| Clone Name | rbags32m09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008972.1| Triticum aestivum clone wdk1c.pk024.f3:fis, full insert mRNA sequence Length = 1788 Score = 841 bits (424), Expect = 0.0 Identities = 454/464 (97%) Strand = Plus / Minus Query: 224 cctttatccccaactacctgacatgtgccttactctcgctcaatctgaatggtcacatga 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1545 cctttatccccaactacctgacatgtgccttactctcgctcaatctgaatggtcacatga 1486 Query: 284 ctgatgttgtactctgccttgatgtacccaatgaccttgtcaagcattttatcagcatcc 343 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1485 ctgatgttgtactctgccttgatgtacccaatgaccttgtcaagcattttatcagcatca 1426 Query: 344 acatcctgcgtgatcgtcacatggcatgccaagagcaccttccccactgtgatagcccag 403 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1425 gcatcctgcgtgatcgtcacatggcatgccaagagcaccttccccactgtgatagcccag 1366 Query: 404 atgtgcagctcatggacagcaatcacaccttccatctcacggagaccagtctcaagcctg 463 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 1365 atgtgcagctcatggacagcaatcacaccttccatctcacggagaccactttcaagcctg 1306 Query: 464 gtggcatcgatctcgcggggcgtgctctccataaggacttcaagtatgttccgaatcatc 523 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1305 gtggcgtcgatctcgcggggcgtgctctccataaggacctcaagtatgttccgaatcatc 1246 Query: 524 ttgattgtggtgaacagtacaatcacagagaagatgagggtgcatatgagatcaataatc 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1245 ttgattgtggtgaacagtacaatcacagagaagatgagggtgcatatgagatcaataatc 1186 Query: 584 ttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctggatg 643 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 1185 ttccattcgggcttgtaccagatgagagcccctccaatcattacgccgatgctctggatg 1126 Query: 644 gagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 1125 gagtccccaattacatgcagataggcactgtgaacattgatgtt 1082 Score = 228 bits (115), Expect = 2e-56 Identities = 182/200 (91%), Gaps = 7/200 (3%) Strand = Plus / Minus Query: 23 aaaaattgtctggaaattgcatccatgtgagaatacaaacgactac-atcacccgattaa 81 |||| ||||||||||||||||||||||||| ||||||||||||| | ||||||| | Sbjct: 1749 aaaatttgtctggaaattgcatccatgtga--atacaaacgactaggaccacccga---a 1695 Query: 82 tagttcattaaactaatgggctaatgaaaacgcgtacatataatattttctccagcacca 141 ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1694 tagttcattcaactaatgggctaacgaaaacgcgtacatataatattt-ctccagcacca 1636 Query: 142 aaggcaacagctagatgaacctgcaacgcctttgcgtgtgcaaagctaacattaaccgca 201 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| Sbjct: 1635 aaggcaacagctagatgaacctgcaacgcctttgcaagtgcaagtctaacattaactgca 1576 Query: 202 ttaagatgataaaccgttaa 221 ||||||||||| |||||||| Sbjct: 1575 ttaagatgatagaccgttaa 1556
>gb|BT009341.1| Triticum aestivum clone wlm4.pk0016.h1:fis, full insert mRNA sequence Length = 790 Score = 833 bits (420), Expect = 0.0 Identities = 453/464 (97%) Strand = Plus / Minus Query: 224 cctttatccccaactacctgacatgtgccttactctcgctcaatctgaatggtcacatga 283 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 cctttatcctcaactacctgacatgtgccttactctcgctcaatctgaatggtcacatga 446 Query: 284 ctgatgttgtactctgccttgatgtacccaatgaccttgtcaagcattttatcagcatcc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 ctgatgttgtactctgccttgatgtacccaatgaccttgtcaagcattttatcagcatcc 386 Query: 344 acatcctgcgtgatcgtcacatggcatgccaagagcaccttccccactgtgatagcccag 403 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gcatcctgcgtgatcgtcacatggcatgccaagagcaccttccccactgtgatagcccag 326 Query: 404 atgtgcagctcatggacagcaatcacaccttccatctcacggagaccagtctcaagcctg 463 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 325 atgtgcagctcatggaccgcaatcacaccttccatctcacggagaccactctcaagcctg 266 Query: 464 gtggcatcgatctcgcggggcgtgctctccataaggacttcaagtatgttccgaatcatc 523 |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 265 gtggcatcgatctcacggggcgtgctctccataagaacttccagtatgttccgaatcatc 206 Query: 524 ttgattgtggtgaacagtacaatcacagagaagatgagggtgcatatgagatcaataatc 583 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 ctgattgtggtgaacagtacaatcacagagaagatgagggtgcatatgagatcaataatc 146 Query: 584 ttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctggatg 643 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 145 ttccattcgggcttgtaccagatgagagcccctccaatcattacaccgatgctctggatg 86 Query: 644 gagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 85 gagtccccaattacatgcagataggcactgtgaacattgatgtt 42 Score = 226 bits (114), Expect = 8e-56 Identities = 166/181 (91%), Gaps = 3/181 (1%) Strand = Plus / Minus Query: 23 aaaaattgtctggaaattgcatccatgtgagaatacaaacgactacatcacccgattaat 82 ||||| |||||| ||||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 711 aaaaactgtctgaaaattgcatccatgtga--atataaacgactacaccacccgtttaat 654 Query: 83 agttcattaaactaatgggctaatgaaaacgcgtacatataatattttctccagcaccaa 142 |||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||| Sbjct: 653 agttcatttaactaatgggctaatggaaacgcatacatataatattt-ctccagcaccag 595 Query: 143 aggcaacagctagatgaacctgcaacgcctttgcgtgtgcaaagctaacattaaccgcat 202 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 594 aggcaacagctagatgaacctgcaacgcctttgcaagtgcaaatctaacattaaccgcat 535 Query: 203 t 203 | Sbjct: 534 t 534
