ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 391 e-105
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 391 e-105
3gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome... 391 e-105
4dbj|AK121154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
5gb|DQ333338.1| Oryza sativa (japonica cultivar-group) UDP-glucur... 361 2e-96
6gb|AC118802.7| Rattus norvegicus 13 BAC CH230-72B9 (Children's H... 44 0.60
7gb|DQ377445.1| Alcaligenes faecalis strain GP14 16S ribosomal RN... 44 0.60
8gb|AC111280.7| Rattus norvegicus 13 BAC CH230-51N9 (Children's H... 44 0.60
9emb|AL161612.13| Human DNA sequence from clone RP11-196P2 on chr... 42 2.4
10gb|AC087233.6| Mus Musculus Chromosome 17 RP23-476A24, complete ... 42 2.4
11gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, c... 42 2.4
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
14dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
15dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
16gb|AC006427.13|AC006427 Homo sapiens chromosome 4 clone C0201M04... 42 2.4
17gb|AC006238.1|AC006238 Homo sapiens chromosome 18, clone hRPK.47... 42 2.4
18gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 42 2.4
19emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 42 2.4
20emb|AL596116.14| Mouse DNA sequence from clone RP23-317F9 on chr... 42 2.4
21ref|NM_100080.3| Arabidopsis thaliana GAE2 (UDP-D-GLUCURONATE 4-... 40 9.3
22ref|XM_467453.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
23ref|NM_021742.1| Rattus norvegicus nuclear receptor subfamily 5,... 40 9.3
24gb|AC131694.4| Mus musculus BAC clone RP23-393L24 from chromosom... 40 9.3
25gb|AC092482.71| Mus musculus strain C57BL/6J clone rp23-60j11, c... 40 9.3
26gb|AC111142.16| Mus musculus chromosome 3, clone RP23-370L24, co... 40 9.3
27gb|AC161350.3| Mus musculus chromosome 3, clone RP24-356H12, com... 40 9.3
28gb|AC150981.14| Medicago truncatula clone mth2-166m22, complete ... 40 9.3
29emb|AJ507398.1|HSA507398 Homo sapiens RINZFC gene for putative R... 40 9.3
30gb|AC009812.17| Homo sapiens chromosome 8, clone RP11-48B3, comp... 40 9.3
31emb|BX005003.10| Zebrafish DNA sequence from clone DKEY-241F8 in... 40 9.3
32emb|AJ621745.1| Gallus gallus partial FACL6 gene for fatty acid ... 40 9.3
33gb|AC118207.13| Mus musculus chromosome 8, clone RP24-215A12, co... 40 9.3
34gb|AC025188.8| Homo sapiens chromosome 5 clone CTD-2384B11, comp... 40 9.3
35gb|AF334734.1| Arabidopsis thaliana clone C00181 (e) putative nu... 40 9.3
36gb|AC103586.3| Homo sapiens chromosome 3 clone RP11-79P21, compl... 40 9.3
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
38emb|BX813557.1|CNS0AC73 Arabidopsis thaliana Full-length cDNA Co... 40 9.3
39emb|BX813542.1|CNS0AC0G Arabidopsis thaliana Full-length cDNA Co... 40 9.3
40emb|BX817111.1|CNS0ABKC Arabidopsis thaliana Full-length cDNA Co... 40 9.3
41emb|BX815155.1|CNS0AAH1 Arabidopsis thaliana Full-length cDNA Co... 40 9.3
42gb|AC020622.3|F22M8 Sequence of BAC F22M8 from Arabidopsis thali... 40 9.3
43gb|AC025259.49| Homo sapiens 12 BAC RP11-1100L3 (Roswell Park Ca... 40 9.3
44gb|AY084754.1| Arabidopsis thaliana clone 116833 mRNA, complete ... 40 9.3
45gb|AC106890.2| Homo sapiens BAC clone RP11-7D20 from 2, complete... 40 9.3
46gb|AC069298.8|AC069298 Homo sapiens chromosome 3 clone RP11-56K2... 40 9.3
47dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.3
48dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
49dbj|AK070279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
50emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on ch... 40 9.3
51gb|AC167249.2| Mus musculus BAC clone RP23-41C8 from chromosome ... 40 9.3
52emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in li... 40 9.3
53emb|AL772242.7| Mouse DNA sequence from clone RP23-15E4 on chrom... 40 9.3
54dbj|AB012961.1| Rattus norvegicus mRNA for FTZ-F1 beta2, complet... 40 9.3
55dbj|AB012960.1| Rattus norvegicus mRNA for FTZ-F1 beta1, complet... 40 9.3 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  391 bits (197), Expect = e-105
 Identities = 374/431 (86%), Gaps = 4/431 (0%)
 Strand = Plus / Minus

