||||||||| || || |  ||  | || |||||||| |||||||| || 
Sbjct: 1689 catgcaagatggagcaactttgttgaaagatcgtaagaatttccattagcatcaactccc 1630

                                                             
Query: 609  agattttccccacctcttcgcacaccacgggtcatagaggtcagcgtcc 657
             ||||||| |||||||| | |||  |||||||||  |||||||| ||||
Sbjct: 1629 ggattttctccacctctcctcacggcacgggtcaatgaggtcagggtcc 1581
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>gb|AF081922.1|AF081922 Oryza sativa protein phosphatase 2A 55 kDa B regulatory subunit gene,
            complete cds
          Length = 9386

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 486  tacgcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtgggg 545
            |||||||| ||||| |||| ||||||||||||||| || || ||||||||||| || |||
Sbjct: 8416 tacgcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttggg 8357

                                   
Query: 546  tgccatgcaaggtggagcaactt 568
            ||||||||||| |||||||||||
Sbjct: 8356 tgccatgcaagatggagcaactt 8334
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>gb|BT014615.1| Lycopersicon esculentum clone 134101F, mRNA sequence
          Length = 2298

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 97/114 (85%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||||||||| |||| ||| ||||||||||| |||||||| ||||| || || || |||
Sbjct: 1951 gcataatacatgtacaagctgtttgcagcagcacatgcaattgaattttcagttggatgc 1892

                                                                  
Query: 549  catgcaaggtggagcaacttcgtcgagaagtctaatgagtttccattggcatca 602
            |||| |||||||||||  || || | ||| || |||||||||||||||||||||
Sbjct: 1891 catgtaaggtggagcagtttggttgtgaaatcaaatgagtttccattggcatca 1838
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                           
Query: 489     gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
               ||||| ||||| |||| ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 6963652 gcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttgggtgc 6963711

                                   
Query: 549     catgcaaggtggagcaactt 568
               |||||||| |||||||||||
Sbjct: 6963712 catgcaagatggagcaactt 6963731
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>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470A03
          Length = 133167

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                         
Query: 489   gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
             ||||| ||||| |||| ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 57274 gcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttgggtgc 57333

                                 
Query: 549   catgcaaggtggagcaactt 568
             |||||||| |||||||||||
Sbjct: 57334 catgcaagatggagcaactt 57353
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>gb|BT009432.1| Triticum aestivum clone wlmk1.pk0037.b8:fis, full insert mRNA
            sequence
          Length = 2324

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 136/167 (81%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||||||||| |||| ||||||  ||||||| || |||||||||||||| || ||||||
Sbjct: 1674 gcataatacatgtacaagctattcccagcagcacacgcaatggaattctcagttgggtgc 1615

                                                                        
Query: 549  catgcaaggtggagcaacttcgtcgagaagtctaatgagtttccattggcatcaacacct 608
            || ||||| ||||| ||||| || ||||||||    || || |||||| ||||  | |||
Sbjct: 1614 cacgcaagatggagtaactttgttgagaagtcattagaattcccattgccatcggctcct 1555

                                                           
Query: 609  agattttccccacctcttcgcacaccacgggtcatagaggtcagcgt 655
              |||||| || ||||| | |||| ||||||||| ||||||||||||
Sbjct: 1554 gcattttcaccccctctcctcacagcacgggtcaaagaggtcagcgt 1508
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>gb|BT012719.1| Lycopersicon esculentum clone 113608F, mRNA sequence
          Length = 2483

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 96/116 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  taatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgccat 551
            ||||||||||||| ||| ||||| ||||| ||||| |||||||| || || || ||||||
Sbjct: 1815 taatacatatacaagctgtttgcggcagcacatgctatggaattttccgtcggatgccat 1756

                                                                    
Query: 552  gcaaggtggagcaacttcgtcgagaagtctaatgagtttccattggcatcaacacc 607
            || || || ||||  || ||||  || || |||||||||||||| |||||||||||
Sbjct: 1755 gccagatgaagcagttttgtcgtaaaatcaaatgagtttccatttgcatcaacacc 1700
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>gb|U18129.1|ATU18129 Arabidopsis thaliana 55 kDa B regulatory subunit of phosphatase 2A
            mRNA, complete cds
          Length = 2106

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| |||||||||||| ||||| ||||| || |||||| | || |||
Sbjct: 1724 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1665

