ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32k14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185755.2| Oryza sativa (japonica cultivar-group), mRNA 535 e-149
2dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 535 e-149
3dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 535 e-149
4gb|BT019196.1| Zea mays clone Contig868.F mRNA sequence 432 e-118
5gb|AY108648.1| Zea mays PCO090155 mRNA sequence 432 e-118
6gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence 392 e-106
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 297 2e-77
8dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 297 2e-77
9emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for ... 94 6e-16
10ref|NM_114072.2| Arabidopsis thaliana ATP binding / hydrogen-tra... 88 4e-14
11gb|AY091685.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, com... 88 4e-14
12gb|AY037176.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, com... 88 4e-14
13emb|BX823850.1|CNS0A6JD Arabidopsis thaliana Full-length cDNA Co... 88 4e-14
14gb|DQ493959.1| Musa acuminata vacuolar ATPase subunit H mRNA, pa... 84 6e-13
15emb|AJ698924.1| Populus deltoides x Populus maximowiczii partial... 84 6e-13
16emb|BX823221.1|CNS0A6OK Arabidopsis thaliana Full-length cDNA Co... 80 1e-11
17gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete s... 78 4e-11
18gb|AY225129.1| Suaeda maritima subsp. salsa putative vacuolar AT... 66 1e-07
19emb|AL356013.1|ATF4M19 Arabidopsis thaliana DNA chromosome 3, BA... 62 2e-06
20gb|AY544986.1| Litopenaeus vannamei Kazal-type proteinase inhibi... 44 0.53
21gb|U46779.1|CPU46779 Cavia porcellus granulocyte-macrophage stim... 44 0.53
22gb|BC084672.1| Xenopus laevis MGC82842 protein, mRNA (cDNA clone... 42 2.1
23emb|X95549.1|XLFIMB1GN X.laevis FIM-B.1 gene 42 2.1
24emb|BX119969.4| Mouse DNA sequence from clone RP23-58N9 on chrom... 42 2.1
25gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome... 42 2.1
26gb|AC136426.2| Homo sapiens chromosome 5 clone CTD-2008N14, comp... 42 2.1
27emb|AL591977.1| Listeria monocytogenes strain EGD, complete geno... 42 2.1
28emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chr... 42 2.1
29gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 42 2.1
30gb|AC137970.10| Mus musculus chromosome 3, clone RP23-438E13, co... 40 8.3
31gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 40 8.3
32gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7,... 40 8.3
33gb|AC150855.6| Bos taurus BAC CH240-472P12 (Children's Hospital... 40 8.3
34gb|AC115865.9| Mus musculus chromosome 3, clone RP24-314I8, comp... 40 8.3
35gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, comp... 40 8.3
36ref|XM_821192.1| Trypanosoma brucei TREU927 clone RPCI93-3A7 hyp... 40 8.3
37gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosom... 40 8.3
38emb|Z84474.1|HS111M5 Human DNA sequence from clone RP1-111M5 on ... 40 8.3
39emb|BX119924.8| Human DNA sequence from clone DASS-46L4 on chrom... 40 8.3
40emb|BX000360.7| Human DNA sequence from clone DAQB-5M14 on chrom... 40 8.3
41emb|AL662871.9| Human DNA sequence from clone XXbac-322C17 on ch... 40 8.3
42emb|AL662859.5| Human DNA sequence from clone XXbac-196D17 on ch... 40 8.3
43gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence 40 8.3
44emb|CR759942.12| Human DNA sequence from clone DAAP-182E11 on ch... 40 8.3
45gb|AC069242.13| Homo sapiens 3 BAC RP11-554J1 (Roswell Park Canc... 40 8.3
46gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, comple... 40 8.3
47gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, co... 40 8.3 
>ref|NM_185755.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1694

 Score =  535 bits (270), Expect = e-149
 Identities = 414/462 (89%)
 Strand = Plus / Minus

                                                                        
Query: 134  ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 193
            |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 1466 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 1407

                                                                        
Query: 194  cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 253
            |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 1406 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 1347

                                                                        
Query: 254  gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 313
             ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 1287

                                                                        
Query: 314  ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 373
            |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 1286 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 1227

                                                                        
Query: 374  gatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtcttt 433
             ||||||||||||||||| ||||| ||| | || ||||| ||||||||| ||||||||||
Sbjct: 1226 aatctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtcttt 1167