                                                                           
Query: 253     ctgatgaatcaagtactgga-ctagaactctgatacacaccgtcagaagagggccatcca 311
               ||||||| | ||| |||||| |||||||  |||||||||||||||||||| ||||||  |
Sbjct: 7861865 ctgatgagttaagcactggatctagaacaatgatacacaccgtcagaagaaggccatgaa 7861806

                                                                           
Query: 312     gaaactgaatagtcagtcatcttgcgctgctgctcgtgctgccgttccgaccacgtgaac 371
               |||| ||||||  || ||||||||| |||||    ||| ||||  ||||||| || ||| 
Sbjct: 7861805 gaaaatgaatatccaatcatcttgcactgctt---gtgttgccactccgacctcgcgaag 7861749

                                                                           
Query: 372     ccttgccgttgctactgccatgctgcttctgcttcacaaccaactcaggattgtagtact 431
                ||||| |||||||||||||||||||||||||||  || | ||| ||||  |||||||||
Sbjct: 7861748 acttgctgttgctactgccatgctgcttctgcttaccagcaaacccaggcatgtagtact 7861689

                                                                           
Query: 432     caagataccaccgcacaaacttcttgagccctgtttggagatcagtggatggccggtacc 491
               | ||||||||||||||||||||||| | ||||||||| |||||||| || || |||||||
Sbjct: 7861688 cgagataccaccgcacaaacttcttaacccctgtttgaagatcagttgacggtcggtacc 7861629

                                                                           
Query: 492     caagctcccgctgtgcaaggctgatgttggcatgcgtgtagggcacatccccattccttg 551
               ||||||||||||| ||||| |||||||| ||||| || || |||||||| ||||||||||
Sbjct: 7861628 caagctcccgctgagcaagactgatgttagcatgtgtatatggcacatcaccattccttg 7861569

                                                                           
Query: 552     gcatcttgacaaccctcctcacagccttcaccttgagcatcttctccagtaaatccacaa 611
               |||||||||||| | ||||||| || ||||||||||||| |||||||||||||||||| |
Sbjct: 7861568 gcatcttgacaatcttcctcaccgctttcaccttgagcaacttctccagtaaatccacca 7861509

                                                                           
Query: 612     gctgtgtcaccggcactggagaagtgttccccaaattgtatgtcctgaatggcgctggcc 671
               |||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 7861508 gctgtgtcaccggcacaggagatgtgttccccaaattgtatgtcctgaatggtgccggcc 7861449

                          
Query: 672     ctcgcttcttg 682
               |||||||||||
Sbjct: 7861448 ctcgcttcttg 7861438



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                           
Query: 6       tacttccttctctctcgtggtacaaa-tgtcactaaaagaatctatcgtagtctttgcaa 64
               |||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 7862117 tacttccttctctcccgtggtacaaaatgtcactaaaagaatctattatagtctttgcaa 7862058

                        
Query: 65      tgcacagcc 73
                 |||||||
Sbjct: 7862057 ctcacagcc 7862049



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 109     tgtcatcctaagaaccaactaatggaactagg 140
               ||||||||||||||||| ||||||||||||||
Sbjct: 7862015 tgtcatcctaagaaccagctaatggaactagg 7861984
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  391 bits (197), Expect = e-105
 Identities = 374/431 (86%), Gaps = 4/431 (0%)
 Strand = Plus / Minus

                                                                           
Query: 253     ctgatgaatcaagtactgga-ctagaactctgatacacaccgtcagaagagggccatcca 311
               ||||||| | ||| |||||| |||||||  |||||||||||||||||||| ||||||  |
Sbjct: 7859700 ctgatgagttaagcactggatctagaacaatgatacacaccgtcagaagaaggccatgaa 7859641