                    
Query: 549  catgcaag 556
            || |||||
Sbjct: 1664 caagcaag 1657
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>ref|NM_202274.1| Arabidopsis thaliana ATB ALPHA; nucleotide binding / protein
            phosphatase type 2A regulator AT1G51690 (ATB ALPHA)
            transcript variant AT1G51690.2 mRNA, complete cds
          Length = 2254

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| |||||||||||| ||||| ||||| || |||||| | || |||
Sbjct: 1778 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1719

                    
Query: 549  catgcaag 556
            || |||||
Sbjct: 1718 caagcaag 1711
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>ref|NM_104047.2| Arabidopsis thaliana ATB ALPHA; nucleotide binding / protein
            phosphatase type 2A regulator AT1G51690 (ATB ALPHA)
            transcript variant AT1G51690.1 mRNA, complete cds
          Length = 2257

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| |||||||||||| ||||| ||||| || |||||| | || |||
Sbjct: 1781 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1722

                    
Query: 549  catgcaag 556
            || |||||
Sbjct: 1721 caagcaag 1714
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>gb|BT000109.1| Arabidopsis thaliana type 2A protein serine/threonine phosphatase 55
            kDa B regulatory subunit (At1g51690) mRNA, complete cds
          Length = 1624

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| |||||||||||| ||||| ||||| || |||||| | || |||
Sbjct: 1538 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1479

                    
Query: 549  catgcaag 556
            || |||||
Sbjct: 1478 caagcaag 1471
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>gb|AY120756.1| Arabidopsis thaliana type 2A protein serine/threonine phosphatase 55
            kDa B regulatory subunit (At1g51690) mRNA, complete cds
          Length = 2115

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| |||||||||||| ||||| ||||| || |||||| | || |||
Sbjct: 1780 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1721

                    
Query: 549  catgcaag 556
            || |||||
Sbjct: 1720 caagcaag 1713
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>gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F19C24 genomic sequence, complete
             sequence
          Length = 124511

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 489   gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
             ||||| ||||| |||| |||||||||||| ||||| ||||| || |||||| | || |||
Sbjct: 75757 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 75816

                     
Query: 549   catgcaag 556
             || |||||
Sbjct: 75817 caagcaag 75824
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>emb|BX816494.1|CNS0AAKJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH51ZE08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2198

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| |||||||||||| ||||| ||||| || |||||| | || |||
Sbjct: 1758 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1699

                    
Query: 549  catgcaag 556
            || |||||
Sbjct: 1698 caagcaag 1691
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 538    cggtggggtgccatgcaaggtggag 562
              |||||| ||||||||||||||||||
Sbjct: 198120 cggtggcgtgccatgcaaggtggag 198144
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>ref|XM_842912.1| Leishmania major strain Friedlin cysteine peptidase, clan CA, family
            C2 (LMJ_0307) partial mRNA
          Length = 16077

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 538  cggtggggtgccatgcaaggtggag 562
            |||||| ||||||||||||||||||
Sbjct: 3531 cggtggcgtgccatgcaaggtggag 3555
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>gb|AC020894.5| Homo sapiens chromosome 5 clone CTC-293A9, complete sequence
          Length = 166983

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    tataatttacacatttactaa 295
              |||||||||||||||||||||
Sbjct: 127671 tataatttacacatttactaa 127691
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>ref|XM_463396.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 489  gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
            ||||| ||||| |||| ||| || ||||| || || |||||  |||| ||||  ||||||
Sbjct: 1523 gcatagtacatgtacaagctgttcgcagcggcacaagcaattaaattttcggatgggtgc 1464

                                
Query: 549  catgcaaggtggagcaactt 568
            ||||| || |||||||||||
Sbjct: 1463 catgcgagatggagcaactt 1444
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>gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome 17, complete sequence
          Length = 203180

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   gccctgcactgtccctctgg 406
             ||||||||||||||||||||
Sbjct: 35666 gccctgcactgtccctctgg 35647
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>gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosome 17, complete sequence
          Length = 221980

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    gccctgcactgtccctctgg 406
              ||||||||||||||||||||
Sbjct: 127785 gccctgcactgtccctctgg 127766
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>gb|AC069280.10| Homo sapiens BAC clone RP11-3P22 from 7, complete sequence
          Length = 167563

