ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32l01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104346.1| Zea mays PCO082145 mRNA sequence Length = 1817 Score = 343 bits (173), Expect = 4e-91 Identities = 344/401 (85%) Strand = Plus / Minus Query: 196 tctccacgctcgaaaacggcggctgcacccatcccagaacctatgcacatagaaattact 255 ||||| |||||||| || || || |||||||||||||||||||||||||||||||| ||| Sbjct: 1518 tctccccgctcgaacacagcagcagcacccatcccagaacctatgcacatagaaatcact 1459 Query: 256 ccaaaccggcagtccttgcctcggcgcttcatctcgttgagaagagtgctgacacatcgc 315 || |||||||| |||||||| |||||||||||||| ||||||||||| ||||| || || Sbjct: 1458 ccgaaccggcaatccttgccgcggcgcttcatctcattgagaagagtactgacgcaccgt 1399 Query: 316 gcacctgtggcacccaatggatgtccaagagcaattgcacctccattaacattgactttt 375 |||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||| Sbjct: 1398 gcacctgtagcacccaacggatgtccaagggccattgcaccgccattaacattgacttta 1339 Query: 376 gcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaagcctcatta 435 || ||||| || | |||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 1338 gcaggatcaagtttcaacttcttgcagcagtagacatactgagatgcaaaagcctcattg 1279 Query: 436 atctcaaaaaggtcgacatcattaatttgaagacccgcggccttcactgctgctgggata 495 || || ||||| |||| ||||| || ||||| || || || ||||||||||| ||||| Sbjct: 1278 atttcgaaaagatcgatatcatccatctgaaggccagcagctttcactgctgcggggatt 1219 Query: 496 gcaacagcaggaccaacacccatcacagctggatcaactccaacggcagcaaagctcctg 555 || || |||||||||| |||||| |||||||||||||||||||| || |||||| |||| Sbjct: 1218 gctacggcaggaccaatacccattacagctggatcaactccaacagcggcaaaggtccta 1159 Query: 556 tagattccaagaattggaagacctttctgtgtagcaacatc 596 ||| ||||||| ||||||||| |||| |||||||||| Sbjct: 1158 aagacaccaagaactggaagacccttcttcatagcaacatc 1118
>ref|NM_196831.1| Oryza sativa (japonica cultivar-group) putative thiolase (OSJNBa0018F16.7), mRNA Length = 1778 Score = 331 bits (167), Expect = 2e-87 Identities = 347/407 (85%) Strand = Plus / Minus Query: 172 gcattcgtcagctcatccaccgcatctccacgctcgaaaacggcggctgcacccatccca 231 ||||| || ||||||||||| ||||| |||||||| || || || || || ||||| ||| Sbjct: 1421 gcattagtgagctcatccactgcatccccacgctcaaagacagcagcagcccccatgcca 1362 Query: 232 gaacctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcg 291 |||||||||||||| ||||| || ||||| || ||||| ||||| || |||||||| ||| Sbjct: 1361 gaacctatgcacatggaaatcacaccaaatcgacagtctttgccccgtcgcttcatttcg 1302 Query: 292 ttgagaagagtgctgacacatcgcgcacctgtggcacccaatggatgtccaagagcaatt 351 |||||||| || |||||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 1301 ttgagaagggtactgacagaccgtgcacctgtagcacccaatggatgcccaagagccatt 1242 Query: 352 gcacctccattaacattgacttttgcgggatcgagatccaactttttggagcagtacaca 411 |||||||| ||||| || |||||||| ||||| || ||||||| ||| ||||||| || Sbjct: 1241 gcacctccgttaacgttaacttttgcaggatcaagtcccaacttcttgcagcagtatacg 1182 Query: 412 tactgagatgcaaaagcctcattaatctcaaaaaggtcgacatcattaatttgaagaccc 471 ||||| |||||||| |||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 1181 tactgtgatgcaaaggcctcattaatctcgaaaaggtcaacatcatctatttgaagacca 1122 Query: 472 gcggccttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatca 531 || || |||||||| || ||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 1121 gcagctttcactgccgcagggatggcaacagcaggaccaacacccattatagctggatca 1062 Query: 532 actccaacggcagcaaagctcctgtagattccaagaattggaagacc 578 |||||||| || |||||||||||| ||| |||| ||||||||||| Sbjct: 1061 actccaactgctgcaaagctcctgaagacgccaactattggaagacc 1015
>dbj|AK072460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121H13, full insert sequence Length = 1808 Score = 331 bits (167), Expect = 2e-87 Identities = 347/407 (85%) Strand = Plus / Minus Query: 172 gcattcgtcagctcatccaccgcatctccacgctcgaaaacggcggctgcacccatccca 231 ||||| || ||||||||||| ||||| |||||||| || || || || || ||||| ||| Sbjct: 1571 gcattagtgagctcatccactgcatccccacgctcaaagacagcagcagcccccatgcca 1512 Query: 232 gaacctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcg 291 |||||||||||||| ||||| || ||||| || ||||| ||||| || |||||||| ||| Sbjct: 1511 gaacctatgcacatggaaatcacaccaaatcgacagtctttgccccgtcgcttcatttcg 1452 Query: 292 ttgagaagagtgctgacacatcgcgcacctgtggcacccaatggatgtccaagagcaatt 351 |||||||| || |||||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 1451 ttgagaagggtactgacagaccgtgcacctgtagcacccaatggatgcccaagagccatt 1392 Query: 352 gcacctccattaacattgacttttgcgggatcgagatccaactttttggagcagtacaca 411 |||||||| ||||| || |||||||| ||||| || ||||||| ||| ||||||| || Sbjct: 1391 gcacctccgttaacgttaacttttgcaggatcaagtcccaacttcttgcagcagtatacg 1332 Query: 412 tactgagatgcaaaagcctcattaatctcaaaaaggtcgacatcattaatttgaagaccc 471 ||||| |||||||| |||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 1331 tactgtgatgcaaaggcctcattaatctcgaaaaggtcaacatcatctatttgaagacca 1272 Query: 472 gcggccttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatca 531 || || |||||||| || ||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 1271 gcagctttcactgccgcagggatggcaacagcaggaccaacacccattatagctggatca 1212 Query: 532 actccaacggcagcaaagctcctgtagattccaagaattggaagacc 578 |||||||| || |||||||||||| ||| |||| ||||||||||| Sbjct: 1211 actccaactgctgcaaagctcctgaagacgccaactattggaagacc 1165
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 428 cctcattaatctcaaaaaggtcgacatcattaatttgaagacccgcggccttcactgctg 487 ||||||||||||| |||||||| ||||||| ||||||||||| || || |||||||| | Sbjct: 143478 cctcattaatctcgaaaaggtcaacatcatctatttgaagaccagcagctttcactgccg 143419 Query: 488 ctgggatagcaacagcaggaccaacacccatcacagctggatcaactccaacggcagcaa 547 | ||||| ||||||||||||||||||||||| | |||||||||||||||||| || |||| Sbjct: 143418 cagggatggcaacagcaggaccaacacccattatagctggatcaactccaactgctgcaa 143359 Query: 548 agctcct 554 ||||||| Sbjct: 143358 agctcct 143352 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 318 acctgtggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttgc 377 |||||| |||||||||||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 143667 acctgtagcacccaatggatgcccaagagccattgcacctccgttaacgttaacttttgc 143608 Query: 378 gggatcgagatccaactttttggagcagtacacatactgagatgcaaaagcct 430 ||||| || ||||||| ||| ||||||| || ||||| |||||||| |||| Sbjct: 143607 aggatcaagtcccaacttcttgcagcagtatacgtactgtgatgcaaaggcct 143555 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 234 acctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgtt 293 |||||||||||| ||||| || ||||| || ||||| ||||| || |||||||| ||||| Sbjct: 143873 acctatgcacatggaaatcacaccaaatcgacagtctttgccccgtcgcttcatttcgtt 143814 Query: 294 gagaagagtgctgacacatcgcgcacctg 322 |||||| || |||||| | || ||||||| Sbjct: 143813 gagaagggtactgacagaccgtgcacctg 143785 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Minus Query: 172 gcattcgtcagctcatccaccgcatctccacgctcgaaaacggcggctgcacccatccca 231 ||||| || ||||||||||| ||||| |||||||| || || || || || ||||| ||| Sbjct: 144023 gcattagtgagctcatccactgcatccccacgctcaaagacagcagcagcccccatgcca 143964 Query: 232 gaacct 237 |||||| Sbjct: 143963 gaacct 143958