                                                                           
Query: 312     gaaactgaatagtcagtcatcttgcgctgctgctcgtgctgccgttccgaccacgtgaac 371
               |||| ||||||  || ||||||||| |||||    ||| ||||  ||||||| || ||| 
Sbjct: 7859640 gaaaatgaatatccaatcatcttgcactgctt---gtgttgccactccgacctcgcgaag 7859584

                                                                           
Query: 372     ccttgccgttgctactgccatgctgcttctgcttcacaaccaactcaggattgtagtact 431
                ||||| |||||||||||||||||||||||||||  || | ||| ||||  |||||||||
Sbjct: 7859583 acttgctgttgctactgccatgctgcttctgcttaccagcaaacccaggcatgtagtact 7859524

                                                                           
Query: 432     caagataccaccgcacaaacttcttgagccctgtttggagatcagtggatggccggtacc 491
               | ||||||||||||||||||||||| | ||||||||| |||||||| || || |||||||
Sbjct: 7859523 cgagataccaccgcacaaacttcttaacccctgtttgaagatcagttgacggtcggtacc 7859464

                                                                           
Query: 492     caagctcccgctgtgcaaggctgatgttggcatgcgtgtagggcacatccccattccttg 551
               ||||||||||||| ||||| |||||||| ||||| || || |||||||| ||||||||||
Sbjct: 7859463 caagctcccgctgagcaagactgatgttagcatgtgtatatggcacatcaccattccttg 7859404

                                                                           
Query: 552     gcatcttgacaaccctcctcacagccttcaccttgagcatcttctccagtaaatccacaa 611
               |||||||||||| | ||||||| || ||||||||||||| |||||||||||||||||| |
Sbjct: 7859403 gcatcttgacaatcttcctcaccgctttcaccttgagcaacttctccagtaaatccacca 7859344

                                                                           
Query: 612     gctgtgtcaccggcactggagaagtgttccccaaattgtatgtcctgaatggcgctggcc 671
               |||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 7859343 gctgtgtcaccggcacaggagatgtgttccccaaattgtatgtcctgaatggtgccggcc 7859284

                          
Query: 672     ctcgcttcttg 682
               |||||||||||
Sbjct: 7859283 ctcgcttcttg 7859273



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                           
Query: 6       tacttccttctctctcgtggtacaaa-tgtcactaaaagaatctatcgtagtctttgcaa 64
               |||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 7859952 tacttccttctctcccgtggtacaaaatgtcactaaaagaatctattatagtctttgcaa 7859893

                        
Query: 65      tgcacagcc 73
                 |||||||
Sbjct: 7859892 ctcacagcc 7859884



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 109     tgtcatcctaagaaccaactaatggaactagg 140
               ||||||||||||||||| ||||||||||||||
Sbjct: 7859850 tgtcatcctaagaaccagctaatggaactagg 7859819
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>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030J04, complete sequence
          Length = 153431

 Score =  391 bits (197), Expect = e-105
 Identities = 374/431 (86%), Gaps = 4/431 (0%)
 Strand = Plus / Minus

                                                                         
Query: 253   ctgatgaatcaagtactgga-ctagaactctgatacacaccgtcagaagagggccatcca 311
             ||||||| | ||| |||||| |||||||  |||||||||||||||||||| ||||||  |
Sbjct: 47463 ctgatgagttaagcactggatctagaacaatgatacacaccgtcagaagaaggccatgaa 47404

                                                                         
Query: 312   gaaactgaatagtcagtcatcttgcgctgctgctcgtgctgccgttccgaccacgtgaac 371
             |||| ||||||  || ||||||||| |||||    ||| ||||  ||||||| || ||| 
Sbjct: 47403 gaaaatgaatatccaatcatcttgcactgctt---gtgttgccactccgacctcgcgaag 47347

                                                                         
Query: 372   ccttgccgttgctactgccatgctgcttctgcttcacaaccaactcaggattgtagtact 431
              ||||| |||||||||||||||||||||||||||  || | ||| ||||  |||||||||
Sbjct: 47346 acttgctgttgctactgccatgctgcttctgcttaccagcaaacccaggcatgtagtact 47287