                                                                        
Query: 434  gtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatga 493
            ||||||||||||||| ||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 1166 gtgcattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatga 1107

                                                                        
Query: 494  gctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaa 553
             |||||| |||| ||||| |||||||| || | |||||| |||||||| |||||||| ||
Sbjct: 1106 actcaacttcttaaggttgtctttgagtcctatttctagctgattcagcgcatctaataa 1047

                                                      
Query: 554  atcctcatcactccatgcttgagctttcagattctgtactat 595
            |||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1046 atcctcatcagtccatgcttgagctttcaaattctgtactat 1005
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>dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D11, full
            insert sequence
          Length = 1694

 Score =  535 bits (270), Expect = e-149
 Identities = 414/462 (89%)
 Strand = Plus / Minus

                                                                        
Query: 134  ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 193
            |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 1466 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 1407

                                                                        
Query: 194  cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 253
            |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 1406 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 1347

                                                                        
Query: 254  gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 313
             ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 1287

                                                                        
Query: 314  ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 373
            |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 1286 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 1227

                                                                        
Query: 374  gatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtcttt 433
             ||||||||||||||||| ||||| ||| | || ||||| ||||||||| ||||||||||
Sbjct: 1226 aatctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtcttt 1167

                                                                        
Query: 434  gtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatga 493
            ||||||||||||||| ||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 1166 gtgcattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatga 1107

                                                                        
Query: 494  gctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaa 553
             |||||| |||| ||||| |||||||| || | |||||| |||||||| |||||||| ||
Sbjct: 1106 actcaacttcttaaggttgtctttgagtcctatttctagctgattcagcgcatctaataa 1047

                                                      
Query: 554  atcctcatcactccatgcttgagctttcagattctgtactat 595
            |||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1046 atcctcatcagtccatgcttgagctttcaaattctgtactat 1005
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>dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120K21, full
            insert sequence
          Length = 1764

 Score =  535 bits (270), Expect = e-149
 Identities = 414/462 (89%)
 Strand = Plus / Minus

                                                                        
Query: 134  ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 193
            |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 1467 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 1408

                                                                        
Query: 194  cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 253
            |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 1407 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 1348

                                                                        
Query: 254  gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 313
             ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 1288

                                                                        
Query: 314  ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 373
            |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 1287 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 1228

                                                                        
Query: 374  gatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtcttt 433
             ||||||||||||||||| ||||| ||| | || ||||| ||||||||| ||||||||||
Sbjct: 1227 aatctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtcttt 1168

                                                                        
Query: 434  gtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatga 493
            ||||||||||||||| ||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 1167 gtgcattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatga 1108

                                                                        
Query: 494  gctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaa 553
             |||||| |||| ||||| |||||||| || | |||||| |||||||| |||||||| ||
Sbjct: 1107 actcaacttcttaaggttgtctttgagtcctatttctagctgattcagcgcatctaataa 1048

                                                      
Query: 554  atcctcatcactccatgcttgagctttcagattctgtactat 595
            |||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1047 atcctcatcagtccatgcttgagctttcaaattctgtactat 1006
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>gb|BT019196.1| Zea mays clone Contig868.F mRNA sequence
          Length = 944

 Score =  432 bits (218), Expect = e-118
 Identities = 392/450 (87%)
 Strand = Plus / Minus

                                                                       
Query: 133 cctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagt 192
           |||||||||| || |||||||| ||||| ||||||||||||||||| |||| ||  |  |
Sbjct: 675 cctgcaggaaactggcatactttgcgccaaggaagagcctctgcacacagatcaatgcat 616

                                                                       
Query: 193 tcttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttga 252
           | ||||||||||| | ||| || || |||||||||||||||||||||||||| |||||||
Sbjct: 615 ttttcctcacttcagtgttctcatgattcatgagtttcatgactcggtccttagccttga 556

                                                                       
Query: 253 ggtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagc 312
           ||||||||||||| |  |||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 555 ggtctgccaccacgattcggccagatggatggtactgaaggaattgtgagaggtcgtagc 496

                                                                       
Query: 313 aggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgta 372
           |||| || |||||||| ||||||||  |||||||||| |||| |||||| || || |  |
Sbjct: 495 aggccacggcaagagcggtggtgtcacttgatgtgtcaatgattgtcatgagaactctca 436

