>emb|AL021396.8|HS971N18 Human DNA sequence from clone RP5-971N18 on chromosome 20p12 Contains
             the PHKBP1 pseudogene (phosphorylase kinase, beta
             pseudogene 1), two novel genes and a CpG island, complete
             sequence
          Length = 125729

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 243   actactgcctcgacctcttggg 264
             ||||||||||||||||||||||
Sbjct: 70654 actactgcctcgacctcttggg 70633

>dbj|AB193031.1| Corynebacterium glutamicum DNA, strain specific island 4, strain: R
          Length = 22572

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 10   tgaaatgaaaccgacttttgt 30
            |||||||||||||||||||||
Sbjct: 1877 tgaaatgaaaccgacttttgt 1897

>gb|AC019109.9| Homo sapiens BAC clone RP11-488C22 from 2, complete sequence
          Length = 165351

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     taagcatatcaaacacactga 54
              |||||||||||||||||||||
Sbjct: 134584 taagcatatcaaacacactga 134604

>gb|AC102603.11| Mus musculus chromosome 14, clone RP23-385I17, complete sequence
          Length = 204565

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   ttacattgaatcaacttatt 470
             ||||||||||||||||||||
Sbjct: 30235 ttacattgaatcaacttatt 30216

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     caacactacctattccttga 231
               ||||||||||||||||||||
Sbjct: 2223250 caacactacctattccttga 2223231

>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     caacactacctattccttga 231
               ||||||||||||||||||||
Sbjct: 2202121 caacactacctattccttga 2202102

>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     caacactacctattccttga 231
               ||||||||||||||||||||
Sbjct: 2202103 caacactacctattccttga 2202084

>gb|AC117937.4| Canis familiaris clone RP81-182F3, complete sequence
          Length = 152861

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aaaggagctaaaagctgatg 74
             ||||||||||||||||||||
Sbjct: 92903 aaaggagctaaaagctgatg 92884

>emb|CT025612.11| Mouse DNA sequence from clone RP23-430O20 on chromosome 9, complete
              sequence
          Length = 185954

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    ttctaatatgaaaacaaggg 182
              ||||||||||||||||||||
Sbjct: 182395 ttctaatatgaaaacaaggg 182414

>emb|Z81086.1|CEF53B6 Caenorhabditis elegans Cosmid F53B6, complete sequence
          Length = 32412

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   acaagggacaaaaaactaac 195
             ||||||||||||||||||||
Sbjct: 26822 acaagggacaaaaaactaac 26803

>gb|AC091507.2| Sus scrofa clone RP44-397B10, complete sequence
          Length = 174031

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 603   agagcaaaagcaactgctat 622
             ||||||||||||||||||||
Sbjct: 37902 agagcaaaagcaactgctat 37921

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     caacactacctattccttga 231
               ||||||||||||||||||||
Sbjct: 2250286 caacactacctattccttga 2250267

>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 34      taagcatatcaaacacactg 53
               ||||||||||||||||||||
Sbjct: 3108460 taagcatatcaaacacactg 3108441

>emb|AL353733.14| Human DNA sequence from clone RP11-143N16 on chromosome 9, complete
           sequence
          Length = 95442

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 22  gacttttgtatgtaagcatatcaaacac 49
           ||||||||||||||| ||||| ||||||
Sbjct: 704 gacttttgtatgtaaacatattaaacac 731

>emb|AL353598.12| Human DNA sequence from clone RP11-470J20 on chromosome 9 Contains
            the 3' end of the AKAP2 (PALM2) gene for A kinase (PRKA)
            anchor protein 2 (paralemmin 2) and a novel gene,
            complete sequence
          Length = 76468

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ttttgtatgtaagcatatca 44
            ||||||||||||||||||||
Sbjct: 5405 ttttgtatgtaagcatatca 5386

>gb|DQ118123.1| Koi herpesvirus isolate Israel clone replicon 1 genomic sequence
          Length = 570

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 96  tcatctggagcatgtacaag 115
           ||||||||||||||||||||
Sbjct: 312 tcatctggagcatgtacaag 293

>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence
          Length = 189722

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 641   aaaacatgaaactggagtct 660
             ||||||||||||||||||||
Sbjct: 58759 aaaacatgaaactggagtct 58740

>gb|AC023464.11| Homo sapiens chromosome 8, clone RP11-436D19, complete sequence
          Length = 160370

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   tgaaaacaagggacaaaaaa 190
             ||||||||||||||||||||
Sbjct: 75211 tgaaaacaagggacaaaaaa 75192

>emb|BX470204.13| Zebrafish DNA sequence from clone CH211-63C23 in linkage group 10,
             complete sequence
          Length = 185190

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   atgcagactttcatagctaa 302
             ||||||||||||||||||||
Sbjct: 99361 atgcagactttcatagctaa 99380

>gb|AC154584.3| Mus musculus BAC clone RP23-248M3 from chromosome 13, complete sequence
          Length = 166580

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    atatcaaacacactgaaaag 58
             ||||||||||||||||||||
Sbjct: 51140 atatcaaacacactgaaaag 51159

>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete
              sequence
          Length = 191270

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 170    atgaaaacaagggacaaaaaacta 193
              ||||||| ||||||||||||||||
Sbjct: 116265 atgaaaataagggacaaaaaacta 116288

>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     caacactacctattccttga 231
               ||||||||||||||||||||
Sbjct: 2201997 caacactacctattccttga 2201978

>gb|AC153601.6| Mus musculus 6 BAC RP23-405O6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 201911

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    catatcaaacacactgaaaa 57
             ||||||||||||||||||||
Sbjct: 61314 catatcaaacacactgaaaa 61333

>emb|AL773601.11| Zebrafish DNA sequence from clone CH211-199O1, complete sequence
          Length = 201299

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   cttgaatttaggctgaacta 246
             ||||||||||||||||||||
Sbjct: 34294 cttgaatttaggctgaacta 34313

>gb|AC073434.42| Mus musculus strain C57BL/6J chromosome 9 clone rp23-159l13, complete
              sequence
          Length = 184073

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ttctaatatgaaaacaaggg 182
              ||||||||||||||||||||
Sbjct: 180811 ttctaatatgaaaacaaggg 180792

>dbj|AP001870.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2206F6, complete
             sequence
          Length = 114285

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aagcatatcaaacacactga 54
             ||||||||||||||||||||
Sbjct: 75899 aagcatatcaaacacactga 75918


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,447,844
Number of Sequences: 3902068
Number of extensions: 5447844
Number of successful extensions: 94919
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94686
Number of HSP's gapped (non-prelim): 233
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)