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Plus Query: 428 cctcattaatctcaaaaaggtcgacatcattaatttgaagacccgcggccttcactgctg 487 ||||||||||||| |||||||| ||||||| ||||||||||| || || |||||||| | Sbjct: 93494 cctcattaatctcgaaaaggtcaacatcatctatttgaagaccagcagctttcactgccg 93553 Query: 488 ctgggatagcaacagcaggaccaacacccatcacagctggatcaactccaacggcagcaa 547 | ||||| ||||||||||||||||||||||| | |||||||||||||||||| || |||| Sbjct: 93554 cagggatggcaacagcaggaccaacacccattatagctggatcaactccaactgctgcaa 93613 Query: 548 agctcct 554 ||||||| Sbjct: 93614 agctcct 93620 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 318 acctgtggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttgc 377 |||||| |||||||||||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 93305 acctgtagcacccaatggatgcccaagagccattgcacctccgttaacgttaacttttgc 93364 Query: 378 gggatcgagatccaactttttggagcagtacacatactgagatgcaaaagcct 430 ||||| || ||||||| ||| ||||||| || ||||| |||||||| |||| Sbjct: 93365 aggatcaagtcccaacttcttgcagcagtatacgtactgtgatgcaaaggcct 93417 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 234 acctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgtt 293 |||||||||||| ||||| || ||||| || ||||| ||||| || |||||||| ||||| Sbjct: 93099 acctatgcacatggaaatcacaccaaatcgacagtctttgccccgtcgcttcatttcgtt 93158 Query: 294 gagaagagtgctgacacatcgcgcacctg 322 |||||| || |||||| | || ||||||| Sbjct: 93159 gagaagggtactgacagaccgtgcacctg 93187 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Plus Query: 172 gcattcgtcagctcatccaccgcatctccacgctcgaaaacggcggctgcacccatccca 231 ||||| || ||||||||||| ||||| |||||||| || || || || || ||||| ||| Sbjct: 92949 gcattagtgagctcatccactgcatccccacgctcaaagacagcagcagcccccatgcca 93008 Query: 232 gaacct 237 |||||| Sbjct: 93009 gaacct 93014
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 428 cctcattaatctcaaaaaggtcgacatcattaatttgaagacccgcggccttcactgctg 487 ||||||||||||| |||||||| ||||||| ||||||||||| || || |||||||| | Sbjct: 16264589 cctcattaatctcgaaaaggtcaacatcatctatttgaagaccagcagctttcactgccg 16264530 Query: 488 ctgggatagcaacagcaggaccaacacccatcacagctggatcaactccaacggcagcaa 547 | ||||| ||||||||||||||||||||||| | |||||||||||||||||| || |||| Sbjct: 16264529 cagggatggcaacagcaggaccaacacccattatagctggatcaactccaactgctgcaa 16264470 Query: 548 agctcct 554 ||||||| Sbjct: 16264469 agctcct 16264463 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 318 acctgtggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttgc 377 |||||| |||||||||||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 16264778 acctgtagcacccaatggatgcccaagagccattgcacctccgttaacgttaacttttgc 16264719 Query: 378 gggatcgagatccaactttttggagcagtacacatactgagatgcaaaagcct 430 ||||| || ||||||| ||| ||||||| || ||||| |||||||| |||| Sbjct: 16264718 aggatcaagtcccaacttcttgcagcagtatacgtactgtgatgcaaaggcct 16264666 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 234 acctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgtt 293 |||||||||||| ||||| || ||||| || ||||| ||||| || |||||||| ||||| Sbjct: 16264984 acctatgcacatggaaatcacaccaaatcgacagtctttgccccgtcgcttcatttcgtt 16264925 Query: 294 gagaagagtgctgacacatcgcgcacctg 322 |||||| || |||||| | || ||||||| Sbjct: 16264924 gagaagggtactgacagaccgtgcacctg 16264896 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 341 caagagcaattgcacctccattaacattgacttttgcgggatcgagatccaactttttgg 400 ||||||| ||||||||||| ||||| || |||||||| ||||| || ||||||| ||| Sbjct: 20546948 caagagccattgcacctccgttaacgttaacttttgcaggatcaagtcccaacttcttgc 20547007 Query: 401 agcagtacacatactgagatgcaaaa 426 ||||||| | |||||||| |||||| Sbjct: 20547008 agcagtatgcgtactgagaagcaaaa 20547033 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 496 gcaacagcaggaccaacacccatcacagctgg 527 ||||||||||||||||||||||| |||||||| Sbjct: 20547173 gcaacagcaggaccaacacccattacagctgg 20547204 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 428 cctcattaatctcaaaaaggtcgacatcattaatttgaagacc 470 ||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 20547116 cctcattaatctcgaaaaggtcaacatcatctatttgaagacc 20547158 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Minus Query: 172 gcattcgtcagctcatccaccgcatctccacgctcgaaaacggcggctgcacccatccca 231 ||||| || ||||||||||| ||||| |||||||| || || || || || ||||| ||| Sbjct: 16265134 gcattagtgagctcatccactgcatccccacgctcaaagacagcagcagcccccatgcca 16265075 Query: 232 gaacct 237 |||||| Sbjct: 16265074 gaacct 16265069
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 428 cctcattaatctcaaaaaggtcgacatcattaatttgaagacccgcggccttcactgctg 487 ||||||||||||| |||||||| ||||||| ||||||||||| || || |||||||| | Sbjct: 16272830 cctcattaatctcgaaaaggtcaacatcatctatttgaagaccagcagctttcactgccg 16272771 Query: 488 ctgggatagcaacagcaggaccaacacccatcacagctggatcaactccaacggcagcaa 547 | ||||| ||||||||||||||||||||||| | |||||||||||||||||| || |||| Sbjct: 16272770 cagggatggcaacagcaggaccaacacccattatagctggatcaactccaactgctgcaa 16272711 Query: 548 agctcct 554 ||||||| Sbjct: 16272710 agctcct 16272704 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 318 acctgtggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttgc 377 |||||| |||||||||||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 16273019 acctgtagcacccaatggatgcccaagagccattgcacctccgttaacgttaacttttgc 16272960 Query: 378 gggatcgagatccaactttttggagcagtacacatactgagatgcaaaagcct 430 ||||| || ||||||| ||| ||||||| || ||||| |||||||| |||| Sbjct: 16272959 aggatcaagtcccaacttcttgcagcagtatacgtactgtgatgcaaaggcct 16272907 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 234 acctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgtt 293 |||||||||||| ||||| || ||||| || ||||| ||||| || |||||||| ||||| Sbjct: 16273225 acctatgcacatggaaatcacaccaaatcgacagtctttgccccgtcgcttcatttcgtt 16273166 Query: 294 gagaagagtgctgacacatcgcgcacctg 322 |||||| || |||||| | || ||||||| Sbjct: 16273165 gagaagggtactgacagaccgtgcacctg 16273137 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 341 caagagcaattgcacctccattaacattgacttttgcgggatcgagatccaactttttgg 400 ||||||| ||||||||||| ||||| || |||||||| ||||| || ||||||| ||| Sbjct: 20558220 caagagccattgcacctccgttaacgttaacttttgcaggatcaagtcccaacttcttgc 20558279 Query: 401 agcagtacacatactgagatgcaaaa 426 ||||||| | |||||||| |||||| Sbjct: 20558280 agcagtatgcgtactgagaagcaaaa 20558305 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 496 gcaacagcaggaccaacacccatcacagctgg 527 ||||||||||||||||||||||| |||||||| Sbjct: 20558445 gcaacagcaggaccaacacccattacagctgg 20558476 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 428 cctcattaatctcaaaaaggtcgacatcattaatttgaagacc 470 ||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 20558388 cctcattaatctcgaaaaggtcaacatcatctatttgaagacc 20558430 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Minus Query: 172 gcattcgtcagctcatccaccgcatctccacgctcgaaaacggcggctgcacccatccca 231 ||||| || ||||||||||| ||||| |||||||| || || || || || ||||| ||| Sbjct: 16273375 gcattagtgagctcatccactgcatccccacgctcaaagacagcagcagcccccatgcca 16273316 Query: 232 gaacct 237 |||||| Sbjct: 16273315 gaacct 16273310
