ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags33b09 |
|---|---|
| Clone Library Name | barley_pub |
>CAPI_STAAU (P39858) Protein capI| Length = 334 Score = 75.9 bits (185), Expect = 1e-13 Identities = 34/81 (41%), Positives = 54/81 (66%) Frame = -2 Query: 666 APFRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGY 487 AP++ YN+GN SPV + + V+ +E L +A + + + + GDVP T+AN+ R++ + Sbjct: 253 APYKVYNIGNNSPVRLMEFVEAIENKLGKEARKNYMDL-QPGDVPETYANVDDLFRDIDF 311 Query: 486 RPSTDLQTGLKKFVRWYLEYY 424 +P T +Q G+ KFV WYLEYY Sbjct: 312 KPETTIQDGVNKFVDWYLEYY 332
>Y1055_METJA (Q58455) Hypothetical protein MJ1055| Length = 326 Score = 68.6 bits (166), Expect = 2e-11 Identities = 30/77 (38%), Positives = 53/77 (68%) Frame = -2 Query: 660 FRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRP 481 + +NLGN+ PV + ++L+EK L KA ++ + M ++GDV T+A++S +++ LGY+P Sbjct: 243 YEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPM-QDGDVLRTYADLSKSEKLLGYKP 301 Query: 480 STDLQTGLKKFVRWYLE 430 ++ GLK+F W+LE Sbjct: 302 KVTIEEGLKRFCNWFLE 318
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 64.3 bits (155), Expect = 3e-10 Identities = 29/81 (35%), Positives = 49/81 (60%) Frame = -2 Query: 666 APFRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGY 487 AP+R YN+GN+SPV + + LE L ++A + ++ + + GDV T A+ +G+ Sbjct: 253 APYRVYNIGNSSPVELMDYIQALEDALGIEAKKNMLPL-QPGDVLETSADTKALYEVIGF 311 Query: 486 RPSTDLQTGLKKFVRWYLEYY 424 P T ++ G+K FV WY ++Y Sbjct: 312 TPETTVKDGVKNFVNWYRDFY 332
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 58.9 bits (141), Expect = 1e-08 Identities = 29/81 (35%), Positives = 46/81 (56%) Frame = -2 Query: 666 APFRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGY 487 APFR N G PV + V+ +EK + A+ ++ M + GDVP T A+ L + G+ Sbjct: 255 APFRVVNTGGGQPVELMTFVETVEKAVGRPAIHNMLPM-QQGDVPRTFASPDLLEALTGF 313 Query: 486 RPSTDLQTGLKKFVRWYLEYY 424 +PS ++ G+ +FV WY + Y Sbjct: 314 KPSVSVEEGVARFVEWYDQNY 334
>GALE_MOUSE (Q8R059) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 347 Score = 45.4 bits (106), Expect = 2e-04 Identities = 29/73 (39%), Positives = 37/73 (50%) Frame = -2 Query: 657 RTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPS 478 RTYNLG + V Q+V +EK K +VV R GDV +AN SLA ELG+ + Sbjct: 264 RTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAA 322 Query: 477 TDLQTGLKKFVRW 439 L + RW Sbjct: 323 LGLDRMCEDLWRW 335
>GALE_HUMAN (Q14376) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 348 Score = 45.1 bits (105), Expect = 2e-04 Identities = 29/73 (39%), Positives = 37/73 (50%) Frame = -2 Query: 657 RTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPS 478 R YNLG + V Q+V +EK K +VV R GDV +AN SLAQ ELG+ + Sbjct: 265 RIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR-REGDVAACYANPSLAQEELGWTAA 323 Query: 477 TDLQTGLKKFVRW 439 L + RW Sbjct: 324 LGLDRMCEDLWRW 336
>GALE_RAT (P18645) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 347 Score = 43.1 bits (100), Expect = 8e-04 Identities = 28/73 (38%), Positives = 36/73 (49%) Frame = -2 Query: 657 RTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPS 478 R YNLG + V Q+V +EK K +VV R GDV +AN SLA ELG+ + Sbjct: 264 RIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAA 322 Query: 477 TDLQTGLKKFVRW 439 L + RW Sbjct: 323 LGLDRMCEDLWRW 335
