>PRP17_MOUSE (Q9DC48) Pre-mRNA-splicing factor PRP17 (Cell division cycle 40|
           homolog)
          Length = 579

 Score = 39.7 bits (91), Expect(2) = 4e-04
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -1

Query: 484 ETSKVATCGWDGVIKYWD 431
           ETSKV TCGWDG+IK WD
Sbjct: 562 ETSKVITCGWDGLIKLWD 579



 Score = 22.7 bits (47), Expect(2) = 4e-04
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 515 VCIGCEWHP 489
           VCIG  WHP
Sbjct: 552 VCIGAVWHP 560

>PRP17_HUMAN (O60508) Pre-mRNA-splicing factor PRP17 (hPRP17) (Cell division|
           cycle 40 homolog) (EH-binding protein 3) (Ehb3)
          Length = 579

 Score = 39.7 bits (91), Expect(2) = 4e-04
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -1

Query: 484 ETSKVATCGWDGVIKYWD 431
           ETSKV TCGWDG+IK WD
Sbjct: 562 ETSKVITCGWDGLIKLWD 579



 Score = 22.7 bits (47), Expect(2) = 4e-04
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 515 VCIGCEWHP 489
           VCIG  WHP
Sbjct: 552 VCIGAVWHP 560

>NORM_AGRT5 (Q8UDF5) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 465

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +3

Query: 357 ILVNSLACGLAASRGTFLSKWPKF*SQYFMTPSHPHVATLL 479
           I++ ++ACG+A   G   +  P+F +++F+ P  P  A +L
Sbjct: 328 IMIYAIACGIALCGGILFAAVPEFLAKWFLDPKLPEAAEVL 368


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,511,148
Number of Sequences: 219361
Number of extensions: 1701346
Number of successful extensions: 4410
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4410
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)