>emb|X75329.1|MITHMF5 M.indica (Manila) THMF5 mRNA for 3-ketoacyl-coA thiolase B Length = 1305 Score = 139 bits (70), Expect = 1e-29 Identities = 277/346 (80%) Strand = Plus / Minus Query: 236 ctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgttga 295 ||||||||||||| || |||||||| |||||||| ||||||| | ||||||||||| | Sbjct: 1294 ctatgcacatagatatcactccaaagcggcagtctctgcctcgcctcttcatctcgtgca 1235 Query: 296 gaagagtgctgacacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcac 355 |||||| |||||| || |||||||| |||||||| |||||||||| || ||||||| Sbjct: 1234 agagagtggcgacacaccgggcacctgttgcacccaaaggatgtccaatggccattgcac 1175 Query: 356 ctccattaacattgacttttgcgggatcgagatccaactttttggagcagtacacatact 415 ||||||||||||||| ||| | ||||| || ||| ||| || ||| || ||| | | Sbjct: 1174 ctccattaacattgatcttttctggatcaaggcccagcttgttacggcaatatacaaatt 1115 Query: 416 gagatgcaaaagcctcattaatctcaaaaaggtcgacatcattaatttgaagacccgcgg 475 | |||||||| |||||||| || |||||||| || | ||||| || || |||||| || | Sbjct: 1114 gggatgcaaatgcctcatttatttcaaaaagatcaatatcatcaagttcaagaccagcag 1055 Query: 476 ccttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactc 535 |||| ||||| ||||| || || ||||| || ||||||||||| | || |||||||| | Sbjct: 1054 ccttaactgcagctggaattgccacagctgggccaacacccatgatggcaggatcaacac 995 Query: 536 caacggcagcaaagctcctgtagattccaagaattggaagaccttt 581 |||| |||||||| ||||| | | ||||||||||| || ||||| Sbjct: 994 caacagcagcaaaagtcctgaatacaccaagaattggtaggccttt 949
>gb|AY383736.1| Glycine max 3-ketoacyl-CoA thiolase mRNA, complete cds Length = 1552 Score = 107 bits (54), Expect = 4e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 478 ttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcca 537 |||||||| |||||||||||||||||||| ||||||||||| || || ||||| |||||| Sbjct: 1076 ttcactgcagctgggatagcaacagcagggccaacacccatgactgcaggatctactcca 1017 Query: 538 acggcagcaaagctcctgtagattccaagaattggaag 575 || |||||||| |||||| |||||||||| || ||||| Sbjct: 1016 acagcagcaaaactcctgaagattccaagtataggaag 979 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 ||||| || |||||||| ||||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 1247 acacagcgtgcacctgtaacacccaaaggatgtccaagagcaatggcaccaccattgaca 1188 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| |||||| || |||| || ||| ||| || |||||||| |||||||| Sbjct: 1187 ttgacctttctgggatcaagtcccaatttcttgaggcaataaacatactgtgatgcaaat 1128 Query: 427 gcctcattaatctcaaa 443 |||||||| || ||||| Sbjct: 1127 gcctcattgatttcaaa 1111
>gb|AY038061.1| Gossypium hirsutum 3-ketoacyl-CoA thiolase mRNA, complete cds Length = 640 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaaaaggtcgacatcattaatttgaagacccg 472 ||||||||||||| |||||||| |||||||| | ||| | ||||| ||| | |||||| | Sbjct: 219 actgagatgcaaatgcctcattgatctcaaacaagtctatatcatcaatctcaagacctg 160 Query: 473 cggccttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaa 532 | | ||| ||||| ||||| ||||||||||||||||| | ||||||||||| ||||| | Sbjct: 159 cagacttgactgcagctggtatagcaacagcaggaccgatgcccatcacagcaggatcta 100 Query: 533 ctccaacggcagcaaagctcctgtagattccaagaattggaagaccttt 581 | ||||| ||||||||||| ||| | | ||||| |||||||| ||||| Sbjct: 99 caccaacagcagcaaagcttctgaaaacaccaaggattggaagtccttt 51 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgttg 294 ||||||||||| || || |||||||| || |||||||| || || ||||||||||||| Sbjct: 397 cctatgcacattgagatcactccaaagcgacagtccttcccacgacgcttcatctcgtac 338 Query: 295 agaagagtgctgacacatcgcgcacctgtggcacccaatggatgtccaagagcaattgca 354 | ||||| | ||||| || |||||||| ||||||| ||||| ||||| || |||||| Sbjct: 337 aacagagttccaacacagcgagcacctgtaacacccaaaggatgcccaagggctattgca 278 Query: 355 cctccattaacattgac 371 ||||||||||||||||| Sbjct: 277 cctccattaacattgac 261
>gb|AY308827.1| Helianthus annuus acetoacetyl CoA thiolase mRNA, complete cds Length = 1350 Score = 89.7 bits (45), Expect = 1e-14 Identities = 164/201 (81%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 ||||| ||||| ||||| |||||||| || ||||||| ||| ||||||||||| || ||| Sbjct: 1202 acacaacgcgcccctgttgcacccaaagggtgtccaatagccattgcacctccgttgaca 1143 Query: 367 ttga-cttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaa 425 |||| |||||| ||| |||| || | |||||| ||| || ||| |||| |||||||| Sbjct: 1142 ttgatcttttgtggg-tcgatttctagctttttttggcaatatacaaactgtgatgcaaa 1084 Query: 426 agcctcattaatctcaaaaaggtcgacatcattaatttgaagacccgcggccttcactgc 485 |||||||| ||||| |||||||| | ||| | ||||||||| || || ||||| ||||| Sbjct: 1083 tgcctcattgatctcgaaaaggtcaatatcgtcaatttgaagcccagcagccttaactgc 1024 Query: 486 tgctgggatagcaacagcagg 506 ||||| || ||||||||||| Sbjct: 1023 agctggaattgcaacagcagg 1003
>ref|XM_468412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1579 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 477 cttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcc 536 ||||||||| ||||| || || || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1156 cttcactgcagctggtattgctactgcaggaccaacacccataacagcaggatctactcc 1097 Query: 537 aacggcagcaaagctcctg 555 ||| ||||||||||||||| Sbjct: 1096 aacagcagcaaagctcctg 1078 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Minus Query: 264 gcagtccttgcctcggcgcttcatctcgttgagaagagtgctgacacatcgcgcacctgt 323 ||||||| |||| ||||||||||| || || |||||||| ||| || || |||||||| Sbjct: 1369 gcagtccctgccccggcgcttcatttcattcagaagagttgcgacgcaccgggcacctgt 1310 Query: 324 ggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttg 376 ||||| | |||||||| || || ||||| |||||||| || || ||||||| Sbjct: 1309 tgcaccaagaggatgtcctagggcgattgcgcctccattcacgtttacttttg 1257
>ref|XM_507050.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.17 patrial mRNA Length = 1582 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 477 cttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcc 536 ||||||||| ||||| || || || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1159 cttcactgcagctggtattgctactgcaggaccaacacccataacagcaggatctactcc 1100 Query: 537 aacggcagcaaagctcctg 555 ||| ||||||||||||||| Sbjct: 1099 aacagcagcaaagctcctg 1081 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Minus Query: 264 gcagtccttgcctcggcgcttcatctcgttgagaagagtgctgacacatcgcgcacctgt 323 ||||||| |||| ||||||||||| || || |||||||| ||| || || |||||||| Sbjct: 1372 gcagtccctgccccggcgcttcatttcattcagaagagttgcgacgcaccgggcacctgt 1313 Query: 324 ggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttg 376 ||||| | |||||||| || || ||||| |||||||| || || ||||||| Sbjct: 1312 tgcaccaagaggatgtcctagggcgattgcgcctccattcacgtttacttttg 1260
>dbj|AK061948.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E07, full insert sequence Length = 1803 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 477 cttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcc 536 ||||||||| ||||| || || || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1154 cttcactgcagctggtattgctactgcaggaccaacacccataacagcaggatctactcc 1095 Query: 537 aacggcagcaaagctcctg 555 ||| ||||||||||||||| Sbjct: 1094 aacagcagcaaagctcctg 1076 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Minus Query: 264 gcagtccttgcctcggcgcttcatctcgttgagaagagtgctgacacatcgcgcacctgt 323 ||||||| |||| ||||||||||| || || |||||||| ||| || || |||||||| Sbjct: 1367 gcagtccctgccccggcgcttcatttcattcagaagagttgcgacgcaccgggcacctgt 1308 Query: 324 ggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttg 376 ||||| | |||||||| || || ||||| |||||||| || || ||||||| Sbjct: 1307 tgcaccaagaggatgtcctagggcgattgcgcctccattcacgtttacttttg 1255