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 474 bits (239), Expect = e-130 Identities = 383/431 (88%) Strand = Plus / Plus Query: 254 tactctcgctcaatctgaatggtcacatgactgatgttgtactctgccttgatgtaccca 313 ||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||| Sbjct: 67680 tactcgcgctcaatctgaatggtcacatggctgatgttgtactcagacttgatgtaccca 67739 Query: 314 atgaccttgtcaagcattttatcagcatccacatcctgcgtgatcgtcacatggcatgcc 373 || |||||||| ||||||| |||||| || | ||||| ||||| ||||||||||| ||| Sbjct: 67740 atcaccttgtccagcatttgatcagcgtctgcgtcctgagtgattgtcacatggcacgcc 67799 Query: 374 aagagcaccttccccactgtgatagcccagatgtgcagctcatggacagcaatcacacct 433 | ||| ||||||||||| || || |||||||||||||||||||| || |||| |||||| Sbjct: 67800 aggagaaccttccccaccgttatggcccagatgtgcagctcatgtactgcaaccacaccg 67859 Query: 434 tccatctcacggagaccagtctcaagcctggtggcatcgatctcgcggggcgtgctctcc 493 ||||| || ||||| ||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 67860 tccatgtcgcggaggccattctcaaggctggtggcatcgatctcgcggggcgtgctctcc 67919 Query: 494 ataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagtacaatcacagag 553 || ||||| ||||| ||||| || | |||||||||||||||||| ||||| ||||| ||| Sbjct: 67920 atcaggacctcaaggatgttgcgcagcatcttgattgtggtgaagagtacgatcacggag 67979 Query: 554 aagatgagggtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcc 613 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 67980 aagatgagggtgcagatgagatcaataatcttccactcgggcttgtaccagatgatagcc 68039 Query: 614 cctccaatcattacaccaatgctctggatggagtccccaattacatgcagatatgcactg 673 ||||||||||| ||||| ||||||||||| || ||||||| ||||||||||| |||||| Sbjct: 68040 cctccaatcatcacaccgatgctctggattgaatccccaagcacatgcagataagcactg 68099 Query: 674 tggacattgat 684 || |||||||| Sbjct: 68100 tgtacattgat 68110
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 474 bits (239), Expect = e-130 Identities = 383/431 (88%) Strand = Plus / Plus Query: 254 tactctcgctcaatctgaatggtcacatgactgatgttgtactctgccttgatgtaccca 313 ||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||| Sbjct: 1615520 tactcgcgctcaatctgaatggtcacatggctgatgttgtactcagacttgatgtaccca 1615579 Query: 314 atgaccttgtcaagcattttatcagcatccacatcctgcgtgatcgtcacatggcatgcc 373 || |||||||| ||||||| |||||| || | ||||| ||||| ||||||||||| ||| Sbjct: 1615580 atcaccttgtccagcatttgatcagcgtctgcgtcctgagtgattgtcacatggcacgcc 1615639 Query: 374 aagagcaccttccccactgtgatagcccagatgtgcagctcatggacagcaatcacacct 433 | ||| ||||||||||| || || |||||||||||||||||||| || |||| |||||| Sbjct: 1615640 aggagaaccttccccaccgttatggcccagatgtgcagctcatgtactgcaaccacaccg 1615699 Query: 434 tccatctcacggagaccagtctcaagcctggtggcatcgatctcgcggggcgtgctctcc 493 ||||| || ||||| ||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1615700 tccatgtcgcggaggccattctcaaggctggtggcatcgatctcgcggggcgtgctctcc 1615759 Query: 494 ataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagtacaatcacagag 553 || ||||| ||||| ||||| || | |||||||||||||||||| ||||| ||||| ||| Sbjct: 1615760 atcaggacctcaaggatgttgcgcagcatcttgattgtggtgaagagtacgatcacggag 1615819 Query: 554 aagatgagggtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcc 613 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 1615820 aagatgagggtgcagatgagatcaataatcttccactcgggcttgtaccagatgatagcc 1615879 Query: 614 cctccaatcattacaccaatgctctggatggagtccccaattacatgcagatatgcactg 673 ||||||||||| ||||| ||||||||||| || ||||||| ||||||||||| |||||| Sbjct: 1615880 cctccaatcatcacaccgatgctctggattgaatccccaagcacatgcagataagcactg 1615939 Query: 674 tggacattgat 684 || |||||||| Sbjct: 1615940 tgtacattgat 1615950
>dbj|AK100735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117P18, full insert sequence Length = 1813 Score = 466 bits (235), Expect = e-128 Identities = 382/431 (88%) Strand = Plus / Minus Query: 254 tactctcgctcaatctgaatggtcacatgactgatgttgtactctgccttgatgtaccca 313 ||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||| Sbjct: 1389 tactcgcgctcaatctgaatggtcacatggctgatgttgtactcagacttgatgtaccca 1330 Query: 314 atgaccttgtcaagcattttatcagcatccacatcctgcgtgatcgtcacatggcatgcc 373 || |||||||| ||||||| |||||| || | ||||| ||||| ||||||||||| ||| Sbjct: 1329 atcaccttgtccagcatttgatcagcgtctgcgtcctgagtgattgtcacatggcacgcc 1270 Query: 374 aagagcaccttccccactgtgatagcccagatgtgcagctcatggacagcaatcacacct 433 | ||| ||||||||||| || || |||||||||||||||||||| || |||| |||||| Sbjct: 1269 aggagaaccttccccaccgttatggcccagatgtgcagctcatgtactgcaaccacaccg 1210 Query: 434 tccatctcacggagaccagtctcaagcctggtggcatcgatctcgcggggcgtgctctcc 493 ||||| || ||||| ||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1209 tccatgtcgcggaggccattctcaaggctggtggcatcgatctcgcggggcgtgctctcc 1150 Query: 494 ataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagtacaatcacagag 553 || ||||| ||||| ||||| || | |||||||||||||||||| ||||| ||||| || Sbjct: 1149 atcaggacctcaaggatgttgcgcagcatcttgattgtggtgaagagtacgatcacggaa 1090 Query: 554 aagatgagggtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcc 613 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 1089 aagatgagggtgcagatgagatcaataatcttccactcgggcttgtaccagatgatagcc 1030 Query: 614 cctccaatcattacaccaatgctctggatggagtccccaattacatgcagatatgcactg 673 ||||||||||| ||||| ||||||||||| || ||||||| ||||||||||| |||||| Sbjct: 1029 cctccaatcatcacaccgatgctctggattgaatccccaagcacatgcagataagcactg 970 Query: 674 tggacattgat 684 || |||||||| Sbjct: 969 tgtacattgat 959
>gb|AY266290.1| Oryza sativa (japonica cultivar-group) zinc transporter (OZT) mRNA, complete cds Length = 1685 Score = 464 bits (234), Expect = e-127 Identities = 375/422 (88%) Strand = Plus / Minus Query: 254 tactctcgctcaatctgaatggtcacatgactgatgttgtactctgccttgatgtaccca 313 ||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||| Sbjct: 1258 tactcgcgctcaatctgaatggtcacatggctgatgttgtactcagacttgatgtaccca 1199 Query: 314 atgaccttgtcaagcattttatcagcatccacatcctgcgtgatcgtcacatggcatgcc 373 || |||||||| ||||||| |||||| || | ||||| ||||| ||||||||||| ||| Sbjct: 1198 atcaccttgtccagcatttgatcagcgtctgcgtcctgagtgattgtcacatggcacgcc 1139 Query: 374 aagagcaccttccccactgtgatagcccagatgtgcagctcatggacagcaatcacacct 433 | ||| ||||||||||| || || |||||||||||||||||||| || |||| |||||| Sbjct: 1138 aggagaaccttccccaccgttatggcccagatgtgcagctcatgtactgcaaccacaccg 1079 Query: 434 tccatctcacggagaccagtctcaagcctggtggcatcgatctcgcggggcgtgctctcc 493 ||||| || ||||| ||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1078 tccatgtcgcggaggccattctcaaggctggtggcatcgatctcgcggggcgtgctctcc 1019 Query: 494 ataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagtacaatcacagag 553 || ||||| ||||| ||||| || | |||||||||||||||||| ||||| ||||| ||| Sbjct: 1018 atcaggacctcaaggatgttgcgcagcatcttgattgtggtgaagagtacgatcacggag 959 Query: 554 aagatgagggtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcc 613 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 958 aagatgagggtgcagatgagatcaataatcttccactcgggcttgtaccagatgatagcc 899 Query: 614 cctccaatcattacaccaatgctctggatggagtccccaattacatgcagatatgcactg 673 ||||||||||| ||||| ||||||||||| || ||||||| ||||||||||| |||||| Sbjct: 898 cctccaatcatcacaccgatgctctggattgaatccccaagcacatgcagataagcactg 839 Query: 674 tg 675 || Sbjct: 838 tg 837