                                                                       
Query: 373 ggatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctt 432
           | ||||||||||||||||| ||||| ||  | || ||||| ||||||||| |||| ||||
Sbjct: 435 gaatctggaaatcattttcttcaaaattgttaatgttctcacgccagaaacttggatctt 376

                                                                       
Query: 433 tgtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatg 492
           |||||||||||||||| || ||||| |||||||| ||||||||||||||||||||||| |
Sbjct: 375 tgtgcattggagaccagtccagatgaccaagaagaacttgctgtttgtacttatcaaagg 316

                                                                       
Query: 493 agctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaaca 552
           | |||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 315 aactcaacttcttgaggttttctttgagtcccacttctagttgattcagagcatctaaca 256

                                         
Query: 553 aatcctcatcactccatgcttgagctttca 582
            |||||||||| ||||||||||||||||||
Sbjct: 255 gatcctcatcagtccatgcttgagctttca 226
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>gb|AY108648.1| Zea mays PCO090155 mRNA sequence
          Length = 1795

 Score =  432 bits (218), Expect = e-118
 Identities = 392/450 (87%)
 Strand = Plus / Minus

                                                                        
Query: 133  cctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagt 192
            |||||||||| || |||||||| ||||| ||||||||||||||||| |||| ||  |  |
Sbjct: 1499 cctgcaggaaactggcatactttgcgccaaggaagagcctctgcacacagatcaatgcat 1440

                                                                        
Query: 193  tcttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttga 252
            | ||||||||||| | ||| || || |||||||||||||||||||||||||| |||||||
Sbjct: 1439 ttttcctcacttcagtgttctcatgattcatgagtttcatgactcggtccttggccttga 1380

                                                                        
Query: 253  ggtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagc 312
            ||||||||||||| |  |||||||| || |||||||| ||||||||||||||||| ||||
Sbjct: 1379 ggtctgccaccacgattcggccagatggatggtactggaggaactgtgagaggtcgtagc 1320

                                                                        
Query: 313  aggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgta 372
            |||| || |||||||| ||||||||  |||||||||| |||| |||||| || || || |
Sbjct: 1319 aggccacggcaagagcggtggtgtcacttgatgtgtcaatgattgtcatgagaactcgca 1260

                                                                        
Query: 373  ggatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctt 432
            | |||||||||||||| || ||||| ||  | || ||||| ||||||||| |||| ||||
Sbjct: 1259 gaatctggaaatcattctcttcaaaattgttaatgttctcacgccagaaacttggatctt 1200

                                                                        
Query: 433  tgtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatg 492
            |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |
Sbjct: 1199 tgtgcattggagaccagtcaagatgaccaagaagaacttgctgtttgtacttatcaaagg 1140

                                                                        
Query: 493  agctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaaca 552
            | |||||| |||||||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 1139 aactcaacttcttgaggttttctttgagtcccacctctagttgattcagagcatctaaca 1080

                                          
Query: 553  aatcctcatcactccatgcttgagctttca 582
             |||||||||| ||||||||||||||||||
Sbjct: 1079 gatcctcatcagtccatgcttgagctttca 1050
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>gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence
          Length = 1360

 Score =  392 bits (198), Expect = e-106
 Identities = 387/450 (86%)
 Strand = Plus / Minus

                                                                        
Query: 133  cctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagt 192
            |||||||||| || |||||||| ||||| ||||||||||||||||| |||| ||  |  |
Sbjct: 1088 cctgcaggaaactggcatactttgcgccaaggaagagcctctgcacacagatcaatgcat 1029

                                                                        
Query: 193  tcttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttga 252
            | ||||||||||| | ||| || || |||||||||||||||||||||||||| |||||||
Sbjct: 1028 ttttcctcacttcagtgttctcatgattcatgagtttcatgactcggtccttagccttga 969

                                                                        
Query: 253  ggtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagc 312
            ||||||||||||| |  |||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 968  ggtctgccaccacgattcggccagatggatggtactgaaggaattgtgagaggtcgtagc 909

                                                                        
Query: 313  aggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgta 372
            |||| || |||||||| ||||||||  |||||||||| |||| |||||| || || |  |
Sbjct: 908  aggccacggcaagagcggtggtgtcacttgatgtgtcaatgattgtcatgagaactctca 849

                                                                        
Query: 373  ggatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctt 432
            | ||||||||||||||||| ||||| ||  | || ||||| ||||||||| |||| ||||
Sbjct: 848  gaatctggaaatcattttcttcaaaattgttaatgttctcacgccagaaacttggatctt 789