>gb|AY224469.1| Oryza sativa (japonica cultivar-group) isolate 24733 3-ketoacyl-CoA thiolase-like protein mRNA, complete cds Length = 1347 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 477 cttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcc 536 ||||||||| ||||| || || || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1029 cttcactgcagctggtattgctactgcaggaccaacacccataacagcaggatctactcc 970 Query: 537 aacggcagcaaagctcctg 555 ||| ||||||||||||||| Sbjct: 969 aacagcagcaaagctcctg 951 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Minus Query: 264 gcagtccttgcctcggcgcttcatctcgttgagaagagtgctgacacatcgcgcacctgt 323 ||||||| |||| ||||||||||| || || |||||||| ||| || || |||||||| Sbjct: 1242 gcagtccctgccccggcgcttcatttcattcagaagagttgcgacgcaccgggcacctgt 1183 Query: 324 ggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttg 376 ||||| | |||||||| || || ||||| |||||||| || || ||||||| Sbjct: 1182 tgcaccaagaggatgtcctagggcgattgcgcctccattcacgtttacttttg 1130
>dbj|AK069768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030K20, full insert sequence Length = 2045 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 477 cttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcc 536 ||||||||| ||||| || || || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1159 cttcactgcagctggtattgctactgcaggaccaacacccataacagcaggatctactcc 1100 Query: 537 aacggcagcaaagctcctg 555 ||| ||||||||||||||| Sbjct: 1099 aacagcagcaaagctcctg 1081 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Minus Query: 264 gcagtccttgcctcggcgcttcatctcgttgagaagagtgctgacacatcgcgcacctgt 323 ||||||| |||| ||||||||||| || || |||||||| ||| || || |||||||| Sbjct: 1372 gcagtccctgccccggcgcttcatttcattcagaagagttgcgacgcaccgggcacctgt 1313 Query: 324 ggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttg 376 ||||| | |||||||| || || ||||| |||||||| || || ||||||| Sbjct: 1312 tgcaccaagaggatgtcctagggcgattgcgcctccattcacgtttacttttg 1260
>ref|NM_124265.2| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.2 mRNA, complete cds Length = 1726 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 1394 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 1335 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 1334 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 1275 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 1274 gcctcattgatctc 1261 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 1466 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 1409
>ref|NM_001036960.1| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.3 mRNA, complete cds Length = 1610 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 1278 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 1219 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 1218 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 1159 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 1158 gcctcattgatctc 1145 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 1350 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 1293
>ref|NM_180826.1| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.1 mRNA, complete cds Length = 1511 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 1179 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 1120 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 1119 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 1060 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 1059 gcctcattgatctc 1046 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 1251 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 1194
>gb|AY136455.1| Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (At5g48880) mRNA, complete cds Length = 1479 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 1183 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 1124 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 1123 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 1064 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 1063 gcctcattgatctc 1050 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 1255 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 1198
>gb|AY079026.1| Arabidopsis thaliana AT5g48880/K24G6_22 mRNA, complete cds Length = 1612 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 1280 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 1221 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 1220 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 1161 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 1160 gcctcattgatctc 1147 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 1352 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 1295
>dbj|AK220781.1| Arabidopsis thaliana mRNA for peroxisomal-3-keto-acyl-CoA thiolase 1, partial cds, clone: RAFL22-25-I20 Length = 787 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 480 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 421 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 420 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 361 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 360 gcctcattgatctc 347 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 552 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 495
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 477 cttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcc 536 ||||||||| ||||| || || || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 35100612 cttcactgcagctggtattgctactgcaggaccaacacccataacagcaggatctactcc 35100671 Query: 537 aacggcagcaaagctcct 554 ||| |||||||||||||| Sbjct: 35100672 aacagcagcaaagctcct 35100689
>gb|BT002594.1| Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (At5g48880) mRNA, complete cds Length = 1330 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 1082 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 1023 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 1022 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 963 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 962 gcctcattgatctc 949 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 1154 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 1097
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 477 cttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcc 536 ||||||||| ||||| || || || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 73775 cttcactgcagctggtattgctactgcaggaccaacacccataacagcaggatctactcc 73834 Query: 537 aacggcagcaaagctcct 554 ||| |||||||||||||| Sbjct: 73835 aacagcagcaaagctcct 73852
>gb|AF062591.1|AF062591 Arabidopsis thaliana peroxisomal 3-keto-acyl-CoA thiolase 2 precursor (PKT2) mRNA, complete cds Length = 1691 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 1394 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 1335 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 1334 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 1275 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 1274 gcctcattgatctc 1261 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 1466 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 1409