                                                                         
Query: 432   caagataccaccgcacaaacttcttgagccctgtttggagatcagtggatggccggtacc 491
             | ||||||||||||||||||||||| | ||||||||| |||||||| || || |||||||
Sbjct: 47286 cgagataccaccgcacaaacttcttaacccctgtttgaagatcagttgacggtcggtacc 47227

                                                                         
Query: 492   caagctcccgctgtgcaaggctgatgttggcatgcgtgtagggcacatccccattccttg 551
             ||||||||||||| ||||| |||||||| ||||| || || |||||||| ||||||||||
Sbjct: 47226 caagctcccgctgagcaagactgatgttagcatgtgtatatggcacatcaccattccttg 47167

                                                                         
Query: 552   gcatcttgacaaccctcctcacagccttcaccttgagcatcttctccagtaaatccacaa 611
             |||||||||||| | ||||||| || ||||||||||||| |||||||||||||||||| |
Sbjct: 47166 gcatcttgacaatcttcctcaccgctttcaccttgagcaacttctccagtaaatccacca 47107

                                                                         
Query: 612   gctgtgtcaccggcactggagaagtgttccccaaattgtatgtcctgaatggcgctggcc 671
             |||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 47106 gctgtgtcaccggcacaggagatgtgttccccaaattgtatgtcctgaatggtgccggcc 47047

                        
Query: 672   ctcgcttcttg 682
             |||||||||||
Sbjct: 47046 ctcgcttcttg 47036



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                         
Query: 6     tacttccttctctctcgtggtacaaa-tgtcactaaaagaatctatcgtagtctttgcaa 64
             |||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 47715 tacttccttctctcccgtggtacaaaatgtcactaaaagaatctattatagtctttgcaa 47656

                      
Query: 65    tgcacagcc 73
               |||||||
Sbjct: 47655 ctcacagcc 47647



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 109   tgtcatcctaagaaccaactaatggaactagg 140
             ||||||||||||||||| ||||||||||||||
Sbjct: 47613 tgtcatcctaagaaccagctaatggaactagg 47582
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>dbj|AK121154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O05, full
            insert sequence
          Length = 1956

 Score =  391 bits (197), Expect = e-105
 Identities = 374/431 (86%), Gaps = 4/431 (0%)
 Strand = Plus / Minus

                                                                        
Query: 253  ctgatgaatcaagtactgga-ctagaactctgatacacaccgtcagaagagggccatcca 311
            ||||||| | ||| |||||| |||||||  |||||||||||||||||||| ||||||  |
Sbjct: 1594 ctgatgagttaagcactggatctagaacaatgatacacaccgtcagaagaaggccatgaa 1535

                                                                        
Query: 312  gaaactgaatagtcagtcatcttgcgctgctgctcgtgctgccgttccgaccacgtgaac 371
            |||| ||||||  || ||||||||| |||||    ||| ||||  ||||||| || ||| 
Sbjct: 1534 gaaaatgaatatccaatcatcttgcactgctt---gtgttgccactccgacctcgcgaag 1478

                                                                        
Query: 372  ccttgccgttgctactgccatgctgcttctgcttcacaaccaactcaggattgtagtact 431
             ||||| |||||||||||||||||||||||||||  || | ||| ||||  |||||||||
Sbjct: 1477 acttgctgttgctactgccatgctgcttctgcttaccagcaaacccaggcatgtagtact 1418

                                                                        
Query: 432  caagataccaccgcacaaacttcttgagccctgtttggagatcagtggatggccggtacc 491
            | ||||||||||||||||||||||| | ||||||||| |||||||| || || |||||||
Sbjct: 1417 cgagataccaccgcacaaacttcttaacccctgtttgaagatcagttgacggtcggtacc 1358

                                                                        
Query: 492  caagctcccgctgtgcaaggctgatgttggcatgcgtgtagggcacatccccattccttg 551
            ||||||||||||| ||||| |||||||| ||||| || || |||||||| ||||||||||
Sbjct: 1357 caagctcccgctgagcaagactgatgttagcatgtgtatatggcacatcaccattccttg 1298

                                                                        
Query: 552  gcatcttgacaaccctcctcacagccttcaccttgagcatcttctccagtaaatccacaa 611
            |||||||||||| | ||||||| || ||||||||||||| |||||||||||||||||| |
Sbjct: 1297 gcatcttgacaatcttcctcaccgctttcaccttgagcaacttctccagtaaatccacca 1238