                                                                        
Query: 433  tgtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatg 492
            |||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||  
Sbjct: 788  tgtgcattggagaccagtccagatgaccaagaagaacttgctgtttgtacttatcaaaga 729

                                                                        
Query: 493  agctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaaca 552
            | | |||| |||||||||| |||||||| ||||||||||||   ||||| ||||||||||
Sbjct: 728  aacgcaacttcttgaggttttctttgagtcccacttctagtgatttcagagcatctaaca 669

                                          
Query: 553  aatcctcatcactccatgcttgagctttca 582
             |||||||||| ||||||||||||||||||
Sbjct: 668  gatcctcatcagtccatgcttgagctttca 639
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  297 bits (150), Expect = 2e-77
 Identities = 222/246 (90%)
 Strand = Plus / Minus

                                                                            
Query: 134      ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 193
                |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 21768446 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 21768387

                                                                            
Query: 194      cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 253
                |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 21768386 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 21768327

                                                                            
Query: 254      gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 313
                 ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 21768326 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 21768267

                                                                            
Query: 314      ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 373
                |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 21768266 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 21768207

                      
Query: 374      gatctg 379
                 |||||
Sbjct: 21768206 aatctg 21768201



 Score =  186 bits (94), Expect = 6e-44
 Identities = 160/182 (87%)
 Strand = Plus / Minus

                                                                            
Query: 377      ctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttgtg 436
                ||||||||||||||| ||||| ||| | || ||||| ||||||||| |||||||||||||
Sbjct: 21767698 ctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtctttgtg 21767639

                                                                            
Query: 437      cattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgagct 496
                |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| ||
Sbjct: 21767638 cattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatgaact 21767579

                                                                            
Query: 497      caacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaaatc 556
                |||| |||| ||||| |||||||| || | |||||| |||||||| |||||||| |||||
Sbjct: 21767578 caacttcttaaggttgtctttgagtcctatttctagctgattcagcgcatctaataaatc 21767519

                  
Query: 557      ct 558
                ||
Sbjct: 21767518 ct 21767517



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 556      cctcatcactccatgcttgagctttcagattctgtactat 595
                |||||||| |||||||||||||||||| ||||||||||||
Sbjct: 21766957 cctcatcagtccatgcttgagctttcaaattctgtactat 21766918
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score =  297 bits (150), Expect = 2e-77
 Identities = 222/246 (90%)
 Strand = Plus / Minus

                                                                         
Query: 134   ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 193
             |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 85629 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 85570

                                                                         
Query: 194   cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 253
             |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 85569 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 85510

                                                                         
Query: 254   gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 313
              ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 85509 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 85450

                                                                         
Query: 314   ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 373
             |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 85449 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 85390

                   
Query: 374   gatctg 379
              |||||
Sbjct: 85389 aatctg 85384



 Score =  186 bits (94), Expect = 6e-44
 Identities = 160/182 (87%)
 Strand = Plus / Minus

                                                                         
Query: 377   ctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttgtg 436
             ||||||||||||||| ||||| ||| | || ||||| ||||||||| |||||||||||||
Sbjct: 84881 ctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtctttgtg 84822

                                                                         
Query: 437   cattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgagct 496
             |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| ||
Sbjct: 84821 cattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatgaact 84762

                                                                         
Query: 497   caacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaaatc 556
             |||| |||| ||||| |||||||| || | |||||| |||||||| |||||||| |||||
Sbjct: 84761 caacttcttaaggttgtctttgagtcctatttctagctgattcagcgcatctaataaatc 84702

               
Query: 557   ct 558
             ||
Sbjct: 84701 ct 84700



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 556   cctcatcactccatgcttgagctttcagattctgtactat 595
             |||||||| |||||||||||||||||| ||||||||||||
Sbjct: 84140 cctcatcagtccatgcttgagctttcaaattctgtactat 84101
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>emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase
            subunit H (vha-H gene)
          Length = 1735

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 137/167 (82%)
 Strand = Plus / Minus

                                                                        
Query: 374  gatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtcttt 433
            |||||| |||||||||||||||||||| || || || || ||||||||    |  |||||
Sbjct: 1286 gatctgaaaatcattttcctcaaagttggtaatgttatcacgccagaagaaagtatcttt 1227