>gb|AF062590.1|AF062590 Arabidopsis thaliana peroxisomal-3-keto-acyl-CoA thiolase 1 (PKT1) mRNA, complete cds Length = 1470 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 307 acacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaaca 366 |||||||| || ||||| ||||||| ||||| |||| |||||| || |||||||||||| Sbjct: 1175 acacatcgagctcctgtagcacccaggggatggccaatagcaatggctcctccattaaca 1116 Query: 367 ttgacttttgcgggatcgagatccaactttttggagcagtacacatactgagatgcaaaa 426 ||||| ||| | ||| || || ||||| ||| | |||||||||||||||||||||| Sbjct: 1115 ttgaccttttccatatccagctctaacttcttgcaagagtacacatactgagatgcaaat 1056 Query: 427 gcctcattaatctc 440 |||||||| ||||| Sbjct: 1055 gcctcattgatctc 1042 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 ||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 1247 cctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 1190
>gb|BT018838.1| Zea mays clone EL01N0552G11.d mRNA sequence Length = 1681 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 499 acagcaggaccaacacccatcacagctggatcaactccaacggcagcaaagctcctg 555 |||||||||||||||||||| ||||||||||| |||||||| || |||||||||||| Sbjct: 1108 acagcaggaccaacacccataacagctggatccactccaacagccgcaaagctcctg 1052 Score = 67.9 bits (34), Expect = 4e-08 Identities = 151/190 (79%) Strand = Plus / Minus Query: 185 catccaccgcatctccacgctcgaaaacggcggctgcacccatcccagaacctatgcaca 244 |||||||||| ||||| |||||||| || || ||||| ||||| ||||| || || |||| Sbjct: 1422 catccaccgcgtctccccgctcgaacacagctgctgcccccattccagatccgatacaca 1363 Query: 245 tagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgttgagaagagtgc 304 | | | || ||||| | |||||| |||| ||||||||||| || || |||||||| Sbjct: 1362 tggtgacaacaccaaatctgcagtctctgccccggcgcttcatttcatttagaagagtag 1303 Query: 305 tgacacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaa 364 ||||| || |||||||| ||||||| || |||||||| ||||| || |||||||| | Sbjct: 1302 ccacacaccgggcacctgttgcacccagagggtgtccaagggcaatcgcgcctccattta 1243 Query: 365 cattgacttt 374 |||| ||||| Sbjct: 1242 catttacttt 1233
>gb|BT017030.1| Zea mays clone EL01N0202B07.c mRNA sequence Length = 839 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 499 acagcaggaccaacacccatcacagctggatcaactccaacggcagcaaagctcct 554 |||||||||||||||||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 318 acagcaggaccaacacccataacagctggatccactccaacagccgcaaagctcct 263 Score = 67.9 bits (34), Expect = 4e-08 Identities = 151/190 (79%) Strand = Plus / Minus Query: 185 catccaccgcatctccacgctcgaaaacggcggctgcacccatcccagaacctatgcaca 244 |||||||||| ||||| |||||||| || || ||||| ||||| ||||| || || |||| Sbjct: 632 catccaccgcgtctccccgctcgaacacagctgctgcccccattccagatccgatacaca 573 Query: 245 tagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgttgagaagagtgc 304 | | | || ||||| | |||||| |||| ||||||||||| || || |||||||| Sbjct: 572 tggtgacaacaccaaatctgcagtctctgccccggcgcttcatttcatttagaagagtag 513 Query: 305 tgacacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaa 364 ||||| || |||||||| ||||||| || |||||||| ||||| || |||||||| | Sbjct: 512 ccacacaccgggcacctgttgcacccagagggtgtccaagggcaatcgcgcctccattta 453 Query: 365 cattgacttt 374 |||| ||||| Sbjct: 452 catttacttt 443
>dbj|D70895.1| Cucurbita cv. Kurokawa Amakuri mRNA for 3-ketoacyl-CoA thiolase, complete cds Length = 1682 Score = 71.9 bits (36), Expect = 2e-09 Identities = 153/192 (79%) Strand = Plus / Minus Query: 327 acccaatggatgtccaagagcaattgcacctccattaacattgacttttgcgggatcgag 386 ||||| ||||||||||| |||||||| || ||||||||||||| ||| | ||||| || Sbjct: 1221 acccagtggatgtccaatggcaattgctccgccattaacattgatcttttctggatcaag 1162 Query: 387 atccaactttttggagcagtacacatactgagatgcaaaagcctcattaatctcaaaaag 446 ||| ||| || || |||||| | || |||||||| |||||||| ||||||||||| Sbjct: 1161 ccccagcttgttacgacaatacacaaattgggatgcaaatgcctcatttatctcaaaaag 1102 Query: 447 gtcgacatcattaatttgaagacccgcggccttcactgctgctgggatagcaacagcagg 506 |||| |||||| | || ||| || || ||||| || || ||||| || |||||||| || Sbjct: 1101 atcgatatcattcagttcaagcccagcagccttgacagccgctggaattgcaacagccgg 1042 Query: 507 accaacacccat 518 ||||||||||| Sbjct: 1041 gccaacacccat 1030 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctc 290 ||||||||||| || || |||||||| || ||||||||||| ||||| |||||||| Sbjct: 1313 cctatgcacattgatatcactccaaaacgacagtccttgccacggcgtttcatctc 1258
>gb|AY103539.1| Zea mays PCO103478 mRNA sequence Length = 2010 Score = 67.9 bits (34), Expect = 4e-08 Identities = 151/190 (79%) Strand = Plus / Minus Query: 185 catccaccgcatctccacgctcgaaaacggcggctgcacccatcccagaacctatgcaca 244 |||||||||| ||||| |||||||| || || ||||| ||||| ||||| || || |||| Sbjct: 1639 catccaccgcgtctccccgctcgaacacagctgctgcccccattccagatccgatacaca 1580 Query: 245 tagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgttgagaagagtgc 304 | | | || ||||| | |||||| |||| ||||||||||| || || |||||||| Sbjct: 1579 tggtgacaacaccaaatctgcagtctctgccccggcgcttcatttcatttagaagagtag 1520 Query: 305 tgacacatcgcgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaa 364 ||||| || |||||||| ||||||| || |||||||| ||||| || |||||||| | Sbjct: 1519 ccacacaccgggcacctgttgcacccagagggtgtccaagggcaatcgcgcctccattta 1460 Query: 365 cattgacttt 374 |||| ||||| Sbjct: 1459 catttacttt 1450 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 502 gcaggaccaacacccatcacagctggatcaactccaacggcagcaaagctcctg 555 ||||||||||| ||||| ||||||||||| |||||||| || |||||||||||| Sbjct: 1322 gcaggaccaacgcccataacagctggatccactccaacagccgcaaagctcctg 1269
>gb|AC126019.16| Medicago truncatula clone mth2-22p22, complete sequence Length = 130044 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 478 ttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcca 537 |||||||| ||||| ||||||| ||| |||||||||||||| ||||| ||||| || ||| Sbjct: 95004 ttcactgcagctggaatagcaaaagctggaccaacacccatgacagcaggatctacacca 94945 Query: 538 acggcagcaaagctcct 554 || |||| ||| ||||| Sbjct: 94944 acagcagaaaaactcct 94928
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 318 acctgtggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttgc 377 |||||| ||||||| ||||| |||| |||||| || ||||||||||||||||| ||| | Sbjct: 69953 acctgtagcacccaggggatggccaatagcaatggctcctccattaacattgaccttttc 70012 Query: 378 gggatcgagatccaactttttggagcagtacacatactgagatgcaaaagcct 430 ||| || || ||||| ||| | |||||||||||||||||||||| |||| Sbjct: 70013 catatccagctctaacttcttgcaagagtacacatactgagatgcaaatgcct 70065 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 234 acctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 |||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 69787 acctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 69845
>gb|AF062589.1|AF062589 Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (PKT2) and 3-keto-acyl-CoA-thiolase 1 (PKT1) genes, complete cds Length = 4938 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 318 acctgtggcacccaatggatgtccaagagcaattgcacctccattaacattgacttttgc 377 |||||| ||||||| ||||| |||| |||||| || ||||||||||||||||| ||| | Sbjct: 4160 acctgtagcacccaggggatggccaatagcaatggctcctccattaacattgaccttttc 4101 Query: 378 gggatcgagatccaactttttggagcagtacacatactgagatgcaaaagcct 430 ||| || || ||||| ||| | |||||||||||||||||||||| |||| Sbjct: 4100 catatccagctctaacttcttgcaagagtacacatactgagatgcaaatgcct 4048 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 234 acctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctcgt 292 |||||||||||| || ||||||||||| ||||| || || |||| ||||||||||||| Sbjct: 4326 acctatgcacattgagattactccaaagcggcaatcttttcctctccgcttcatctcgt 4268
