ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags33a22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ495775.1|HVU495775 Hordeum vulgare mRNA for putative MAP k... 880 0.0
2gb|AY881102.1| Triticum aestivum putative MAPK protein kinase (M... 440 e-120
3gb|AY881103.1| Triticum aestivum putative MAPK protein kinase (M... 404 e-109
4gb|DQ444321.1| Triticum aestivum mitogen-activated protein kinas... 321 1e-84
5emb|AJ786397.2| Festuca arundinacea mRNA for mitogen-activated p... 151 3e-33
6gb|AF194415.1| Oryza sativa MAP kinase homolog (MAPK1) mRNA, com... 62 2e-06
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
8dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10gb|AF177392.1|AF177392 Oryza sativa blast and wounding induced m... 62 2e-06
11dbj|AK066531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
12dbj|AK070823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
13dbj|AK067925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
14gb|AY112477.1| Zea mays CL9707_1 mRNA sequence 56 1e-04
15ref|XM_001004331.1| PREDICTED: Mus musculus RIKEN cDNA 9130230N0... 40 6.7
16gb|AC145792.2| Xenopus tropicalis clone CH216-150M20, complete s... 40 6.7
17ref|XM_974618.1| PREDICTED: Mus musculus RIKEN cDNA 9130230N09 g... 40 6.7
18ref|XM_986326.1| PREDICTED: Mus musculus RIKEN cDNA 9130230N09 g... 40 6.7
19gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosom... 40 6.7
20gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, c... 40 6.7
21emb|AL772364.20| Mouse DNA sequence from clone RP23-242C19 on ch... 40 6.7
22dbj|AK020289.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 40 6.7
23gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.7
24ref|NM_210341.1| Eremothecium gossypii AER128Wp (AER128W), mRNA 40 6.7

>emb|AJ495775.1|HVU495775 Hordeum vulgare mRNA for putative MAP kinase
          Length = 2276

 Score =  880 bits (444), Expect = 0.0
 Identities = 489/500 (97%), Gaps = 4/500 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaatgttcgacagcgaaacaggnacagcgttcagatgtcttgctctgttcgttacaatca 60
            |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2201 gaatgttcaacagcgaaacagg-acagcgttcagatgtcttgctctgttcgttacaatca 2143

                                                                        
Query: 61   tgcatagatgatatgtgtaggaactaatcccggtgttacatctgtaatcttgagtgtaaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 tgcatagatgatatgtgtaggaactaatcccggtgttacatctgtaatcttgagtgtaaa 2083

                                                                        
Query: 121  aatacatcaacccatgcagggcaacagttcctgcgtgcagca-gcgatgcttggcaggat 179
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2082 aatacatcaacccatgcagggcaacagttcctgcgtgcagcaagcgatgcttggcaggat 2023

                                                                        
Query: 180  ca-cacactcgctaaacaatctccaacttgtatgc-agtgcttccctaggaccgcactgc 237
            || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2022 caacacactcgntaaacaatctccaacttgtatgccagtgcttccctaggaccgcactgc 1963

                                                                        
Query: 238  tttgctatcagcatccggtgtacctgacggaaatgagaaatgcggtgccgacttccgtca 297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1962 tttgctatcagcatccggtgtacctgacggaaatgagaaatgcggtgccgacttccgtca 1903

                                                                        
Query: 298  tcggcgctgcactaggcatgcatcttggagaccttctcggatagtccgtcgacggcccct 357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 tcggcgctgcactaggcatgcatcttggagaccttctcggatagtccgtcgacggcccct 1843

                                                                        
Query: 358  tccgtttcctcagagatcgcatcgtcatactctggctgtttattcgggttgacaacgaca 417
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1842 tccgtttcctcggagatcgcatcgtcatactctggctgtttattcgggttgacaacgaca 1783

                                                                        
Query: 418  cacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctcaagctgntggng 477
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 1782 cacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctcaagctggtgggg 1723

                                
Query: 478  ctcanaccattctggccaac 497
            |||| ||||||||| |||||
Sbjct: 1722 ctcagaccattctgaccaac 1703



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>gb|AY881102.1| Triticum aestivum putative MAPK protein kinase (MAPK1a) mRNA,
            complete cds
          Length = 2356

 Score =  440 bits (222), Expect = e-120
 Identities = 255/267 (95%)
 Strand = Plus / Minus

                                                                        
Query: 231  gcactgctttgctatcagcatccggtgtacctgacggaaatgagaaatgcggtgccgact 290
            ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 2104 gcactgctttgctatcagcatccggtgtacctgacagaaatgagaaatgtggtgccgact 2045