                                                                        
Query: 612  gctgtgtcaccggcactggagaagtgttccccaaattgtatgtcctgaatggcgctggcc 671
            |||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 1237 gctgtgtcaccggcacaggagatgtgttccccaaattgtatgtcctgaatggtgccggcc 1178

                       
Query: 672  ctcgcttcttg 682
            |||||||||||
Sbjct: 1177 ctcgcttcttg 1167



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                        
Query: 6    tacttccttctctctcgtggtacaaa-tgtcactaaaagaatctatcgtagtctttgcaa 64
            |||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 1846 tacttccttctctcccgtggtacaaaatgtcactaaaagaatctattatagtctttgcaa 1787

                     
Query: 65   tgcacagcc 73
              |||||||
Sbjct: 1786 ctcacagcc 1778



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 109  tgtcatcctaagaaccaactaatggaactagg 140
            ||||||||||||||||| ||||||||||||||
Sbjct: 1744 tgtcatcctaagaaccagctaatggaactagg 1713
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>gb|DQ333338.1| Oryza sativa (japonica cultivar-group) UDP-glucuronic acid
            4-epimerase isoform 1 mRNA, complete cds
          Length = 1455

 Score =  361 bits (182), Expect = 2e-96
 Identities = 278/310 (89%)
 Strand = Plus / Minus

                                                                        
Query: 373  cttgccgttgctactgccatgctgcttctgcttcacaaccaactcaggattgtagtactc 432
            ||||| |||||||||||||||||||||||||||  || | ||| ||||  ||||||||||
Sbjct: 1413 cttgctgttgctactgccatgctgcttctgcttaccagcaaacccaggcatgtagtactc 1354

                                                                        
Query: 433  aagataccaccgcacaaacttcttgagccctgtttggagatcagtggatggccggtaccc 492
             ||||||||||||||||||||||| | ||||||||| |||||||| || || ||||||||
Sbjct: 1353 gagataccaccgcacaaacttcttaacccctgtttgaagatcagttgacggtcggtaccc 1294

                                                                        
Query: 493  aagctcccgctgtgcaaggctgatgttggcatgcgtgtagggcacatccccattccttgg 552
            |||||||||||| ||||| |||||||| ||||| || || |||||||| |||||||||||
Sbjct: 1293 aagctcccgctgagcaagactgatgttagcatgtgtatatggcacatcaccattccttgg 1234

                                                                        
Query: 553  catcttgacaaccctcctcacagccttcaccttgagcatcttctccagtaaatccacaag 612
            ||||||||||| | ||||||| || ||||||||||||| |||||||||||||||||| ||
Sbjct: 1233 catcttgacaatcttcctcaccgctttcaccttgagcaacttctccagtaaatccaccag 1174

                                                                        
Query: 613  ctgtgtcaccggcactggagaagtgttccccaaattgtatgtcctgaatggcgctggccc 672
            ||||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||
Sbjct: 1173 ctgtgtcaccggcacaggagatgtgttccccaaattgtatgtcctgaatggtgccggccc 1114

                      
Query: 673  tcgcttcttg 682
            ||||||||||
Sbjct: 1113 tcgcttcttg 1104
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>gb|AC118802.7| Rattus norvegicus 13 BAC CH230-72B9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 239935

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 619    caccggcactggagaagtgttc 640
              ||||||||||||||||||||||
Sbjct: 125393 caccggcactggagaagtgttc 125372
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>gb|DQ377445.1| Alcaligenes faecalis strain GP14 16S ribosomal RNA gene, partial
           sequence
          Length = 374

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 337 gctgctgctcgtgctgccgttc 358
           ||||||||||||||||||||||
Sbjct: 41  gctgctgctcgtgctgccgttc 20
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>gb|AC111280.7| Rattus norvegicus 13 BAC CH230-51N9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216192

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 619   caccggcactggagaagtgttc 640
             ||||||||||||||||||||||
Sbjct: 12005 caccggcactggagaagtgttc 11984
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>emb|AL161612.13| Human DNA sequence from clone RP11-196P2 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 160145

