ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32l15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, comple... 46 0.14
2emb|AL590131.8| Human DNA sequence from clone RP13-102H20 on chr... 44 0.56
3emb|AL671979.5| Mouse DNA sequence from clone RP23-314B7 on chro... 44 0.56
4gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete seq... 42 2.2
5emb|AL589994.5| Human DNA sequence from clone RP4-724P12 on chro... 42 2.2
6gb|AC006206.3| Homo sapiens 12 BAC RPCI11-319E16 (Roswell Park C... 42 2.2
7dbj|AK090144.1| Mus musculus 16 days neonate male medulla oblong... 42 2.2
8gb|AC007564.10| Homo sapiens 12 BAC RP11-513P18 (Roswell Park Ca... 42 2.2
9gb|AC112267.4| Mus musculus BAC clone RP24-84L8 from 9, complete... 42 2.2
10gb|AC132422.3| Mus musculus BAC clone RP23-302G15 from 12, compl... 42 2.2
11gb|AC148005.3| Mus musculus BAC clone RP23-295O6 from 12, comple... 42 2.2
12gb|AC129899.1| Ciona savignyi, clone XX-1073157C8, complete sequ... 40 8.8
13gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome... 40 8.8
14gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosom... 40 8.8
15gb|AC109271.10| Mus musculus chromosome 1, clone RP23-353I19, co... 40 8.8
16emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 i... 40 8.8
17gb|AC123929.4| Mus musculus BAC clone RP24-434E14 from chromosom... 40 8.8
18gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complet... 40 8.8
19gb|AC122287.4| Mus musculus BAC clone RP23-253A15 from 1, comple... 40 8.8
20emb|AL139333.10| Human DNA sequence from clone RP11-536I19 on ch... 40 8.8
21emb|Y00309.1|MMLDHAG Mouse LDH-A gene for lactate dehydrogenase-A 40 8.8
22gb|AC150480.3| Rhinolophus ferrumequinum clone VMRC7-380O7, comp... 40 8.8
23emb|X03753.1|MMALDH1 Mouse LDH-A gene for lactate dehydrogenase ... 40 8.8
24gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 ma... 40 8.8
25dbj|AB232918.1| Oryzias latipes hox gene cluster, complete cds 40 8.8
26gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Ca... 40 8.8
27gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 8.8
28ref|XM_573911.1| PREDICTED: Rattus norvegicus similar to BH3-onl... 40 8.8
29emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, co... 40 8.8
30emb|X60246.1|CPPOLIII2 C.pyrrhogaster Pol III/TAN (1.1kbp) 40 8.8
31emb|CR626877.10| Zebrafish DNA sequence from clone DKEYP-114F9 i... 40 8.8
32emb|AL133502.4|CNS01DVA Human chromosome 14 DNA sequence BAC R-1... 40 8.8
33emb|AL133501.6|CNS01DV9 Human chromosome 14 DNA sequence BAC R-3... 40 8.8
34gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 40 8.8
35gb|AC123689.8| Mus musculus chromosome 15, clone RP23-321P10, co... 40 8.8
36dbj|AP006366.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.8
37gb|AC157602.8| Mus musculus chromosome 15 clone RP23-104H10, com... 40 8.8
38gb|AC164564.3| Mus musculus BAC clone RP23-96N11 from chromosome... 40 8.8
39emb|AL162632.4|CNS01RHX Human chromosome 14 DNA sequence BAC R-4... 40 8.8
40emb|AL359237.4|CNS05TEO Human chromosome 14 DNA sequence BAC R-1... 40 8.8
41emb|AL158059.3|CNS01RGK Human chromosome 14 DNA sequence BAC C-2... 40 8.8
42gb|U05674.1|RNU05674 Rattus norvegicus Sprague Dawley lactate de... 40 8.8 
>gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, complete sequence
          Length = 203739