>gb|BT018305.1| Zea mays clone EL01T0206F07.c mRNA sequence Length = 1414 Score = 246 bits (124), Expect = 8e-62 Identities = 253/296 (85%) Strand = Plus / Minus Query: 358 cgtcacatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatg 417 |||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| || Sbjct: 923 cgtcacatggcaagccagtagcaccttccccactgtgatggcccagatatgcagctcgtg 864 Query: 418 gacagcaatcacaccttccatctcacggagaccagtctcaagcctggtggcatcgatctc 477 ||| |||| ||| ||||||||||| | ||| || |||| ||||||||||| |||||||| Sbjct: 863 gacggcaaccacgccttccatctcgcagagccccctctccagcctggtggcgtcgatctc 804 Query: 478 gcggggcgtgctctccataaggacttcaagtatgttccgaatcatcttgattgtggtgaa 537 ||||||||||| ||||| ||||| || || ||||| || | |||| |||| |||||||| Sbjct: 803 acggggcgtgctttccatcaggacctcgaggatgttgcgcagcatcctgatcgtggtgaa 744 Query: 538 cagtacaatcacagagaagatgagggtgcatatgagatcaataatcttccattcgggctt 597 ||| || | ||| ||||||||||||||||| || ||||| || || ||||| |||||||| Sbjct: 743 cagcacgaccaccgagaagatgagggtgcagatcagatcgatgattttccactcgggctt 684 Query: 598 gtaccagatgagagcccctccaatcattacaccaatgctctggatggagtccccaa 653 ||||||||||| |||||| || ||||| || || |||||||||||||||||||||| Sbjct: 683 gtaccagatgatagccccgccgatcatcaccccgatgctctggatggagtccccaa 628 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 268 ctgaatggtcacatgactgatgttgtactctgccttgatgtacccaatgaccttgtcaag 327 ||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 1013 ctgaatggtcacatggctgatgttgtactccgtcttgatgtacccaatcaccttgtcaag 954
>gb|AY105866.1| Zea mays PCO121254 mRNA sequence Length = 1551 Score = 204 bits (103), Expect = 3e-49 Identities = 352/435 (80%) Strand = Plus / Minus Query: 254 tactctcgctcaatctgaatggtcacatgactgatgttgtactctgccttgatgtaccca 313 ||||| ||||| | ||| ||||||||||| |||||||||||||| | |||||||||||| Sbjct: 1347 tactcgcgctcgacctggatggtcacatggctgatgttgtactccgtcttgatgtacccg 1288 Query: 314 atgaccttgtcaagcattttatcagcatccacatcctgcgtgatcgtcacatggcatgcc 373 || ||||||||||| || | |||||| ||| ||||| | ||| ||||||||||| ||| Sbjct: 1287 atcaccttgtcaaggatctcatcagcgtccgcatccctggcgatggtcacatggcacgcc 1228 Query: 374 aagagcaccttccccactgtgatagcccagatgtgcagctcatggacagcaatcacacct 433 | |||||||| ||||| ||||| ||||||||||||||||| ||||| || | ||| || Sbjct: 1227 agcagcaccttgcccaccgtgatggcccagatgtgcagctcgtggacggccaccacgccc 1168 Query: 434 tccatctcacggagaccagtctcaagcctggtggcatcgatctcgcggggcgtgctctcc 493 |||||| | | ||| || |||| ||||||||||| |||||||||||||||||||||||| Sbjct: 1167 tccatcccgcagagcccgctctccagcctggtggcgtcgatctcgcggggcgtgctctcc 1108 Query: 494 ataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagtacaatcacagag 553 || | ||||| || ||| | || | |||| ||| ||||||||||| || | ||| ||| Sbjct: 1107 atcaacacttcgaggatgctgcgcagcatccggatcgtggtgaacagcaccaccaccgag 1048 Query: 554 aagatgagggtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcc 613 |||| ||| ||||| ||||| || || | |||||| || |||||||||||||||| ||| Sbjct: 1047 aagacgagcgtgcagatgaggtcgatgaccttccactccggcttgtaccagatgatcgcc 988 Query: 614 cctccaatcattacaccaatgctctggatggagtccccaattacatgcagatatgcactg 673 || || | ||| || || | |||||||| ||||||||| | || || || ||||| ||| Sbjct: 987 ccgcccaccatgaccccgacgctctggacggagtccccgagcacgtggaggtatgcgctg 928 Query: 674 tggacattgatgttc 688 || || ||||||||| Sbjct: 927 tgcacgttgatgttc 913
>gb|AY108016.1| Zea mays PCO077206 mRNA sequence Length = 746 Score = 200 bits (101), Expect = 4e-48 Identities = 212/249 (85%) Strand = Plus / Minus Query: 358 cgtcacatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatg 417 |||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| || Sbjct: 249 cgtcacatggcaagccagtagcaccttccccactgtgatggcccagatatgcagctcgtg 190 Query: 418 gacagcaatcacaccttccatctcacggagaccagtctcaagcctggtggcatcgatctc 477 ||| |||| ||| ||||||||||| | ||| || |||| ||||||||||| |||||||| Sbjct: 189 gacggcaaccacgccttccatctcgcagagccccctctccagcctggtggcgtcgatctc 130 Query: 478 gcggggcgtgctctccataaggacttcaagtatgttccgaatcatcttgattgtggtgaa 537 ||||||||||| ||||| ||||| || || ||||| || | |||| |||| |||||||| Sbjct: 129 acggggcgtgctttccatcaggacctcgaggatgttgcgcagcatcctgatcgtggtgaa 70 Query: 538 cagtacaatcacagagaagatgagggtgcatatgagatcaataatcttccattcgggctt 597 ||| || | ||| ||||||||||||||||| || ||||| || || ||||| |||||||| Sbjct: 69 cagcacgaccaccgagaagatgagggtgcagatcagatcgatgattttccactcgggctt 10 Query: 598 gtaccagat 606 ||||||||| Sbjct: 9 gtaccagat 1 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 268 ctgaatggtcacatgactgatgttgtactctgccttgatgtacccaatgaccttgtcaag 327 ||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 339 ctgaatggtcacatggctgatgttgtactccgtcttgatgtacccaatcaccttgtcaag 280