                                                                        
Query: 291  tccgtcatcggcgctgcactaggcatgcatcttggagaccttctcggatagtccgtcgac 350
            |||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2044 tccgtcgttgttgctgcactaggcatgcatcttggagaccttctcggatagtccgtcgac 1985

                                                                        
Query: 351  ggccccttccgtttcctcagagatcgcatcgtcatactctggctgtttattcgggttgac 410
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1984 ggccccttccgtttcctcagagatcgcgtcgtcatactctggctgtttattcgggttgac 1925

                                                                        
Query: 411  aacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctcaagct 470
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 aacgacgcacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctcaagct 1865

                                       
Query: 471  gntggngctcanaccattctggccaac 497
            | | | ||||| |||||||||||||||
Sbjct: 1864 ggtagggctcagaccattctggccaac 1838



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/100 (88%), Gaps = 2/100 (2%)
 Strand = Plus / Minus

                                                                        
Query: 109  cttgagtgtaaaaatacatcaacccatgcagggcaacagttcctgcgtgcagcagcgatg 168
            |||||||||||||||||||||| |||||||||||  |||  ||||||||||||| ||| |
Sbjct: 2206 cttgagtgtaaaaatacatcaatccatgcagggc--cagcccctgcgtgcagcaacgacg 2149

                                                    
Query: 169  cttggcaggatcacacactcgctaaacaatctccaacttg 208
            |||| ||||| ||  |||||||||||| ||||||||||||
Sbjct: 2148 cttgacaggaacatgcactcgctaaaccatctccaacttg 2109



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>gb|AY881103.1| Triticum aestivum putative MAPK protein kinase (MAPK1b) mRNA,
            complete cds
          Length = 2153

 Score =  404 bits (204), Expect = e-109
 Identities = 243/257 (94%)
 Strand = Plus / Minus

                                                                        
Query: 241  gctatcagcatccggtgtacctgacggaaatgagaaatgcggtgccgacttccgtcatcg 300
            ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 1889 gctatcagcatccggtgtacctgacagaaatgagaaatgcggtgccgacttccgtcgtcg 1830

                                                                        
Query: 301  gcgctgcactaggcatgcatcttggagaccttctcggatagtccgtcgacggccccttcc 360
              ||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| 
Sbjct: 1829 ttgctgcactaggcatgcatctttgagaccttctcggatagtccatcgacggctccttct 1770

                                                                        
Query: 361  gtttcctcagagatcgcatcgtcatactctggctgtttattcgggttgacaacgacacac 420
            ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1769 gtttcctcagagatcgcgtcgtcatactctggctgtttattcgggttgacaacgacgcac 1710

                                                                        
Query: 421  ttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctcaagctgntggngctc 480
            |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 1709 ttggaagcgctaatgctcgcgctcttgaggtaggtccgcgagctcaagctggtggggctc 1650

                             
Query: 481  anaccattctggccaac 497
            | |||||||||||||||
Sbjct: 1649 agaccattctggccaac 1633



 Score =  149 bits (75), Expect = 1e-32
 Identities = 180/212 (84%), Gaps = 16/212 (7%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaatgttcgacagcgaaacaggnacagcgttcagatgtcttgctctgttcgtt---acaa 57
            |||| ||||||||||||||| | |||||||  |||||||||||||||||||||   ||||
Sbjct: 2105 gaattttcgacagcgaaacatg-acagcgtcaagatgtcttgctctgttcgttgttacaa 2047

                                                                        
Query: 58   tcatgcatagatgatatgtgtaggaactaatcccggtgttacatctgtaatcttgagtgt 117
            |||||||||||||||| ||||||||||||||||| ||||||||         ||||||||
Sbjct: 2046 tcatgcatagatgataggtgtaggaactaatcccagtgttaca---------ttgagtgt 1996

                                                                        
Query: 118  aaaaatacatcaacccatgcagggcaacagttcctgcgtgcagcagcgatgcttggcagg 177
            ||||||||||||| |||||||||||  ||| ||||| |||||||| ||| ||||| ||||
Sbjct: 1995 aaaaatacatcaatccatgcagggc--cagctcctgtgtgcagcaacgacgcttgacagg 1938

                                            
Query: 178  atcacacact-cgctaaacaatctccaacttg 208
            | ||  |||| |||||||| ||||||||||||
Sbjct: 1937 aacatgcactccgctaaaccatctccaacttg 1906



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>gb|DQ444321.1| Triticum aestivum mitogen-activated protein kinase (MAPK1f) mRNA,
            complete cds
          Length = 1748

 Score =  321 bits (162), Expect = 1e-84
 Identities = 186/195 (95%)
 Strand = Plus / Minus