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     ccccaaaatgattgaataatc 98
              |||||||||||||||||||||
Sbjct: 125743 ccccaaaatgattgaataatc 125723
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>gb|AC087233.6| Mus Musculus Chromosome 17 RP23-476A24, complete sequence
          Length = 165330

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 619    caccggcactggagaagtgttcccc 643
              |||||||| ||||||||||||||||
Sbjct: 133949 caccggcaatggagaagtgttcccc 133925
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>gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, complete sequence
          Length = 223552

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 619    caccggcactggagaagtgttcccc 643
              |||||||| ||||||||||||||||
Sbjct: 193377 caccggcaatggagaagtgttcccc 193401
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 615      gtgtcaccggcactggagaag 635
                |||||||||||||||||||||
Sbjct: 19214515 gtgtcaccggcactggagaag 19214535
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 615      gtgtcaccggcactggagaag 635
                |||||||||||||||||||||
Sbjct: 18573804 gtgtcaccggcactggagaag 18573784
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>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0671F11
          Length = 159409

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 615    gtgtcaccggcactggagaag 635
              |||||||||||||||||||||
Sbjct: 155827 gtgtcaccggcactggagaag 155807
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>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1756_G07
          Length = 149457

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 615  gtgtcaccggcactggagaag 635
            |||||||||||||||||||||
Sbjct: 1074 gtgtcaccggcactggagaag 1054
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>gb|AC006427.13|AC006427 Homo sapiens chromosome 4 clone C0201M04, complete sequence
          Length = 178524

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 170    agaagcaacagttttcaacactaac 194
              |||||| ||||||||||||||||||
Sbjct: 167638 agaagctacagttttcaacactaac 167662
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>gb|AC006238.1|AC006238 Homo sapiens chromosome 18, clone hRPK.474_N_24, complete sequence
          Length = 211945

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 94     taatcttcctagcagtgtcat 114
              |||||||||||||||||||||
Sbjct: 140340 taatcttcctagcagtgtcat 140360
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 338     ctgctgctcgtgctgccgttc 358
               |||||||||||||||||||||
Sbjct: 2061385 ctgctgctcgtgctgccgttc 2061405
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
              complete sequence
          Length = 151936

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 615    gtgtcaccggcactggagaag 635
              |||||||||||||||||||||
Sbjct: 148037 gtgtcaccggcactggagaag 148057
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>emb|AL596116.14| Mouse DNA sequence from clone RP23-317F9 on chromosome 11, complete
              sequence
          Length = 217735

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 565    cctcctcacagccttcacctt 585
              |||||||||||||||||||||
Sbjct: 132800 cctcctcacagccttcacctt 132820
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>ref|NM_100080.3| Arabidopsis thaliana GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2); NAD
            binding / catalytic AT1G02000 (GAE2) mRNA, complete cds
          Length = 1781

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 617  gtcaccggcactggagaagtgttcccca 644
            ||||||||||| ||||| ||||||||||
Sbjct: 1316 gtcaccggcaccggagatgtgttcccca 1289
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>ref|XM_467453.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2187

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 566  ctcctcacagccttcaccttgagcatct 593
            ||||||||||| ||||||||| ||||||
Sbjct: 1177 ctcctcacagctttcaccttgggcatct 1204
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>ref|NM_021742.1| Rattus norvegicus nuclear receptor subfamily 5, group A, member 2
            (Nr5a2), mRNA
          Length = 1931

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 528  tgtagggcacatccccattc 547
            ||||||||||||||||||||
Sbjct: 1732 tgtagggcacatccccattc 1713
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>gb|AC131694.4| Mus musculus BAC clone RP23-393L24 from chromosome 6, complete sequence
          Length = 187925

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 624    gcactggagaagtgttcccc 643
              ||||||||||||||||||||
Sbjct: 103858 gcactggagaagtgttcccc 103839
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>gb|AC092482.71| Mus musculus strain C57BL/6J clone rp23-60j11, complete sequence
          Length = 220334

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    agagggccatccagaaactg 318
              ||||||||||||||||||||
Sbjct: 108235 agagggccatccagaaactg 108216
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>gb|AC111142.16| Mus musculus chromosome 3, clone RP23-370L24, complete sequence
          Length = 171774