>emb|AJ704807.1| Arabidopsis lyrata subsp. petraea partial mRNA for putative zinc transport protein MTP1-1 Length = 1155 Score = 131 bits (66), Expect = 3e-27 Identities = 261/326 (80%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 1070 acatggcaagccaatagcacttttcccactgtgatagcccaaatgtgaagctcatgaaca 1011 Query: 422 gcaatcacaccttccatctcacggagaccagtctcaagcctggtggcatcgatctcgcgg 481 || | ||| ||||||| ||| | ||||| | || ||| | ||||| || ||||| | | Sbjct: 1010 gccaccacttcttccatttcaagcagacccttttcgagctttgtggcgtcaatctctctg 951 Query: 482 ggcgtgctctccataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagt 541 || ||||||||||| | ||||| || ||||| |||||||| ||||| || || || Sbjct: 950 ggtgtgctctccatcaatacttctagaatgtttcgaatcatgttgatggttgttcctagg 891 Query: 542 acaatcacagagaagatgagggtgcatatgagatcaataatcttccattcgggcttgtac 601 ||||| || || |||| || ||||| || ||||| | ||||||||||| || |||||| Sbjct: 890 acaataaccgaaaagacaagtgtgcagatcagatccactatcttccattccgggttgtac 831 Query: 602 cagatgagagcccctccaatcattacaccaatgctctggatggagtccccaattacatgc 661 || |||| ||| ||||||||||| ||||||| ||||||||||| ||||||| |||||| Sbjct: 830 caaatgatagctcctccaatcataacaccaacactctggatggaatccccaaggacatgc 771 Query: 662 agatatgcactgtggacattgatgtt 687 ||||| || | |||||||||||||| Sbjct: 770 agataagctccttggacattgatgtt 745
>gb|AY483147.1| Arabidopsis lyrata heavy metal transporter MTP1 mRNA, complete cds Length = 1206 Score = 123 bits (62), Expect = 8e-25 Identities = 260/326 (79%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 1100 acatggcaagccaatagcacttttcccactgtgatagcccaaatgtgaagctcatgaaca 1041 Query: 422 gcaatcacaccttccatctcacggagaccagtctcaagcctggtggcatcgatctcgcgg 481 || | ||| ||||||| ||| | ||||| | || ||| | ||||| || ||||| | | Sbjct: 1040 gccaccacttcttccatttcaagcagacccttttcgagctttgtggcgtcaatctctctg 981 Query: 482 ggcgtgctctccataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagt 541 || || |||||||| | ||||| || ||||| |||||||| ||||| || || || Sbjct: 980 ggtgtactctccatcaatacttctagaatgtttcgaatcatgttgatggttgttcctagg 921 Query: 542 acaatcacagagaagatgagggtgcatatgagatcaataatcttccattcgggcttgtac 601 ||||| || || |||| || ||||| || ||||| | ||||||||||| || |||||| Sbjct: 920 acaataaccgaaaagacaagtgtgcagatcagatccactatcttccattccgggttgtac 861 Query: 602 cagatgagagcccctccaatcattacaccaatgctctggatggagtccccaattacatgc 661 || |||| ||| ||||||||||| ||||||| ||||||||||| ||||||| |||||| Sbjct: 860 caaatgatagctcctccaatcataacaccaacactctggatggaatccccaaggacatgc 801 Query: 662 agatatgcactgtggacattgatgtt 687 ||||| || | |||||||||||||| Sbjct: 800 agataagctccttggacattgatgtt 775
>gb|AY483148.1| Arabidopsis lyrata heavy metal transporter MTP2 mRNA, complete cds Length = 1095 Score = 115 bits (58), Expect = 2e-22 Identities = 259/326 (79%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 989 acatggcaagccaatagcacttttcccactgtgatagcccaaatgtgaagctcatgaaca 930 Query: 422 gcaatcacaccttccatctcacggagaccagtctcaagcctggtggcatcgatctcgcgg 481 || | ||| ||||||| ||| | ||||| | | ||| | ||||| || ||||| | | Sbjct: 929 gccaccacttcttccatttcaagcagaccctttttgagctttgtggcgtcaatctctctg 870 Query: 482 ggcgtgctctccataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagt 541 || || |||||||| | ||||| || ||||| |||||||| ||||| || || || Sbjct: 869 ggtgtactctccatcaatacttctagaatgtttcgaatcatgttgatggttgttcctagg 810 Query: 542 acaatcacagagaagatgagggtgcatatgagatcaataatcttccattcgggcttgtac 601 ||||| || || |||| || ||||| || ||||| | ||||||||||| || |||||| Sbjct: 809 acaataaccgaaaagacaagtgtgcagatcagatccactatcttccattccgggttgtac 750 Query: 602 cagatgagagcccctccaatcattacaccaatgctctggatggagtccccaattacatgc 661 || |||| ||| ||||||||||| ||||||| ||||||||||| ||||||| |||||| Sbjct: 749 caaatgatagctcctccaatcataacaccaacactctggatggaatccccaaggacatgc 690 Query: 662 agatatgcactgtggacattgatgtt 687 ||||| || | |||||||||||||| Sbjct: 689 agataagctccttggacattgatgtt 664
>gb|AY450453.1| Populus balsamifera subsp. trichocarpa x Populus deltoides metal tolerance protein 1 (MTP1) mRNA, complete cds Length = 1182 Score = 115 bits (58), Expect = 2e-22 Identities = 151/182 (82%) Strand = Plus / Minus Query: 485 gtgctctccataaggacttcaagtatgttccgaatcatcttgattgtggtgaacagtaca 544 ||||||||||| |||||||||||||||||||| | ||| |||||||| || || || Sbjct: 953 gtgctctccatcaggacttcaagtatgttccgtagcattttgattgttgtacccaaaact 894 Query: 545 atcacagagaagatgagggtgcatatgagatcaataatcttccattcgggcttgtaccag 604 || ||||| ||||| |||||||| || |||||||| |||||||| || ||||| ||||| Sbjct: 893 ataacagaaaagattagggtgcagatcagatcaattatcttccactcaggcttataccat 834 Query: 605 atgagagcccctccaatcattacaccaatgctctggatggagtccccaattacatgcaga 664 || | || ||||| |||||||| ||||| ||||||||||| ||||||| |||||| ||| Sbjct: 833 ataattgcacctccgatcattaccccaatactctggatggaatccccaagtacatggaga 774 Query: 665 ta 666 || Sbjct: 773 ta 772
>emb|AJ704802.1| Arabidopsis halleri subsp. halleri partial mRNA for putative zinc transport protein MTP1-2 Length = 950 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 ||||||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||| Sbjct: 529 atcttccattccgggttgtaccaaatgatagctcctccaatcataacaccaaaactctgg 470 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||| ||||||| ||||||||||| || | |||||||||||||| Sbjct: 469 atggaatccccaaggacatgcagataagctccttggacattgatgtt 423 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 748 acatggcaagccaatagcacttttcccactgtgatagcccaaatgtgaagctcatgaaca 689 Query: 422 gc 423 || Sbjct: 688 gc 687
>emb|AJ704801.1| Arabidopsis halleri subsp. halleri partial mRNA for putative zinc transport protein MTP1-1 Length = 952 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 ||||||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||| Sbjct: 523 atcttccattccgggttgtaccaaatgatagctcctccaatcataacaccaacactctgg 464 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||| ||||||| ||||||||||| || | |||||||||||||| Sbjct: 463 atggaatccccaaggacatgcagataagctccttggacattgatgtt 417 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 742 acatggcaagccaatagcacttttcccactgtgatagcccaaatgtgaagctcatgaaca 683 Query: 422 gc 423 || Sbjct: 682 gc 681