                                                                        
Query: 303  gctgcactaggcatgcatcttggagaccttctcggatagtccgtcgacggccccttccgt 362
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1748 gctgcactaggcatgcatcttggagaccttctcggatagtccatcgacggccccttccgt 1689

                                                                        
Query: 363  ttcctcagagatcgcatcgtcatactctggctgtttattcgggttgacaacgacacactt 422
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 ttcctcagagattgcatcgtcatactctggctgtttattcgggttgacaacgacacactt 1629

                                                                        
Query: 423  ggaagcactaatgctcgcgctcttgaggtaggtccgcgagctcaagctgntggngctcan 482
            |||||||||||||||||||||||||||||||||||||||||| |||||  | | ||||| 
Sbjct: 1628 ggaagcactaatgctcgcgctcttgaggtaggtccgcgagcttaagctagttgggctcag 1569

                           
Query: 483  accattctggccaac 497
            ||||||| |||||||
Sbjct: 1568 accattcgggccaac 1554



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>emb|AJ786397.2| Festuca arundinacea mRNA for mitogen-activated protein kinase 2
            (mapk2 gene)
          Length = 1898

 Score =  151 bits (76), Expect = 3e-33
 Identities = 127/144 (88%)
 Strand = Plus / Minus

                                                                        
Query: 303  gctgcactaggcatgcatcttggagaccttctcggatagtccgtcgacggccccttccgt 362
            |||||||||||  ||||||||||||||||| ||||||||| |  ||| |||| | |||||
Sbjct: 1509 gctgcactaggggtgcatcttggagaccttttcggatagttcagcgatggcctcctccgt 1450

                                                                        
Query: 363  ttcctcagagatcgcatcgtcatactctggctgtttattcgggttgacaacgacacactt 422
            ||||||||||||  | |||||||||||| | ||||||||||| ||||||||||||||| |
Sbjct: 1449 ttcctcagagatttcttcgtcatactctcgttgtttattcggattgacaacgacacacct 1390

                                    
Query: 423  ggaagcactaatgctcgcgctctt 446
            |||||| |||||||||||||||||
Sbjct: 1389 ggaagcgctaatgctcgcgctctt 1366



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 51   gttacaatcatgcatagatgata 73
            |||||||||||||||||||||||
Sbjct: 1826 gttacaatcatgcatagatgata 1804



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  atcttgagtgtaaaaataca 126
            ||||||||||||||||||||
Sbjct: 1739 atcttgagtgtaaaaataca 1720



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>gb|AF194415.1| Oryza sativa MAP kinase homolog (MAPK1) mRNA, complete cds
          Length = 2032

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 406  ttgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctc 465
            |||||| ||||||||||||||||||||||||| || ||||| || ||| ||| ||| |||
Sbjct: 1543 ttgacagcgacacacttggaagcactaatgcttgcactcttcagatagctcctcgaactc 1484

               
Query: 466  aag 468
            |||
Sbjct: 1483 aag 1481



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 406      ttgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctc 465
                |||||| ||||||||||||||||||||||||| || ||||| || ||| ||| ||| |||
Sbjct: 29438172 ttgacagcgacacacttggaagcactaatgcttgcactcttcagatagctcctcgaactc 29438113

                   
Query: 466      aag 468
                |||
Sbjct: 29438112 aag 29438110



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>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0621D05
          Length = 180250

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                          
Query: 406    ttgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctc 465
              |||||| ||||||||||||||||||||||||| || ||||| || ||| ||| ||| |||
Sbjct: 149053 ttgacagcgacacacttggaagcactaatgcttgcactcttcagatagctcctcgaactc 148994

                 
Query: 466    aag 468
              |||
Sbjct: 148993 aag 148991



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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0655A07
          Length = 172473

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 406  ttgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctc 465
            |||||| ||||||||||||||||||||||||| || ||||| || ||| ||| ||| |||
Sbjct: 2678 ttgacagcgacacacttggaagcactaatgcttgcactcttcagatagctcctcgaactc 2619

               
Query: 466  aag 468
            |||
Sbjct: 2618 aag 2616



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>gb|AF177392.1|AF177392 Oryza sativa blast and wounding induced mitogen-activated protein
            kinase (BWMK1) mRNA, complete cds
          Length = 2092

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 406  ttgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctc 465
            |||||| ||||||||||||||||||||||||| || ||||| || ||| ||| ||| |||
Sbjct: 1439 ttgacagcgacacacttggaagcactaatgcttgcactcttcagatagctcctcgaactc 1380

               
Query: 466  aag 468
            |||
Sbjct: 1379 aag 1377



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>dbj|AK066531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K13, full
            insert sequence
          Length = 2452

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 406  ttgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctc 465
            |||||| ||||||||||||||||||||||||| || ||||| || ||| ||| ||| |||
Sbjct: 1893 ttgacagcgacacacttggaagcactaatgcttgcactcttcagatagctcctcgaactc 1834