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 288    catcacaacagcagatgacaaag 310
              |||||||||||||||||||||||
Sbjct: 114308 catcacaacagcagatgacaaag 114286
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>emb|AL590131.8| Human DNA sequence from clone RP13-102H20 on chromosome X Contains gene
             FLJ30058, the 5' end of a novel gene and four CpG islands,
             complete sequence
          Length = 146343

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 371   ccagcaccctgcaaccagcacc 392
             ||||||||||||||||||||||
Sbjct: 47524 ccagcaccctgcaaccagcacc 47503
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>emb|AL671979.5| Mouse DNA sequence from clone RP23-314B7 on chromosome X, complete
             sequence
          Length = 154170

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 177   tactcaaacaaatgctgaatct 198
             ||||||||||||||||||||||
Sbjct: 36992 tactcaaacaaatgctgaatct 37013
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>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence
          Length = 138518

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 540   ccacacaacatgataacaagtgggg 564
             |||||||||||||||| ||||||||
Sbjct: 79934 ccacacaacatgataataagtgggg 79958
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>emb|AL589994.5| Human DNA sequence from clone RP4-724P12 on chromosome 6 Contains a
             pseudogene similar to part of myotubularin related protein
             9 MTMR9, complete sequence
          Length = 69318

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 565   catcttgttcccataatttat 585
             |||||||||||||||||||||
Sbjct: 63896 catcttgttcccataatttat 63916
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>gb|AC006206.3| Homo sapiens 12 BAC RPCI11-319E16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 180388

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 391   cctccccttcttctacagaac 411
             |||||||||||||||||||||
Sbjct: 28573 cctccccttcttctacagaac 28553
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>dbj|AK090144.1| Mus musculus 16 days neonate male medulla oblongata cDNA, RIKEN
            full-length enriched library, clone:G630005F21
            product:unclassifiable, full insert sequence
          Length = 2942

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 526  aaatttgttttaatccacaca 546
            |||||||||||||||||||||
Sbjct: 1454 aaatttgttttaatccacaca 1434
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>gb|AC007564.10| Homo sapiens 12 BAC RP11-513P18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 194397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   caaacaaatgctgaatctaca 201
             |||||||||||||||||||||
Sbjct: 40019 caaacaaatgctgaatctaca 39999
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>gb|AC112267.4| Mus musculus BAC clone RP24-84L8 from 9, complete sequence
          Length = 188376

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 526    aaatttgttttaatccacaca 546
              |||||||||||||||||||||
Sbjct: 145513 aaatttgttttaatccacaca 145533
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>gb|AC132422.3| Mus musculus BAC clone RP23-302G15 from 12, complete sequence
          Length = 151358

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 524    ataaatttgttttaatccaca 544
              |||||||||||||||||||||
Sbjct: 116622 ataaatttgttttaatccaca 116602
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>gb|AC148005.3| Mus musculus BAC clone RP23-295O6 from 12, complete sequence
          Length = 151918

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 524  ataaatttgttttaatccaca 544
            |||||||||||||||||||||
Sbjct: 1709 ataaatttgttttaatccaca 1729
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>gb|AC129899.1| Ciona savignyi, clone XX-1073157C8, complete sequence
          Length = 38548

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 494   tttggctaagctttataaacacca 517
             ||||||||||||||||||| ||||
Sbjct: 36479 tttggctaagctttataaaaacca 36456
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>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete
           sequence
          Length = 193749

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 cagatgacaaaggtgaggga 318
           ||||||||||||||||||||
Sbjct: 392 cagatgacaaaggtgaggga 373
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>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence
          Length = 200592

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   cagatgacaaaggtgaggga 318
             ||||||||||||||||||||
Sbjct: 50936 cagatgacaaaggtgaggga 50917
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>gb|AC109271.10| Mus musculus chromosome 1, clone RP23-353I19, complete sequence
          Length = 221001

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    gcaaccagcacctccccttc 400
              ||||||||||||||||||||
Sbjct: 179486 gcaaccagcacctccccttc 179505
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>emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 in linkage group 7,
             complete sequence
          Length = 135772