>VIPB_SALTI (Q04973) Vi polysaccharide biosynthesis protein vipB/tviC| Length = 348 Score = 40.0 bits (92), Expect = 0.007 Identities = 15/43 (34%), Positives = 30/43 (69%) Frame = -2 Query: 549 RNGDVPYTHANISLAQRELGYRPSTDLQTGLKKFVRWYLEYYN 421 R+GDV ++ A+I+ + L Y P D++ GLK+ ++WY++ ++ Sbjct: 300 RDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHS 342
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/70 (28%), Positives = 37/70 (52%) Frame = -2 Query: 648 NLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPSTDL 469 N+G V +L D+++ + + + PR G+V + +I A+ LG++P DL Sbjct: 231 NIGTGKETSVNELFDIIKHEIGFRG-EAIYDKPREGEVYRIYLDIKKAE-SLGWKPEIDL 288 Query: 468 QTGLKKFVRW 439 + G+K+ V W Sbjct: 289 KEGIKRVVNW 298
>GALE_PASMU (Q9CNY5) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 39.3 bits (90), Expect = 0.011 Identities = 26/89 (29%), Positives = 44/89 (49%) Frame = -2 Query: 681 KKRGPAPFRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQ 502 + G A YNLG S V +V EK+ +K ++V R GD+ +++ SLA+ Sbjct: 249 RHEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIPYKLVDR-RPGDIATCYSDPSLAK 307 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPE 415 EL + + L+ +K W+ + NP+ Sbjct: 308 TELNWTAARGLEQMMKD--TWHWQKKNPK 334
>RFBB_SHIFL (P37777) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 35.0 bits (79), Expect = 0.21 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Frame = -2 Query: 654 TYNLGNTSPVP----VTQLVDLLEKML-KVKAVRRVVKM--PRNGDVPYTHANISLAQRE 496 TYN+G + V + DLL++++ K K+ R + R G + RE Sbjct: 255 TYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADKISRE 314 Query: 495 LGYRPSTDLQTGLKKFVRWYLEYYN 421 LG++P ++G++K V WYL N Sbjct: 315 LGWKPQETFESGIRKTVEWYLANTN 339
>RFBB2_ECOLI (P55293) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 34.7 bits (78), Expect = 0.28 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Frame = -2 Query: 654 TYNLGNTSPVP----VTQLVDLLEKML-KVKAVRRVVKM--PRNGDVPYTHANISLAQRE 496 TYN+G + V + DLL++++ K K+ R + R G + RE Sbjct: 255 TYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADKISRE 314 Query: 495 LGYRPSTDLQTGLKKFVRWYLEYYN 421 LG++P ++G++K V WYL N Sbjct: 315 LGWKPQETFESGIRKTVEWYLANTN 339
>GALE_HAEIN (P24325) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 34.7 bits (78), Expect = 0.28 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 2/86 (2%) Frame = -2 Query: 666 APFRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGY 487 A YNLG V +V EK + ++V+ R+GD+ +++ SLA +ELG+ Sbjct: 254 AGLHIYNLGTGHGYSVLDMVKAFEKANNITIAYKLVER-RSGDIATCYSDPSLAAKELGW 312 Query: 486 RPSTDLQTGLKKFVR--WYLEYYNPE 415 + GL+K ++ W + NP+ Sbjct: 313 ----VAERGLEKMMQDTWNWQKNNPK 334
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 34.7 bits (78), Expect = 0.28 Identities = 23/74 (31%), Positives = 32/74 (43%) Frame = -2 Query: 657 RTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPS 478 R YN+G + + +LV LL + R G + + QRELG+ P+ Sbjct: 237 RVYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPA 296 Query: 477 TDLQTGLKKFVRWY 436 DL GL V WY Sbjct: 297 VDLADGLAATVAWY 310
>CRDL2_MOUSE (Q8VEA6) Chordin-like protein 2 precursor| Length = 426 Score = 34.3 bits (77), Expect = 0.36 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 285 YTPSEEGHPETE*SVILRC--CSCCRSDHVNPCRCYCHAASASQP 413 YTP + HP E + C C+C + HVN R C SQP Sbjct: 40 YTPGQSWHPYLEPQGTIYCVRCTCSENGHVNCYRLRCPPLHCSQP 84