                                                                        
Query: 434  gtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatga 493
            ||||| ||| ||||||||||||||||||||||| |||| |||||| || || ||||||||
Sbjct: 1226 gtgcactggggaccaatcaagatggccaagaagaacttcctgtttatatttgtcaaatga 1167

                                                           
Query: 494  gctcaacctcttgaggttctctttgagacccacttctagttgattca 540
             |||| | |||||| ||| || || |  ||  |||||||||||||||
Sbjct: 1166 actcagcttcttgatgttttccttcatcccttcttctagttgattca 1120
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>ref|NM_114072.2| Arabidopsis thaliana ATP binding / hydrogen-transporting ATP
            synthase, rotational mechanism / hydrogen-transporting
            ATPase, rotational mechanism AT3G42050 mRNA, complete cds
          Length = 1884

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 375  atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 434
            |||||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||
Sbjct: 1287 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttg 1228

                                                                        
Query: 435  tgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgag 494
            ||||||||   ||| |||||||||||||| ||||| |  || || || |||||||| || 
Sbjct: 1227 tgcattgggttccagtcaagatggccaaggagcacctcttgcttatatttatcaaaggaa 1168

                                                                        
Query: 495  ctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaaa 554
            |||||  ||||||  || ||||| || ||  |||||||||| ||||||||||| | ||| 
Sbjct: 1167 ctcaatttcttgatcttgtcttttagcccttcttctagttggttcagtgcatccagcaag 1108

                                
Query: 555  tcctcatcactccatgcttg 574
            ||||| ||||||||||||||
Sbjct: 1107 tcctcgtcactccatgcttg 1088



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 207  gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 259
            ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 1455 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 1403
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>gb|AY091685.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, complete cds
          Length = 1326

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 375  atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 434
            |||||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||
Sbjct: 1079 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttg 1020

                                                                        
Query: 435  tgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgag 494
            ||||||||   ||| |||||||||||||| ||||| |  || || || |||||||| || 
Sbjct: 1019 tgcattgggttccagtcaagatggccaaggagcacctcttgcttatatttatcaaaggaa 960

                                                                        
Query: 495  ctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaaa 554
            |||||  ||||||  || ||||| || ||  |||||||||| ||||||||||| | ||| 
Sbjct: 959  ctcaatttcttgatcttgtcttttagcccttcttctagttggttcagtgcatccagcaag 900

                                
Query: 555  tcctcatcactccatgcttg 574
            ||||| ||||||||||||||
Sbjct: 899  tcctcgtcactccatgcttg 880



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 207  gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 259
            ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 1247 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 1195
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>gb|AY037176.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, complete cds
          Length = 1704

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 375  atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 434
            |||||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||
Sbjct: 1263 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttg 1204

                                                                        
Query: 435  tgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgag 494
            ||||||||   ||| |||||||||||||| ||||| |  || || || |||||||| || 
Sbjct: 1203 tgcattgggttccagtcaagatggccaaggagcacctcttgcttatatttatcaaaggaa 1144

                                                                        
Query: 495  ctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaaa 554
            |||||  ||||||  || ||||| || ||  |||||||||| ||||||||||| | ||| 
Sbjct: 1143 ctcaatttcttgatcttgtcttttagcccttcttctagttggttcagtgcatccagcaag 1084

                                
Query: 555  tcctcatcactccatgcttg 574
            ||||| ||||||||||||||
Sbjct: 1083 tcctcgtcactccatgcttg 1064



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 207  gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 259
            ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 1431 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 1379
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>emb|BX823850.1|CNS0A6JD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS83ZB01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 754

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Minus

                                                                       
Query: 375 atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 434
           |||||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||
Sbjct: 267 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttg 208

                                                                       
Query: 435 tgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgag 494
           ||||||||   ||| |||||||||||||| ||||| |  || || || |||||||| || 
Sbjct: 207 tgcattgggttccagtcaagatggccaaggagcacctcttgcttatatttatcaaaggaa 148

                                                                       
Query: 495 ctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaaa 554
           |||||  ||||||  || ||||| || ||  |||||||||| ||||||||||| | ||| 
Sbjct: 147 ctcaatttcttgatcttgtcttttagcccttcttctagttggttcagtgcatccagcaag 88

                               
Query: 555 tcctcatcactccatgcttg 574
           ||||| ||||||||||||||
Sbjct: 87  tcctcgtcactccatgcttg 68