>emb|AJ556183.1|AHA556183 Arabidopsis halleri subsp. halleri cdf1-3 gene for zinc transporter CDF1-3 Length = 1363 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 ||||||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||| Sbjct: 940 atcttccattccgggttgtaccaaatgatagctcctccaatcataacaccaacactctgg 881 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||| ||||||| ||||||||||| || | |||||||||||||| Sbjct: 880 atggaatccccaaggacatgcagataagctccttggacattgatgtt 834 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 1159 acatggcaagccaatagcacttttcccactgtgatagcccaaatgtgaagctcatgaaca 1100 Query: 422 gc 423 || Sbjct: 1099 gc 1098
>gb|AY483149.1| Brassica juncea heavy metal transporter MTP1 mRNA, complete cds Length = 1149 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || ||||||| |||||||| || || ||||||||||||| ||| || || ||| Sbjct: 842 gtgcagatcagatcaactatcttccactccggtttgtaccagatgacagctccaccgatc 783 Query: 623 attacaccaatgctctggatggagtccccaattacatgcagatatgcactgtggacattg 682 || ||||||| |||||||||||||||||||| ||||| ||||| || | ||||||||| Sbjct: 782 ataacaccaacgctctggatggagtccccaaggacatgaagataagctccctggacattg 723 Query: 683 atgttc 688 |||||| Sbjct: 722 atgttc 717 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 377 agcaccttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| |||||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 1028 agcactttccccaccgtgatagcccaaatgtgaagctcatgaacagc 982
>gb|AY188449.1| Brassica juncea cation-efflux transporter (CET2) mRNA, complete cds Length = 1336 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || ||||||| |||||||| || || ||||||||||||| ||| || || ||| Sbjct: 920 gtgcagatcagatcaactatcttccactccggtttgtaccagatgacagctccaccgatc 861 Query: 623 attacaccaatgctctggatggagtccccaattacatgcagatatgcactgtggacattg 682 || ||||||| |||||||||||||||||||| ||||| ||||| || | ||||||||| Sbjct: 860 ataacaccaacgctctggatggagtccccaaggacatgaagataagctccctggacattg 801 Query: 683 atgttc 688 |||||| Sbjct: 800 atgttc 795 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 377 agcaccttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| |||||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 1106 agcactttccccaccgtgatagcccaaatgtgaagctcatgaacagc 1060
>gb|AY188450.1| Brassica juncea cation-efflux transporter (CET3) mRNA, complete cds Length = 1363 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 584 ttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctggatg 643 |||||||| || ||| ||||||||| |||||||| ||||| ||||||| |||||||||| Sbjct: 924 ttccattccgggttgcaccagatgacggcccctccgatcataacaccaacgctctggatg 865 Query: 644 gagtccccaattacatgcagatatgcactgtggacattgatgttc 688 |||||||||| ||||| ||||| || | ||||||||||||||| Sbjct: 864 gagtccccaaggacatgaagataagctccttggacattgatgttc 820 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 377 agcaccttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1131 agcacttttcccactgtgatagcccaaatgtgaagctcatgaacagc 1085
>ref|NM_130246.2| Arabidopsis thaliana ZAT1; zinc ion transporter AT2G46800 (ZAT1) transcript variant AT2G46800.1 mRNA, complete cds Length = 1371 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 ||||||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||| Sbjct: 965 atcttccattccggattgtaccaaatgatagctcctccaatcataacaccaacactctgg 906 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||| ||||||| ||||||||||| || | |||| ||||||||| Sbjct: 905 atggaatccccaaggacatgcagataagctccttggagattgatgtt 859 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 1184 acatggcaagccaatagcacttttcccactgtgatagcccatatgtggagctcatgaaca 1125 Query: 422 gc 423 || Sbjct: 1124 gc 1123
>ref|NM_180128.2| Arabidopsis thaliana ZAT1; zinc ion transporter AT2G46800 (ZAT1) transcript variant AT2G46800.2 mRNA, complete cds Length = 1491 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 ||||||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||| Sbjct: 1085 atcttccattccggattgtaccaaatgatagctcctccaatcataacaccaacactctgg 1026 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||| ||||||| ||||||||||| || | |||| ||||||||| Sbjct: 1025 atggaatccccaaggacatgcagataagctccttggagattgatgtt 979 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 1304 acatggcaagccaatagcacttttcccactgtgatagcccatatgtggagctcatgaaca 1245 Query: 422 gc 423 || Sbjct: 1244 gc 1243
>gb|AC005310.3| Arabidopsis thaliana chromosome 2 clone F19D11 map CIC06C03, complete sequence Length = 68415 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 ||||||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||| Sbjct: 38207 atcttccattccggattgtaccaaatgatagctcctccaatcataacaccaacactctgg 38148 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||| ||||||| ||||||||||| || | |||| ||||||||| Sbjct: 38147 atggaatccccaaggacatgcagataagctccttggagattgatgtt 38101 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 38426 acatggcaagccaatagcacttttcccactgtgatagcccatatgtggagctcatgaaca 38367 Query: 422 gc 423 || Sbjct: 38366 gc 38365
>gb|AY086033.1| Arabidopsis thaliana clone 207558 mRNA, complete sequence Length = 1372 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 ||||||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||| Sbjct: 967 atcttccattccggattgtaccaaatgatagctcctccaatcataacaccaacactctgg 908 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||| ||||||| ||||||||||| || | |||| ||||||||| Sbjct: 907 atggaatccccaaggacatgcagataagctccttggagattgatgtt 861 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 1186 acatggcaagccaatagcacttttcccactgtgatagcccatatgtggagctcatgaaca 1127 Query: 422 gc 423 || Sbjct: 1126 gc 1125
>gb|AF072858.1|AF072858 Arabidopsis thaliana zinc transporter ZAT mRNA, complete cds Length = 1490 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 ||||||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||| Sbjct: 1085 atcttccattccggattgtaccaaatgatagctcctccaatcataacaccaacactctgg 1026 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgtt 687 ||||| ||||||| ||||||||||| || | |||| ||||||||| Sbjct: 1025 atggaatccccaaggacatgcagataagctccttggagattgatgtt 979 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 1304 acatggcaagccaatagcacttttcccactgtgatagcccatatgtggagctcatgaaca 1245 Query: 422 gc 423 || Sbjct: 1244 gc 1243