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   ttgttttaatccacacaaca 549
             ||||||||||||||||||||
Sbjct: 78677 ttgttttaatccacacaaca 78696
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>gb|AC123929.4| Mus musculus BAC clone RP24-434E14 from chromosome 12, complete
             sequence
          Length = 166035

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 544   acaacatgataacaagtggg 563
             ||||||||||||||||||||
Sbjct: 95813 acaacatgataacaagtggg 95794
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>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence
          Length = 183325

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   cagatgacaaaggtgaggga 318
             ||||||||||||||||||||
Sbjct: 89408 cagatgacaaaggtgaggga 89389
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>gb|AC122287.4| Mus musculus BAC clone RP23-253A15 from 1, complete sequence
          Length = 226926

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    gcaaccagcacctccccttc 400
              ||||||||||||||||||||
Sbjct: 200788 gcaaccagcacctccccttc 200769
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>emb|AL139333.10| Human DNA sequence from clone RP11-536I19 on chromosome 6 Contains the
             3' end of a novel gene, the 5' part of a novel gene
             similar to C21ORF5 (KIAA0933) and a CpG island, complete
             sequence
          Length = 98444

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 491   aattttggctaagctttataaaca 514
             |||||||||||||||| |||||||
Sbjct: 77258 aattttggctaagcttcataaaca 77235
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>emb|Y00309.1|MMLDHAG Mouse LDH-A gene for lactate dehydrogenase-A
          Length = 12851

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  tccagcaccctgcaaccagc 389
            ||||||||||||||||||||
Sbjct: 1817 tccagcaccctgcaaccagc 1836
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>gb|AC150480.3| Rhinolophus ferrumequinum clone VMRC7-380O7, complete sequence
          Length = 171158

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   aatggatggaggagagagga 136
             ||||||||||||||||||||
Sbjct: 37926 aatggatggaggagagagga 37907
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>emb|X03753.1|MMALDH1 Mouse LDH-A gene for lactate dehydrogenase A (exons 1-2)
          Length = 3157

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 370 tccagcaccctgcaaccagc 389
           ||||||||||||||||||||
Sbjct: 238 tccagcaccctgcaaccagc 257
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>gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 map 7, complete sequence
          Length = 223438

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    tccagcaccctgcaaccagc 389
              ||||||||||||||||||||
Sbjct: 132469 tccagcaccctgcaaccagc 132450
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>dbj|AB232918.1| Oryzias latipes hox gene cluster, complete cds
          Length = 268959

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   agtgctcctccttagatgga 446
             ||||||||||||||||||||
Sbjct: 24363 agtgctcctccttagatgga 24344
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>gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194851

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 595    tatgtatgatgcatgatgca 614
              ||||||||||||||||||||
Sbjct: 182222 tatgtatgatgcatgatgca 182241
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    aatggatggaggagagagga 136
              ||||||||||||||||||||
Sbjct: 451540 aatggatggaggagagagga 451521
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>ref|XM_573911.1| PREDICTED: Rattus norvegicus similar to BH3-only member B protein
           (LOC498630), mRNA
          Length = 7165

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 343 ctcagacatgcatgtggtcg 362
           ||||||||||||||||||||
Sbjct: 945 ctcagacatgcatgtggtcg 964



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 343 ctcagacatgcatgtggtcg 362
           ||||||||||||||||||||
Sbjct: 897 ctcagacatgcatgtggtcg 916



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 343 ctcagacatgcatgtggtcg 362
           ||||||||||||||||||||
Sbjct: 849 ctcagacatgcatgtggtcg 868
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>emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, complete sequence
          Length = 152686

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   ttgttttaatccacacaaca 549
             ||||||||||||||||||||
Sbjct: 79118 ttgttttaatccacacaaca 79137
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>emb|X60246.1|CPPOLIII2 C.pyrrhogaster Pol III/TAN (1.1kbp)
          Length = 1077

