ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32m15 |
|---|---|
| Clone Library Name | barley_pub |
>SQV8_CAEEL (Q09363) Probable glucuronosyltransferase sqv-8 (EC 2.4.1.135)| (Vulval invagination protein sqv-8) (Squashed vulva protein 8) Length = 356 Score = 34.3 bits (77), Expect = 0.34 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -2 Query: 603 GLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQLN 481 G QES F+E L + +E L + C +V VW+ E P+L+ Sbjct: 291 GYQESTFLENLGIHRYNMEPLAEMCTKVYVWHTRTEKPKLS 331
>B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 329 Score = 32.7 bits (73), Expect = 1.00 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = -2 Query: 633 SVIVHSGGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 +V G + G+QES F++++ E ++E +NC +V+VW+ E L Sbjct: 266 AVFKRRGSQPGMQESDFLKQITTVE-ELEPKANNCTKVLVWHTRTEKVNL 314
>B3GA2_HUMAN (Q9NPZ5) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 323 Score = 32.7 bits (73), Expect = 1.00 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = -2 Query: 633 SVIVHSGGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 +V G + G+QES F++++ E ++E +NC +V+VW+ E L Sbjct: 260 AVFKRRGSQPGMQESDFLKQITTVE-ELEPKANNCTKVLVWHTRTEKVNL 308
>B3GA2_MOUSE (P59270) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = -2 Query: 633 SVIVHSGGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 +V G + G+QES F++++ E ++E NC +V+VW+ E L Sbjct: 261 AVFKRRGSQPGMQESDFLKQITTVE-ELEPKASNCTKVLVWHTRTEKVNL 309
>B3GA1_PANTR (Q5CB04) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 332 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -2 Query: 615 GGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 G +GG QES + +LV +E NC +++VW+ E P L Sbjct: 275 GVKGGYQESSLLRELV-TLNDLEPKAANCTKILVWHTRTEKPVL 317
>B3GA1_CANFA (Q5CB03) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 335 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -2 Query: 615 GGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 G +GG QES + +LV +E NC +++VW+ E P L Sbjct: 278 GVKGGYQESSLLRELV-TLNDLEPKAANCTKILVWHTRTEKPVL 320
>B3GA1_RAT (O35789) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -2 Query: 615 GGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 G +GG QES + +LV +E NC +++VW+ E P L Sbjct: 277 GVKGGYQESSLLRELV-TLNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA1_MOUSE (Q9CW73) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -2 Query: 615 GGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 G +GG QES + +LV +E NC +++VW+ E P L Sbjct: 277 GVKGGYQESSLLRELV-TLNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA1_HUMAN (Q9P2W7) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -2 Query: 615 GGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 G +GG QES + +LV +E NC +++VW+ E P L Sbjct: 277 GVKGGYQESSLLRELV-TLNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA2_RAT (Q9Z137) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 31.6 bits (70), Expect = 2.2 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = -2 Query: 633 SVIVHSGGRGGLQESRFVEKLVKNERQIEGLPDNCNRVMVWNFALEPPQL 484 +V G + G+QES F++++ + ++E +NC +V+VW+ E L Sbjct: 261 AVFKRRGSQPGMQESDFLKQITTVD-ELEPKANNCTKVLVWHTRTEKVNL 309
>GLE1_MOUSE (Q8R322) Nucleoporin GLE1 (GLE1-like protein)| Length = 699 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 9/85 (10%) Frame = -3 Query: 476 PPDGHCGTTLKSTKNCNLGSL---RNRFCTVSSMINLCGGIEVLS------FDFVLSTTS 324 P DG C TL++ +N + G L R ++ C + LS D +L TS Sbjct: 2 PSDGRCWETLRALRNTSKGRLRYDREWLLRYEDVLEECMSLPKLSSYSGWVVDHILPNTS 61 Query: 323 GRSAANRLPSETACATGPAKS*RQS 249 G + + S+ + ++G A QS Sbjct: 62 GHTQESAPSSDNSPSSGSASGLYQS 86
>DRD1_RABIT (O02664) D(1A) dopamine receptor (Fragment)| Length = 180 Score = 30.8 bits (68), Expect = 3.8 Identities = 13/53 (24%), Positives = 27/53 (50%) Frame = -3 Query: 500 WNLPSSTTPPDGHCGTTLKSTKNCNLGSLRNRFCTVSSMINLCGGIEVLSFDF 342 W+ T+PPDG+ + ++ NC+ SL + SS++N + ++ + Sbjct: 124 WHKAKPTSPPDGNATSLDETVDNCD-SSLSRTYSISSSLVNFYNPVAIMXVTY 175
>ATS5_MOUSE (Q9R001) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 5) (ADAM-TS 5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (Implantin) Length = 930 Score = 27.3 bits (59), Expect(2) = 6.1 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = -3 Query: 554 K*KAFQTTATGSWSGTSPWNLPSSTTPPDGHCGTTLK-STKNCNLGSLRN--RFCT 396 K K + T++ G+W PW S + CG ++ + ++CN + RN R+CT Sbjct: 558 KKKYYSTSSHGNWGSWGPWGQCSRS------CGGGVQFAYRHCNNPAPRNSGRYCT 607 Score = 21.2 bits (43), Expect(2) = 6.1 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = -1 Query: 307 TDCPPKQPARRDPQSRSVNHTSSSAK 230 T CPP + R Q + N S AK Sbjct: 619 TPCPPNGKSFRHEQCEAKNGYQSDAK 644
>GLE1_RAT (Q4KLN4) Nucleoporin GLE1 (GLE1-like protein)| Length = 698 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Frame = -3 Query: 476 PPDGHCGTTLKSTKNCNLGSL---RNRFCTVSSMINLCGGIEVLS------FDFVLSTTS 324 P DG C TL++ +N + G L R ++ C + LS D +L TS Sbjct: 2 PSDGRCWETLRALRNSSKGRLRYDREWLLRYEDVLEECMSLPKLSSYSGWVVDHILPNTS 61 Query: 323 GRSAANRLPSETACATGPAKS*RQS 249 + N S+ + ++G A QS Sbjct: 62 HHTQENAPSSDNSPSSGSASGLYQS 86
>ENPP3_RAT (P97675) Ectonucleotide pyrophosphatase/phosphodiesterase 3 (E-NPP| 3) (Phosphodiesterase I/nucleotide pyrophosphatase 3) (Phosphodiesterase I beta) (PD-Ibeta) (RB13-6 antigen) (B10) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleoti Length = 875 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = -2 Query: 483 NYPTGWSLWNHLEVDKEL*PRKSPQPFLHRLKHDKPLRWHRGSEFRLCAVH 331 N P + +N E+ ++L RKS Q F L D P R H R+ VH Sbjct: 410 NIPQDFFTFNSEEIVRDLSCRKSDQHFKPYLTPDLPKRLHYAKNVRIDKVH 460 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,416,475 Number of Sequences: 219361 Number of extensions: 2077128 Number of successful extensions: 6393 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 6049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6384 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