>dbj|AP006637.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208b, complete sequence Length = 33484 Score = 77.8 bits (39), Expect = 4e-11 Identities = 162/203 (79%) Strand = Plus / Minus Query: 464 gtggcatcgatctcgcggggcgtgctctccataaggacttcaagtatgttccgaatcatc 523 |||||||| ||||| ||||||||||| ||||| |||||||| || ||||| |||| ||| Sbjct: 16191 gtggcatctatctcacggggcgtgctttccatcaggacttccagaatgtttcgaagcatg 16132 Query: 524 ttgattgtggtgaacagtacaatcacagagaagatgagggtgcatatgagatcaataatc 583 ||||| || || || ||||| || || || || || ||||| || ||||||| || Sbjct: 16131 ttgatagtagtccccaaaacaattactgaaaaaatcagagtgcagattagatcaactatt 16072 Query: 584 ttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctggatg 643 | ||| || ||||| ||||| |||| || |||||||||||||| ||||| |||||||| Sbjct: 16071 tgccactcaggcttataccatatgactgctcctccaatcattaccccaatactctggata 16012 Query: 644 gagtccccaattacatgcagata 666 ||||| |||| |||||| ||||| Sbjct: 16011 gagtctccaagtacatggagata 15989 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 |||||||||||||| || ||||| |||||||||||||| ||||| Sbjct: 16275 accttccccactgtaatggcccatatgtgcagctcatgaacagc 16232
>gb|AY483145.1| Thlaspi arvense heavy metal transporter MTP1 mRNA, complete cds Length = 1191 Score = 73.8 bits (37), Expect = 7e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 584 ttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctggatg 643 |||||||| || |||||||| |||| ||| ||||||||||| ||||||| |||||||||| Sbjct: 863 ttccattccggtttgtaccaaatgacagctcctccaatcataacaccaacgctctggatg 804 Query: 644 gagtccccaattacatgcagatatgcactgtggacattgatgttc 688 || || |||| || || ||||| || | ||||||||||||||| Sbjct: 803 gaatcgccaaggacgtgaagataagctccttggacattgatgttc 759
>gb|AY187082.1| Brassica juncea cation-efflux transporter (CET1) mRNA, complete cds Length = 1481 Score = 71.9 bits (36), Expect = 3e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 581 atcttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctgg 640 |||||||| || || ||||||||||||| | | ||||||||||| ||||||| ||||||| Sbjct: 1039 atcttccactccgggttgtaccagatgatacctcctccaatcataacaccaacgctctgg 980 Query: 641 atggagtccccaattacatgcagatatgcactgtggacattgatgttc 688 || ||||| |||| ||||| || || || | ||||||||||||||| Sbjct: 979 attgagtctccaaggacatggaggtaagctccttggacattgatgttc 932 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 383 ttccccactgtgatagcccagatgtgcagctcatggacagcaatcacaccttccatctc 441 |||||||| ||||||||||| ||||| |||||||| ||||| | ||| |||||||||| Sbjct: 1237 ttccccaccgtgatagcccaaatgtgaagctcatgaacagccaccacttcttccatctc 1179
>gb|AY483144.1| Noccaea fendleri heavy metal transporter MTP1 mRNA, complete cds Length = 1179 Score = 67.9 bits (34), Expect = 4e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 872 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 813 Query: 623 attacaccaatgctctggatggagtccccaattacatgcagatatgcactgtggacattg 682 || ||||||| ||||||||| || || |||| ||||| ||||| || | || |||||| Sbjct: 812 ataacaccaacgctctggattgaatcaccaagaacatgaagataagctccttgcacattg 753 Query: 683 atgttc 688 |||||| Sbjct: 752 atgttc 747 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1055 acctttcccactgtgatagcccaaatgtgaagctcatgaacagc 1012
>gb|AY560018.1| Thlaspi goesingense metal tolerance protein 1 variant b (MTP1) gene, MTP1-b allele, complete cds Length = 1173 Score = 67.9 bits (34), Expect = 4e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 866 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 807 Query: 623 attacaccaatgctctggatggagtccccaattacatgcagatatgcactgtggacattg 682 || ||||||| ||||||||| || || |||| ||||| ||||| || | || |||||| Sbjct: 806 ataacaccaacgctctggattgaatcaccaagaacatgaagataagctccttgcacattg 747 Query: 683 atgttc 688 |||||| Sbjct: 746 atgttc 741 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1049 acctttcccactgtgatagcccaaatgtgaagctcatgaacagc 1006
>gb|AY560017.1| Thlaspi goesingense metal tolerance protein 1 variant a (MTP1) gene, MTP1-a allele, complete cds Length = 1173 Score = 67.9 bits (34), Expect = 4e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 866 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 807 Query: 623 attacaccaatgctctggatggagtccccaattacatgcagatatgcactgtggacattg 682 || ||||||| ||||||||| || || |||| ||||| ||||| || | || |||||| Sbjct: 806 ataacaccaacgctctggattgaatcaccaagaacatgaagataagctccttgcacattg 747 Query: 683 atgttc 688 |||||| Sbjct: 746 atgttc 741 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 1049 acctttcccaccgtgatagcccaaatgtgaagctcatgaacagc 1006
>gb|AC130275.16| Medicago truncatula clone mth1-63a17, complete sequence Length = 90599 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 584 ttccattcgggcttgtaccagatgagagcccctccaatcattacaccaatgctctggatg 643 |||||||| || || ||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 31908 ttccattcaggtttataccatatgattgctcccccaatcattacaccaatactctggata 31967 Query: 644 gagtccccaattacatgcagatatgc 669 ||||| |||| |||||| |||||||| Sbjct: 31968 gagtctccaagtacatggagatatgc 31993 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 |||||||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 31704 accttccctactgtaatggcccatatgtgcagctcatgaacagc 31747
>emb|BX819907.1|CNS0A8FS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS46ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 363 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct: 176 acatggcaagccaatagcacttttcccactgtgatagcccatatgtggagctcatgaaca 117 Query: 422 gc 423 || Sbjct: 116 gc 115
