ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags33a05 |
|---|---|
| Clone Library Name | barley_pub |
>PTD4_HUMAN (Q9NTK5) Putative GTP-binding protein PTD004| Length = 396 Score = 136 bits (343), Expect = 5e-32 Identities = 65/93 (69%), Positives = 76/93 (81%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 + L YFFTAG EV+ W IR+ +KAPQAAG IHTDFE+GFI AEVMK+ED KE GSE+AV Sbjct: 303 LQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAV 362 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 361 KAAGKYRQ+G+ Y+V+DGDIIFFKFN KK Sbjct: 363 KAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKK 395
>PTD4_MOUSE (Q9CZ30) Putative GTP-binding protein PTD004 homolog| Length = 396 Score = 135 bits (340), Expect = 1e-31 Identities = 64/93 (68%), Positives = 76/93 (81%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 + L YFFTAG EV+ W IR+ +KAPQAAG IHTDFE+GFI AEVMK+ED K+ GSE+AV Sbjct: 303 LQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKDEGSENAV 362 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 361 KAAGKYRQ+G+ Y+V+DGDIIFFKFN KK Sbjct: 363 KAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKK 395
>YCHF_CAEEL (P91917) Putative GTP-binding protein W08E3.3| Length = 395 Score = 125 bits (314), Expect = 1e-28 Identities = 59/90 (65%), Positives = 69/90 (76%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 + L YFFT+G EVK W I+ + AP+AAG IHTDFE+GFI AEVMK DL ELG E+ Sbjct: 300 LQLEYFFTSGEDEVKAWTIQVGTPAPKAAGRIHTDFEKGFIMAEVMKVADLIELGDEAKC 359 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNVSGG 370 KA GKYRQ+GKTY+VQDGD+IFFKFN G Sbjct: 360 KAGGKYRQQGKTYIVQDGDVIFFKFNAGAG 389
>YBN5_YEAST (P38219) Putative GTP-binding protein YBR025C| Length = 394 Score = 102 bits (253), Expect = 1e-21 Identities = 53/92 (57%), Positives = 65/92 (70%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 + LI FFT G EV+ W IRR +KAPQAAG IH D FI A+VMK ED+ E +SA+ Sbjct: 305 LDLISFFTCGPDEVREWTIRRGTKAPQAAGVIHNDLMNTFILAQVMKCEDVFEYKDDSAI 364 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGK 364 KAAGK Q+GK YVV+DGDII+F+ +G GK Sbjct: 365 KAAGKLMQKGKDYVVEDGDIIYFR---AGAGK 393
>ENGD_BACSU (P37518) GTP-dependent nucleic acid-binding protein engD| Length = 366 Score = 100 bits (249), Expect = 4e-21 Identities = 48/85 (56%), Positives = 59/85 (69%) Frame = -3 Query: 633 LIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAVKA 454 L +FTAG EV+ W ++ KAP+ AG IH+DFERGFI AE + +EDL G + K Sbjct: 282 LATYFTAGEQEVRAWTFKKGMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKE 341 Query: 453 AGKYRQEGKTYVVQDGDIIFFKFNV 379 AGK R EGK YVVQDGD+I F+FNV Sbjct: 342 AGKVRLEGKEYVVQDGDVIHFRFNV 366
>ENGD_HAEIN (P44681) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 98.2 bits (243), Expect = 2e-20 Identities = 45/87 (51%), Positives = 62/87 (71%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++L +FTAG EV+ W + + AP+AA IHTDFE+GFI AEV+ +ED + E+ Sbjct: 276 LNLQTYFTAGVKEVRAWTVSVGATAPKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGA 335 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K AGK+R EGK Y+VQDGD++ F+FNV Sbjct: 336 KEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>ENGD_HAEDU (Q7VMI2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 96.3 bits (238), Expect = 7e-20 Identities = 44/87 (50%), Positives = 62/87 (71%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++L +FTAG EV+ W + + AP+AA IHTDFE+GFI AEV+ ++D + E+ Sbjct: 