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 207 gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 259
           ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 435 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 383
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>gb|DQ493959.1| Musa acuminata vacuolar ATPase subunit H mRNA, partial cds
          Length = 317

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 174/218 (79%)
 Strand = Plus / Minus

                                                                       
Query: 363 aggacacgtaggatctggaaatcattttcctcaaagttagtgatattctctcgccagaaa 422
           |||||||| |||||||||||||| ||||| ||||| || || ||||| || |||||||| 
Sbjct: 240 aggacacgcaggatctggaaatcgttttcttcaaaatttgtaatattttcacgccagaat 181

                                                                       
Query: 423 tttgggtctttgtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtac 482
             ||| || |||||||| ||| |||| |||||||| |||||||| |||| ||| || || 
Sbjct: 180 cctggatccttgtgcataggataccagtcaagatgaccaagaaggacttcctgcttatat 121

                                                                       
Query: 483 ttatcaaatgagctcaacctcttgaggttctctttgagacccacttctagttgattcagt 542
           |||||||| || || ||  | || | ||  || || || ||  ||||||| ||||||| |
Sbjct: 120 ttatcaaaggaacttaaagttttaatgtgttccttcagtccatcttctagctgattcaat 61

                                                 
Query: 543 gcatctaacaaatcctcatcactccatgcttgagcttt 580
           || || || ||||||||||||||||| || ||||||||
Sbjct: 60  gcttccaataaatcctcatcactccaggcctgagcttt 23
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>emb|AJ698924.1| Populus deltoides x Populus maximowiczii partial mRNA for putative
           vacuolar ATPase subunit H
          Length = 392

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                       
Query: 375 atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 434
           |||||||||||||| || ||||| ||||| ||||| || |||||||||   || ||||||
Sbjct: 106 atctggaaatcattctcttcaaaattagttatattttcacgccagaaagcaggatctttg 47

                                     
Query: 435 tgcattggagaccaatcaagatggcc 460
           ||||| ||||||||||||||||||||
Sbjct: 46  tgcataggagaccaatcaagatggcc 21
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>emb|BX823221.1|CNS0A6OK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS12ZE12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1696

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 160/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 375  atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 434
            |||||||| || || |||||||||   |||| |||||| ||||||| ||| |  || |||
Sbjct: 1213 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagagattggtctccttg 1154

                                                                        
Query: 435  tgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgag 494
            ||||||||   ||| |||||||||||||| ||||| |  || || || |||||||| || 
Sbjct: 1153 tgcattgggttccagtcaagatggccaaggagcacctcttgcttatatttatcaaaggaa 1094

                                                                        
Query: 495  ctcaacctcttgaggttctctttgagacccacttctagttgattcagtgcatctaacaaa 554
            |||||  ||||||  || ||||| || ||  |||||||||| ||||||||||| | ||| 
Sbjct: 1093 ctcaatttcttgatcttgtcttttagcccttcttctagttggttcagtgcatccagcaag 1034

                                
Query: 555  tcctcatcactccatgcttg 574
            ||||| ||||||||||||||
Sbjct: 1033 tcctcgtcactccatgcttg 1014



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 207  gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 259
            ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 1381 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 1329
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>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence
          Length = 119208

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 98/115 (85%), Gaps = 2/115 (1%)
 Strand = Plus / Minus

                                                                         
Query: 377   ctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttggg-tctttgt 435
             |||||||||||  || ||||| || || ||||| |||||||| |||| |||| |||||||
Sbjct: 66265 ctggaaatcatgctcttcaaaattggttatattttctcgcca-aaatatgggatctttgt 66207

                                                                    
Query: 436   gcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaa 490
             |||| ||||||||||| |||| ||||||||| ||||  || ||||||||||||||
Sbjct: 66206 gcatgggagaccaatccagattgccaagaagaacttcttgcttgtacttatcaaa 66152



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 556   cctcatcactccatgcttgagctttca 582
             ||||||||||||||||||| |||||||
Sbjct: 65237 cctcatcactccatgcttgtgctttca 65211
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>gb|AY225129.1| Suaeda maritima subsp. salsa putative vacuolar ATPase subunit H
            protein mRNA, complete cds
          Length = 1969

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 374  gatctggaaatcattttcctcaaagttagtgatattctctcgcca 418
            |||||||||||||||||||||||||||  |||||||||| |||||
Sbjct: 1252 gatctggaaatcattttcctcaaagttcttgatattctcccgcca 1208
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>emb|AL356013.1|ATF4M19 Arabidopsis thaliana DNA chromosome 3, BAC clone F4M19
          Length = 94342