>gb|AY188451.1| Brassica juncea cation-efflux transporter (CET4) mRNA, complete cds Length = 1379 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 542 acaatcacagagaagatgagggtgcatatgagatcaataatcttccattcgggcttgtac 601 ||||| || ||||||| || ||||| || ||||||| |||||||| || ||||||||| Sbjct: 975 acaataaccgagaagacaagcgtgcagatcagatcaactatcttccactctggcttgtac 916 Query: 602 cagatgagagcccctccaatcattacaccaatgctctggat 642 ||||||| || ||||||| ||| ||||||| ||||||||| Sbjct: 915 cagatgatggctcctccaaccataacaccaacgctctggat 875 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 377 agcaccttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| |||||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 1140 agcactttccccaccgtgatagcccaaatgtgaagctcatgaacagc 1094
>gb|AY483146.1| Thlaspi caerulescens heavy metal transporter MTP1 mRNA, complete cds Length = 1191 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 884 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 825 Query: 623 attacaccaatgctctggat 642 || ||||||| ||||||||| Sbjct: 824 ataacaccaacgctctggat 805 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagcaatcacaccttccat 438 ||||| ||||||||||||||||| ||||| |||||||| ||||| | ||| |||||||| Sbjct: 1067 acctttcccactgtgatagcccaaatgtgaagctcatgaacagccaccactccttccat 1009
>gb|AF275750.1|AF275750 Thlaspi caerulescens zinc transporter (ZTP1) mRNA, complete cds Length = 1353 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 934 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 875 Query: 623 attacaccaatgctctggat 642 || ||||||| ||||||||| Sbjct: 874 ataacaccaacgctctggat 855 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1117 acctttcccactgtgatagcccaaatgtgaagctcatgaacagc 1074
>gb|AY044454.2| Thlaspi goesingense putative vacuolar metal-ion transport protein MTP1t2 (MTP1) mRNA, complete cds; alternatively spliced Length = 1083 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 776 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 717 Query: 623 attacaccaatgctctggat 642 || ||||||| ||||||||| Sbjct: 716 ataacaccaacgctctggat 697
>gb|AY044453.2| Thlaspi goesingense putative vacuolar metal-ion transport protein MTP1t1 (MTP1) mRNA, complete cds Length = 1179 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 872 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 813 Query: 623 attacaccaatgctctggat 642 || ||||||| ||||||||| Sbjct: 812 ataacaccaacgctctggat 793 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1055 acctttcccactgtgatagcccaaatgtgaagctcatgaacagc 1012
>gb|AY044452.2| Thlaspi goesingense putative vacuolar metal-ion transport protein MTP1 (MTP1) gene, complete cds Length = 1179 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 872 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 813 Query: 623 attacaccaatgctctggat 642 || ||||||| ||||||||| Sbjct: 812 ataacaccaacgctctggat 793 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1055 acctttcccactgtgatagcccaaatgtgaagctcatgaacagc 1012
>gb|AY311490.1| Thlaspi caerulescens cation-efflux transporter (CET1) mRNA, complete cds Length = 1191 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 884 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 825 Query: 623 attacaccaatgctctggat 642 || ||||||| ||||||||| Sbjct: 824 ataacaccaacgctctggat 805 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1067 acctttcccactgtgatagcccaaatgtgaagctcatgaacagc 1024
>gb|AY560019.1| Thlaspi goesingense metal tolerance protein 1 variant c (MTP1) gene, MTP1-c allele, complete cds Length = 1191 Score = 60.0 bits (30), Expect = 1e-05 Identities = 102/126 (80%) Strand = Plus / Minus Query: 563 gtgcatatgagatcaataatcttccattcgggcttgtaccagatgagagcccctccaatc 622 ||||| || |||||||| |||||||||| || |||||||| ||| ||| ||||||||| Sbjct: 884 gtgcagatcagatcaattatcttccatttcgggttgtaccaaatggcagctcctccaatc 825 Query: 623 attacaccaatgctctggatggagtccccaattacatgcagatatgcactgtggacattg 682 || ||||||| |||||||| || || |||| ||||| ||||| || | || |||||| Sbjct: 824 ataacaccaacactctggattgaatcaccaagaacatgaagataagctccttgcacattg 765 Query: 683 atgttc 688 |||||| Sbjct: 764 atgttc 759 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 380 accttccccactgtgatagcccagatgtgcagctcatggacagc 423 ||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1067 acctttcccactgtgatagcccaaatgtgaagctcatgaacagc 1024
>gb|AF197329.1|AF197329 Eucalyptus grandis zinc transporter (EgZnT1) mRNA, complete cds Length = 1635 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatggaca 421 |||||||| || || |||||||| || || || ||||||||||||||||| ||||| || Sbjct: 1261 acatggcaggctaatagcacctttccaaccgttatagcccagatgtgcagttcatgaact 1202 Query: 422 gcaatcacaccttccatctcacggagaccagtctcaagcctggtggcatcgatctcgcgg 481 |||||||| | ||||||| | || ||| |||| ||||| |||||||| ||||| | Sbjct: 1201 gcaatcacttcatccatcttgcaaagtccactctcgagcctagtggcatcaatctctcta 1142 Query: 482 ggcgtgctctccat 495 ||||| |||||||| Sbjct: 1141 ggcgtactctccat 1128
>dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC12 Length = 74613 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 263 tcaatctgaatggtcacatgactgatgttgtactctgccttgatgtacccaatgaccttg 322 |||||||||||||| || |||||||||||||| || ||||||||| |||| |||||| Sbjct: 43938 tcaatctgaatggtgacgtgactgatgttgtattccctcttgatgtagtcaataaccttg 43997 Query: 323 tca 325 ||| Sbjct: 43998 tca 44000
>ref|NM_116059.2| Arabidopsis thaliana MTPA1; efflux permease/ zinc ion transporter AT3G61940 (MTPA1) mRNA, complete cds Length = 1313 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 612 cccctccaatcattacaccaatgctctg 639 |||||||||||||||| ||||||||||| Sbjct: 832 cccctccaatcattaccccaatgctctg 805 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 485 gtgctctccataaggacttcaagtatgttccgaatcatctt 525 ||||||||||| || |||||||||||| | |||| |||||| Sbjct: 959 gtgctctccattagaacttcaagtatgcttcgaagcatctt 919