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 624   gcactggagaagtgttcccc 643
             ||||||||||||||||||||
Sbjct: 81360 gcactggagaagtgttcccc 81341
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>gb|AC161350.3| Mus musculus chromosome 3, clone RP24-356H12, complete sequence
          Length = 156180

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 624   gcactggagaagtgttcccc 643
             ||||||||||||||||||||
Sbjct: 29641 gcactggagaagtgttcccc 29660
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>gb|AC150981.14| Medicago truncatula clone mth2-166m22, complete sequence
          Length = 116485

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 118   aagaaccaactaatggaactagggagtg 145
             |||||||||| |||||||||||| ||||
Sbjct: 27884 aagaaccaaccaatggaactaggaagtg 27857
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>emb|AJ507398.1|HSA507398 Homo sapiens RINZFC gene for putative RIN zinc finger protein, exons
             1-6
          Length = 39160

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 170   agaagcaacagttttcaacactaa 193
             |||||||| |||||||||||||||
Sbjct: 12456 agaagcaaaagttttcaacactaa 12433
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>gb|AC009812.17| Homo sapiens chromosome 8, clone RP11-48B3, complete sequence
          Length = 155405

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   agaagcaacagttttcaacactaa 193
             |||||||| |||||||||||||||
Sbjct: 77199 agaagcaaaagttttcaacactaa 77222
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>emb|BX005003.10| Zebrafish DNA sequence from clone DKEY-241F8 in linkage group 13,
              complete sequence
          Length = 172889

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    tgcttcacaaccaactcagg 420
              ||||||||||||||||||||
Sbjct: 102014 tgcttcacaaccaactcagg 101995
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>emb|AJ621745.1| Gallus gallus partial FACL6 gene for fatty acid Coenzyme A ligase, long
             chain 6, exons 10-20, BAC bCHORI92M14 clone, contig 6
          Length = 24205

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   atgctgcttctgcttcacaa 410
             ||||||||||||||||||||
Sbjct: 16709 atgctgcttctgcttcacaa 16728
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>gb|AC118207.13| Mus musculus chromosome 8, clone RP24-215A12, complete sequence
          Length = 187453

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    ctttgcaatgcacagcccgc 76
             ||||||||||||||||||||
Sbjct: 27760 ctttgcaatgcacagcccgc 27741
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>gb|AC025188.8| Homo sapiens chromosome 5 clone CTD-2384B11, complete sequence
          Length = 143335

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 530    tagggcacatccccattcct 549
              ||||||||||||||||||||
Sbjct: 104341 tagggcacatccccattcct 104322
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>gb|AF334734.1| Arabidopsis thaliana clone C00181 (e) putative nucleotide sugar
            epimerase (At1g02000) mRNA, complete cds
          Length = 1305

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 617  gtcaccggcactggagaagtgttcccca 644
            ||||||||||| ||||| ||||||||||
Sbjct: 1076 gtcaccggcaccggagatgtgttcccca 1049
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>gb|AC103586.3| Homo sapiens chromosome 3 clone RP11-79P21, complete sequence
          Length = 174912

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   tgtgcaaggctgatgttggc 522
             ||||||||||||||||||||
Sbjct: 40471 tgtgcaaggctgatgttggc 40452
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 566      ctcctcacagccttcaccttgagcatct 593
                ||||||||||| ||||||||| ||||||
Sbjct: 29624676 ctcctcacagctttcaccttgggcatct 29624649
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>emb|BX813557.1|CNS0AC73 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB24ZD12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1545

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 617  gtcaccggcactggagaagtgttcccca 644
            ||||||||||| ||||| ||||||||||
Sbjct: 1179 gtcaccggcaccggagatgtgttcccca 1152
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>emb|BX813542.1|CNS0AC0G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB23ZC03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1602

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 617  gtcaccggcactggagaagtgttcccca 644
            ||||||||||| ||||| ||||||||||
Sbjct: 1233 gtcaccggcaccggagatgtgttcccca 1206
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>emb|BX817111.1|CNS0ABKC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH86ZA02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1602

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 617  gtcaccggcactggagaagtgttcccca 644
            ||||||||||| ||||| ||||||||||
Sbjct: 1316 gtcaccggcaccggagatgtgttcccca 1289
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>emb|BX815155.1|CNS0AAH1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS39ZA12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1679