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 136/171 (79%)
 Strand = Plus / Plus

                                                                         
Query: 377   ctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttgtg 436
             |||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||||
Sbjct: 19265 ctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttgtg 19324

                                                                         
Query: 437   cattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgagct 496
             ||||||   ||| |||||||||||||| ||||| |  || || || |||||||| || ||
Sbjct: 19325 cattgggttccagtcaagatggccaaggagcacctcttgcttatatttatcaaaggaact 19384

                                                                
Query: 497   caacctcttgaggttctctttgagacccacttctagttgattcagtgcatc 547
             |||  ||||||  || ||||| || ||  |||||||||| |||||||||||
Sbjct: 19385 caatttcttgatcttgtcttttagcccttcttctagttggttcagtgcatc 19435



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 207   gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 259
             ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 18973 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 19025
to top
>gb|AY544986.1| Litopenaeus vannamei Kazal-type proteinase inhibitor mRNA, complete
           cds
          Length = 1279

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 240 tcctttgccttgaggtctgcca 261
           ||||||||||||||||||||||
Sbjct: 34  tcctttgccttgaggtctgcca 13
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>gb|U46779.1|CPU46779 Cavia porcellus granulocyte-macrophage stimulation factor mRNA,
           partial cds
          Length = 420

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 498 aacctcttgaggttctctttga 519
           ||||||||||||||||||||||
Sbjct: 392 aacctcttgaggttctctttga 371
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>gb|BC084672.1| Xenopus laevis MGC82842 protein, mRNA (cDNA clone MGC:98234
           IMAGE:4884385), complete cds
          Length = 2879

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 17  gacaagaaattgcagaggtct 37
           |||||||||||||||||||||
Sbjct: 733 gacaagaaattgcagaggtct 753
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>emb|X95549.1|XLFIMB1GN X.laevis FIM-B.1 gene
          Length = 7026

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 37   ttacattctcaatcactgttt 57
            |||||||||||||||||||||
Sbjct: 3795 ttacattctcaatcactgttt 3815
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>emb|BX119969.4| Mouse DNA sequence from clone RP23-58N9 on chromosome 13, complete
             sequence
          Length = 52119

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   agcagggagttcttcctcact 203
             |||||||||||||||||||||
Sbjct: 10469 agcagggagttcttcctcact 10489
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>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence
          Length = 184868

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   agcagggagttcttcctcact 203
             |||||||||||||||||||||
Sbjct: 55598 agcagggagttcttcctcact 55578
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>gb|AC136426.2| Homo sapiens chromosome 5 clone CTD-2008N14, complete sequence
          Length = 121099

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 377   ctggaaatcattttcctcaaa 397
             |||||||||||||||||||||
Sbjct: 54238 ctggaaatcattttcctcaaa 54258
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>emb|AL591977.1| Listeria monocytogenes strain EGD, complete genome, segment 5/12
          Length = 270050

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 574   gagctttcagattctgtacta 594
             |||||||||||||||||||||
Sbjct: 73419 gagctttcagattctgtacta 73399
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>emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chromosome 2, complete
             sequence
          Length = 195457

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    ttacattctcaatcactgttt 57
             |||||||||||||||||||||
Sbjct: 58836 ttacattctcaatcactgttt 58856
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>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 574    gagctttcagattctgtacta 594
              |||||||||||||||||||||
Sbjct: 964114 gagctttcagattctgtacta 964094
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>gb|AC137970.10| Mus musculus chromosome 3, clone RP23-438E13, complete sequence
          Length = 212827

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    tggccaagaagcacttgctg 475
              ||||||||||||||||||||
Sbjct: 200388 tggccaagaagcacttgctg 200369
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>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    gagttcttcctcacttcggc 208
              ||||||||||||||||||||
Sbjct: 425713 gagttcttcctcacttcggc 425732
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>gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7, complete sequence
          Length = 175357

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   gagttcttcctcacttcggc 208
             ||||||||||||||||||||
Sbjct: 77529 gagttcttcctcacttcggc 77548
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>gb|AC150855.6| Bos taurus  BAC CH240-472P12 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 168955