>gb|BT012930.1| Lycopersicon esculentum clone 114093R, mRNA sequence Length = 1732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 121/151 (80%) Strand = Plus / Minus Query: 220 gcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcctcgg 279 |||||||| |||| ||||||||||| || | ||| ||||| |||||||| || || ||| Sbjct: 1423 gcacccattccagtgcctatgcacatggacactacaccaaagcggcagtctttcccacgg 1364 Query: 280 cgcttcatctcgttgagaagagtgctgacacatcgcgcacctgtggcacccaatggatgt 339 ||||||||||| | | || || ||||| || |||||||| |||||||| ||||| Sbjct: 1363 cgcttcatctcatgcaacagcgttgcaacacaccgtgcacctgtagcacccaaaggatga 1304 Query: 340 ccaagagcaattgcacctccattaacattga 370 |||| || |||||||||||||| ||||||| Sbjct: 1303 ccaatggccattgcacctccattgacattga 1273
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 341 caagagcaattgcacctccattaacattgacttttgcgggatcgagatccaactttttgg 400 ||||||| ||||||||||| ||||| || |||||||| ||||| || ||||||| ||| Sbjct: 52238 caagagccattgcacctccgttaacgttaacttttgcaggatcaagtcccaacttcttgc 52297 Query: 401 agcagtacacatactgagatgcaaaa 426 ||||||| | |||||||| |||||| Sbjct: 52298 agcagtatgcgtactgagaagcaaaa 52323 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 496 gcaacagcaggaccaacacccatcacagctgg 527 ||||||||||||||||||||||| |||||||| Sbjct: 52463 gcaacagcaggaccaacacccattacagctgg 52494 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 428 cctcattaatctcaaaaaggtcgacatcattaatttgaagacc 470 ||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 52406 cctcattaatctcgaaaaggtcaacatcatctatttgaagacc 52448
>ref|NM_128874.2| Arabidopsis thaliana PED1 (PEROXISOME DEFECTIVE 1) AT2G33150 (PED1) mRNA, complete cds Length = 1852 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 1425 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 1366 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 1365 cggcgtttcatctcgt 1350 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 1229 actgagatgcaaatgcctcattgatctcaaa 1199
>gb|BC045119.1| Xenopus laevis acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase), mRNA (cDNA clone MGC:54026 IMAGE:5571615), complete cds Length = 1958 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 334 ggatgtccaagagcaattgcacctccattaacattg 369 ||||| ||||||||||| |||||||||||||||||| Sbjct: 1070 ggatgcccaagagcaatggcacctccattaacattg 1035
>gb|AF349530.1| Arabidopsis thaliana putative 3-ketoacyl-CoA thiolase (At2g33150) mRNA, complete cds Length = 1438 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 1298 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 1239 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 1238 cggcgtttcatctcgt 1223 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 1102 actgagatgcaaatgcctcattgatctcaaa 1072
>gb|AF327529.1| Arabidopsis thaliana putative 3-ketoacyl-CoA thiolase (At2g33150) mRNA, complete cds Length = 1752 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 1406 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 1347 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 1346 cggcgtttcatctcgt 1331 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 1210 actgagatgcaaatgcctcattgatctcaaa 1180
>gb|AY063720.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1389 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 1298 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 1239 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 1238 cggcgtttcatctcgt 1223 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 1102 actgagatgcaaatgcctcattgatctcaaa 1072
>gb|AY058176.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1693 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 1361 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 1302 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 1301 cggcgtttcatctcgt 1286 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 1166 actgagatgcaaatgcctcattgatctcaaa 1136
>dbj|AK222103.1| Arabidopsis thaliana mRNA for 3-ketoacyl-CoA thiolase, partial cds, clone: RAFL22-89-F24 Length = 1283 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 943 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 884 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 883 cggcgtttcatctcgt 868 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 747 actgagatgcaaatgcctcattgatctcaaa 717
>gb|AY052702.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1753 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 1426 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 1367 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 1366 cggcgtttcatctcgt 1351 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 1230 actgagatgcaaatgcctcattgatctcaaa 1200
>dbj|AB008854.1| Arabidopsis thaliana mRNA for 3-ketoacyl-CoA thiolase, complete cds Length = 1765 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 1406 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 1347 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 1346 cggcgtttcatctcgt 1331 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 1210 actgagatgcaaatgcctcattgatctcaaa 1180
>gb|AY087543.1| Arabidopsis thaliana clone 36488 mRNA, complete sequence Length = 1581 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| || | ||||||||| |||||||| || || Sbjct: 1374 gctgcacccatccccgtcccaatgcacattgacactactccaaaacggcagtctttacca 1315 Query: 277 cggcgcttcatctcgt 292 ||||| |||||||||| Sbjct: 1314 cggcgtttcatctcgt 1299 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaa 443 ||||||||||||| |||||||| |||||||| Sbjct: 1178 actgagatgcaaatgcctcattgatctcaaa 1148
>ref|NM_100351.2| Arabidopsis thaliana acetyl-CoA C-acyltransferase AT1G04710 mRNA, complete cds Length = 1588 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaaaaggtcgacatcatt 458 ||||||||||||| ||||| ||||||||||| | |||||| ||||| Sbjct: 1110 actgagatgcaaatgcctcgttaatctcaaacaagtcgacgtcatt 1065
>gb|AY099741.1| Arabidopsis thaliana putative acetyl-CoA acyltransferase (At1g04710) mRNA, complete cds Length = 1589 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaaaaggtcgacatcatt 458 ||||||||||||| ||||| ||||||||||| | |||||| ||||| Sbjct: 1110 actgagatgcaaatgcctcgttaatctcaaacaagtcgacgtcatt 1065
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 315 cgcacctgtggcacccaatggatgtccaagagcaattgcacctccattaacatt 368 ||||||||| ||||| | |||||||||||| ||||| ||||| ||||| ||||| Sbjct: 2490780 cgcacctgtagcaccaagtggatgtccaagtgcaatggcaccgccatttacatt 2490833
>gb|BT003415.1| Arabidopsis thaliana putative acetyl-CoA acyltransferase (At1g04710) mRNA, complete cds Length = 1363 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaaaaggtcgacatcatt 458 ||||||||||||| ||||| ||||||||||| | |||||| ||||| Sbjct: 1078 actgagatgcaaatgcctcgttaatctcaaacaagtcgacgtcatt 1033
>gb|AY085052.1| Arabidopsis thaliana clone 125847 mRNA, complete sequence Length = 1538 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 413 actgagatgcaaaagcctcattaatctcaaaaaggtcgacatcatt 458 ||||||||||||| ||||| ||||||||||| | |||||| ||||| Sbjct: 1089 actgagatgcaaatgcctcgttaatctcaaacaagtcgacgtcatt 1044