276 LNLQTYFTAGVKEVRAWTVAVGATAPKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGA 335 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K AGK+R EGK Y+VQDGD++ F+FNV Sbjct: 336 KEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>ENGD_PASMU (Q9CP90) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 94.7 bits (234), Expect = 2e-19 Identities = 44/87 (50%), Positives = 62/87 (71%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++L +FTAG EV+ W I + AP++A IHTDFE+GFI AEV+ ++D + E+ Sbjct: 276 LNLQTYFTAGVKEVRAWTIPIGATAPKSAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGA 335 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K AGK+R EGK Y+VQDGD++ F+FNV Sbjct: 336 KEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>ENGD_BUCAP (Q8K9V2) GTP-dependent nucleic acid-binding protein engD| Length = 361 Score = 94.0 bits (232), Expect = 3e-19 Identities = 48/87 (55%), Positives = 60/87 (68%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++LI FFTAG EV+ W I S + QAA IH+DF RGFI A+++ + D + SE+ V Sbjct: 275 LNLITFFTAGIKEVRAWAIPNGSTSLQAADKIHSDFRRGFIRAQIINYLDFIKYKSETKV 334 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K AGKYR EGK Y +QDGDII F FNV Sbjct: 335 KEAGKYRSEGKFYQIQDGDIINFLFNV 361
>ENGD_SHIFL (P0ABU4) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 93.2 bits (230), Expect = 6e-19 Identities = 46/87 (52%), Positives = 58/87 (66%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++L +FTAG EV+ W I + APQAAG IHTDFE+GFI A+ + FED E Sbjct: 276 LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGA 335 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K AGK R EGK Y+V+DGD++ F FNV Sbjct: 336 KEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_ECOLI (P0ABU2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 93.2 bits (230), Expect = 6e-19 Identities = 46/87 (52%), Positives = 58/87 (66%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++L +FTAG EV+ W I + APQAAG IHTDFE+GFI A+ + FED E Sbjct: 276 LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGA 335 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K AGK R EGK Y+V+DGD++ F FNV Sbjct: 336 KEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_ECO57 (P0ABU3) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 93.2 bits (230), Expect = 6e-19 Identities = 46/87 (52%), Positives = 58/87 (66%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++L +FTAG EV+ W I + APQAAG IHTDFE+GFI A+ + FED E Sbjct: 276 LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGA 335 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K AGK R EGK Y+V+DGD++ F FNV Sbjct: 336 KEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_BUCAI (P57288) GTP-dependent nucleic acid-binding protein engD| Length = 361 Score = 89.0 bits (219), Expect = 1e-17 Identities = 42/87 (48%), Positives = 58/87 (66%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++LI FFT G E++ W I S + +AA IH+DF +GFI A+++K+ D SE+ + Sbjct: 275 LNLITFFTVGDKEIRAWAIPNGSTSIEAAHKIHSDFSKGFIRAQIIKYVDFITYKSEAKI 334 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K GK+R EGK Y +QDGDII F FNV Sbjct: 335 KEMGKFRTEGKQYYIQDGDIIHFLFNV 361
>YEAD_SCHPO (O14078) Hypothetical GTP-binding protein UNK4.13c in chromosome I| Length = 407 Score = 85.5 bits (210), Expect = 1e-16 Identities = 40/84 (47%), Positives = 57/84 (67%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++LI++FTA V+ W I SKAP AAG IH+DF++ F+ EV+KF D ++ S A Sbjct: 321 LNLIHYFTASEKIVQAWTIADGSKAPDAAGIIHSDFKKKFVAGEVIKFSDFEKYKSVDAC 380 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFK 388 K+ GK + +GK Y V+ GDIIF+K Sbjct: 381 KSVGKCKTKGKDYTVEPGDIIFWK 404