               
Query: 466  aag 468
            |||
Sbjct: 1833 aag 1831



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>dbj|AK070823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065I07, full
           insert sequence
          Length = 1044

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 406 ttgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctc 465
           |||||| ||||||||||||||||||||||||| || ||||| || ||| ||| ||| |||
Sbjct: 561 ttgacagcgacacacttggaagcactaatgcttgcactcttcagatagctcctcgaactc 502

              
Query: 466 aag 468
           |||
Sbjct: 501 aag 499



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>dbj|AK067925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121F14, full
            insert sequence
          Length = 2737

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 406  ttgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctc 465
            |||||| ||||||||||||||||||||||||| || ||||| || ||| ||| ||| |||
Sbjct: 2123 ttgacagcgacacacttggaagcactaatgcttgcactcttcagatagctcctcgaactc 2064

               
Query: 466  aag 468
            |||
Sbjct: 2063 aag 2061



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>gb|AY112477.1| Zea mays CL9707_1 mRNA sequence
          Length = 993

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 407 tgacaacgacacacttggaagcactaatgctcgcgctcttgaggtaggtccgcgagctca 466
           |||||||||| ||||||||||| || ||||| || ||||| |||||| |||| ||||| |
Sbjct: 438 tgacaacgacgcacttggaagcgcttatgcttgcactcttcaggtagctccgagagctta 497

               
Query: 467 agct 470
           ||||
Sbjct: 498 agct 501



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>ref|XM_001004331.1| PREDICTED: Mus musculus RIKEN cDNA 9130230N09 gene (9130230N09Rik),
           mRNA
          Length = 3725

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  cagcgttcagatgtcttgct 44
           ||||||||||||||||||||
Sbjct: 804 cagcgttcagatgtcttgct 823



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>gb|AC145792.2| Xenopus tropicalis clone CH216-150M20, complete sequence
          Length = 44807

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  tgagtgtaaaaatacatcaa 130
            ||||||||||||||||||||
Sbjct: 3962 tgagtgtaaaaatacatcaa 3981



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>ref|XM_974618.1| PREDICTED: Mus musculus RIKEN cDNA 9130230N09 gene (9130230N09Rik),
           mRNA
          Length = 3725

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  cagcgttcagatgtcttgct 44
           ||||||||||||||||||||
Sbjct: 804 cagcgttcagatgtcttgct 823



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>ref|XM_986326.1| PREDICTED: Mus musculus RIKEN cDNA 9130230N09 gene (9130230N09Rik),
           mRNA
          Length = 3725

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  cagcgttcagatgtcttgct 44
           ||||||||||||||||||||
Sbjct: 804 cagcgttcagatgtcttgct 823



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>gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosome 19, complete sequence
          Length = 146015

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 310    taggcatgcatcttggagaccttc 333
              |||||||| |||||||||||||||
Sbjct: 142678 taggcatgtatcttggagaccttc 142655



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>gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence
          Length = 212387

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 310    taggcatgcatcttggagaccttc 333
              |||||||| |||||||||||||||
Sbjct: 166507 taggcatgtatcttggagaccttc 166530



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>emb|AL772364.20| Mouse DNA sequence from clone RP23-242C19 on chromosome 11 Contains a
             ribosomal protein S16 (Rps16) pseudogene, the B3gnt1 gene
             for beta-1,3-N-acetylglucosaminyltransferase 1, the Murr1
             gene for U2af1-rs1 region 1, the U2af1-rs1 gene for U2
             small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
             (related sequence 1) and two CpG islands, complete
             sequence
          Length = 210863

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    cagcgttcagatgtcttgct 44
             ||||||||||||||||||||
Sbjct: 94505 cagcgttcagatgtcttgct 94486



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>dbj|AK020289.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
          library, clone:9130230N09 product:unclassifiable, full
          insert sequence
          Length = 896

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 25 cagcgttcagatgtcttgct 44
          ||||||||||||||||||||
Sbjct: 96 cagcgttcagatgtcttgct 77



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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    cttccgtttcctcagagatc 375
              ||||||||||||||||||||
Sbjct: 882127 cttccgtttcctcagagatc 882108



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>ref|NM_210341.1| Eremothecium gossypii AER128Wp (AER128W), mRNA
          Length = 2409

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 356  cttccgtttcctcagagatc 375
            ||||||||||||||||||||
Sbjct: 1204 cttccgtttcctcagagatc 1185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,109,980
Number of Sequences: 3902068
Number of extensions: 3109980
Number of successful extensions: 48272
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48217
Number of HSP's gapped (non-prelim): 47
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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