>GALE_DROME (Q9W0P5) Probable UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 350 Score = 33.1 bits (74), Expect = 0.80 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = -2 Query: 660 FRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRP 481 F YNLG V +V EK K V + R+GDV +A+ +LA ++LG++ Sbjct: 267 FFAYNLGTGVGYSVLDMVKAFEKA-SGKKVNYTLVDRRSGDVATCYADATLADKKLGWKA 325 Query: 480 STDLQTGLKKFVRW 439 + + RW Sbjct: 326 ERGIDKMCEDTWRW 339
>RFBB_NEIMA (Q9S642) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 11/86 (12%) Frame = -2 Query: 654 TYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDV-------PYTHANISL---- 508 TYN+G + ++V + +L+ A + + R D+ P A ++ Sbjct: 248 TYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDTAK 307 Query: 507 AQRELGYRPSTDLQTGLKKFVRWYLE 430 +R+LG++P ++GL+K V+WYL+ Sbjct: 308 IRRDLGWQPLETFESGLRKTVQWYLD 333
>CRDL2_HUMAN (Q6WN34) Chordin-like protein 2 precursor (Chordin-related protein| 2) (Breast tumor novel factor 1) (BNF-1) Length = 429 Score = 32.3 bits (72), Expect = 1.4 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 285 YTPSEEGHPETE*SVILRC--CSCCRSDHVNPCRCYCHAASASQP 413 Y+P E HP E ++ C C+C HV+ R +C QP Sbjct: 40 YSPGESWHPYLEPQGLMYCLRCTCSEGAHVSCYRLHCPPVHCPQP 84
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Frame = -2 Query: 663 PFRTYNLGNTSPVPVTQLVDLLEKMLKVKA--------VRRVVKMPRNGDVPYTHANISL 508 P YN+G + V QL L +++K V V P N D+ Y + + Sbjct: 251 PGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTN-DMRYPMKSEKI 309 Query: 507 AQRELGYRPSTDLQTGLKKFVRWYLEYYN 421 LG+RP + G+KK + WY E ++ Sbjct: 310 --HGLGWRPKVPWKEGIKKTIEWYRENFH 336
>GALE2_ARATH (Q9SN58) Probable UDP-glucose 4-epimerase At4g10960 (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 350 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = -2 Query: 651 YNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPSTD 472 YNLG + V ++VD EK K + V+ R GD +A+ A+ EL ++ Sbjct: 264 YNLGTGNGTSVLEMVDAFEK-ASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAKYG 322 Query: 471 LQTGLKKFVRW 439 ++ + W Sbjct: 323 IEEMCRDLWNW 333
>RFBB_SALTY (P26391) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%) Frame = -2 Query: 654 TYNLGNTSPVP----VTQLVDLLEKML-KVKAVRRVVKM--PRNGDVPYTHANISLAQRE 496 TYN+G + V + DLL++++ K + R + R G + RE Sbjct: 255 TYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRE 314 Query: 495 LGYRPSTDLQTGLKKFVRWYL 433 LG++P ++G++K V WYL Sbjct: 315 LGWKPLETFESGIRKTVEWYL 335
>GALE_MYCGE (P47364) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 340 Score = 32.0 bits (71), Expect = 1.8 Identities = 16/80 (20%), Positives = 40/80 (50%) Frame = -2 Query: 660 FRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRP 481 F T+NLG+ +++D+ +K+ + ++ R+ D AN++ A++ ++ Sbjct: 258 FETFNLGSGIGTSNLEVIDIAKKVFYPSRLNLEIRPKRSWDPAILVANVAKAKQTFQFKI 317 Query: 480 STDLQTGLKKFVRWYLEYYN 421 + +L+ + +Y +YN Sbjct: 318 TRNLKDMISDERNFYENFYN 337
>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Frame = -2 Query: 663 PFRTYNLGNTSPVPVTQLVDLLEKMLKVKA--------VRRVVKMPRNGDVPYTHANISL 508 P YN+G + V QL L +++K V V P N D+ Y + + Sbjct: 251 PGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHN-DMRYPMKSEKI 309 Query: 507 AQRELGYRPSTDLQTGLKKFVRWYLEYYN 421 LG++P + G+KK V WY + ++ Sbjct: 310 --HSLGWKPKVPWEEGIKKTVEWYRKNFH 336