>Y024_MYCGE (P47270) Probable GTP-binding protein MG024| Length = 367 Score = 83.6 bits (205), Expect = 5e-16 Identities = 40/88 (45%), Positives = 56/88 (63%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++L FFT G EV+ W ++ APQ AG IH+DFE+GFI EV+ ++ L + S Sbjct: 280 LNLWSFFTFGKKEVRAWTFKKGWNAPQCAGQIHSDFEKGFIKVEVISWDQLFAMKSLQEA 339 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNVS 376 K G R EGK Y+++DGD+ FKFNV+ Sbjct: 340 KKQGLIRLEGKNYLIKDGDVCNFKFNVT 367
>YLF2_YEAST (P38746) Putative GTP-binding protein YLF2| Length = 405 Score = 79.7 bits (195), Expect = 7e-15 Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 3/95 (3%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELG---SE 469 ++LI FFT G EV W IR + A +AAG IH+D FI A+V+K++DLK++ +E Sbjct: 311 LNLISFFTCGPQEVHQWNIREGTTAQEAAGVIHSDLRETFISADVIKYDDLKKMEPPLNE 370 Query: 468 SAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGK 364 S +K+ G ++ GK Y++QD DI FK + GGK Sbjct: 371 SLLKSKGLIKRAGKQYIMQDNDIALFK---AAGGK 402
>ENGD_BUCBP (Q89AR6) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/87 (43%), Positives = 49/87 (56%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 ++LI FFTAG EV W Q+ IHTD +GFI A+V+ ++D + E Sbjct: 276 LNLITFFTAGKKEVHAWTTTNNLFIFQSVKCIHTDLSKGFIRAQVISYDDFIKYKGEKRS 335 Query: 459 KAAGKYRQEGKTYVVQDGDIIFFKFNV 379 K GK R EGK YV+ DGDII +NV Sbjct: 336 KELGKIRIEGKRYVICDGDIIHVLYNV 362
>Y026_MYCPN (P75088) Probable GTP-binding protein MG024 homolog (B01_orf362)| Length = 362 Score = 62.4 bits (150), Expect = 1e-09 Identities = 34/71 (47%), Positives = 40/71 (56%) Frame = -3 Query: 639 IHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAV 460 I L FFT G EV+ W ++ APQ AG IHTDFERGFI EV+ + L EL S Sbjct: 280 IGLWSFFTFGKQEVRAWAFKKGWLAPQCAGEIHTDFERGFIKVEVISWNQLYELKSLQEA 339 Query: 459 KAAGKYRQEGK 427 K G R G+ Sbjct: 340 KKQGLVRLRGQ 350
>DHP2_CAEEL (Q18677) Dihydropyrimidinase 2 (EC 3.5.2.2) (CeCRMP/DHP-2) (UlipA)| Length = 520 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = -3 Query: 474 SESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK**IHHRVVYFSIFEFTQVLSV 298 S A K Y Q+G+ V D DI+ + N + K HH + F+IFE QV V Sbjct: 372 STMAAKIFNCYPQKGRIAVGSDADIVIWNANATRTISK-DTHHHAIDFNIFEGMQVHGV 429
>DHP2_CAEBR (Q61YQ1) Dihydropyrimidinase 2 (EC 3.5.2.2)| Length = 518 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = -3 Query: 474 SESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK**IHHRVVYFSIFEFTQVLSV- 298 S A K Y ++G+ V D DI+ + N + K HH + F+IFE QV V Sbjct: 372 STMAAKIFNCYPRKGRIAVGSDADIVVWNANATRTISK-DTHHHAIDFNIFEGMQVHGVP 430 Query: 297 LIADCAGRV 271 C GR+ Sbjct: 431 ETTICRGRI 439
>ZN239_HUMAN (Q16600) Zinc finger protein 239 (Zinc finger protein MOK-2)| (HOK-2) Length = 458 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = -2 Query: 385 QCFWRWKEVMNSSQGRVF*HFRVHPGTISTDCRLCGKGISTNWK 254 QC+ K SS R+ H RVH G C CGKG S + K Sbjct: 376 QCYECGKGFSQSSDLRI--HLRVHTGEKPYHCGKCGKGFSQSSK 417
>ZNF41_HUMAN (P51814) Zinc finger protein 41| Length = 821 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -2 Query: 337 VF*HFRVHPGTISTDCRLCGKGISTNWKGGIYKFSFT 227 +F H R+H G +C CGKG S N I++ + T Sbjct: 412 LFRHLRIHTGEKPYECSECGKGFSQNSDLSIHQKTHT 448