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gtgactttctatcttttgat 202
            ||||||||||||||||||||
Sbjct: 8824 gtgactttctatcttttgat 8843
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>emb|AL133391.5| Human DNA sequence from clone RP11-22C13 on chromosome 9q21.31-22.1
              Contains a ribosomal protein S6 (RPS6) pseudogene, complete
              sequence
          Length = 168324

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    ttttctctagagaattttct 486
              ||||||||||||||||||||
Sbjct: 132737 ttttctctagagaattttct 132756
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>gb|AC109352.3| Homo sapiens BAC clone RP11-489P20 from 4, complete sequence
          Length = 157443

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 273    catataatttacacatttactaat 296
              ||||||||| ||||||||||||||
Sbjct: 142083 catataattaacacatttactaat 142060
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                            
Query: 489      gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
                ||||| ||||| |||| ||| || ||||| || || |||||  |||| ||||  ||||||
Sbjct: 23572205 gcatagtacatgtacaagctgttcgcagcggcacaagcaattaaattttcggatgggtgc 23572146

                                    
Query: 549      catgcaaggtggagcaactt 568
                ||||| || |||||||||||
Sbjct: 23572145 catgcgagatggagcaactt 23572126
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>gb|AF196289.1|AF196289 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase
            2A B regulatory subunit beta isoform mRNA, complete cds
          Length = 2194

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 489  gcataatacatatacaggctatttgcagcagc 520
            ||||| ||||| |||| |||||||||||||||
Sbjct: 1696 gcatagtacatgtacaagctatttgcagcagc 1665
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>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518F01
          Length = 154541

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                         
Query: 489   gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
             ||||| ||||| |||| ||| || ||||| || || |||||  |||| ||||  ||||||
Sbjct: 34904 gcatagtacatgtacaagctgttcgcagcggcacaagcaattaaattttcggatgggtgc 34845

                                 
Query: 549   catgcaaggtggagcaactt 568
             ||||| || |||||||||||
Sbjct: 34844 catgcgagatggagcaactt 34825
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>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025A05
          Length = 154298

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                          
Query: 489    gcataatacatatacaggctatttgcagcagcgcatgcaatggaattctcggtggggtgc 548
              ||||| ||||| |||| ||| || ||||| || || |||||  |||| ||||  ||||||
Sbjct: 135510 gcatagtacatgtacaagctgttcgcagcggcacaagcaattaaattttcggatgggtgc 135451

                                  
Query: 549    catgcaaggtggagcaactt 568
              ||||| || |||||||||||
Sbjct: 135450 catgcgagatggagcaactt 135431
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>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence
          Length = 198847

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    gagatgaaccaaataagaca 126
              ||||||||||||||||||||
Sbjct: 119222 gagatgaaccaaataagaca 119241
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>dbj|AP005241.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-502P1, complete
              sequence
          Length = 183466

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    actgccctgcactgtccctc 403
              ||||||||||||||||||||
Sbjct: 171946 actgccctgcactgtccctc 171965
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>dbj|AP005130.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-168H23, complete
             sequence
          Length = 181276

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   actgccctgcactgtccctc 403
             ||||||||||||||||||||
Sbjct: 56201 actgccctgcactgtccctc 56220
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>gb|BC082957.1| Xenopus laevis hypothetical LOC494814, mRNA (cDNA clone
            IMAGE:3400925), partial cds
          Length = 2390

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  atgaagagatgaaccaaata 121
            ||||||||||||||||||||
Sbjct: 1582 atgaagagatgaaccaaata 1601
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>dbj|AK116696.1| Ciona intestinalis cDNA, clone:cieg032p17, full insert sequence
          Length = 4605

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   tatcatccagacaattgaag 63
            ||||||||||||||||||||
Sbjct: 1393 tatcatccagacaattgaag 1374
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>gb|BC108443.1| Xenopus laevis cDNA clone IMAGE:7978084, partial cds
          Length = 2977

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  atgaagagatgaaccaaata 121
            ||||||||||||||||||||
Sbjct: 2125 atgaagagatgaaccaaata 2144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,223,376
Number of Sequences: 3902068
Number of extensions: 5223376
Number of successful extensions: 93862
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93696
Number of HSP's gapped (non-prelim): 161
length of query: 691
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 668
effective length of database: 17,143,297,704
effective search space: 11451722866272
effective search space used: 11451722866272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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