>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 338 Score = 32.0 bits (71), Expect = 1.8 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 12/85 (14%) Frame = -2 Query: 651 YNLGN----TSPVPVTQLVDLLEKMLKVKA--------VRRVVKMPRNGDVPYTHANISL 508 YN+G T+ V ++ LLE++ K + VK DV Y+ + S Sbjct: 249 YNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPGHDVRYS-LDCSK 307 Query: 507 AQRELGYRPSTDLQTGLKKFVRWYL 433 ELG++P + GL++ V+WYL Sbjct: 308 IHAELGWQPQITFEQGLRQTVKWYL 332
>RFBB_NEIMB (P55294) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 32.0 bits (71), Expect = 1.8 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 12/87 (13%) Frame = -2 Query: 654 TYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPR------------NGDVPYTHANIS 511 TYN+G + ++V + +L+ A + + R DV Y + + Sbjct: 248 TYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYA-VDAA 306 Query: 510 LAQRELGYRPSTDLQTGLKKFVRWYLE 430 +R+LG+ P ++GL+K V+WYL+ Sbjct: 307 KIRRDLGWLPLETFESGLRKTVQWYLD 333
>UXAB_BACHD (Q9KFI7) Altronate oxidoreductase (EC 1.1.1.58) (Tagaturonate| reductase) (Tagaturonate dehydrogenase) Length = 512 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 409 CEAEAAWQ*QRQGFTWSERQHEQQRKMTDYSVSGWPS 299 C AW ++ FTW ER++E + D V G+PS Sbjct: 193 CRYAKAWNFPQEFFTWLERENEFCHTLVDRIVPGFPS 229
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/73 (26%), Positives = 40/73 (54%) Frame = -2 Query: 648 NLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPSTDL 469 N+G+ S V + +L +L+++++ + + V + P + S Q E+G++P L Sbjct: 251 NVGSGSEVTIKELAELVKEVVGFQG-KLVWDSSKPDGTPRKLMDSSKIQ-EMGWKPKVPL 308 Query: 468 QTGLKKFVRWYLE 430 + GL + +WY+E Sbjct: 309 KEGLVETYKWYVE 321
>RFBB1_ECOLI (P37759) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%) Frame = -2 Query: 654 TYNLGNTSPVP----VTQLVDLLEKML-KVKAVRRVVKM--PRNGDVPYTHANISLAQRE 496 TYN+G + V + DLL++++ K K+ R + R G + R Sbjct: 255 TYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKIGRA 314 Query: 495 LGYRPSTDLQTGLKKFVRWYL 433 LG++P ++G++K V WYL Sbjct: 315 LGWKPQETFESGIRKTVEWYL 335
>GALE3_ARATH (Q9T0A7) Probable UDP-glucose 4-epimerase At4g23920 (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 350 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = -2 Query: 651 YNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPSTD 472 YNLG + V ++V EK K + V+ R GD +A+ A+REL ++ Sbjct: 264 YNLGTGNGTSVLEMVAAFEKA-SGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAKNG 322 Query: 471 LQTGLKKFVRW 439 ++ + W Sbjct: 323 IEEMCRDLWNW 333
>RFBB_NEIGO (P37761) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 346 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 11/86 (12%) Frame = -2 Query: 654 TYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDV-------PYTHANISL---- 508 TYN+G + ++V + +L+ A + + R D+ P A ++ Sbjct: 253 TYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDAAK 312 Query: 507 AQRELGYRPSTDLQTGLKKFVRWYLE 430 +R+LG+ P ++GL+K V+WYL+ Sbjct: 313 IRRDLGWLPLETFESGLRKTVQWYLD 338