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 612 cccctccaatcattacaccaatgctctg 639 |||||||||||||||| ||||||||||| Sbjct: 100765 cccctccaatcattaccccaatgctctg 100738 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 485 gtgctctccataaggacttcaagtatgttccgaatcatctt 525 ||||||||||| || |||||||||||| | |||| |||||| Sbjct: 100892 gtgctctccattagaacttcaagtatgcttcgaagcatctt 100852
>emb|BX822125.1|CNS0A5V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 612 cccctccaatcattacaccaatgctctg 639 |||||||||||||||| ||||||||||| Sbjct: 832 cccctccaatcattaccccaatgctctg 805 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 485 gtgctctccataaggacttcaagtatgttccgaatcatctt 525 ||||||||||| || |||||||||||| | |||| |||||| Sbjct: 959 gtgctctccattagaacttcaagtatgcttcgaagcatctt 919
>gb|U50072.1| Caenorhabditis elegans cosmid K06B9, complete sequence Length = 31737 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 ggctaaaaattgtctggaaatt 40 |||||||||||||||||||||| Sbjct: 20367 ggctaaaaattgtctggaaatt 20346
>dbj|AB201239.1| Nicotiana glauca mRNA for NGMTP1, complete cds Length = 1257 Score = 44.1 bits (22), Expect = 0.60 Identities = 49/58 (84%) Strand = Plus / Minus Query: 362 acatggcatgccaagagcaccttccccactgtgatagcccagatgtgcagctcatgga 419 |||||||| ||||||||||| || || ||||| || ||||| ||||||| ||||||| Sbjct: 1148 acatggcaagccaagagcactttgccgactgtaatcgcccatatgtgcaattcatgga 1091
>emb|AL391559.13| Human DNA sequence from clone RP3-470J8 on chromosome 6, complete sequence Length = 85766 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tccccactgtgatagcccaga 404 ||||||||||||||||||||| Sbjct: 63535 tccccactgtgatagcccaga 63555
>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence Length = 162840 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gcattttatcagcatccacat 347 ||||||||||||||||||||| Sbjct: 96523 gcattttatcagcatccacat 96543
>gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complete sequence Length = 220878 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 ccttccccactgtgatagccc 401 ||||||||||||||||||||| Sbjct: 143695 ccttccccactgtgatagccc 143675
>gb|AC148600.2| Xenopus tropicalis clone CH216-62H10, complete sequence Length = 162075 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 367 gcatgccaagagcaccttccccactgtga 395 ||||||||||| ||||||||| ||||||| Sbjct: 111137 gcatgccaagaacaccttccctactgtga 111109
>ref|NM_179478.2| Arabidopsis thaliana unknown protein AT1G55325 mRNA, complete cds Length = 6267 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cccaatgaccttgtcaagca 329 |||||||||||||||||||| Sbjct: 944 cccaatgaccttgtcaagca 963
>gb|AC140109.4| Mus musculus BAC clone RP24-156A17 from chromosome 3, complete sequence Length = 130716 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tgtcaagcattttatcagca 340 |||||||||||||||||||| Sbjct: 125404 tgtcaagcattttatcagca 125385
>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete sequence Length = 201483 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 cttccccactgtgatagccc 401 |||||||||||||||||||| Sbjct: 89095 cttccccactgtgatagccc 89114
>gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 gttgtactctgccttgatgtaccc 312 ||||||||||||| |||||||||| Sbjct: 31484 gttgtactctgccatgatgtaccc 31507
>ref|XM_761327.1| Theileria parva strain Muguga chromosome 1 DNA polymerase delta catalytic subunit (TP01_0899) partial mRNA Length = 3288 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 atataatattttctccagca 138 |||||||||||||||||||| Sbjct: 2520 atataatattttctccagca 2501
>gb|AC100511.12| Mus musculus chromosome 3, clone RP23-144N19, complete sequence Length = 200790 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ggggctaaaaattgtctgga 36 |||||||||||||||||||| Sbjct: 97678 ggggctaaaaattgtctgga 97697
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tccataaggacttcaagtat 510 |||||||||||||||||||| Sbjct: 83529 tccataaggacttcaagtat 83510
>emb|BX511032.6| Zebrafish DNA sequence from clone CH211-114B16 in linkage group 6, complete sequence Length = 183388 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 aggacttcaagtatgttccg 516 |||||||||||||||||||| Sbjct: 50201 aggacttcaagtatgttccg 50220
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 tccataaggacttcaagtat 510 |||||||||||||||||||| Sbjct: 17848512 tccataaggacttcaagtat 17848531
>gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete sequence Length = 101954 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cccaatgaccttgtcaagca 329 |||||||||||||||||||| Sbjct: 38847 cccaatgaccttgtcaagca 38828
>gb|AC139697.5| Homo sapiens 3 BAC RP11-812D23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70339 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gtacatataatattttctcc 134 |||||||||||||||||||| Sbjct: 42505 gtacatataatattttctcc 42486
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 tccataaggacttcaagtat 510 |||||||||||||||||||| Sbjct: 17857765 tccataaggacttcaagtat 17857784
>gb|AC135118.3| Mus musculus BAC clone RP24-450N10 from 3, complete sequence Length = 188353 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tgtcaagcattttatcagca 340 |||||||||||||||||||| Sbjct: 33595 tgtcaagcattttatcagca 33576 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,557,262 Number of Sequences: 3902068 Number of extensions: 5557262 Number of successful extensions: 103540 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103287 Number of HSP's gapped (non-prelim): 244 length of query: 688 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 665 effective length of database: 17,143,297,704 effective search space: 11400292973160 effective search space used: 11400292973160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)