>ZBED4_HUMAN (O75132) Zinc finger BED domain-containing protein 4| Length = 1171 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -2 Query: 379 FWRWKEVMNSSQGRVF*HFRVHP-GTISTDCRLCGKGISTNWKGGI 245 F + K+VM + V+ HF + P ++ +CR CG IS KG + Sbjct: 447 FQQNKKVMKRLKSEVWHHFSLAPMDSLKAECRYCGCAISRGKKGDV 492
>KLOT_MOUSE (O35082) Klotho precursor (EC 3.2.1.31) [Contains: Klotho peptide]| Length = 1014 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = -3 Query: 591 WQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAVKAAGKYRQEGKTYVVQ 412 W ++ AP+AAG +H F GF+ A +GS +A + G +RQ GK + Sbjct: 44 WARFARAPAPEAAGLLHDTFPDGFLWA----------VGS-AAYQTEGGWRQHGKGASIW 92 Query: 411 D 409 D Sbjct: 93 D 93
>ZN285_HUMAN (Q96NJ3) Zinc finger protein 285| Length = 435 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -2 Query: 328 HFRVHPGTISTDCRLCGKGISTN 260 H RVH G C+ CGKG S N Sbjct: 375 HLRVHTGERPYKCKACGKGFSRN 397
>ZN341_HUMAN (Q9BYN7) Zinc finger protein 341| Length = 854 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -2 Query: 328 HFRVHPGTISTDCRLCGKGISTNWKGGIYKFSFTLL 221 H + H +S C LCGK + + G++++S +LL Sbjct: 493 HIKSHQEELSYRCHLCGKDFPSLYDLGVHQYSHSLL 528
>ZN227_HUMAN (Q86WZ6) Zinc finger protein 227| Length = 799 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -2 Query: 328 HFRVHPGTISTDCRLCGKGIS 266 HFRVH G C+ CGKG S Sbjct: 482 HFRVHTGEKPYKCKECGKGFS 502
>GLMM_LACPL (Q88YE8) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 451 Score = 30.0 bits (66), Expect = 6.0 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 16/71 (22%) Frame = -3 Query: 531 ERGFICAEVMKFEDLKELGSESAVKAAG---KYRQEGKTYVV-------------QDGDI 400 ERG + + + + LG A++AAG K Q G YVV Q G + Sbjct: 274 ERGKLKQDTVVTTVMSNLGLYKALEAAGLHSKQTQVGDRYVVEEMLKDGYNLGGEQSGHV 333 Query: 399 IFFKFNVSGGG 367 +F FN +G G Sbjct: 334 VFLDFNTTGDG 344
>ZN225_HUMAN (Q9UK10) Zinc finger protein 225| Length = 706 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -2 Query: 328 HFRVHPGTISTDCRLCGKGISTN 260 H RVH G + C CGKG TN Sbjct: 390 HVRVHSGETTFKCEECGKGFYTN 412
>ZFP27_MOUSE (P10077) Zinc finger protein 27 (Zfp-27) (mKR4 protein)| Length = 819 Score = 30.0 bits (66), Expect = 6.0 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 Query: 337 VF*HFRVHPGTISTDCRLCGKGISTN 260 +F H R+H G DC CGKG S N Sbjct: 248 LFRHRRIHTGEKLYDCSHCGKGFSYN 273
>ZN155_HUMAN (Q12901) Zinc finger protein 155| Length = 538 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -2 Query: 328 HFRVHPGTISTDCRLCGKGISTN 260 H RVH G S C CGKG TN Sbjct: 390 HQRVHSGEKSFKCEECGKGFYTN 412
>ZN620_PONPY (Q5RB33) Zinc finger protein 620| Length = 422 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -2 Query: 385 QCFWRWKEVMNSSQGRVF*HFRVHPGTISTDCRLCGKGISTN 260 +C WK SS V H R+H G +C+ CGK +S+N Sbjct: 309 ECNECWKTFSCSSSFTV--HQRMHTGEKPYECKECGKRLSSN 348
>ZN620_HUMAN (Q6ZNG0) Zinc finger protein 620| Length = 422 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -2 Query: 385 QCFWRWKEVMNSSQGRVF*HFRVHPGTISTDCRLCGKGISTN 260 +C WK SS V H R+H G +C+ CGK +S+N Sbjct: 309 ECNECWKTFSCSSSFTV--HQRMHTGEKPYECKECGKRLSSN 348 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,205,326 Number of Sequences: 219361 Number of extensions: 2004674 Number of successful extensions: 8374 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 5461 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8353 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