>PKHB1_HUMAN (Q9UF11) Pleckstrin homology domain-containing family B member 1| (Pleckstrin homology domain retinal protein 1) (PH domain-containing protein in retina 1) (PHRET1) Length = 243 Score = 31.2 bits (69), Expect = 3.1 Identities = 21/59 (35%), Positives = 26/59 (44%) Frame = -1 Query: 574 CEEGCQDAKEWGCALHACQHQPCTAGAWVPAIH*SPNRAQEVCAVVS*VLQS*VGCEAE 398 C E DA W AL P AGA VP R++ VC+ V V +S C+ E Sbjct: 109 CAETKDDALAWKTALLEANSTPAPAGATVPP------RSRRVCSKVRCVTRSWSPCKVE 161
>SYM_HALMA (Q5V1B3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 717 Score = 30.8 bits (68), Expect = 4.0 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 Query: 610 CGFTGEDAQGEGCEEGCQDAKEWG 539 C + GE A+G+ C+EGCQ E G Sbjct: 150 CPYCGEQARGDECDEGCQRHLEPG 173
>RFBB_RHISN (P55462) Probable dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 30.8 bits (68), Expect = 4.0 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 Query: 504 QRELGYRPSTDLQTGLKKFVRWYLE 430 + ELG++ + TG++K V WYLE Sbjct: 302 ETELGWKAQENFDTGIRKTVEWYLE 326
>ACBB_ACTS5 (Q9ZAE8) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/72 (26%), Positives = 29/72 (40%) Frame = -2 Query: 651 YNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPSTD 472 Y++G +L ++L + + R R G + S ELGYRP D Sbjct: 241 YHIGGGWEATNLELTEILLEACGARRSRISFVTDRKGHDRRYSLDYSKIAGELGYRPRVD 300 Query: 471 LQTGLKKFVRWY 436 G+ + V WY Sbjct: 301 FTDGIAETVAWY 312
>SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis protein spsJ| Length = 315 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/74 (24%), Positives = 35/74 (47%) Frame = -2 Query: 651 YNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPSTD 472 YN+G + +L ++ K L + + V+ + D Y N S + ELG+R Sbjct: 240 YNIGGGNERTNKELASVILKHLGCEELFAHVEDRKGHDRRYA-INASKLKNELGWRQEVT 298 Query: 471 LQTGLKKFVRWYLE 430 + G+ + ++WY + Sbjct: 299 FEEGIARTIQWYTD 312
>RFFG_ECOLI (P27830) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 30.8 bits (68), Expect = 4.0 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYL 433 RELG+ P ++G++K V+WYL Sbjct: 310 RELGWLPQETFESGMRKTVQWYL 332
>GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 339 Score = 30.4 bits (67), Expect = 5.2 Identities = 21/71 (29%), Positives = 32/71 (45%) Frame = -2 Query: 651 YNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPSTD 472 YNLG + V ++V EK+ + R R GD+ A+ + A+RELG+ Sbjct: 258 YNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADR-RPGDIATCFADPAKAKRELGWEAKRG 316 Query: 471 LQTGLKKFVRW 439 L+ RW Sbjct: 317 LEEMCADSWRW 327
>SYM_HALSA (Q9HSA4) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 689 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 Query: 610 CGFTGEDAQGEGCEEGCQDAKEWG 539 C + GE A+G+ C+EGCQ E G Sbjct: 150 CPYCGEHARGDECDEGCQRHLEPG 173
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 30.4 bits (67), Expect = 5.2 Identities = 24/89 (26%), Positives = 41/89 (46%) Frame = -2 Query: 660 FRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRP 481 F N+G+ V + +L +L+++++ K ++V D S LG+ P Sbjct: 247 FEHVNVGSGVEVTIKELAELVKEVVGFKG--KLVWDTTKPDGTPRKLMDSSKLASLGWTP 304 Query: 480 STDLQTGLKKFVRWYLEYYNPELVVKQKQ 394 L+ GL + WYLE VV++KQ Sbjct: 305 KISLKDGLSQTYEWYLEN-----VVQKKQ 328
>EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| Length = 328 Score = 30.4 bits (67), Expect = 5.2 Identities = 21/71 (29%), Positives = 32/71 (45%) Frame = -2 Query: 648 NLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPSTDL 469 NLG + V +L+D +EK+ K + R GD AN A++ LG+ P DL Sbjct: 252 NLGTGTGTTVKELLDAIEKVAK-RPFNIGYAERREGDSTTLVANNDKARQVLGWEPQYDL 310 Query: 468 QTGLKKFVRWY 436 + W+ Sbjct: 311 AAITESAWNWH 321