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 tacattctccaacatatgct 217
           ||||||||||||||||||||
Sbjct: 770 tacattctccaacatatgct 789
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>emb|CR626877.10| Zebrafish DNA sequence from clone DKEYP-114F9 in linkage group 19,
             complete sequence
          Length = 173824

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   aattttggctaagctttata 510
             ||||||||||||||||||||
Sbjct: 77772 aattttggctaagctttata 77753
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>emb|AL133502.4|CNS01DVA Human chromosome 14 DNA sequence BAC R-180L10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173292

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    tggatggaggagagaggagg 138
              ||||||||||||||||||||
Sbjct: 118954 tggatggaggagagaggagg 118935
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>emb|AL133501.6|CNS01DV9 Human chromosome 14 DNA sequence BAC R-35B20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181838

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   aaatggatggaggagagagg 135
             ||||||||||||||||||||
Sbjct: 17966 aaatggatggaggagagagg 17985
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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 210     catatgctgcttcaattaat 229
               ||||||||||||||||||||
Sbjct: 1374914 catatgctgcttcaattaat 1374895
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>gb|AC123689.8| Mus musculus chromosome 15, clone RP23-321P10, complete sequence
          Length = 218071

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 602    gatgcatgatgcattatgat 621
              ||||||||||||||||||||
Sbjct: 128746 gatgcatgatgcattatgat 128765
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>dbj|AP006366.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT35C03, TM0176a,
              complete sequence
          Length = 119525

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    cacctccccttcttctacag 408
              ||||||||||||||||||||
Sbjct: 106437 cacctccccttcttctacag 106456



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   cacctccccttcttctacag 408
             ||||||||||||||||||||
Sbjct: 87256 cacctccccttcttctacag 87275
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>gb|AC157602.8| Mus musculus chromosome 15 clone RP23-104H10, complete sequence
          Length = 211648

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 602    gatgcatgatgcattatgat 621
              ||||||||||||||||||||
Sbjct: 198486 gatgcatgatgcattatgat 198467
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>gb|AC164564.3| Mus musculus BAC clone RP23-96N11 from chromosome 7, complete sequence
          Length = 247415

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   cagatgacaaaggtgaggga 318
             ||||||||||||||||||||
Sbjct: 71442 cagatgacaaaggtgaggga 71423



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   cagatgacaaaggtgaggga 318
             ||||||||||||||||||||
Sbjct: 41503 cagatgacaaaggtgaggga 41522
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>emb|AL162632.4|CNS01RHX Human chromosome 14 DNA sequence BAC R-454K7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 161417

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    aaatggatggaggagagagg 135
              ||||||||||||||||||||
Sbjct: 112455 aaatggatggaggagagagg 112474
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>emb|AL359237.4|CNS05TEO Human chromosome 14 DNA sequence BAC R-1152H15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162119

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   atttgttttaatccacacaa 547
             ||||||||||||||||||||
Sbjct: 38672 atttgttttaatccacacaa 38691
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>emb|AL158059.3|CNS01RGK Human chromosome 14 DNA sequence BAC C-2007A10 of library CalTech-D
            from chromosome 14 of Homo sapiens (Human), complete
            sequence
          Length = 148515

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 528  atttgttttaatccacacaa 547
            ||||||||||||||||||||
Sbjct: 8491 atttgttttaatccacacaa 8472
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>gb|U05674.1|RNU05674 Rattus norvegicus Sprague Dawley lactate dehydrogenase A subunit
           gene, promoter region
          Length = 1192

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 370 tccagcaccctgcaaccagc 389
           ||||||||||||||||||||
Sbjct: 281 tccagcaccctgcaaccagc 300


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,340,269
Number of Sequences: 3902068
Number of extensions: 6340269
Number of successful extensions: 134873
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134710
Number of HSP's gapped (non-prelim): 163
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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