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    acttcatataaatacaaaactttg 122
             ||||||||||| ||||||||||||
Sbjct: 71330 acttcatataactacaaaactttg 71353
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>gb|AC115865.9| Mus musculus chromosome 3, clone RP24-314I8, complete sequence
          Length = 200362

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    tggccaagaagcacttgctg 475
              ||||||||||||||||||||
Sbjct: 104516 tggccaagaagcacttgctg 104497
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>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence
          Length = 274518

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    tggccaagaagcacttgctg 475
              ||||||||||||||||||||
Sbjct: 125908 tggccaagaagcacttgctg 125889
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>ref|XM_821192.1| Trypanosoma brucei TREU927 clone RPCI93-3A7 hypothetical protein
            (Tb927.6.1070) partial mRNA
          Length = 2796

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  gagttcttcctcacttcggc 208
            ||||||||||||||||||||
Sbjct: 1935 gagttcttcctcacttcggc 1916
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>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence
          Length = 187246

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    tggccaagaagcacttgctg 475
              ||||||||||||||||||||
Sbjct: 135209 tggccaagaagcacttgctg 135190
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>emb|Z84474.1|HS111M5 Human DNA sequence from clone RP1-111M5 on chromosome 6p21.3 Contains an
              RPL13 (60S Ribosomal protein L13, BBC1) pseudogene, a zinc
              finger protein pseudogene, the 3' end of the RFP gene for
              ret finger protein, four CpG islands, ESTs, STSs and GSSs,
              complete sequence
          Length = 107526

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    cagggagttcttcctcactt 204
              ||||||||||||||||||||
Sbjct: 103329 cagggagttcttcctcactt 103348
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>emb|BX119924.8| Human DNA sequence from clone DASS-46L4 on chromosome 6, complete
             sequence
          Length = 92058

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cagggagttcttcctcactt 204
             ||||||||||||||||||||
Sbjct: 79868 cagggagttcttcctcactt 79887
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>emb|BX000360.7| Human DNA sequence from clone DAQB-5M14 on chromosome 6 Contains the
             ZNF463P pseudogene for zinc finger protein 463, the HCG14
             gene for HLA complex group 14, the 3' end of the RFP gene
             for ret finger protein and 1 CpG island, complete sequence
          Length = 44401

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cagggagttcttcctcactt 204
             ||||||||||||||||||||
Sbjct: 40171 cagggagttcttcctcactt 40190
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>emb|AL662871.9| Human DNA sequence from clone XXbac-322C17 on chromosome 6 contains the
             RFP gene for ret finger protein gene, a zinc finger
             protein pseudogene, a novel protein and three CpG islands,
             complete sequence
          Length = 103158

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cagggagttcttcctcactt 204
             ||||||||||||||||||||
Sbjct: 47081 cagggagttcttcctcactt 47100
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>emb|AL662859.5| Human DNA sequence from clone XXbac-196D17 on chromosome 6 contains a
             zinc finger protein pseudogene, the RFP gene for ret
             finger protein and three CpG islands, complete sequence
          Length = 61233

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cagggagttcttcctcactt 204
             ||||||||||||||||||||
Sbjct: 45244 cagggagttcttcctcactt 45263
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>gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence
          Length = 147908

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     tcaatcactgtttcaccattctga 68
              ||||||||||||||||| ||||||
Sbjct: 147751 tcaatcactgtttcacctttctga 147774
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>emb|CR759942.12| Human DNA sequence from clone DAAP-182E11 on chromosome 6, complete
             sequence
          Length = 69422

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cagggagttcttcctcactt 204
             ||||||||||||||||||||
Sbjct: 43984 cagggagttcttcctcactt 44003
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>gb|AC069242.13| Homo sapiens 3 BAC RP11-554J1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184664

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    aaactggacaagaaattgca 30
             ||||||||||||||||||||
Sbjct: 21156 aaactggacaagaaattgca 21137
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>gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, complete sequence
          Length = 152081

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   cttcatataaatacaaaact 119
             ||||||||||||||||||||
Sbjct: 97020 cttcatataaatacaaaact 97001
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>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence
          Length = 197546

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 453    agatggccaagaagcacttg 472
              ||||||||||||||||||||
Sbjct: 105026 agatggccaagaagcacttg 105045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,668,109
Number of Sequences: 3902068
Number of extensions: 5668109
Number of successful extensions: 108061
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107904
Number of HSP's gapped (non-prelim): 147
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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