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 30.0 bits (66), Expect = 6.8 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Frame = -2 Query: 651 YNLGNTSPVPVTQLVDLLEKMLKV---KAVRRVVKMPRNGDVPYTHANISLAQRELGYRP 481 YN+G T V + + + K+ + ++ V P N D Y + L ++LG+ Sbjct: 248 YNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFN-DQRYFLDDQKL--KKLGWCE 304 Query: 480 STDLQTGLKKFVRWYLEYYNPE 415 T+ + GL+K + WY E NPE Sbjct: 305 RTNWEEGLRKTMEWYTE--NPE 324
>SYK_NITEU (Q82SH1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 502 Score = 30.0 bits (66), Expect = 6.8 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -2 Query: 612 LVDLLEKML-----KVKAVRRVVKMPRNGDVPYTHANISLAQRELGYRPS-TDLQTGLKK 451 L+DL E ML KV R+V R D+ A +++AQ L Y P +D Q + Sbjct: 287 LMDLTESMLREVALKVSGTTRIVYQQREMDLAQPFARLTIAQAILKYHPEYSDAQLNDRD 346 Query: 450 FV 445 F+ Sbjct: 347 FL 348
>YBJS_ECOLI (P75821) Hypothetical protein ybjS| Length = 337 Score = 30.0 bits (66), Expect = 6.8 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 26/103 (25%) Frame = -2 Query: 657 RTYNLGN----TSPVPVTQLVDLLEKMLKVKAV---------RRVVKMPRNG--DVPYTH 523 R YN+ N T V +L+D L ++++V R + ++ R + P TH Sbjct: 230 RVYNITNGEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRKSAKEPPLTH 289 Query: 522 ANISL-----------AQRELGYRPSTDLQTGLKKFVRWYLEY 427 +S AQ ELGY+P L G++K W ++ Sbjct: 290 YGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDH 332
>SNX4_PICPA (Q5H7C3) Sorting nexin-4 (Autophagy-related protein 24) (Pexophagy| zeocin-resistent mutant protein 16) Length = 661 Score = 30.0 bits (66), Expect = 6.8 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Frame = -2 Query: 675 RGPAPFRTYNLGNTSPVPVTQLVDLLEKMLKVKAVRRVVKMPRNGDVPYTHANISLAQRE 496 RG P +TY+ GN + + +L + K++ + R VK ++ +T + + + Sbjct: 412 RGKTPGQTYSSGNETNDRINKLNE------KIEFLEREVK--ETFELFHTFEKNLITEYQ 463 Query: 495 LGYRPSTD-LQTGLKKFVRWYLEYYN 421 L R D + T L + ++YL+YYN Sbjct: 464 LFDRIKNDEITTNLHELSQYYLDYYN 489
>IAPL_ASFP5 (P68765) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFM1 (O11452) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFL6 (P69184) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFH8 (P69183) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFE7 (P69182) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFE1 (P69181) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFCH (P68763) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFC3 (O11451) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFC1 (P68764) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121
>IAPL_ASFB7 (P69180) IAP-like protein p27| Length = 224 Score = 29.6 bits (65), Expect = 8.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 501 RELGYRPSTDLQTGLKKFVRWYLEYYNPELVVKQK 397 R G+ +T GLKK + Y +YYN E+ VK K Sbjct: 87 RNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHK 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,333,004 Number of Sequences: 219361 Number of extensions: 1775398 Number of successful extensions: 5416 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 5168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5403 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