>gb|AF270323.1|AF270323 Staphylococcus epidermidis strain SR1 clone step.4008e02 genomic sequence Length = 3315 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 ggatgtccaagagcaattgcacctccattaacattgacttt 374 |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 1835 ggatgtcctagtgcaatcgcaccaccattaacattgacttt 1875
>gb|AF270092.1|AF270092 Staphylococcus epidermidis strain SR1 clone step.1048e05 genomic sequence Length = 2988 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 334 ggatgtccaagagcaattgcacctccattaacattgacttt 374 |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 2713 ggatgtcctagtgcaatcgcaccaccattaacattgacttt 2673
>gb|AF269804.1|AF269804 Staphylococcus epidermidis strain SR1 clone step.1023g10 genomic sequence Length = 3309 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 ggatgtccaagagcaattgcacctccattaacattgacttt 374 |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 3170 ggatgtcctagtgcaatcgcaccaccattaacattgacttt 3210
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 334 ggatgtccaagagcaattgcacctccattaacattgacttt 374 |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 27336 ggatgtcctagtgcaatcgcaccaccattaacattgacttt 27296
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 ggatgtccaagagcaattgcacctccattaacattgacttt 374 |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 2460467 ggatgtcctagtgcaatcgcaccaccattaacattgacttt 2460507
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Minus Query: 319 cctgtggcacccaatggatgtccaagagcaattgcacctccattaacattgacttt 374 ||||| ||||| ||||||||||| | ||||||||||| || || ||||||||||| Sbjct: 2920114 cctgttgcacctaatggatgtcccatggcaattgcaccgccgttcacattgacttt 2920059 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 325 gcacccaatggatgtccaagagcaattgcacctccatt 362 |||||||||||||| || || ||||||||||| ||||| Sbjct: 1448669 gcacccaatggatgacccagtgcaattgcaccgccatt 1448632
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 477 cttcactgctgctgggatagcaacagcaggaccaacacccatcacagc 524 ||||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 160953 cttcactgcagctggtattgctactgcaggaccaacacccataacagc 161000
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 493 atagcaacagcaggaccaacacccatc 519 |||||||||||||| |||||||||||| Sbjct: 229679 atagcaacagcaggtccaacacccatc 229653
>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170561 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 ggtttctttggaaagccagtta 153 |||||||||||||||||||||| Sbjct: 85010 ggtttctttggaaagccagtta 85031
>gb|AC154130.1| Tribolium castaneum BAC T.cast_C11O3 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 148539 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 gcacccaatggatgtccaagagcaat 350 |||||||| ||||||||||||||||| Sbjct: 40501 gcacccaaaggatgtccaagagcaat 40526
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 420 tgcaaaagcctcattaatctcaaaaaggtcgacatcat 457 |||||| || ||||||||||||||||| || ||||||| Sbjct: 2044715 tgcaaacgcttcattaatctcaaaaagatccacatcat 2044678
>gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, complete sequence Length = 215113 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 ggtttctttggaaagccagtta 153 |||||||||||||||||||||| Sbjct: 61178 ggtttctttggaaagccagtta 61157
>gb|AY458634.2| Uncultured bacterium 314 clone EBAC750-09G06 genomic sequence Length = 48824 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Plus Query: 334 ggatgtccaagagcaattgcacctccattaacattgactttt 375 ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 24345 ggatgaccaagagcaatagcaccaccatttacatttactttt 24386
>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence Length = 119933 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 ggtttctttggaaagccagtta 153 |||||||||||||||||||||| Sbjct: 66006 ggtttctttggaaagccagtta 65985
>emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein family, a novel pseudogene and a CpG island, complete sequence Length = 152623 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 tttgcatgagaaatagttacac 131 |||||||||||||||||||||| Sbjct: 31770 tttgcatgagaaatagttacac 31791
>emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on chromosome 9 Contains the 5' end of the CNTNAP3 gene for a contactin associated protein-like 3 and two CpG islands, complete sequence Length = 118564 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 tttgcatgagaaatagttacac 131 |||||||||||||||||||||| Sbjct: 87953 tttgcatgagaaatagttacac 87932
>ref|XM_963280.1| PREDICTED: Tribolium castaneum similar to CG4600-PA (LOC656773), mRNA Length = 1315 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 325 gcacccaatggatgtccaagagcaat 350 |||||||| ||||||||||||||||| Sbjct: 1073 gcacccaaaggatgtccaagagcaat 1048
>emb|X93015.1|BNGBHTPRE B.napus mRNA for glyoxysomal beta-ketoacyl-thiolase precursor Length = 1389 Score = 44.1 bits (22), Expect = 0.52 Identities = 61/74 (82%) Strand = Plus / Minus Query: 217 gctgcacccatcccagaacctatgcacatagaaattactccaaaccggcagtccttgcct 276 |||||||||||||| | || |||||||| |||| ||| ||||| || ||||| || || Sbjct: 1298 gctgcacccatccccgtcccaatgcacattgaaactaccccaaatcgacagtcttttccg 1239 Query: 277 cggcgcttcatctc 290 ||||| |||||||| Sbjct: 1238 cggcgtttcatctc 1225
>emb|X67696.1|CS3KCT C.sativus mRNA for 3-ketoacyl-CoA thiolase Length = 1709 Score = 44.1 bits (22), Expect = 0.52 Identities = 109/138 (78%) Strand = Plus / Minus Query: 418 gatgcaaaagcctcattaatctcaaaaaggtcgacatcattaatttgaagacccgcggcc 477 |||||||| |||||||| ||||||||||| || | ||| || | || ||| || || ||| Sbjct: 1125 gatgcaaatgcctcatttatctcaaaaagatcaatatcgttcagttcaagtccagcagcc 1066 Query: 478 ttcactgctgctgggatagcaacagcaggaccaacacccatcacagctggatcaactcca 537 || || || ||||| || || ||||| || ||||||||||| | ||| ||||| || || Sbjct: 1065 ttgacagcagctggaattgctacagccgggccaacacccatgatagcaggatccacaccc 1006 Query: 538 acggcagcaaagctcctg 555 || |||| |||| ||||| Sbjct: 1005 acagcagaaaaggtcctg 988 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 235 cctatgcacatagaaattactccaaaccggcagtccttgcctcggcgcttcatctc 290 ||||||||||| || || |||||||| || || || ||||| ||||| |||||||| Sbjct: 1308 cctatgcacattgatatgactccaaaacgacaatctttgccacggcgtttcatctc 1253
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 420 tgcaaaagcctcattaatctcaaaaaggtcgacatcat 457 |||||| || ||||||||||||||||| || ||||||| Sbjct: 2002965 tgcaaacgcttcattaatctcaaaaagatccacatcat 2002928
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 420 tgcaaaagcctcattaatctcaaaaaggtcgacatcat 457 |||||| || ||||||||||||||||| || ||||||| Sbjct: 2020400 tgcaaacgcttcattaatctcaaaaagatccacatcat 2020363
>gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, complete sequence Length = 158245 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 ggcagctacacaatttgcatga 118 |||||||||||||||||||||| Sbjct: 97474 ggcagctacacaatttgcatga 97495
>gb|AF009224.2|AF009224 Acinetobacter sp. ADP1 ben operon and cat operon, complete sequence Length = 18158 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 325 gcacccaatggatgtccaagagcaattgcacctccatt 362 |||||||||||||| || || ||||||||||| ||||| Sbjct: 17105 gcacccaatggatgacccagtgcaattgcaccgccatt 17068
