ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32m17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PDPK1_DROME (Q9W0V1) 3-phosphoinositide-dependent protein kinase... 52 2e-06
2PDPK1_RAT (O55173) 3-phosphoinositide-dependent protein kinase 1... 44 3e-04
3PDPK1_MOUSE (Q9Z2A0) 3-phosphoinositide-dependent protein kinase... 44 3e-04
4PDPK1_HUMAN (O15530) 3-phosphoinositide-dependent protein kinase... 44 3e-04
5MMP18_XENLA (O13065) Matrix metalloproteinase-18 precursor (EC 3... 30 7.9

>PDPK1_DROME (Q9W0V1) 3-phosphoinositide-dependent protein kinase 1 (EC|
           2.7.11.1) (dPDK-1) (Serine/threonine-protein kinase 61C)
           (dSTPK61)
          Length = 836

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 24/71 (33%), Positives = 40/71 (56%)
 Frame = -3

Query: 551 VILTNKPQLICVDPAKMVTKGNISWSDDPSELNVQVADSSHFRISTPKKVFIFEDAKQRA 372
           ++LT  P+LI +DP +M+ KG I WS D   L  +  +   F + TP + +  +D +  A
Sbjct: 693 LLLTTGPRLIYIDPVQMIKKGEIPWSPD---LRAEYKNFKIFFVHTPNRTYYLDDPEGYA 749

Query: 371 WQWKNAIEDLQ 339
             W  AIE+++
Sbjct: 750 IHWSEAIENMR 760



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>PDPK1_RAT (O55173) 3-phosphoinositide-dependent protein kinase 1 (EC|
           2.7.11.1) (Protein kinase B kinase) (PkB kinase)
          Length = 559

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 23/71 (32%), Positives = 34/71 (47%)
 Frame = -3

Query: 554 QVILTNKPQLICVDPAKMVTKGNISWSDDPSELNVQVADSSHFRISTPKKVFIFEDAKQR 375
           Q++LT  P L  VDP   V KG I WS    EL  +  +   F + TP + +   D    
Sbjct: 478 QLLLTEGPHLYYVDPVNKVLKGEIPWS---QELRPEAKNFKTFFVHTPNRTYYLMDPSGN 534

Query: 374 AWQWKNAIEDL 342
           A +W   I+++
Sbjct: 535 AHKWCRKIQEV 545



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>PDPK1_MOUSE (Q9Z2A0) 3-phosphoinositide-dependent protein kinase 1 (EC|
           2.7.11.1) (mPDK1)
          Length = 559

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 23/71 (32%), Positives = 34/71 (47%)
 Frame = -3

Query: 554 QVILTNKPQLICVDPAKMVTKGNISWSDDPSELNVQVADSSHFRISTPKKVFIFEDAKQR 375
           Q++LT  P L  VDP   V KG I WS    EL  +  +   F + TP + +   D    
Sbjct: 478 QLLLTEGPHLYYVDPVNKVLKGEIPWS---QELRPEAKNFKTFFVHTPNRTYYLMDPSGN 534

Query: 374 AWQWKNAIEDL 342
           A +W   I+++
Sbjct: 535 AHKWCRKIQEV 545



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>PDPK1_HUMAN (O15530) 3-phosphoinositide-dependent protein kinase 1 (EC|
           2.7.11.1) (hPDK1)
          Length = 556

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 23/71 (32%), Positives = 34/71 (47%)
 Frame = -3

Query: 554 QVILTNKPQLICVDPAKMVTKGNISWSDDPSELNVQVADSSHFRISTPKKVFIFEDAKQR 375
           Q++LT  P L  VDP   V KG I WS    EL  +  +   F + TP + +   D    
Sbjct: 475 QLLLTEGPHLYYVDPVNKVLKGEIPWS---QELRPEAKNFKTFFVHTPNRTYYLMDPSGN 531

Query: 374 AWQWKNAIEDL 342
           A +W   I+++
Sbjct: 532 AHKWCRKIQEV 542



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>MMP18_XENLA (O13065) Matrix metalloproteinase-18 precursor (EC 3.4.24.-)|
           (MMP-18) (Collagenase-4) (xCol4)
          Length = 467

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 345 IFNRILPLPGTLFCILKYEHLLWRGDPKMRGVGYLYIEFTWIIRPTNI 488
           +FN +  + G L   +K    LWR  P+      ++++  W   PTNI
Sbjct: 285 VFNAVTTMRGELIFFVK--RFLWRKHPQASEAELMFVQAFWPSLPTNI 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,128,423
Number of Sequences: 219361
Number of extensions: 1961871
Number of successful extensions: 4202
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4201
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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