>WNT7A_PLEJO (P28138) Protein Wnt-7a (Fragment)|
          Length = 123

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 72  PTMAHNNKKLEPVFLSLAQSLAAVRTYHTTNIQQQKTPYKC---AVRQTISPLGHRCCST 242
           P  A  NK+  P FL + + L+ ++   T  +  +K+P  C    V  ++   G  C  T
Sbjct: 35  PVRASRNKR--PTFLKIKKPLSYLKPMDTDLVYIEKSPNYCEEDPVTGSVGTQGRMCNKT 92

Query: 243 TRHSSSGD 266
            +HSS  D
Sbjct: 93  AQHSSGCD 100

>GP110_MOUSE (Q8VEC3) G-protein coupled receptor 110 precursor|
          Length = 908

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = -1

Query: 363 PPACYSRQGSCCTLRKG---GCCCSL*SAMQSSQFCHRS*SAELWSNIYAQE 217
           PP+C   Q +CC    G    C CSL    QS  FC R   A++W      E
Sbjct: 112 PPSCLDPQ-NCCLHTTGPVPSCNCSLRGLRQSVNFCER---AKVWGTFEIDE 159

>YDB4_SCHPO (Q10357) Hypothetical protein C22E12.04 in chromosome I|
          Length = 297

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 432 SIHEGNSMVWCWCGPLRAIDRHRPPACYSRQGSCCTLRKGGCC 304
           S++EG+S     C    +    +P  C   + SCC+ +K  CC
Sbjct: 218 SVNEGSSC----CSKKDSSPSEKPSCCSQEKKSCCSSKKPSCC 256



 Score = 28.1 bits (61), Expect(2) = 3.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 372 RHRPPACYSRQGSCCTLRKGGCC 304
           + +   C S++ SCC+  K GCC
Sbjct: 242 QEKKSCCSSKKPSCCSQEKKGCC 264



 Score = 21.2 bits (43), Expect(2) = 3.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -3

Query: 541 KFLWCKHMALMRWLMRITACSSSRTSLEEKSVMC 440
           K LW +H  L       + CS   +S  EK   C
Sbjct: 207 KSLWTEHAELKSVNEGSSCCSKKDSSPSEKPSCC 240

>RSP5_YEAST (P39940) E3 ubiquitin--protein ligase RSP5 (EC 6.3.2.-)|
          Length = 809

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 213 SPLGHRCCSTTRHSSSGDKIGSTASPTKDYNNNHPS 320
           +P GH   S+T  SS+    G + S T++++ +HPS
Sbjct: 147 APSGHTASSSTNTSSTTRTNGHSTSSTRNHSTSHPS 182

>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 980

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 19/80 (23%), Positives = 35/80 (43%)
 Frame = +1

Query: 379 GS*WSAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSV 558
           G+ W   +P       + ++ +S + P      K +Q S S    VP +   + S   S 
Sbjct: 494 GASWEGLSPVRQAGMQHLQVQSS-SCPQSSPEFKGSQASLSDSLGVPASAADQDSYSTSS 552

Query: 559 ARHSMAISSPNAAARPSLVL 618
           A   +  +SP+   +PS++L
Sbjct: 553 AEEELEFTSPDVEKKPSMIL 572

>BUR2_YEAST (Q05949) Protein BUR2 (Bypass UAS requirement protein 2)|
           (Chromosome stability protein 4)
          Length = 395

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +3

Query: 252 SSSGD--KIGSTASPTKDYNNNHPSSKYNSCLVWSNMLEDGGDQWL 383
           SSSGD  K  +   PT + +    SS +N+  +W +++E   +QW+
Sbjct: 5   SSSGDVKKFQAVPKPTSNASPPPASSGFNARTLWPDLIETPENQWV 50

>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein|
           3)
          Length = 118

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 357 ACYSRQGSCCTLRKGGCCCSL*SAMQSSQFCHR 259
           +C S  G CC+   GGCC S     +    CHR
Sbjct: 59  SCGSSSGGCCSSGGGGCCLS--HHRRRRSHCHR 89

>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein|
           2) (Small proline-rich-like epidermal differentiation
           complex protein 2A)
          Length = 118

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 357 ACYSRQGSCCTLRKGGCCCSL*SAMQSSQFCHR 259
           +C S  G CC+   GGCC S     +    CHR
Sbjct: 59  SCGSSSGGCCSSGGGGCCLS--HHRRRRSHCHR 89

>WNT7A_ALOVU (P28105) Protein Wnt-7a (Fragment)|
          Length = 123

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 72  PTMAHNNKKLEPVFLSLAQSLAAVRTYHTTNIQQQKTPYKC---AVRQTISPLGHRCCST 242
           P   H NK+  PVFL + + L+  +   T  +  +K+P  C    +  ++   G  C  T
Sbjct: 35  PVRTHRNKR--PVFLKIKKPLSYRKPMVTDLVYIEKSPNYCEEDPITGSVGTQGRMCNKT 92

Query: 243 TRHSSSGD 266
           +  ++S D
Sbjct: 93  SSQNNSCD 100

>UCRP_BOVIN (O02741) Ubiquitin cross-reactive protein (Interferon-stimulated|
           gene product 17) (BoUCRP)
          Length = 153

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 162 NIQQQKTPYKCAVRQTISPLGHRCCSTTRHSSSGDKIGSTASPTKDYNNNHPSSKY---N 332
           N + + +PY+  ++QT++ L  + C   R  +    +     P  D    HP  +Y    
Sbjct: 84  NDKGRSSPYEVQLKQTVAELKQQVCQKERVQADQFWLSFEGRPMDD---EHPLEEYGLMK 140

Query: 333 SCLVWSNMLEDGG 371
            C V+ N+   GG
Sbjct: 141 GCTVFMNLRLRGG 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,120,213
Number of Sequences: 219361
Number of extensions: 1865925
Number of successful extensions: 5153
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5147
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)