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 617  gtcaccggcactggagaagtgttcccca 644
            ||||||||||| ||||| ||||||||||
Sbjct: 1307 gtcaccggcaccggagatgtgttcccca 1280
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>gb|AC020622.3|F22M8 Sequence of BAC F22M8 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 47295

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 617   gtcaccggcactggagaagtgttcccca 644
             ||||||||||| ||||| ||||||||||
Sbjct: 42328 gtcaccggcaccggagatgtgttcccca 42301
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>gb|AC025259.49| Homo sapiens 12 BAC RP11-1100L3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 212622

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   tgaatagtcagtcatcttgc 336
             ||||||||||||||||||||
Sbjct: 84491 tgaatagtcagtcatcttgc 84472
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>gb|AY084754.1| Arabidopsis thaliana clone 116833 mRNA, complete sequence
          Length = 1662

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 617  gtcaccggcactggagaagtgttcccca 644
            ||||||||||| ||||| ||||||||||
Sbjct: 1262 gtcaccggcaccggagatgtgttcccca 1235
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>gb|AC106890.2| Homo sapiens BAC clone RP11-7D20 from 2, complete sequence
          Length = 31135

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   ctgcttcacaaccaactcag 419
             ||||||||||||||||||||
Sbjct: 26084 ctgcttcacaaccaactcag 26103
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>gb|AC069298.8|AC069298 Homo sapiens chromosome 3 clone RP11-56K23, complete sequence
          Length = 158073

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   tgtgcaaggctgatgttggc 522
             ||||||||||||||||||||
Sbjct: 78561 tgtgcaaggctgatgttggc 78542
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     cttgcgctgctgctcgtgct 351
               ||||||||||||||||||||
Sbjct: 5033478 cttgcgctgctgctcgtgct 5033459
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>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1479_B12
          Length = 127089

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 566   ctcctcacagccttcaccttgagcatct 593
             ||||||||||| ||||||||| ||||||
Sbjct: 82397 ctcctcacagctttcaccttgggcatct 82370
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>dbj|AK070279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A11, full
            insert sequence
          Length = 2186

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 566  ctcctcacagccttcaccttgagcatct 593
            ||||||||||| ||||||||| ||||||
Sbjct: 1176 ctcctcacagctttcaccttgggcatct 1203
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>emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on chromosome 2, complete
              sequence
          Length = 230213

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     tacaaatgtcactaaaagaa 45
              ||||||||||||||||||||
Sbjct: 174972 tacaaatgtcactaaaagaa 174953
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>gb|AC167249.2| Mus musculus BAC clone RP23-41C8 from chromosome 17, complete sequence
          Length = 200132

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    agagggccatccagaaactg 318
              ||||||||||||||||||||
Sbjct: 110549 agagggccatccagaaactg 110530
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>emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in linkage group 15,
             complete sequence
          Length = 224998

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   gaagcaacagttttcaacac 190
             ||||||||||||||||||||
Sbjct: 98958 gaagcaacagttttcaacac 98939
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>emb|AL772242.7| Mouse DNA sequence from clone RP23-15E4 on chromosome 2, complete
             sequence
          Length = 196548

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   tagaactctgatacacaccg 293
             ||||||||||||||||||||
Sbjct: 44100 tagaactctgatacacaccg 44081
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>dbj|AB012961.1| Rattus norvegicus mRNA for FTZ-F1 beta2, complete cds
          Length = 1868

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 528  tgtagggcacatccccattc 547
            ||||||||||||||||||||
Sbjct: 1669 tgtagggcacatccccattc 1650
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>dbj|AB012960.1| Rattus norvegicus mRNA for FTZ-F1 beta1, complete cds
          Length = 1931

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 528  tgtagggcacatccccattc 547
            ||||||||||||||||||||
Sbjct: 1732 tgtagggcacatccccattc 1713


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,762,492
Number of Sequences: 3902068
Number of extensions: 5762492
Number of successful extensions: 143820
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143512
Number of HSP's gapped (non-prelim): 300
length of query: 682
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 659
effective length of database: 17,143,297,704
effective search space: 11297433186936
effective search space used: 11297433186936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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