>ref|XM_391843.2| PREDICTED: Apis mellifera similar to ENSANGP00000013285 (LOC408291), mRNA Length = 2355 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 ccaatggatgtccaagagcaat 350 |||||||||||||||||||||| Sbjct: 1419 ccaatggatgtccaagagcaat 1398
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 gcaattgcacctccattaacattgactttt 375 ||||||||||| ||||||||||| |||||| Sbjct: 725990 gcaattgcaccaccattaacatttactttt 725961
>emb|AL117376.28|HSDJ971B4 Human DNA sequence from clone RP5-971B4 on chromosome 20 Contains the 3' end of the C20orf23 gene for a novel protein similar to KIF1 type and other kinesin-like proteins, complete sequence Length = 162213 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cccatcccagaacctatgcac 243 ||||||||||||||||||||| Sbjct: 17699 cccatcccagaacctatgcac 17719
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 324 ggcacccaatggatgtccaagagcaattgcacctccattaacatt 368 |||||| ||||||||||| | ||||| ||||| ||||||||||| Sbjct: 2730969 ggcacctaatggatgtcctaacgcaatagcaccaccattaacatt 2730925
>emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chromosome 7, complete sequence Length = 155752 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtttctttggaaagccagtt 152 ||||||||||||||||||||| Sbjct: 55343 ggtttctttggaaagccagtt 55323
>gb|AC101702.11| Mus musculus chromosome 1, clone RP23-247G20, complete sequence Length = 178193 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gtttctttggaaagccagtta 153 ||||||||||||||||||||| Sbjct: 84812 gtttctttggaaagccagtta 84832
>emb|AL670959.8| Mouse DNA sequence from clone RP23-94L5 on chromosome 4, complete sequence Length = 262388 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggtttctttggaaagccagtt 152 ||||||||||||||||||||| Sbjct: 1600 ggtttctttggaaagccagtt 1620
>emb|AL627342.15| Mouse DNA sequence from clone RP23-281G20 on chromosome 4, complete sequence Length = 84122 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggtttctttggaaagccagtt 152 ||||||||||||||||||||| Sbjct: 83722 ggtttctttggaaagccagtt 83742
>ref|XM_750312.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g10720) partial mRNA Length = 1551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cagctacacaatttgcatga 118 |||||||||||||||||||| Sbjct: 1159 cagctacacaatttgcatga 1178
>gb|AC116570.3| Mus musculus BAC clone RP23-93O1 from chromosome 1, complete sequence Length = 213410 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ggtttctttggaaagccagt 151 |||||||||||||||||||| Sbjct: 105290 ggtttctttggaaagccagt 105309
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 acagcaggaccaacacccat 518 |||||||||||||||||||| Sbjct: 3721 acagcaggaccaacacccat 3702
>gb|AC122834.2| Mus musculus BAC clone RP23-183H9 from 15, complete sequence Length = 191019 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgagaagagtgctgacaca 311 |||||||||||||||||||| Sbjct: 117223 ttgagaagagtgctgacaca 117242
>emb|AL031275.1|HS10C16 Human DNA sequence from clone RP1-10C16 on chromosome 1q24.1-24.3 Contains two novel genes and a CpG island, complete sequence Length = 109821 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ataagatttttatatccaag 28 |||||||||||||||||||| Sbjct: 9562 ataagatttttatatccaag 9543
>emb|CR378670.1| Photobacterium profundum SS9; segment 8/12 Length = 348672 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tcgacatcattaatttgaag 467 |||||||||||||||||||| Sbjct: 93351 tcgacatcattaatttgaag 93370
>emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 8/17 Length = 349652 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 tgcgggatcgagatccaacttttt 398 ||||||||||| |||||||||||| Sbjct: 195428 tgcgggatcgatatccaacttttt 195451
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tacacaatttgcatgagaaa 122 |||||||||||||||||||| Sbjct: 84948 tacacaatttgcatgagaaa 84929
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tacacaatttgcatgagaaa 122 |||||||||||||||||||| Sbjct: 1437 tacacaatttgcatgagaaa 1418
>gb|AC161592.2| Mus musculus BAC clone RP24-252H17 from chromosome 13, complete sequence Length = 186026 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gtttctttggaaagccagtt 152 |||||||||||||||||||| Sbjct: 46894 gtttctttggaaagccagtt 46875
>gb|AC159284.2| Mus musculus BAC clone RP23-318K10 from chromosome 6, complete sequence Length = 188553 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 acagcaggaccaacacccat 518 |||||||||||||||||||| Sbjct: 9575 acagcaggaccaacacccat 9594
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 tcctgtagattccaagaatt 570 |||||||||||||||||||| Sbjct: 469436 tcctgtagattccaagaatt 469417
>emb|AL953898.20| Zebrafish DNA sequence from clone CH211-232K7 in linkage group 5, complete sequence Length = 176162 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 caactttttggagcagtaca 409 |||||||||||||||||||| Sbjct: 148642 caactttttggagcagtaca 148623
>emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in linkage group 17, complete sequence Length = 198736 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 caactttttggagcagtaca 409 |||||||||||||||||||| Sbjct: 7067 caactttttggagcagtaca 7086
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 gcaacagcaggaccaacacc 515 |||||||||||||||||||| Sbjct: 1435706 gcaacagcaggaccaacacc 1435725
>gb|AC153947.3| Mus musculus 10 BAC RP24-408C20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209414 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tttttatatccaagaagaat 34 |||||||||||||||||||| Sbjct: 173279 tttttatatccaagaagaat 173298
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 8.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 328 cccaatggatgtccaagagcaattgcacctccattaacattgactttt 375 |||| |||||||||||| || || || || ||||||||||| |||||| Sbjct: 295491 cccactggatgtccaagtgctatagctccaccattaacatttactttt 295444
>emb|AL928825.6| Zebrafish DNA sequence from clone CH211-284P13, complete sequence Length = 199207 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 aagacctttctgtgtagcaa 592 |||||||||||||||||||| Sbjct: 198693 aagacctttctgtgtagcaa 198674
>emb|AL591976.1| Listeria monocytogenes strain EGD, complete genome, segment 4/12 Length = 250050 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cgttgataagatttttatat 23 |||||||||||||||||||| Sbjct: 243628 cgttgataagatttttatat 243609
>emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chromosome 2, complete sequence Length = 179361 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gataattgagaacaatggtg 97 |||||||||||||||||||| Sbjct: 111875 gataattgagaacaatggtg 111856 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,897,042 Number of Sequences: 3902068 Number of extensions: 4897042 Number of successful extensions: 84756 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 84234 Number of HSP's gapped (non-prelim): 523 length of query: 600 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 577 effective length of database: 17,143,297,704 effective search space: 9891682775208 effective search space used: 9891682775208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
